Clone Information

BLAST Search Result

Clone Name	bastl04a09
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	R13L2_ARATH (Q9STE5) Putative disease resistance RPP13-like prot...	40	0.003
2	DRL4_ARATH (Q9SX38) Putative disease resistance protein At1g50180	39	0.009
3	R13L3_ARATH (Q9STE7) Putative disease resistance RPP13-like prot...	39	0.009
4	RPP13_ARATH (Q9M667) Disease resistance protein RPP13 (Resistanc...	38	0.016
5	RGA4_SOLBU (Q7XA39) Putative disease resistance protein RGA4 (RG...	36	0.047
6	RGA1_SOLBU (Q7XA42) Putative disease resistance protein RGA1 (RG...	36	0.061
7	DRL13_ARATH (Q9XIF0) Putative disease resistance protein At1g59780	35	0.10
8	RGA2_SOLBU (Q7XBQ9) Disease resistance protein RGA2 (RGA2-blb) (...	35	0.10
9	RP8L1_ARATH (O04093) Putative disease resistance protein RPP8-li...	34	0.18
10	RPOB_PSESM (Q889X8) DNA-directed RNA polymerase beta chain (EC 2...	34	0.23
11	RGA3_SOLBU (Q7XA40) Putative disease resistance protein RGA3 (RG...	34	0.23
12	RPOB_PSEU2 (Q4ZMN7) DNA-directed RNA polymerase beta chain (EC 2...	33	0.30
13	RPOB_PSE14 (Q48D29) DNA-directed RNA polymerase beta chain (EC 2...	33	0.30
14	DRL12_ARATH (Q9LQ54) Probable disease resistance protein At1g596...	33	0.52
15	RP8L2_ARATH (Q9MAG6) Probable disease resistance RPP8-like prote...	32	0.67
16	MUTS2_THETN (Q8R9D0) MutS2 protein	32	0.67
17	RAD50_YEAST (P12753) DNA repair protein RAD50 (EC 3.6.-.-) (153 ...	32	0.88
18	ATG11_CANGA (Q6FRH2) Autophagy-related protein 11	32	1.2
19	SYS_RICCN (Q92GA7) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--...	31	1.5
20	DRL7_ARATH (Q8W474) Probable disease resistance protein At1g58390	31	1.5
21	GVPC1_HALSA (P24574) Gas vesicle protein C 1	31	2.0
22	VATI_PYRAB (Q9UXU2) V-type ATP synthase subunit I (EC 3.6.3.14) ...	30	2.6
23	RX24L_ARATH (Q9C646) Probable disease resistance protein RXW24L	30	2.6
24	DHYS_HUMAN (P49366) Deoxyhypusine synthase (EC 2.5.1.46) (DHS)	30	2.6
25	DHYS_BOVIN (Q6EWQ6) Deoxyhypusine synthase (EC 2.5.1.46) (DHS)	30	2.6
26	MYO3_SCHPO (O14157) Myosin type-2 heavy chain 2 (Myosin type II ...	30	3.3
27	DHYS_RAT (Q6AY53) Deoxyhypusine synthase (EC 2.5.1.46) (DHS)	30	3.3
28	SYS_RICTY (Q68VW6) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--...	30	3.3
29	RBCC1_HUMAN (Q8TDY2) RB1-inducible coiled-coil protein 1	30	3.3
30	FBN1_HUMAN (P35555) Fibrillin-1 precursor	30	3.3
31	DRL9_ARATH (Q8W3K0) Probable disease resistance protein At1g58602	30	4.4
32	FBN1_PIG (Q9TV36) Fibrillin-1 precursor	30	4.4
33	FBN1_MOUSE (Q61554) Fibrillin-1 precursor	30	4.4
34	FBN1_BOVIN (P98133) Fibrillin-1 precursor (MP340)	30	4.4
35	RPM1_ARATH (Q39214) Disease resistance protein RPM1 (Resistance ...	29	5.7
36	MED9_YEAST (P33308) RNA polymerase II mediator complex subunit 9...	29	5.7
37	THAS_PIG (P47787) Thromboxane-A synthase (EC 5.3.99.5) (TXA synt...	29	7.5
38	ILVB_METJA (Q57725) Probable acetolactate synthase large subunit...	29	7.5
39	ENH2_HUMAN (Q9N2J9) HERV-H_3q26 provirus ancestral Env polyprote...	29	7.5
40	PUMA_PARUN (O61308) 227 kDa spindle- and centromere-associated p...	28	9.7
41	SYS_RICPR (Q9ZCG5) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--...	28	9.7
42	PFD6_DROME (Q9VW56) Probable prefoldin subunit 6	28	9.7
43	ENH1_PANTR (P61559) ERV-H1 provirus ancestral Env polyprotein pr...	28	9.7
44	CCD39_HUMAN (Q9UFE4) Coiled-coil domain-containing protein 39	28	9.7
45	COL39_CAEEL (Q09455) Cuticle collagen 39 precursor	28	9.7

>R13L2_ARATH (Q9STE5) Putative disease resistance RPP13-like protein 2|
          Length = 847

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 17/71 (23%), Positives = 43/71 (60%)
 Frame = +1

Query: 265 LLGKLATLMGEEFAKLKNLRKEVKYISDELSSMKDALESLADVDVLDKQTASWRDVVREM 444
           ++GK+   + EE   L  ++ +++ +  EL+ ++  L+++   D  D+ +  W  +V ++
Sbjct: 9   VVGKIDNYLIEEAPMLIGVKDDLEELKTELTCIQVYLKNVEVCDKEDEVSKEWTKLVLDI 68

Query: 445 SYDIEDIIDDF 477
           +YD+ED++D +
Sbjct: 69  AYDVEDVLDTY 79

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>DRL4_ARATH (Q9SX38) Putative disease resistance protein At1g50180|
          Length = 839

 Score = 38.5 bits (88), Expect = 0.009
 Identities = 22/75 (29%), Positives = 39/75 (52%)
 Frame = +1

Query: 253 VMNSLLGKLATLMGEEFAKLKNLRKEVKYISDELSSMKDALESLADVDVLDKQTASWRDV 432
           +++  + KL  L+ EE   L  +  +VK + DEL  +   L+   +     ++  +W   
Sbjct: 5   IVSVTVQKLGQLLLEEPLFLFGIGDQVKQLQDELKRLNCFLKDADEKQHESERVRNWVAG 64

Query: 433 VREMSYDIEDIIDDF 477
           +RE SYD EDI++ F
Sbjct: 65  IREASYDAEDILEAF 79

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>R13L3_ARATH (Q9STE7) Putative disease resistance RPP13-like protein 3|
          Length = 847

 Score = 38.5 bits (88), Expect = 0.009
 Identities = 21/82 (25%), Positives = 44/82 (53%)
 Frame = +1

Query: 232 MVSASTGVMNSLLGKLATLMGEEFAKLKNLRKEVKYISDELSSMKDALESLADVDVLDKQ 411
           MV A TG +   L K+   +  E   L  ++ +++ +  EL+ +   L+ +   +  D+ 
Sbjct: 1   MVDAVTGFV---LNKIGGYLINEVLALMGVKDDLEELKTELTCIHGYLKDVEAREREDEV 57

Query: 412 TASWRDVVREMSYDIEDIIDDF 477
           +  W  +V +++YDIED++D +
Sbjct: 58  SKEWTKLVLDIAYDIEDVLDTY 79

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>RPP13_ARATH (Q9M667) Disease resistance protein RPP13 (Resistance to|
           Peronospora parasitica protein 13)
          Length = 835

 Score = 37.7 bits (86), Expect = 0.016
 Identities = 15/71 (21%), Positives = 41/71 (57%)
 Frame = +1

Query: 265 LLGKLATLMGEEFAKLKNLRKEVKYISDELSSMKDALESLADVDVLDKQTASWRDVVREM 444
           ++GK+   + EE +    ++++++ +  EL+ +   L+ +   +  D+ +  W  +V + 
Sbjct: 9   VVGKIGNYLIEEASMFMAVKEDLEELKTELTCIHGYLKDVEAREREDEVSKEWSKLVLDF 68

Query: 445 SYDIEDIIDDF 477
           +YD+ED++D +
Sbjct: 69  AYDVEDVLDTY 79

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>RGA4_SOLBU (Q7XA39) Putative disease resistance protein RGA4 (RGA4-blb)|
          Length = 988

 Score = 36.2 bits (82), Expect = 0.047
 Identities = 15/70 (21%), Positives = 36/70 (51%)
 Frame = +1

Query: 265 LLGKLATLMGEEFAKLKNLRKEVKYISDELSSMKDALESLADVDVLDKQTASWRDVVREM 444
           LL  L + +G++   +    KE + +S   S+++  L+   +  + DK   +W   +   
Sbjct: 9   LLENLTSFIGDKLVLIFGFEKECEKLSSVFSTIQAVLQDAQEKQLKDKAIENWLQKLNSA 68

Query: 445 SYDIEDIIDD 474
           +Y+++DI+ +
Sbjct: 69  AYEVDDILGE 78

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>RGA1_SOLBU (Q7XA42) Putative disease resistance protein RGA1 (RGA3-blb)|
          Length = 1025

 Score = 35.8 bits (81), Expect = 0.061
 Identities = 16/71 (22%), Positives = 36/71 (50%)
 Frame = +1

Query: 265 LLGKLATLMGEEFAKLKNLRKEVKYISDELSSMKDALESLADVDVLDKQTASWRDVVREM 444
           +L  L + +  E   L   + E + +S   S+++  LE   +  + DK   +W   +   
Sbjct: 9   VLDNLTSFLKGELVLLFGFQDEFQRLSSMFSTIQAVLEDAQEKQLNDKPLENWLQKLNAA 68

Query: 445 SYDIEDIIDDF 477
           +Y+++DI+D++
Sbjct: 69  TYEVDDILDEY 79

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>DRL13_ARATH (Q9XIF0) Putative disease resistance protein At1g59780|
          Length = 906

 Score = 35.0 bits (79), Expect = 0.10
 Identities = 19/72 (26%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
 Frame = +1

Query: 274 KLATLMGEEFAKLKNLRKEVKYISDELSSMKDALESLADVDVLDKQTASWRDV---VREM 444
           KL  L+ +E+ + + + +++  + D+L  +   +  L+D D   +  A  R+    ++E+
Sbjct: 17  KLWKLLSQEYERFQGVEEQITELRDDLKML---MAFLSDADAKKQTRALARNCLEEIKEI 73

Query: 445 SYDIEDIIDDFM 480
           +YD EDII+ F+
Sbjct: 74  TYDAEDIIEIFL 85

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>RGA2_SOLBU (Q7XBQ9) Disease resistance protein RGA2 (RGA2-blb) (Blight|
           resistance protein RPI)
          Length = 970

 Score = 35.0 bits (79), Expect = 0.10
 Identities = 16/71 (22%), Positives = 36/71 (50%)
 Frame = +1

Query: 265 LLGKLATLMGEEFAKLKNLRKEVKYISDELSSMKDALESLADVDVLDKQTASWRDVVREM 444
           LL  L + +  E   L   + E + +S   S+++  LE   +  + +K   +W   +   
Sbjct: 9   LLDNLTSFLKGELVLLFGFQDEFQRLSSMFSTIQAVLEDAQEKQLNNKPLENWLQKLNAA 68

Query: 445 SYDIEDIIDDF 477
           +Y+++DI+D++
Sbjct: 69  TYEVDDILDEY 79

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>RP8L1_ARATH (O04093) Putative disease resistance protein RPP8-like protein 1|
          Length = 821

 Score = 34.3 bits (77), Expect = 0.18
 Identities = 20/77 (25%), Positives = 41/77 (53%)
 Frame = +1

Query: 250 GVMNSLLGKLATLMGEEFAKLKNLRKEVKYISDELSSMKDALESLADVDVLDKQTASWRD 429
           GV+   + KL  L+  E A+L  + ++V  +  +L  ++  L+         ++  ++ +
Sbjct: 4   GVVLFGVHKLWELLNRESARLNGIGEQVDGLKRQLGRLQSLLKDADAKKHESERVRNFLE 63

Query: 430 VVREMSYDIEDIIDDFM 480
            VR++ YD EDII+ F+
Sbjct: 64  DVRDIVYDAEDIIESFL 80

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>RPOB_PSESM (Q889X8) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
            beta subunit) (Transcriptase beta chain) (RNA polymerase
            beta subunit)
          Length = 1357

 Score = 33.9 bits (76), Expect = 0.23
 Identities = 20/60 (33%), Positives = 32/60 (53%)
 Frame = +1

Query: 226  GIMVSASTGVMNSLLGKLATLMGEEFAKLKNLRKEVKYISDELSSMKDALESLADVDVLD 405
            G ++    G+    LG+    M EE  K+  LRK +  I +E+   ++ALE L D ++LD
Sbjct: 1127 GQILETHLGLAAKGLGEKINRMLEEQRKVIELRKFLNEIYNEIGGRQEALEDLTDNEILD 1186

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>RGA3_SOLBU (Q7XA40) Putative disease resistance protein RGA3 (RGA1-blb)|
           (Blight resistance protein B149)
          Length = 947

 Score = 33.9 bits (76), Expect = 0.23
 Identities = 18/70 (25%), Positives = 32/70 (45%)
 Frame = +1

Query: 265 LLGKLATLMGEEFAKLKNLRKEVKYISDELSSMKDALESLADVDVLDKQTASWRDVVREM 444
           LL  L   +  E   +    KE K +S   S ++  LE   +  +  K   +W   +   
Sbjct: 9   LLDNLTFFIQGELGLVFGFEKEFKKLSSMFSMIQAVLEDAQEKQLKYKAIKNWLQKLNVA 68

Query: 445 SYDIEDIIDD 474
           +Y+++DI+DD
Sbjct: 69  AYEVDDILDD 78

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>RPOB_PSEU2 (Q4ZMN7) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
            beta subunit) (Transcriptase beta chain) (RNA polymerase
            beta subunit)
          Length = 1357

 Score = 33.5 bits (75), Expect = 0.30
 Identities = 19/60 (31%), Positives = 32/60 (53%)
 Frame = +1

Query: 226  GIMVSASTGVMNSLLGKLATLMGEEFAKLKNLRKEVKYISDELSSMKDALESLADVDVLD 405
            G ++    G+    LG+    M EE  K+  LRK +  I +E+   +++LE L D ++LD
Sbjct: 1127 GQILETHLGLAAKGLGEKINRMLEEQRKVAELRKFLNEIYNEIGGRQESLEDLTDNEILD 1186

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>RPOB_PSE14 (Q48D29) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
            beta subunit) (Transcriptase beta chain) (RNA polymerase
            beta subunit)
          Length = 1357

 Score = 33.5 bits (75), Expect = 0.30
 Identities = 19/60 (31%), Positives = 32/60 (53%)
 Frame = +1

Query: 226  GIMVSASTGVMNSLLGKLATLMGEEFAKLKNLRKEVKYISDELSSMKDALESLADVDVLD 405
            G ++    G+    LG+    M EE  K+  LRK +  I +E+   +++LE L D ++LD
Sbjct: 1127 GQILETHLGLAAKGLGEKINRMLEEQRKVAELRKFLNEIYNEIGGRQESLEDLTDNEILD 1186

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>DRL12_ARATH (Q9LQ54) Probable disease resistance protein At1g59620 (CW9)|
          Length = 695

 Score = 32.7 bits (73), Expect = 0.52
 Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
 Frame = +1

Query: 274 KLATLMGEEFAKLKNLRKEVKYISDELSSMKDALESLADVDVLDKQTASWRDVVREMS-- 447
           KL  L+  E  + + ++K+   +  +L+ ++  LE   D D    Q+A   + V+E+   
Sbjct: 12  KLWDLLVRESDRFQGVKKQFNELRSDLNKLRCFLE---DADAKKHQSAMVSNTVKEVKEI 68

Query: 448 -YDIEDIIDDFM 480
            YD EDII+ F+
Sbjct: 69  VYDTEDIIETFL 80

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>RP8L2_ARATH (Q9MAG6) Probable disease resistance RPP8-like protein 2|
          Length = 1271

 Score = 32.3 bits (72), Expect = 0.67
 Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
 Frame = +1

Query: 274 KLATLMGEEFAKLKNLRKEVKYISDELSSMKDALESLADVDVLDKQTASWRDV---VREM 444
           KL  L+  E A+L  + ++V  +  +L  ++  L+   D D    +T   R+    V+++
Sbjct: 12  KLWELLSRESARLNGIDEQVDGLKRQLGRLQSLLK---DADAKKNETERVRNFLEDVKDI 68

Query: 445 SYDIEDIIDDFM 480
            YD +DII+ F+
Sbjct: 69  VYDADDIIESFL 80

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>MUTS2_THETN (Q8R9D0) MutS2 protein|
          Length = 790

 Score = 32.3 bits (72), Expect = 0.67
 Identities = 16/56 (28%), Positives = 32/56 (57%)
 Frame = +1

Query: 301 FAKLKNLRKEVKYISDELSSMKDALESLADVDVLDKQTASWRDVVREMSYDIEDII 468
           + +++ L+KEV+ + +EL   K  LES  D  +L +     R++++E     E++I
Sbjct: 536 YQEVERLKKEVEVLKEELEKEKRKLESQKD-KILKEAKEKAREIIKEAKQTAEEVI 590

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>RAD50_YEAST (P12753) DNA repair protein RAD50 (EC 3.6.-.-) (153 kDa protein)|
          Length = 1312

 Score = 32.0 bits (71), Expect = 0.88
 Identities = 18/53 (33%), Positives = 27/53 (50%)
 Frame = +1

Query: 307 KLKNLRKEVKYISDELSSMKDALESLADVDVLDKQTASWRDVVREMSYDIEDI 465
           +LK+L    K IS+ELS    + + +  VD L  Q     D +RE+   I D+
Sbjct: 805 ELKDLENSSKTISEELSIYNTSEDGIQTVDELRDQQRKMNDSLRELRKTISDL 857

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>ATG11_CANGA (Q6FRH2) Autophagy-related protein 11|
          Length = 1110

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 10/72 (13%)
 Frame = +1

Query: 277 LATLMGEEFAKLKNLRKEVKYISDELSSMKDALESLADV----------DVLDKQTASWR 426
           L +L G+  +KLK ++KE+   +D+  S+++ +E+L ++            + K   S  
Sbjct: 259 LKSLDGKVNSKLKQIKKELDSYADQRKSIQNEIENLKNIKDMKNDDNELHEMQKSFDSIA 318

Query: 427 DVVREMSYDIED 462
           D VR+ S DI D
Sbjct: 319 DTVRKASRDILD 330

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>SYS_RICCN (Q92GA7) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)|
           (SerRS)
          Length = 425

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 15/50 (30%), Positives = 34/50 (68%)
 Frame = +1

Query: 253 VMNSLLGKLATLMGEEFAKLKNLRKEVKYISDELSSMKDALESLADVDVL 402
           V + +LG +A+  GEEF   + L+++VK+I+++L +++  L +  +++ L
Sbjct: 53  VKSKILGNMASKSGEEF---EGLQRDVKHINEKLEALEQDLNNNNELNEL 99

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>DRL7_ARATH (Q8W474) Probable disease resistance protein At1g58390|
          Length = 613

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
 Frame = +1

Query: 274 KLATLMGEEFAKLKNLRKEVKYISDELSSMKDALESLADVDVLDKQTASWRDVVREMS-- 447
           KL  L+ +E  + + +  +V  +  +L+ +   L+   D D     TA  R+VV E+   
Sbjct: 12  KLWDLLSQECEQFQGVEDQVTGLKRDLNLLSSFLK---DADAKKHTTAVVRNVVEEIKEI 68

Query: 448 -YDIEDIIDDFM 480
            YD EDII+ ++
Sbjct: 69  VYDAEDIIETYL 80

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>GVPC1_HALSA (P24574) Gas vesicle protein C 1|
          Length = 382

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 4/44 (9%)
 Frame = +1

Query: 292 GEEFA-KLKNLRKEVKYISDELSSMKDALESLADV---DVLDKQ 411
           G+EFA ++ +LR ++    D +  M+DA E+ AD+   D+ DKQ
Sbjct: 67  GDEFAAEVDHLRADIDAQRDVIREMQDAFEAYADIFATDIADKQ 110

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>VATI_PYRAB (Q9UXU2) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase|
           subunit I)
          Length = 659

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 12/43 (27%), Positives = 27/43 (62%)
 Frame = +1

Query: 256 MNSLLGKLATLMGEEFAKLKNLRKEVKYISDELSSMKDALESL 384
           +  L+  +   +GE   K++ +  EV  +++E+S++KD+L +L
Sbjct: 98  IEELIKDVEKFLGEAEPKIREVESEVSRLNNEISALKDSLNAL 140

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>RX24L_ARATH (Q9C646) Probable disease resistance protein RXW24L|
          Length = 899

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 15/69 (21%), Positives = 34/69 (49%)
 Frame = +1

Query: 274 KLATLMGEEFAKLKNLRKEVKYISDELSSMKDALESLADVDVLDKQTASWRDVVREMSYD 453
           KL   + +E+ + K +  +V  +   L+ +K  L+       + +      + ++++ YD
Sbjct: 10  KLWDRLSQEYDQFKGVEDQVTELKSNLNLLKSFLKDADAKKHISEMVRHCVEEIKDIVYD 69

Query: 454 IEDIIDDFM 480
            EDII+ F+
Sbjct: 70  TEDIIETFI 78

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>DHYS_HUMAN (P49366) Deoxyhypusine synthase (EC 2.5.1.46) (DHS)|
          Length = 369

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
 Frame = +1

Query: 109 STSPSGNCMLLLHCFSNLLRCIACITRERR*ILVQPEMTGIMVSASTGVMNSLLGKLA-T 285
           S  P  +C + L   SNL   I+   RE    LVQ  M  ++V+ + GV   L+  LA T
Sbjct: 90  SRRPLTSCTIFLGYTSNL---ISSGIRETIRYLVQHNMVDVLVTTAGGVEEDLIKCLAPT 146

Query: 286 LMGEEFAKLKNLRK 327
            +GE   + K LR+
Sbjct: 147 YLGEFSLRGKELRE 160

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>DHYS_BOVIN (Q6EWQ6) Deoxyhypusine synthase (EC 2.5.1.46) (DHS)|
          Length = 369

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 8/110 (7%)
 Frame = +1

Query: 109 STSPSGNCMLLLHCFSNLLRCIACITRERR*ILVQPEMTGIMVSASTGVMNSLLGKLA-T 285
           S  P   C + L   SNL   I+   RE    LVQ  M  ++V+ + GV    +  LA T
Sbjct: 90  SRRPLTGCTIFLGYTSNL---ISSGIRETIRYLVQHNMVDVLVTTAGGVEEDFIKCLAPT 146

Query: 286 LMGEEFAKLKNLRK-------EVKYISDELSSMKDALESLADVDVLDKQT 414
            +GE   + K LR+        +   +D     +D L  + D  VL++ T
Sbjct: 147 YLGEFSLRGKELRENGINRIGNLLVPNDNYCKFEDWLMPILDQMVLEQNT 196

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>MYO3_SCHPO (O14157) Myosin type-2 heavy chain 2 (Myosin type II heavy chain 2)|
          Length = 2104

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 22/90 (24%), Positives = 46/90 (51%), Gaps = 7/90 (7%)
 Frame = +1

Query: 214  PEMTGIMVSASTGVMNS---LLGKLATLMG--EEFAKLKNLR-KEVKYISDELSSMKDAL 375
            PE T  +    +G +NS   +    +T +   ++  +LK+L  KE   +S+ +  + + L
Sbjct: 1090 PEKTHNINDVKSGPLNSDENIYSTSSTTLSILKDVQELKSLHTKEANQLSERIKEISEML 1149

Query: 376  E-SLADVDVLDKQTASWRDVVREMSYDIED 462
            E S+A  + L ++ +   D++  + Y I+D
Sbjct: 1150 EQSIATEEKLRRKNSELCDIIEALKYQIQD 1179

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>DHYS_RAT (Q6AY53) Deoxyhypusine synthase (EC 2.5.1.46) (DHS)|
          Length = 369

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
 Frame = +1

Query: 109 STSPSGNCMLLLHCFSNLLRCIACITRERR*ILVQPEMTGIMVSASTGVMNSLLGKLA-T 285
           S  P   C + L   SNL   I+   RE    LVQ  M  ++V+ + GV   L+  LA T
Sbjct: 90  SRRPLTGCTIFLGYTSNL---ISSGIRETIRYLVQHNMVDVLVTTAGGVEEDLIKCLAPT 146

Query: 286 LMGEEFAKLKNLRK 327
            +GE   + K LR+
Sbjct: 147 YLGEFSLRGKELRE 160

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>SYS_RICTY (Q68VW6) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)|
           (SerRS)
          Length = 425

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 25/99 (25%), Positives = 52/99 (52%), Gaps = 2/99 (2%)
 Frame = +1

Query: 172 IACITRERR*I--LVQPEMTGIMVSASTGVMNSLLGKLATLMGEEFAKLKNLRKEVKYIS 345
           IA + RE+R I  L+Q          +  V + +LG + +  GEEF   + L+++V +I+
Sbjct: 30  IAMLDREKRKITSLIQE------FQHARKVKSKILGNMVSKSGEEF---EELQRDVNHIN 80

Query: 346 DELSSMKDALESLADVDVLDKQTASWRDVVREMSYDIED 462
           ++L  ++  L++  +++ L     +  D   E+ Y I++
Sbjct: 81  EKLEELEQTLDNNNELNELLNMLPNIPD--EEVPYGIDE 117

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>RBCC1_HUMAN (Q8TDY2) RB1-inducible coiled-coil protein 1|
          Length = 1594

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 15/74 (20%), Positives = 39/74 (52%)
 Frame = +1

Query: 247  TGVMNSLLGKLATLMGEEFAKLKNLRKEVKYISDELSSMKDALESLADVDVLDKQTASWR 426
            + ++ + L K+ +L  + F   KNL++++  +  +L S   ALE   D + + +Q   + 
Sbjct: 1148 SNILKAELNKVTSLHNQAFEIEKNLKEQIIELQSKLDSELSALERQKD-EKITQQEEKYE 1206

Query: 427  DVVREMSYDIEDII 468
             +++ +  D + ++
Sbjct: 1207 AIIQNLEKDRQKLV 1220

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>FBN1_HUMAN (P35555) Fibrillin-1 precursor|
          Length = 2871

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
 Frame = +2

Query: 68   LTTCYRAYVGSAVHLPL---HRETACCCSIVSA 157
            L TC+  Y      LP+   HR  ACCCS+ +A
Sbjct: 955  LETCFLRYEDEECTLPIAGRHRMDACCCSVGAA 987

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>DRL9_ARATH (Q8W3K0) Probable disease resistance protein At1g58602|
          Length = 1138

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
 Frame = +1

Query: 268 LGKLATLMGEEFAKLKNLRKEVKYISDELSSMKDALESLADVDVLDKQTASWRDVVREMS 447
           + KL  L+  E+   + +  +V  +  +L+ +K  L+   D D     +A  R  V E+ 
Sbjct: 10  VNKLWDLLSHEYTLFQGVEDQVAELKSDLNLLKSFLK---DADAKKHTSALVRYCVEEIK 66

Query: 448 ---YDIEDIIDDFM 480
              YD ED+++ F+
Sbjct: 67  DIVYDAEDVLETFV 80

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>FBN1_PIG (Q9TV36) Fibrillin-1 precursor|
          Length = 2871

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
 Frame = +2

Query: 68   LTTCYRAYVGSAVHLPL---HRETACCCSIVSA 157
            L TC+  Y      LP+   HR  ACCCS+ +A
Sbjct: 955  LETCFLRYEDEECTLPVVGRHRMDACCCSVGAA 987

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>FBN1_MOUSE (Q61554) Fibrillin-1 precursor|
          Length = 2871

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
 Frame = +2

Query: 68   LTTCYRAYVGSAVHLPL---HRETACCCSIVSA 157
            L TC+  Y      LP+   HR  ACCCS+ +A
Sbjct: 955  LETCFLKYDDEECTLPIAGRHRMDACCCSVGAA 987

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>FBN1_BOVIN (P98133) Fibrillin-1 precursor (MP340)|
          Length = 2871

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
 Frame = +2

Query: 68   LTTCYRAYVGSAVHLPL---HRETACCCSIVSA 157
            L TC+  Y      LP+   HR  ACCCS+ +A
Sbjct: 955  LETCFLRYEDEECTLPVAGRHRMDACCCSVGAA 987

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>RPM1_ARATH (Q39214) Disease resistance protein RPM1 (Resistance to Pseudomonas|
           syringae protein 3)
          Length = 926

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
 Frame = +1

Query: 268 LGKLATLMGEEFAKLKNLRKEVKYISDELSSMKDALESL------ADVDVLDKQTASWRD 429
           +G++ +++  E   L  +  E+  +  EL  MK  LE               +   ++  
Sbjct: 10  IGRILSVLENETLLLSGVHGEIDKMKKELLIMKSFLEDTHKHGGNGSTTTTTQLFQTFVA 69

Query: 430 VVREMSYDIEDIIDDF 477
             R+++Y IEDI+D+F
Sbjct: 70  NTRDLAYQIEDILDEF 85

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>MED9_YEAST (P33308) RNA polymerase II mediator complex subunit 9 (Chromosome|
           segregation protein 2)
          Length = 149

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 15/73 (20%), Positives = 36/73 (49%), Gaps = 15/73 (20%)
 Frame = +1

Query: 301 FAKLKNLRKEVKYISDELSSMKDAL------------ESLADVDVLDKQTASWRDVVREM 444
           F  L  +RK+   +S++L ++  ++            E+    D+L K  + W+D++ + 
Sbjct: 70  FYSLHQIRKDPNNLSNQLETLTGSIRHRLKLCKSLISENEDTKDLLSKSPSEWQDIIHQR 129

Query: 445 SYDIE---DIIDD 474
             +++   D++DD
Sbjct: 130 EQELQIKRDVLDD 142

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>THAS_PIG (P47787) Thromboxane-A synthase (EC 5.3.99.5) (TXA synthase) (TXS)|
          Length = 534

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -1

Query: 286 GWPAYPGESSLPRLKRSPLFQSSLAGQVFIFAL 188
           G PA P +  LPR    PL    + GQ F+F +
Sbjct: 309 GCPADPSQPHLPRPLSKPLTVDEVVGQAFLFLI 341

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>ILVB_METJA (Q57725) Probable acetolactate synthase large subunit (EC 2.2.1.6)|
           (AHAS) (Acetohydroxy-acid synthase large subunit) (ALS)
          Length = 591

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 12/44 (27%), Positives = 27/44 (61%)
 Frame = +1

Query: 313 KNLRKEVKYISDELSSMKDALESLADVDVLDKQTASWRDVVREM 444
           KN+R ++  + D  + ++D L +L  +++ DK+T  W + + E+
Sbjct: 309 KNVRADIPIVGDAKNVLRDLLAALIALEIKDKET--WLERIYEL 350

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>ENH2_HUMAN (Q9N2J9) HERV-H_3q26 provirus ancestral Env polyprotein precursor|
           (Envelope polyprotein) (Env protein HERV-H/p60)
           (HERV-H/env60) [Contains: Surface protein (SU);
           Transmembrane protein (TM)]
          Length = 563

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 20/76 (26%), Positives = 40/76 (52%)
 Frame = +1

Query: 184 TRERR*ILVQPEMTGIMVSASTGVMNSLLGKLATLMGEEFAKLKNLRKEVKYISDELSSM 363
           TR++R I + P M G+ +SAST  + + +  ++T +        +    +  IS  LS +
Sbjct: 383 TRQKRVIPLIPLMVGLGLSASTVALGTGIAGISTSVTTFRILSNDFSASITDISQTLSGL 442

Query: 364 KDALESLADVDVLDKQ 411
           +  ++S A V + ++Q
Sbjct: 443 QAQVDSSAAVVLQNRQ 458

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>PUMA_PARUN (O61308) 227 kDa spindle- and centromere-associated protein (PUMA1)|
          Length = 1955

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
 Frame = +1

Query: 295 EEFAKLKNLRKEVKYISDELSSMKDAL-ESLADV-DVLDKQTASWRDVVREMSYDIEDI 465
           +  A+L+   KE+  + DE+S  KD+L + LADV   L+ +T    D+ R      ED+
Sbjct: 606 KNIAQLEANIKEINLMRDEISKEKDSLAQKLADVTHKLEIETVRREDIQRSCVGHSEDV 664

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>SYS_RICPR (Q9ZCG5) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)|
           (SerRS)
          Length = 425

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 13/50 (26%), Positives = 33/50 (66%)
 Frame = +1

Query: 253 VMNSLLGKLATLMGEEFAKLKNLRKEVKYISDELSSMKDALESLADVDVL 402
           V + +LG + +  GEEF   + L+++V +I+++L+ ++  L++  +++ L
Sbjct: 53  VKSKILGNMVSKSGEEF---EELQRDVNHINEKLAELEQNLDNNNELNEL 99

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>PFD6_DROME (Q9VW56) Probable prefoldin subunit 6|
          Length = 125

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = +1

Query: 313 KNLRKEVKYISDELSSMKDALESL 384
           +N+ K ++YIS EL S  DALE++
Sbjct: 77  QNVGKRIEYISKELKSSTDALENM 100

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>ENH1_PANTR (P61559) ERV-H1 provirus ancestral Env polyprotein precursor|
           (Envelope polyprotein) (Env protein) (ERV-H/env62)
           [Contains: Surface protein (SU); Transmembrane protein
           (TM)]
          Length = 457

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 20/70 (28%), Positives = 39/70 (55%)
 Frame = +1

Query: 184 TRERR*ILVQPEMTGIMVSASTGVMNSLLGKLATLMGEEFAKLKNLRKEVKYISDELSSM 363
           TR++R I + P M G+ +SAST  +++ +  ++T +    +   +    +  IS  LS +
Sbjct: 383 TRQKRVIPLIPLMFGLGLSASTIALSTGIAGISTSVMTFRSLSNDFSASITDISQTLSVL 442

Query: 364 KDALESLADV 393
           +  ++SLA V
Sbjct: 443 QAQVDSLAAV 452

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>CCD39_HUMAN (Q9UFE4) Coiled-coil domain-containing protein 39|
          Length = 755

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
 Frame = +1

Query: 238 SASTGVMNSLLGKLATLMGEEFAKLKNLRKEVKYISDELSSMKDALESLAD-----VDVL 402
           S S  VM+S    LA L  E+   +    +E K + D+LS +KD   SL D      + +
Sbjct: 79  SLSAQVMSSEF--LAELHWEDGFAIPVANEENKLLEDQLSKLKDERASLQDELREYEERI 136

Query: 403 DKQTASWRDVVREMS 447
           +  T+ +++V +E+S
Sbjct: 137 NSMTSHFKNVKQELS 151

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>COL39_CAEEL (Q09455) Cuticle collagen 39 precursor|
          Length = 323

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 19/63 (30%), Positives = 28/63 (44%)
 Frame = +3

Query: 138 AAPLFQQPAQVHRMYN*RAKINTCPARDDWNNGERFNRGNELSPG*AGHPDGGGVRQAKE 317
           A  +F +  + H   N   + + CPA      G   +RG +  PG AG+P   GV   K 
Sbjct: 67  ARSVFVRRHKKHSQCNCGPQASNCPAGPPGPPGAPGDRGLDGQPGGAGNPGQPGVAGPKS 126

Query: 318 LEE 326
            E+
Sbjct: 127 HEQ 129


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,330,796
Number of Sequences: 219361
Number of extensions: 1213159
Number of successful extensions: 5068
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 4736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5056
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3304846491
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result