ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl04a07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK068391.1| Oryza sativa (japonica cultivar-group) cDNA clon... 214 2e-52
2dbj|D78573.1|RICAKHD Rice mRNA for aspartate kinase-homoserine d... 214 2e-52
3dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 200 3e-48
4dbj|AP005839.3| Oryza sativa (japonica cultivar-group) genomic D... 200 3e-48
5gb|AY111338.1| Zea mays CL2352_-1 mRNA sequence 145 1e-31
6gb|L33913.1|MZEAKHDA Zea mays (clone pAKHSDH2) aspartate kinase-... 145 1e-31
7ref|XM_481776.1| Oryza sativa (japonica cultivar-group), mRNA 109 8e-21
8ref|XM_481775.1| Oryza sativa (japonica cultivar-group), mRNA 109 8e-21
9dbj|AK066783.1| Oryza sativa (japonica cultivar-group) cDNA clon... 103 5e-19
10gb|AY111528.1| Zea mays CL2353_1 mRNA sequence 96 1e-16
11gb|L33912.1|MZEAKHD Zea mays (clone pAKHSDH1) aspartate kinase-h... 96 1e-16
12dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 88 3e-14
13dbj|AP004553.2| Oryza sativa (japonica cultivar-group) genomic D... 88 3e-14
14dbj|AP007175.1| Aspergillus oryzae RIB40 genomic DNA, SC010 44 0.40
15gb|DQ213556.1| Taeniopygia guttata clone 0058P0055A05 U3 snoRNP ... 42 1.6
16gb|DQ213555.1| Taeniopygia guttata clone 0058P0055E07 U3 snoRNP ... 42 1.6
17gb|DQ213554.1| Taeniopygia guttata clone 0058P0055F07 U3 snoRNP ... 42 1.6
18gb|DQ213553.1| Taeniopygia guttata clone 0058P0059C06 U3 snoRNP ... 42 1.6
19gb|DQ213552.1| Taeniopygia guttata clone 0058P0055D07 U3 snoRNP ... 42 1.6
20gb|AC164587.5| Mus musculus chromosome 5, clone RP24-222H12, com... 40 6.3
21gb|AC122775.15| Mus musculus chromosome 5, clone RP24-191K3, com... 40 6.3
22gb|AC108880.2| Homo sapiens chromosome X clone RP11-403L9 map p1... 40 6.3
23gb|AC091808.4| Homo sapiens chromosome X clone RP11-157D23 map p... 40 6.3
24gb|CP000082.1| Psychrobacter arcticus 273-4, complete genome 40 6.3
25gb|AC017060.7| Homo sapiens BAC clone RP11-350D14 from 7, comple... 40 6.3
26gb|CP000088.1| Thermobifida fusca YX, complete genome 40 6.3
27gb|AF421223.1| Acanthopteroctetes unifasciata 18S ribosomal RNA ... 40 6.3
28gb|AC021001.5|AC021001 Homo sapiens chromosome 8, clone RP11-419... 40 6.3
29dbj|AP000427.3| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 6.3
30emb|AL732568.8| Mouse DNA sequence from clone RP23-469G19 on chr... 40 6.3
31dbj|BA000009.3| Beta vulgaris subsp. vulgaris mitochondrial geno... 40 6.3
32dbj|BA000024.1| Beta vulgaris subsp. vulgaris mitochondrial geno... 40 6.3 
>dbj|AK068391.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146N15, full
           insert sequence
          Length = 3120

 Score =  214 bits (108), Expect = 2e-52
 Identities = 168/188 (89%)
 Strand = Plus / Plus

                                                                       
Query: 280 tttgccaagacatggttctaagaatctgctcacaccagctgctgccgtttcagttgaaca 339
           ||||| |||||||||||| | |||| ||||| || | ||||| ||  ||||| |||||||
Sbjct: 253 tttgcaaagacatggttccaggaatttgctcgcagctgctgcggctatttcaattgaaca 312

                                                                       
Query: 340 agttgaagtcagtacttatcttccaaaaggtgatatgtggtctgtgcacaagttcggtgg 399
           || |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 313 agctgaagtcagtacttatcttccaaaaggtgacatgtggtctgtgcacaagtttggtgg 372

                                                                       
Query: 400 cacttgcatgggaacacctcagagaattcagaatgttgctgatgtagttcttggtgactc 459
           ||| || ||||||||||| |||||||||||||||||||||||| | ||||||||||||||
Sbjct: 373 cacctgtatgggaacaccccagagaattcagaatgttgctgatattgttcttggtgactc 432

                   
Query: 460 ttccgaga 467
           ||| ||||
Sbjct: 433 ttctgaga 440



 Score =  121 bits (61), Expect = 2e-24
 Identities = 118/137 (86%)
 Strand = Plus / Plus

                                                                       
Query: 122 gagatgcggagcctcgccgtcgcgagccccgtcccgacagccgccgcccatcgacggagg 181
           |||||||||||||||||||||||||||||| ||||| | ||||||||   ||| ||  ||
Sbjct: 83  gagatgcggagcctcgccgtcgcgagccccctcccgcccgccgccgcggttcgccgccgg 142

                                                                       
Query: 182 ctccggccgtccgcctccggcagggaagtaatttcacaatgtttgaagtgtgggataaat 241
           |  ||  | ||||||||||| |||||||| ||||||||||||| |||||||| |||||||
Sbjct: 143 ccacgcgcatccgcctccggaagggaagtgatttcacaatgttggaagtgtgagataaat 202

                            
Query: 242 caggaccgacctttggg 258
           ||||||| |||||||||
Sbjct: 203 caggaccaacctttggg 219
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>dbj|D78573.1|RICAKHD Rice mRNA for aspartate kinase-homoserine dehydrogenase, complete
           cds
          Length = 3061

 Score =  214 bits (108), Expect = 2e-52
 Identities = 168/188 (89%)
 Strand = Plus / Plus

                                                                       
Query: 280 tttgccaagacatggttctaagaatctgctcacaccagctgctgccgtttcagttgaaca 339
           ||||| |||||||||||| | |||| ||||| || | ||||| ||  ||||| |||||||
Sbjct: 220 tttgcaaagacatggttccaggaatttgctcgcagctgctgcggctatttcaattgaaca 279

                                                                       
Query: 340 agttgaagtcagtacttatcttccaaaaggtgatatgtggtctgtgcacaagttcggtgg 399
           || |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 280 agctgaagtcagtacttatcttccaaaaggtgacatgtggtctgtgcacaagtttggtgg 339

                                                                       
Query: 400 cacttgcatgggaacacctcagagaattcagaatgttgctgatgtagttcttggtgactc 459
           ||| || ||||||||||| |||||||||||||||||||||||| | ||||||||||||||
Sbjct: 340 cacctgtatgggaacaccccagagaattcagaatgttgctgatattgttcttggtgactc 399

                   
Query: 460 ttccgaga 467
           ||| ||||
Sbjct: 400 ttctgaga 407



 Score =  121 bits (61), Expect = 2e-24
 Identities = 118/137 (86%)
 Strand = Plus / Plus

                                                                       
Query: 122 gagatgcggagcctcgccgtcgcgagccccgtcccgacagccgccgcccatcgacggagg 181
           |||||||||||||||||||||||||||||| ||||| | ||||||||   ||| ||  ||
Sbjct: 50  gagatgcggagcctcgccgtcgcgagccccctcccgcccgccgccgcggttcgccgccgg 109

                                                                       
Query: 182 ctccggccgtccgcctccggcagggaagtaatttcacaatgtttgaagtgtgggataaat 241
           |  ||  | ||||||||||| |||||||| ||||||||||||| |||||||| |||||||
Sbjct: 110 ccacgcgcatccgcctccggaagggaagtgatttcacaatgttggaagtgtgagataaat 169

                            
Query: 242 caggaccgacctttggg 258
           ||||||| |||||||||
Sbjct: 170 caggaccaacctttggg 186
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score =  200 bits (101), Expect = 3e-48
 Identities = 131/141 (92%)
 Strand = Plus / Minus

                                                                           
Query: 327     tttcagttgaacaagttgaagtcagtacttatcttccaaaaggtgatatgtggtctgtgc 386
               ||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 6953046 tttcaattgaacaagctgaagtcagtacttatcttccaaaaggtgacatgtggtctgtgc 6952987

                                                                           
Query: 387     acaagttcggtggcacttgcatgggaacacctcagagaattcagaatgttgctgatgtag 446
               ||||||| |||||||| || ||||||||||| |||||||||||||||||||||||| | |
Sbjct: 6952986 acaagtttggtggcacctgtatgggaacaccccagagaattcagaatgttgctgatattg 6952927

                                    
Query: 447     ttcttggtgactcttccgaga 467
               |||||||||||||||| ||||
Sbjct: 6952926 ttcttggtgactcttctgaga 6952906



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                        
Query: 202     cagggaagtaatttcacaatgtttgaagtgtgggataaatcaggaccgacctttggg 258
               ||||||||| ||||||||||||| |||||||| |||||||||||||| |||||||||
Sbjct: 6954192 cagggaagtgatttcacaatgttggaagtgtgagataaatcaggaccaacctttggg 6954136



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                              
Query: 122     gagatgcggagcctcgccgtcgcgagccccgtcccgacagccgccgc 168
               |||||||||||||||||||||||||||||| ||||| | ||||||||
Sbjct: 6955208 gagatgcggagcctcgccgtcgcgagccccctcccgcccgccgccgc 6955162
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>dbj|AP005839.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0044K01
          Length = 160643

 Score =  200 bits (101), Expect = 3e-48
 Identities = 131/141 (92%)
 Strand = Plus / Minus

                                                                         
Query: 327   tttcagttgaacaagttgaagtcagtacttatcttccaaaaggtgatatgtggtctgtgc 386
             ||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 24217 tttcaattgaacaagctgaagtcagtacttatcttccaaaaggtgacatgtggtctgtgc 24158

                                                                         
Query: 387   acaagttcggtggcacttgcatgggaacacctcagagaattcagaatgttgctgatgtag 446
             ||||||| |||||||| || ||||||||||| |||||||||||||||||||||||| | |
Sbjct: 24157 acaagtttggtggcacctgtatgggaacaccccagagaattcagaatgttgctgatattg 24098

                                  
Query: 447   ttcttggtgactcttccgaga 467
             |||||||||||||||| ||||
Sbjct: 24097 ttcttggtgactcttctgaga 24077



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                      
Query: 202   cagggaagtaatttcacaatgtttgaagtgtgggataaatcaggaccgacctttggg 258
             ||||||||| ||||||||||||| |||||||| |||||||||||||| |||||||||
Sbjct: 25363 cagggaagtgatttcacaatgttggaagtgtgagataaatcaggaccaacctttggg 25307



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                            
Query: 122   gagatgcggagcctcgccgtcgcgagccccgtcccgacagccgccgc 168
             |||||||||||||||||||||||||||||| ||||| | ||||||||
Sbjct: 26379 gagatgcggagcctcgccgtcgcgagccccctcccgcccgccgccgc 26333
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>gb|AY111338.1| Zea mays CL2352_-1 mRNA sequence
          Length = 3045

 Score =  145 bits (73), Expect = 1e-31
 Identities = 124/141 (87%)
 Strand = Plus / Plus

                                                                       
Query: 327 tttcagttgaacaagttgaagtcagtacttatcttccaaaaggtgatatgtggtctgtgc 386
           ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 264 tttcagttgaacaagatgaagtcaatacttatcttccaaaaggtgatatgtggtctgtgc 323

                                                                       
Query: 387 acaagttcggtggcacttgcatgggaacacctcagagaattcagaatgttgctgatgtag 446
           ||||||||||||| || || |||||||| ||  | ||||| |||  ||||||  || |||
Sbjct: 324 acaagttcggtggaacctgtatgggaactcccaaaagaatccagtgtgttgcaaatatag 383

                                
Query: 447 ttcttggtgactcttccgaga 467
           |||||||||| ||||| ||||
Sbjct: 384 ttcttggtgattcttctgaga 404
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>gb|L33913.1|MZEAKHDA Zea mays (clone pAKHSDH2) aspartate kinase-homoserine dehydrogenase
           mRNA, complete cds
          Length = 3045

 Score =  145 bits (73), Expect = 1e-31
 Identities = 124/141 (87%)
 Strand = Plus / Plus

                                                                       
Query: 327 tttcagttgaacaagttgaagtcagtacttatcttccaaaaggtgatatgtggtctgtgc 386
           ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 264 tttcagttgaacaagatgaagtcaatacttatcttccaaaaggtgatatgtggtctgtgc 323

                                                                       
Query: 387 acaagttcggtggcacttgcatgggaacacctcagagaattcagaatgttgctgatgtag 446
           ||||||||||||| || || |||||||| ||  | ||||| |||  ||||||  || |||
Sbjct: 324 acaagttcggtggaacctgtatgggaactcccaaaagaatccagtgtgttgcaaatatag 383

                                
Query: 447 ttcttggtgactcttccgaga 467
           |||||||||| ||||| ||||
Sbjct: 384 ttcttggtgattcttctgaga 404
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>ref|XM_481776.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2727

 Score =  109 bits (55), Expect = 8e-21
 Identities = 121/143 (84%)
 Strand = Plus / Plus

                                                                       
Query: 299 aagaatctgctcacaccagctgctgccgtttcagttgaacaagttgaagtcagtacttat 358
           |||||| ||||||  ||||||||||| ||||||||||| |||| |||||  ||| || | 
Sbjct: 255 aagaatatgctcaagccagctgctgctgtttcagttgagcaagctgaagctagtgctcac 314

                                                                       
Query: 359 cttccaaaaggtgatatgtggtctgtgcacaagttcggtggcacttgcatgggaacacct 418
           |||||||||||||| |||||||||||||| || || ||||| || |||||||||||  | 
Sbjct: 315 cttccaaaaggtgacatgtggtctgtgcataaatttggtgggacctgcatgggaacctcc 374

                                  
Query: 419 cagagaattcagaatgttgctga 441
           ||||| ||||||||||| |||||
Sbjct: 375 cagaggattcagaatgtggctga 397



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 129 ggagcctcgccgtcgcgagccc 150
           ||||||||||||||||||||||
Sbjct: 55  ggagcctcgccgtcgcgagccc 76
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>ref|XM_481775.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2766

 Score =  109 bits (55), Expect = 8e-21
 Identities = 121/143 (84%)
 Strand = Plus / Plus

                                                                       
Query: 299 aagaatctgctcacaccagctgctgccgtttcagttgaacaagttgaagtcagtacttat 358
           |||||| ||||||  ||||||||||| ||||||||||| |||| |||||  ||| || | 
Sbjct: 205 aagaatatgctcaagccagctgctgctgtttcagttgagcaagctgaagctagtgctcac 264

                                                                       
Query: 359 cttccaaaaggtgatatgtggtctgtgcacaagttcggtggcacttgcatgggaacacct 418
           |||||||||||||| |||||||||||||| || || ||||| || |||||||||||  | 
Sbjct: 265 cttccaaaaggtgacatgtggtctgtgcataaatttggtgggacctgcatgggaacctcc 324

                                  
Query: 419 cagagaattcagaatgttgctga 441
           ||||| ||||||||||| |||||
Sbjct: 325 cagaggattcagaatgtggctga 347



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 129 ggagcctcgccgtcgcgagccc 150
           ||||||||||||||||||||||
Sbjct: 5   ggagcctcgccgtcgcgagccc 26
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>dbj|AK066783.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075O09, full
           insert sequence
          Length = 2726

 Score =  103 bits (52), Expect = 5e-19
 Identities = 109/128 (85%)
 Strand = Plus / Plus

                                                                       
Query: 314 ccagctgctgccgtttcagttgaacaagttgaagtcagtacttatcttccaaaaggtgat 373
           ||||||||||| ||||||||||| |||| |||||  ||| || | |||||||||||||| 
Sbjct: 269 ccagctgctgctgtttcagttgagcaagctgaagctagtgctcaccttccaaaaggtgac 328

                                                                       
Query: 374 atgtggtctgtgcacaagttcggtggcacttgcatgggaacacctcagagaattcagaat 433
           |||||||||||||| || || ||||| || |||||||||||  | ||||| |||||||||
Sbjct: 329 atgtggtctgtgcataaatttggtgggacctgcatgggaacctcccagaggattcagaat 388

                   
Query: 434 gttgctga 441
           || |||||
Sbjct: 389 gtggctga 396



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 129 ggagcctcgccgtcgcgagccc 150
           ||||||||||||||||||||||
Sbjct: 54  ggagcctcgccgtcgcgagccc 75
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>gb|AY111528.1| Zea mays CL2353_1 mRNA sequence
          Length = 3153

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 117/140 (83%)
 Strand = Plus / Plus

                                                                       
Query: 317 gctgctgccgtttcagttgaacaagttgaagtcagtacttatcttccaaaaggtgatatg 376
           |||| ||| ||||||||||| |||| |||||  | | || | || ||||||||||| |||
Sbjct: 261 gctggtgctgtttcagttgagcaagctgaagctattgctgacctcccaaaaggtgacatg 320

                                                                       
Query: 377 tggtctgtgcacaagttcggtggcacttgcatgggaacacctcagagaattcagaatgtt 436
           ||||| ||||||||||| |||||||| |||||||| ||  || |||||||||| ||||||
Sbjct: 321 tggtcggtgcacaagtttggtggcacatgcatggggacctctgagagaattcacaatgtt 380

                               
Query: 437 gctgatgtagttcttggtga 456
           |||||| |||| ||| ||||
Sbjct: 381 gctgatatagtccttcgtga 400
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>gb|L33912.1|MZEAKHD Zea mays (clone pAKHSDH1) aspartate kinase-homoserine dehydrogenase
           mRNA, complete cds
          Length = 3178

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 117/140 (83%)
 Strand = Plus / Plus

                                                                       
Query: 317 gctgctgccgtttcagttgaacaagttgaagtcagtacttatcttccaaaaggtgatatg 376
           |||| ||| ||||||||||| |||| |||||  | | || | || ||||||||||| |||
Sbjct: 261 gctggtgctgtttcagttgagcaagctgaagctattgctgacctcccaaaaggtgacatg 320

                                                                       
Query: 377 tggtctgtgcacaagttcggtggcacttgcatgggaacacctcagagaattcagaatgtt 436
           ||||| ||||||||||| |||||||| |||||||| ||  || |||||||||| ||||||
Sbjct: 321 tggtcggtgcacaagtttggtggcacatgcatggggacctctgagagaattcacaatgtt 380

                               
Query: 437 gctgatgtagttcttggtga 456
           |||||| |||| ||| ||||
Sbjct: 381 gctgatatagtccttcgtga 400
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 98/116 (84%)
 Strand = Plus / Minus

                                                                            
Query: 326      gtttcagttgaacaagttgaagtcagtacttatcttccaaaaggtgatatgtggtctgtg 385
                ||||||||||| |||| |||||  ||| || | |||||||||||||| ||||||||||||
Sbjct: 15441956 gtttcagttgagcaagctgaagctagtgctcaccttccaaaaggtgacatgtggtctgtg 15441897

                                                                        
Query: 386      cacaagttcggtggcacttgcatgggaacacctcagagaattcagaatgttgctga 441
                || || || ||||| || |||||||||||  | ||||| ||||||||||| |||||
Sbjct: 15441896 cataaatttggtgggacctgcatgggaacctcccagaggattcagaatgtggctga 15441841



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 129      ggagcctcgccgtcgcgagccc 150
                ||||||||||||||||||||||
Sbjct: 15443315 ggagcctcgccgtcgcgagccc 15443294
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>dbj|AP004553.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1790_D02
          Length = 162928

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 98/116 (84%)
 Strand = Plus / Minus

                                                                          
Query: 326    gtttcagttgaacaagttgaagtcagtacttatcttccaaaaggtgatatgtggtctgtg 385
              ||||||||||| |||| |||||  ||| || | |||||||||||||| ||||||||||||
Sbjct: 127532 gtttcagttgagcaagctgaagctagtgctcaccttccaaaaggtgacatgtggtctgtg 127473

                                                                      
Query: 386    cacaagttcggtggcacttgcatgggaacacctcagagaattcagaatgttgctga 441
              || || || ||||| || |||||||||||  | ||||| ||||||||||| |||||
Sbjct: 127472 cataaatttggtgggacctgcatgggaacctcccagaggattcagaatgtggctga 127417



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 129    ggagcctcgccgtcgcgagccc 150
              ||||||||||||||||||||||
Sbjct: 128891 ggagcctcgccgtcgcgagccc 128870
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>dbj|AP007175.1| Aspergillus oryzae RIB40 genomic DNA, SC010
          Length = 2039961

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 393    tcggtggcacttgcatgggaacacctcaga 422
              ||||||||||| ||||||||| ||||||||
Sbjct: 361609 tcggtggcactggcatgggaatacctcaga 361638
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>gb|DQ213556.1| Taeniopygia guttata clone 0058P0055A05 U3 snoRNP protein 4-like
           mRNA, complete sequence
          Length = 1070

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 148 ccccgtcccgacagccgccgc 168
           |||||||||||||||||||||
Sbjct: 662 ccccgtcccgacagccgccgc 682
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>gb|DQ213555.1| Taeniopygia guttata clone 0058P0055E07 U3 snoRNP protein 4-like
           mRNA, complete sequence
          Length = 1072

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 148 ccccgtcccgacagccgccgc 168
           |||||||||||||||||||||
Sbjct: 663 ccccgtcccgacagccgccgc 683
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>gb|DQ213554.1| Taeniopygia guttata clone 0058P0055F07 U3 snoRNP protein 4-like
           mRNA, complete sequence
          Length = 1072

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 148 ccccgtcccgacagccgccgc 168
           |||||||||||||||||||||
Sbjct: 663 ccccgtcccgacagccgccgc 683
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>gb|DQ213553.1| Taeniopygia guttata clone 0058P0059C06 U3 snoRNP protein 4-like
           mRNA, complete sequence
          Length = 1072

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 148 ccccgtcccgacagccgccgc 168
           |||||||||||||||||||||
Sbjct: 663 ccccgtcccgacagccgccgc 683
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>gb|DQ213552.1| Taeniopygia guttata clone 0058P0055D07 U3 snoRNP protein 4-like
           mRNA, complete sequence
          Length = 1072

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 148 ccccgtcccgacagccgccgc 168
           |||||||||||||||||||||
Sbjct: 663 ccccgtcccgacagccgccgc 683
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>gb|AC164587.5| Mus musculus chromosome 5, clone RP24-222H12, complete sequence
          Length = 176841

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 29     ttttggcgtctagcctttccccgt 52
              ||||||| ||||||||||||||||
Sbjct: 176720 ttttggcatctagcctttccccgt 176743
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>gb|AC122775.15| Mus musculus chromosome 5, clone RP24-191K3, complete sequence
          Length = 158766

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 29    ttttggcgtctagcctttccccgt 52
             ||||||| ||||||||||||||||
Sbjct: 34156 ttttggcatctagcctttccccgt 34179
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>gb|AC108880.2| Homo sapiens chromosome X clone RP11-403L9 map p11.4, complete sequence
          Length = 218413

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 207   aagtaatttcacaatgtttg 226
             ||||||||||||||||||||
Sbjct: 91169 aagtaatttcacaatgtttg 91150
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>gb|AC091808.4| Homo sapiens chromosome X clone RP11-157D23 map p11.4, complete sequence
          Length = 170219

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 207    aagtaatttcacaatgtttg 226
              ||||||||||||||||||||
Sbjct: 149534 aagtaatttcacaatgtttg 149515
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>gb|CP000082.1| Psychrobacter arcticus 273-4, complete genome
          Length = 2650701

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 20      aagcagggtttttggcgtct 39
               ||||||||||||||||||||
Sbjct: 1125399 aagcagggtttttggcgtct 1125418
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>gb|AC017060.7| Homo sapiens BAC clone RP11-350D14 from 7, complete sequence
          Length = 103354

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 271  aggaggaaatttgccaagac 290
            ||||||||||||||||||||
Sbjct: 6406 aggaggaaatttgccaagac 6387
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>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 194     gcctccggcagggaagtaat 213
               ||||||||||||||||||||
Sbjct: 1710536 gcctccggcagggaagtaat 1710517
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>gb|AF421223.1| Acanthopteroctetes unifasciata 18S ribosomal RNA gene, partial
           sequence
          Length = 646

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 171 atcgacggaggctccggccg 190
           ||||||||||||||||||||
Sbjct: 147 atcgacggaggctccggccg 166
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>gb|AC021001.5|AC021001 Homo sapiens chromosome 8, clone RP11-419L20, complete sequence
          Length = 175742

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 209   gtaatttcacaatgtttgaagtgt 232
             ||||||||||||||||| ||||||
Sbjct: 56356 gtaatttcacaatgtttcaagtgt 56333
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>dbj|AP000427.3| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1171G1
          Length = 187189

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 209   gtaatttcacaatgtttgaagtgt 232
             ||||||||||||||||| ||||||
Sbjct: 39345 gtaatttcacaatgtttcaagtgt 39368
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>emb|AL732568.8| Mouse DNA sequence from clone RP23-469G19 on chromosome 4, complete
             sequence
          Length = 169474

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 300   agaatctgctcacaccagct 319
             ||||||||||||||||||||
Sbjct: 81779 agaatctgctcacaccagct 81760
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>dbj|BA000009.3| Beta vulgaris subsp. vulgaris mitochondrial genomic DNA, complete
              sequence
          Length = 368801

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 345    aagtcagtacttatcttccaaaag 368
              |||||||| |||||||||||||||
Sbjct: 209001 aagtcagttcttatcttccaaaag 208978



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 345    aagtcagtacttatcttccaaaag 368
              |||||||| |||||||||||||||
Sbjct: 132203 aagtcagttcttatcttccaaaag 132226
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>dbj|BA000024.1| Beta vulgaris subsp. vulgaris mitochondrial genomic DNA, complete
              sequence
          Length = 501020

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 345    aagtcagtacttatcttccaaaag 368
              |||||||| |||||||||||||||
Sbjct: 500349 aagtcagttcttatcttccaaaag 500372



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 345    aagtcagtacttatcttccaaaag 368
              |||||||| |||||||||||||||
Sbjct: 326840 aagtcagttcttatcttccaaaag 326863



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 345    aagtcagtacttatcttccaaaag 368
              |||||||| |||||||||||||||
Sbjct: 134324 aagtcagttcttatcttccaaaag 134347


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,975,645
Number of Sequences: 3902068
Number of extensions: 2975645
Number of successful extensions: 54676
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 54557
Number of HSP's gapped (non-prelim): 117
length of query: 467
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 445
effective length of database: 17,147,199,772
effective search space: 7630503898540
effective search space used: 7630503898540
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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