>ACA1_ARATH (Q37145) Calcium-transporting ATPase 1, chloroplast precursor (EC|
           3.6.3.8) (Ca(2+)-ATPase isoform 1) (Plastid envelope
           ATPase 1)
          Length = 1020

 Score =  139 bits (351), Expect = 2e-33
 Identities = 68/91 (74%), Positives = 79/91 (86%)
 Frame = +1

Query: 160 MESYLEENFGGVKGKNSSEEALRRWRKLCSVVKNPKRRFRFTANLDKRGEAQAIKHANHE 339
           MESYL ENFG VK KNSS+EAL+RWRKLC +VKNPKRRFRFTANL KR EA+AI+ +N E
Sbjct: 1   MESYLNENFGDVKPKNSSDEALQRWRKLCWIVKNPKRRFRFTANLSKRSEAEAIRRSNQE 60

Query: 340 KLRVAVLMSKAALQFIHGLKLRNEYVVPEEV 432
           K RVAVL+S+AALQFI+ LKL +EY +PEEV
Sbjct: 61  KFRVAVLVSQAALQFINSLKLSSEYTLPEEV 91

>ACA7_ARATH (O64806) Putative calcium-transporting ATPase 7, plasma|
           membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 7)
          Length = 1015

 Score =  117 bits (293), Expect = 1e-26
 Identities = 62/91 (68%), Positives = 71/91 (78%)
 Frame = +1

Query: 160 MESYLEENFGGVKGKNSSEEALRRWRKLCSVVKNPKRRFRFTANLDKRGEAQAIKHANHE 339
           MESYL  NF  VK K+SSEE L +WR LCSVVKNPKRRFRFTANL KR EA A++  N E
Sbjct: 1   MESYLNSNFD-VKAKHSSEEVLEKWRNLCSVVKNPKRRFRFTANLSKRYEAAAMRRTNQE 59

Query: 340 KLRVAVLMSKAALQFIHGLKLRNEYVVPEEV 432
           KLR+AVL+SKAA QFI G+   ++Y VPEEV
Sbjct: 60  KLRIAVLVSKAAFQFISGVS-PSDYKVPEEV 89

>ACA2_ARATH (O81108) Calcium-transporting ATPase 2, plasma membrane-type (EC|
           3.6.3.8) (Ca(2+)-ATPase isoform 2)
          Length = 1014

 Score =  117 bits (293), Expect = 1e-26
 Identities = 61/91 (67%), Positives = 71/91 (78%)
 Frame = +1

Query: 160 MESYLEENFGGVKGKNSSEEALRRWRKLCSVVKNPKRRFRFTANLDKRGEAQAIKHANHE 339
           MESYL ENF  VK K+SSEE L +WR LC VVKNPKRRFRFTANL KR EA A++  N E
Sbjct: 1   MESYLNENFD-VKAKHSSEEVLEKWRNLCGVVKNPKRRFRFTANLSKRYEAAAMRRTNQE 59

Query: 340 KLRVAVLMSKAALQFIHGLKLRNEYVVPEEV 432
           KLR+AVL+SKAA QFI G+   ++Y VPE+V
Sbjct: 60  KLRIAVLVSKAAFQFISGVS-PSDYTVPEDV 89

>ACA4_ARATH (O22218) Calcium-transporting ATPase 4, plasma membrane-type (EC|
           3.6.3.8) (Ca(2+)-ATPase isoform 4)
          Length = 1030

 Score = 65.5 bits (158), Expect = 5e-11
 Identities = 38/80 (47%), Positives = 48/80 (60%)
 Frame = +1

Query: 193 VKGKNSSEEALRRWRKLCSVVKNPKRRFRFTANLDKRGEAQAIKHANHEKLRVAVLMSKA 372
           V+ KN S EA +RWR   S+VKN  RRFR   +LDK  + +  KH   EK+RVA  + KA
Sbjct: 10  VEAKNPSLEARQRWRSSVSIVKNRTRRFRNIRDLDKLADYENKKHQIQEKIRVAFFVQKA 69

Query: 373 ALQFIHGLKLRNEYVVPEEV 432
           AL FI     R EY + +EV
Sbjct: 70  ALHFIDA-AARPEYKLTDEV 88

>ACA11_ARATH (Q9M2L4) Putative calcium-transporting ATPase 11, plasma|
           membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 11)
          Length = 1025

 Score = 60.5 bits (145), Expect = 2e-09
 Identities = 36/80 (45%), Positives = 45/80 (56%)
 Frame = +1

Query: 193 VKGKNSSEEALRRWRKLCSVVKNPKRRFRFTANLDKRGEAQAIKHANHEKLRVAVLMSKA 372
           V  KN S EA +RWR    +VKN  RRFR  +NLDK  E +  +    EK+RV   + KA
Sbjct: 10  VASKNPSLEARQRWRSSVGLVKNRARRFRMISNLDKLAENEKKRCQIQEKIRVVFYVQKA 69

Query: 373 ALQFIHGLKLRNEYVVPEEV 432
           A QFI     R EY + +EV
Sbjct: 70  AFQFIDA-GARPEYKLTDEV 88

>ACA10_ARATH (Q9SZR1) Putative calcium-transporting ATPase 10, plasma|
           membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 10)
          Length = 1069

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
 Frame = +1

Query: 109 GEGARSPPAGEGGREVGMESYLEEN---FGGVKGKNSSEEALRRWRKLCSVVKNPKRRFR 279
           G+   SP   +   E G  S+ E     F     KN+  E LRRWR+  ++V N  RRFR
Sbjct: 3   GQFNNSPRGEDKDVEAGTSSFTEYEDSPFDIASTKNAPVERLRRWRQ-AALVLNASRRFR 61

Query: 280 FTANLDKRGEAQAI---KHANHEKLRVAVLMSKAA 375
           +T +L +  + + +     A+ + +R A L   AA
Sbjct: 62  YTLDLKREEDKKQMLRKMRAHAQAIRAAHLFKAAA 96

>ACA9_ARATH (Q9LU41) Putative calcium-transporting ATPase 9, plasma|
           membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 9)
          Length = 1073

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
 Frame = +1

Query: 202 KNSSEEALRRWRKLCSVVKNPKRRFRFTANLDKR---GEAQAIKHANHEKLRVAVLMSKA 372
           KN+S E+LRRWR+  ++V N  RRFR+T +L+K       + +  A+ + +R A+L   A
Sbjct: 38  KNASVESLRRWRQ-AALVLNASRRFRYTLDLNKEEHYDNRRRMIRAHAQVIRAALLFKLA 96

Query: 373 ALQFI 387
             Q I
Sbjct: 97  GEQQI 101

>ACA8_ARATH (Q9LF79) Calcium-transporting ATPase 8, plasma membrane-type (EC|
           3.6.3.8) (Ca(2+)-ATPase isoform 8)
          Length = 1074

 Score = 37.7 bits (86), Expect = 0.012
 Identities = 18/44 (40%), Positives = 29/44 (65%)
 Frame = +1

Query: 193 VKGKNSSEEALRRWRKLCSVVKNPKRRFRFTANLDKRGEAQAIK 324
           +  KN+S E L++WRK  ++V N  RRFR+T +L K  E + ++
Sbjct: 34  IPSKNASIERLQQWRK-AALVLNASRRFRYTLDLKKEQETREMR 76

>RIMM_VIBCH (Q9KUF9) 16S rRNA-processing protein rimM|
          Length = 182

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +1

Query: 157 GMESYLEENFGGVKGKNSSEEALRRWRKLCSVVKNPKRRFRFTA-NLDKRGE 309
           G E+  ++N   V GK  S   +R W K+ S   NP+  F ++   +D++GE
Sbjct: 3   GKETMSKQNEKLVVGKLGSSYGIRGWLKVFSYTDNPESIFDYSPWYIDQKGE 54

>TRUA_PICTO (Q6L0Y7) tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA-uridine|
           isomerase I) (tRNA pseudouridylate synthase I)
          Length = 251

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 20/82 (24%), Positives = 29/82 (35%)
 Frame = +1

Query: 178 ENFGGVKGKNSSEEALRRWRKLCSVVKNPKRRFRFTANLDKRGEAQAIKHANHEKLRVAV 357
           E F     KNS E  +       ++ KN +   R   N+   G    IK     +  + +
Sbjct: 21  EGFDRSNSKNSVESVIINVLSEYNITKNIESAARTDKNVSAAGNVFYIKTEERPEKILGI 80

Query: 358 LMSKAALQFIHGLKLRNEYVVP 423
           L       F H   L N Y+ P
Sbjct: 81  LNGNIKNMFFHSYYLSNSYINP 102

>SYL_PSEPK (Q88DN1) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)|
           (LeuRS)
          Length = 868

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +1

Query: 301 RGEAQAIKHANHEKLRVAVLMSKAALQFIHGLKLRNEYVVP 423
           RG+ +    A+ E++  A   ++  L+FI GL +R   VVP
Sbjct: 819 RGQVEMPAAASREEVEAAARSNENVLRFIDGLTIRKVIVVP 859

>CLIC6_RABIT (Q9N2G5) Chloride intracellular channel 6 (Parchorin)|
          Length = 637

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +1

Query: 112 EGARSPPAGEGGREVGMESYLEENFGGVKGKNSSEEA 222
           EGA   P+GEG          EE  GG  G+ + E+A
Sbjct: 40  EGAAKAPSGEGAGAAAKAGATEEASGGRDGEGAGEQA 76

>SMC2_SCHPO (P41003) Structural maintenance of chromosome 2 (Chromosome|
           segregation protein cut14) (Cell untimely torn protein
           14)
          Length = 1172

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = -2

Query: 243 ELAPAPQRLLGRVLALDAPEVLLQVALHP 157
           EL PA Q + G  L  D PE   +V  HP
Sbjct: 616 ELLPAMQYVFGSTLVCDTPESAKKVTFHP 644

>SAX1_CHICK (P19601) Homeobox protein SAX-1 (CHOX-3) (Fragment)|
          Length = 232

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
 Frame = -2

Query: 249 AAELAPAPQR---LLGRVLALDAPEVLLQVALHPHLPPSLARRRTPRSLAGLK*INIPAP 79
           AA  +P+P R   L G+     A    L  A  P  PP   RRRT RSL G +      P
Sbjct: 138 AARCSPSPPRPAALPGQTFPSYAATSALFPAASP-FPPGRPRRRTLRSLLGARVPRASTP 196

Query: 78  ARTSRP 61
             +  P
Sbjct: 197 RTSENP 202

>IDGF3_DROYA (Q8MX31) Chitinase-like protein Idgf3 precursor (Imaginal disk|
           growth factor protein 3)
          Length = 441

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +1

Query: 199 GKNSSEEALRRWRKLCSVVKNPKRRFRFTANLDKRGEAQAIK 324
           G  S +E L  W ++CS++ NP        N + RG +  +K
Sbjct: 327 GPQSKKEGLLNWAEICSLMPNP-------GNTNARGPSAPVK 361

>CTDP1_HUMAN (Q9Y5B0) RNA polymerase II subunit A C-terminal domain phosphatase|
           (EC 3.1.3.16) (TFIIF-associating CTD phosphatase)
          Length = 961

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 5/30 (16%)
 Frame = +2

Query: 11  HTLPILPANQPNQRV-----NPGRLVRAGA 85
           H +P+LP  QP   V     N G+L+R GA
Sbjct: 757 HPMPVLPKAQPGPEVRIYDSNTGKLIRTGA 786

>SOX14_DROME (P40656) Putative transcription factor SOX-14|
          Length = 472

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +3

Query: 6   PHTHSPSSPQTNPTSASIPAGSCAPG 83
           PHT  P SP  +P S+  PA +  PG
Sbjct: 50  PHTLPPFSPSPSPASSPSPAPAQTPG 75


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,140,809
Number of Sequences: 219361
Number of extensions: 753571
Number of successful extensions: 3822
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3817
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2453576370
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)