>ref|NM_186392.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2856

 Score =  121 bits (61), Expect = 2e-24
 Identities = 109/125 (87%)
 Strand = Plus / Plus

                                                                       
Query: 350 agctacgcactcgtcccggcggacgagctctcgcgagcgctcgccagacagaactccagt 409
           |||||||| ||||| ||||| |||||||||||||| | |||||| || || || || |||
Sbjct: 298 agctacgcgctcgtgccggccgacgagctctcgcgtgtgctcgcgaggcaaaattctagt 357

                                                                       
Query: 410 ttggcattgcataataaacatccgtttgctgaagacagtgctggtgcttatcctttggtg 469
           ||||||||||||||||||||| | |||||||| || ||||||||||| || |||||||||
Sbjct: 358 ttggcattgcataataaacattcatttgctgaggatagtgctggtgcgtaccctttggtg 417

                
Query: 470 cttag 474
           |||||
Sbjct: 418 cttag 422



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                       
Query: 128 tcctcctcctgccccgccgccgtctgcctcgtccctttcaggtggtgggcgggggtgcgc 187
           |||||||||| || | ||||||||||||||||||| ||||||||||||||| ||||| | 
Sbjct: 73  tcctcctcctcccactccgccgtctgcctcgtccccttcaggtggtgggcgagggtgagg 132

                    
Query: 188 gaggaggcg 196
           |||||||||
Sbjct: 133 gaggaggcg 141



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 53/58 (91%)
 Strand = Plus / Plus

                                                                     
Query: 266 ctccacagcttcctccacccagatctcgtgctgcgcctcgaccgcggggagtgccgcg 323
           |||||||||||||||||||| ||||||||||| |||||||| |||||||  |||||||
Sbjct: 214 ctccacagcttcctccacccggatctcgtgcttcgcctcgagcgcgggggttgccgcg 271

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 62/68 (91%)
 Strand = Plus / Plus

                                                                           
Query: 407     agtttggcattgcataataaacatccgtttgctgaagacagtgctggtgcttatcctttg 466
               |||||||||||||||||||||||| | |||||||| || ||||||||||| || ||||||
Sbjct: 3242526 agtttggcattgcataataaacattcatttgctgaggatagtgctggtgcgtaccctttg 3242585

                       
Query: 467     gtgcttag 474
               ||||||||
Sbjct: 3242586 gtgcttag 3242593



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 53/58 (91%)
 Strand = Plus / Plus

                                                                         
Query: 266     ctccacagcttcctccacccagatctcgtgctgcgcctcgaccgcggggagtgccgcg 323
               |||||||||||||||||||| ||||||||||| |||||||| |||||||  |||||||
Sbjct: 3239572 ctccacagcttcctccacccggatctcgtgcttcgcctcgagcgcgggggttgccgcg 3239629



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                          
Query: 128     tcctcctcctgccccgccgccgtctgcctcgtccctttcaggt 170
               |||||||||| || | ||||||||||||||||||| |||||||
Sbjct: 3239346 tcctcctcctcccactccgccgtctgcctcgtccccttcaggt 3239388



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                           
Query: 350     agctacgcactcgtcccggcggacgagctctcgcgagcgctcgc 393
               |||||||| ||||| ||||| |||||||||||||| | ||||||
Sbjct: 3239656 agctacgcgctcgtgccggccgacgagctctcgcgtgtgctcgc 3239699

>dbj|AP005454.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0455F03
          Length = 158201

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 62/68 (91%)
 Strand = Plus / Plus

                                                                          
Query: 407    agtttggcattgcataataaacatccgtttgctgaagacagtgctggtgcttatcctttg 466
              |||||||||||||||||||||||| | |||||||| || ||||||||||| || ||||||
Sbjct: 157516 agtttggcattgcataataaacattcatttgctgaggatagtgctggtgcgtaccctttg 157575

                      
Query: 467    gtgcttag 474
              ||||||||
Sbjct: 157576 gtgcttag 157583



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 53/58 (91%)
 Strand = Plus / Plus

                                                                        
Query: 266    ctccacagcttcctccacccagatctcgtgctgcgcctcgaccgcggggagtgccgcg 323
              |||||||||||||||||||| ||||||||||| |||||||| |||||||  |||||||
Sbjct: 154562 ctccacagcttcctccacccggatctcgtgcttcgcctcgagcgcgggggttgccgcg 154619



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                         
Query: 128    tcctcctcctgccccgccgccgtctgcctcgtccctttcaggt 170
              |||||||||| || | ||||||||||||||||||| |||||||
Sbjct: 154336 tcctcctcctcccactccgccgtctgcctcgtccccttcaggt 154378



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                          
Query: 350    agctacgcactcgtcccggcggacgagctctcgcgagcgctcgc 393
              |||||||| ||||| ||||| |||||||||||||| | ||||||
Sbjct: 154646 agctacgcgctcgtgccggccgacgagctctcgcgtgtgctcgc 154689

>dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1714_H10
          Length = 191580

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 62/68 (91%)
 Strand = Plus / Plus

                                                                         
Query: 407   agtttggcattgcataataaacatccgtttgctgaagacagtgctggtgcttatcctttg 466
             |||||||||||||||||||||||| | |||||||| || ||||||||||| || ||||||
Sbjct: 52219 agtttggcattgcataataaacattcatttgctgaggatagtgctggtgcgtaccctttg 52278

                     
Query: 467   gtgcttag 474
             ||||||||
Sbjct: 52279 gtgcttag 52286



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 53/58 (91%)
 Strand = Plus / Plus

                                                                       
Query: 266   ctccacagcttcctccacccagatctcgtgctgcgcctcgaccgcggggagtgccgcg 323
             |||||||||||||||||||| ||||||||||| |||||||| |||||||  |||||||
Sbjct: 49265 ctccacagcttcctccacccggatctcgtgcttcgcctcgagcgcgggggttgccgcg 49322



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                        
Query: 128   tcctcctcctgccccgccgccgtctgcctcgtccctttcaggt 170
             |||||||||| || | ||||||||||||||||||| |||||||
Sbjct: 49039 tcctcctcctcccactccgccgtctgcctcgtccccttcaggt 49081



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                         
Query: 350   agctacgcactcgtcccggcggacgagctctcgcgagcgctcgc 393
             |||||||| ||||| ||||| |||||||||||||| | ||||||
Sbjct: 49349 agctacgcgctcgtgccggccgacgagctctcgcgtgtgctcgc 49392

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 128      tcctcctcctgccccgccgccg 149
                ||||||||||||||||||||||
Sbjct: 21325164 tcctcctcctgccccgccgccg 21325143



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 128      tcctcctcctgccccgccgccg 149
                ||||||||||||||||||||||
Sbjct: 21290002 tcctcctcctgccccgccgccg 21289981

>dbj|AK122037.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033112P03, full
           insert sequence
          Length = 1245

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 128 tcctcctcctgccccgccgccg 149
           ||||||||||||||||||||||
Sbjct: 109 tcctcctcctgccccgccgccg 88

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 128      tcctcctcctgccccgccgccg 149
                ||||||||||||||||||||||
Sbjct: 21251383 tcctcctcctgccccgccgccg 21251362



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 128      tcctcctcctgccccgccgccg 149
                ||||||||||||||||||||||
Sbjct: 21216221 tcctcctcctgccccgccgccg 21216200

>emb|AL713932.4|CNS07YPD Oryza sativa chromosome 12, . BAC OSJNBb0094E08 of library OSJNBb
           from chromosome 12 of cultivar Nipponbare of ssp.
           japonica of Oryza sativa (rice), complete sequence
          Length = 137571

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 128 tcctcctcctgccccgccgccg 149
           ||||||||||||||||||||||
Sbjct: 188 tcctcctcctgccccgccgccg 209

>emb|AL713937.3|CNS07YPI Oryza sativa chromosome 12, . BAC OJ1103_B10 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 95132

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 128   tcctcctcctgccccgccgccg 149
             ||||||||||||||||||||||
Sbjct: 71276 tcctcctcctgccccgccgccg 71297



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 128   tcctcctcctgccccgccgccg 149
             ||||||||||||||||||||||
Sbjct: 36114 tcctcctcctgccccgccgccg 36135

>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and
             SNF2P genes, complete cds; nucellin pseudogene, complete
             sequence; putative transposase, phosphatidylinositol
             phosphatidylcholine transfer protein sec14 cytosolic-like
             protein, and phytochrome P450-like protein genes, complete
             cds; and unknown genes
          Length = 438828

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 128   tcctcctcctgccccgccgccgtct 152
             |||||||||| ||||||||||||||
Sbjct: 26253 tcctcctcctcccccgccgccgtct 26277

>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 294    tgctgcgcctcgaccgcggggagtgccgc 322
              ||||||||||||| ||||||||| |||||
Sbjct: 816560 tgctgcgcctcgagcgcggggagggccgc 816588

>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 294     tgctgcgcctcgaccgcggggagtgccgc 322
               ||||||||||||| ||||||||| |||||
Sbjct: 1703279 tgctgcgcctcgagcgcggggagggccgc 1703307

>gb|AE017286.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough plasmid pDV,
              complete sequence
          Length = 202301

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 136    ctgccccgccgccgtctgcct 156
              |||||||||||||||||||||
Sbjct: 161465 ctgccccgccgccgtctgcct 161445

>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 294     tgctgcgcctcgaccgcggggagtgccgc 322
               ||||||||||||| ||||||||| |||||
Sbjct: 1589992 tgctgcgcctcgagcgcggggagggccgc 1590020

>emb|BX294188.11| Zebrafish DNA sequence from clone DKEY-255G14, complete sequence
          Length = 261943

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 259    caggcttctccacagcttcctccac 283
              ||||||||||||||| |||||||||
Sbjct: 119847 caggcttctccacagattcctccac 119871

>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 220     cgcagccacgccggcggcctc 240
               |||||||||||||||||||||
Sbjct: 2453061 cgcagccacgccggcggcctc 2453081

>ref|NM_187950.1| Oryza sativa (japonica cultivar-group), Ozsa8370 predicted mRNA
          Length = 927

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 128 tcctcctcctgccccgccgccgtc 151
           |||||||||| |||||||||||||
Sbjct: 27  tcctcctcctcccccgccgccgtc 4

>gb|CP000110.1| Synechococcus sp. CC9605, complete genome
          Length = 2510659

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 291     tcgtgctgcgcctcgaccgc 310
               ||||||||||||||||||||
Sbjct: 2182181 tcgtgctgcgcctcgaccgc 2182200

>ref|XM_463596.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1614

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 128 tcctcctcctgccccgccgccgtc 151
           |||||||||| |||||||||||||
Sbjct: 844 tcctcctcctcccccgccgccgtc 867

>emb|BX640404.2| Chicken DNA sequence from clone WAG-36O23, complete sequence
          Length = 136520

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 276   tcctccacccagatctcgtgctgc 299
             ||||||||||||||||| ||||||
Sbjct: 48366 tcctccacccagatctcctgctgc 48343

>gb|AC158963.3| Mus musculus chromosome 1, clone RP23-321A12, complete sequence
          Length = 203604

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 435   ttgctgaagacagtgctggt 454
             ||||||||||||||||||||
Sbjct: 96815 ttgctgaagacagtgctggt 96796

>gb|AC151605.2| Emiliania huxleyi clone JGIACCU-13A3, complete sequence
          Length = 36153

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 168  ggtggtgggcgggggtgcgc 187
            ||||||||||||||||||||
Sbjct: 6070 ggtggtgggcgggggtgcgc 6089

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 128      tcctcctcctgccccgccgccgtc 151
                |||||||||| |||||||||||||
Sbjct: 39602578 tcctcctcctcccccgccgccgtc 39602601



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 128     tcctcctcctgccccgccgccgtc 151
               |||||||||| |||||||||||||
Sbjct: 8758512 tcctcctcctcccccgccgccgtc 8758489

>dbj|AP003416.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0456E05
          Length = 173699

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 128   tcctcctcctgccccgccgccgtc 151
             |||||||||| |||||||||||||
Sbjct: 83534 tcctcctcctcccccgccgccgtc 83557

>dbj|AP003796.2| Gallus gallus genomic DNA, chromosome 5, clone:26D12, complete sequence
          Length = 156014

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 276   tcctccacccagatctcgtgctgc 299
             ||||||||||||||||| ||||||
Sbjct: 42316 tcctccacccagatctcctgctgc 42339

>dbj|AP002817.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0699D11
          Length = 140825

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 128   tcctcctcctgccccgccgccgtc 151
             |||||||||| |||||||||||||
Sbjct: 75969 tcctcctcctcccccgccgccgtc 75946

>gb|AC131084.13| Mus musculus chromosome 1, clone RP23-450D2, complete sequence
          Length = 208140

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 435    ttgctgaagacagtgctggt 454
              ||||||||||||||||||||
Sbjct: 137617 ttgctgaagacagtgctggt 137598

>ref|NM_013135.1| Rattus norvegicus RAS p21 protein activator 1 (Rasa1), mRNA
          Length = 3117

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 188 gaggaggcggcagaggaggg 207
           ||||||||||||||||||||
Sbjct: 394 gaggaggcggcagaggaggg 375

>emb|AL805912.5| Mouse DNA sequence from clone RP23-425K3 on chromosome 4, complete
             sequence
          Length = 151967

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 270   acagcttcctccacccagat 289
             ||||||||||||||||||||
Sbjct: 56582 acagcttcctccacccagat 56563

>gb|L13151.1|RATGAPX Rat GTPase-activating protein (GAP) gene, complete cds
          Length = 3296

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 188 gaggaggcggcagaggaggg 207
           ||||||||||||||||||||
Sbjct: 491 gaggaggcggcagaggaggg 472


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,056,035
Number of Sequences: 3902068
Number of extensions: 3056035
Number of successful extensions: 64035
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 63601
Number of HSP's gapped (non-prelim): 434
length of query: 475
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 453
effective length of database: 17,147,199,772
effective search space: 7767681496716
effective search space used: 7767681496716
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)