ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl03h11 |
|---|---|
| Clone Library Name | barley_pub |
>MCRA_STRLA (P43485) Mitomycin radical oxidase (EC 1.5.3.-)| Length = 447 Score = 35.4 bits (80), Expect = 0.063 Identities = 21/48 (43%), Positives = 28/48 (58%) Frame = -1 Query: 350 AAEAVRLRTRPMTSTGCSVAAPPAPRGVEAGGKWRRCLEAGVLNGVAP 207 A +AV + TR M G SV A A +EAG +WR+ LE +G+AP Sbjct: 69 ADDAVLVNTRRME--GVSVDAARATAWIEAGARWRKVLEHTAPHGLAP 114
>Y2F9_ENCCU (Q8STG8) Hypothetical protein ECU02_1590/ECU04_0060/ECU08_2120| Length = 207 Score = 33.9 bits (76), Expect = 0.18 Identities = 16/43 (37%), Positives = 21/43 (48%) Frame = +1 Query: 13 PSTHPPITRICASRLRQPPPRSGDPARFATAPGNPRSDRPLPG 141 PS HP ++RLR PPR+ + F P + RP PG Sbjct: 12 PSDHPDFRSESSARLRCQPPRTNNCGTFKQPPSVAATSRPKPG 54
>HRG_BOVIN (P33433) Histidine-rich glycoprotein (Histidine-proline-rich| glycoprotein) (HPRG) (Fragments) Length = 396 Score = 33.1 bits (74), Expect = 0.31 Identities = 15/43 (34%), Positives = 18/43 (41%) Frame = +2 Query: 14 HPPTHQSRGFAPPDSASHHPDPATQPDSRPPPGTLDRTDPCQG 142 HP H G PPD+ + P P RPPP P +G Sbjct: 275 HPHGHHPHGHHPPDNDFYDHGPCDPPPHRPPPRHSKERGPGKG 317
>Y105_ENCCU (Q8STH9) Hypothetical protein ECU01_0050/ECU01_1560/ECU07_0010| Length = 238 Score = 31.6 bits (70), Expect = 0.91 Identities = 17/43 (39%), Positives = 22/43 (51%) Frame = +1 Query: 13 PSTHPPITRICASRLRQPPPRSGDPARFATAPGNPRSDRPLPG 141 PS HP R ++RLR PPR+ + F P + RP PG Sbjct: 44 PSDHPDF-RSKSARLRCQPPRTNNCGTFKQPPSVAATSRPKPG 85
>Y503_ENCCU (Q8ST70) Hypothetical protein ECU05_0030/ECU10_1870| Length = 489 Score = 31.6 bits (70), Expect = 0.91 Identities = 17/43 (39%), Positives = 22/43 (51%) Frame = +1 Query: 13 PSTHPPITRICASRLRQPPPRSGDPARFATAPGNPRSDRPLPG 141 PS HP R ++RLR PPR+ + F P + RP PG Sbjct: 44 PSDHPDF-RSKSARLRCQPPRTNNCGTFKQPPSVAATSRPKPG 85
>Y301_ENCCU (Q8SW85) Hypothetical protein ECU03_0010| Length = 276 Score = 31.6 bits (70), Expect = 0.91 Identities = 17/43 (39%), Positives = 22/43 (51%) Frame = +1 Query: 13 PSTHPPITRICASRLRQPPPRSGDPARFATAPGNPRSDRPLPG 141 PS HP R ++RLR PPR+ + F P + RP PG Sbjct: 44 PSDHPDF-RSKSARLRCQPPRTNNCGTFKQPPSVAATSRPKPG 85
>AUTS2_HUMAN (Q8WXX7) Autism susceptibility gene 2 protein| Length = 1259 Score = 30.8 bits (68), Expect = 1.6 Identities = 14/39 (35%), Positives = 17/39 (43%) Frame = +2 Query: 2 SRARHPPTHQSRGFAPPDSASHHPDPATQPDSRPPPGTL 118 S H P H P + SHHP+ P + PPP L Sbjct: 434 SLPNHSPLHSFTPTLQPPAHSHHPNMFAPPTALPPPPPL 472
>CWC22_NEUCR (Q7RX84) Pre-mRNA-splicing factor cwc-22| Length = 1010 Score = 30.8 bits (68), Expect = 1.6 Identities = 17/45 (37%), Positives = 21/45 (46%) Frame = +1 Query: 4 SRTPSTHPPITRICASRLRQPPPRSGDPARFATAPGNPRSDRPLP 138 S TP + P R +R P PR G PAR +PR+ P P Sbjct: 85 SPTPRSQSPSRR----SVRSPSPRQGSPARRVDRSSSPRARSPPP 125 Score = 28.9 bits (63), Expect = 5.9 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%) Frame = +1 Query: 1 ISRTPSTHPPITRICASRLRQPPPRSGDPA--RFATAPGNPRSDRPLPGMA 147 +S++ S PP R SR PPPR + R++ +P RS P A Sbjct: 780 VSKSVSRSPPRRRAVESRSPSPPPRGRGRSYDRYSRSPSRSRSRTRSPAAA 830
>LAMBV_CHICK (Q01636) Laminin beta-1 chain variant (Laminin beta-1-2 chain)| (Fragment) Length = 198 Score = 30.8 bits (68), Expect = 1.6 Identities = 17/39 (43%), Positives = 19/39 (48%) Frame = +2 Query: 17 PPTHQSRGFAPPDSASHHPDPATQPDSRPPPGTLDRTDP 133 PPTH A PD HPD P+SR PP R+ P Sbjct: 19 PPTH-----ARPDPTRRHPD----PESRAPPHARPRSPP 48
>B3A3_MOUSE (P16283) Anion exchange protein 3 (Neuronal band 3-like protein)| (Solute carrier family 4 member 3) Length = 1227 Score = 30.8 bits (68), Expect = 1.6 Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 9/53 (16%) Frame = +2 Query: 14 HPPTHQSRGFAP--PDSAS-------HHPDPATQPDSRPPPGTLDRTDPCQGW 145 HP + GF P P S+S HHP P+ PD P D+ +P W Sbjct: 426 HPNDDKDSGFFPRNPSSSSVNSVLGNHHPTPSHGPDGAVPTMADDQGEPAPLW 478
>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)| Length = 2716 Score = 30.8 bits (68), Expect = 1.6 Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 1/31 (3%) Frame = +2 Query: 17 PPTHQSRGFAPPDSA-SHHPDPATQPDSRPP 106 PP H S G PP S+ H P P+ QP P Sbjct: 442 PPPHVSAGGPPPSSSPGHAPSPSPQPSQASP 472 Score = 29.6 bits (65), Expect = 3.5 Identities = 14/37 (37%), Positives = 22/37 (59%) Frame = +2 Query: 2 SRARHPPTHQSRGFAPPDSASHHPDPATQPDSRPPPG 112 +R +PP + G APP A+ + ++P S+PPPG Sbjct: 1398 NRNMYPP-YGPEGEAPPTGANQYGPYGSRPYSQPPPG 1433
>SOX13_HUMAN (Q9UN79) SOX-13 protein (Type 1 diabetes autoantigen ICA12) (Islet| cell antigen 12) Length = 889 Score = 30.4 bits (67), Expect = 2.0 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = +1 Query: 247 LHFPPASTPRGAGGAATEHPVEVIGRVRNLTA 342 LH PPA + G AT HP++ + NLTA Sbjct: 248 LHSPPAPVVKRPGAMATHHPLQEPSQPLNLTA 279
>SHAN1_HUMAN (Q9Y566) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)| (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP) Length = 2161 Score = 30.0 bits (66), Expect = 2.7 Identities = 16/52 (30%), Positives = 17/52 (32%), Gaps = 8/52 (15%) Frame = +2 Query: 14 HPPTHQSRGFAPPDSASHHPDP--------ATQPDSRPPPGTLDRTDPCQGW 145 HPP H PP HH P PD PP L +GW Sbjct: 999 HPPHHHHHHAPPPQPHHHHAHPPHPPEMETGGSPDDPPPRLALGPQPSLRGW 1050
>SF01_MOUSE (Q64213) Splicing factor 1 (Zinc finger protein 162) (Transcription| factor ZFM1) (mZFM) (Zinc finger gene in MEN1 locus) (Mammalian branch point-binding protein mBBP) (BBP) (CW17) Length = 653 Score = 30.0 bits (66), Expect = 2.7 Identities = 11/28 (39%), Positives = 13/28 (46%) Frame = +2 Query: 26 HQSRGFAPPDSASHHPDPATQPDSRPPP 109 HQ +G PP P P P +PPP Sbjct: 464 HQGKGMMPPPPMGMMPPPPPPPSGQPPP 491
>SF01_HUMAN (Q15637) Splicing factor 1 (Zinc finger protein 162) (Transcription| factor ZFM1) (Zinc finger gene in MEN1 locus) (Mammalian branch point-binding protein mBBP) (BBP) Length = 639 Score = 30.0 bits (66), Expect = 2.7 Identities = 11/28 (39%), Positives = 13/28 (46%) Frame = +2 Query: 26 HQSRGFAPPDSASHHPDPATQPDSRPPP 109 HQ +G PP P P P +PPP Sbjct: 464 HQGKGMMPPPPMGMMPPPPPPPSGQPPP 491
>TEGU_HHV11 (P10220) Large tegument protein (Virion protein UL36)| Length = 3164 Score = 30.0 bits (66), Expect = 2.7 Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 5/45 (11%) Frame = +1 Query: 13 PSTHPPITRICASRLRQPPPRSGDPARFAT-----APGNPRSDRP 132 PS PP + A PPP SG P + T APG P S RP Sbjct: 2845 PSPPPPAVQPVA-----PPPTSGPPPTYLTLEGGVAPGGPVSRRP 2884
>SHAN1_RAT (Q9WV48) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)| (GKAP/SAPAP-interacting protein) (SPANK-1) (Synamon) (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP) Length = 2167 Score = 30.0 bits (66), Expect = 2.7 Identities = 16/52 (30%), Positives = 17/52 (32%), Gaps = 8/52 (15%) Frame = +2 Query: 14 HPPTHQSRGFAPPDSASHHPDP--------ATQPDSRPPPGTLDRTDPCQGW 145 HPP H PP HH P PD PP L +GW Sbjct: 1007 HPPHHHHHHAPPPQPHHHHAHPPHPPEMETGGSPDDPPPRLALGPQPSLRGW 1058
>SEPB_PSEPU (Q849R0) Probable efflux pump membrane transporter sepB| Length = 1046 Score = 29.6 bits (65), Expect = 3.5 Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 2/53 (3%) Frame = -1 Query: 350 AAEAVRLRTRP--MTSTGCSVAAPPAPRGVEAGGKWRRCLEAGVLNGVAPPAV 198 A EA RLR RP MTS + P R AG + + GV+ G+ V Sbjct: 962 AIEAARLRLRPIIMTSLAFTFGVLPMARATGAGAGSQHSIATGVVGGMITATV 1014
>B3A3_HUMAN (P48751) Anion exchange protein 3 (Neuronal band 3-like protein)| (Solute carrier family 4 member 3) (Cardiac/brain band 3-like protein) (CAE3/BAE3) Length = 1232 Score = 29.6 bits (65), Expect = 3.5 Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 9/53 (16%) Frame = +2 Query: 14 HPPTHQSRGFAP--PDSAS-------HHPDPATQPDSRPPPGTLDRTDPCQGW 145 HP + GF P P S+S HHP P+ PD P D +P W Sbjct: 427 HPNDDKDSGFFPRNPSSSSMNSVLGNHHPTPSHGPDGAVPTMADDLGEPAPLW 479
>TMPS9_HUMAN (Q7Z410) Transmembrane protease, serine 9 (EC 3.4.21.-)| (Polyserase-1) (Polyserase-I) (Polyserine protease 1) [Contains: Serase-1; Serase-2; Serase-3] Length = 1059 Score = 29.6 bits (65), Expect = 3.5 Identities = 30/100 (30%), Positives = 37/100 (37%), Gaps = 6/100 (6%) Frame = +1 Query: 13 PSTHPPITRICASRLRQPPPRSGDPARFATAPGNPRSDRPLPGMAXXXXXXXXXXXXXXX 192 P + P TR+ A+ P +G T PG S RP PG A Sbjct: 741 PMSPPSTTRMLATT--SPRTTAG-----LTVPGATPS-RPTPGAASRVTGQPANSTLSAV 792 Query: 193 QATAGGATPF-RTPASKHRLHFP-----PASTPRGAGGAA 294 TA G TPF P + P PA+ R GG+A Sbjct: 793 STTARGQTPFPDAPEATTHTQLPDCGLAPAALTRIVGGSA 832
>PO3F2_RAT (P56222) POU domain, class 3, transcription factor 2 (Nervous| system-specific octamer-binding transcription factor N-Oct-3) (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Protein Brn-2) Length = 445 Score = 29.6 bits (65), Expect = 3.5 Identities = 10/20 (50%), Positives = 12/20 (60%) Frame = +2 Query: 50 PDSASHHPDPATQPDSRPPP 109 P A HHP P + P +PPP Sbjct: 224 PHHADHHPHPHSHPHQQPPP 243
>PO3F2_MOUSE (P31360) POU domain, class 3, transcription factor 2 (Nervous| system-specific octamer-binding transcription factor N-Oct-3) (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Protein Brn-2) Length = 445 Score = 29.6 bits (65), Expect = 3.5 Identities = 10/20 (50%), Positives = 12/20 (60%) Frame = +2 Query: 50 PDSASHHPDPATQPDSRPPP 109 P A HHP P + P +PPP Sbjct: 224 PHHADHHPHPHSHPHQQPPP 243
>PRB3_HUMAN (Q04118) Basic salivary proline-rich protein 3 precursor (Parotid| salivary glycoprotein G1) (Proline-rich protein G1) Length = 309 Score = 29.6 bits (65), Expect = 3.5 Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 3/40 (7%) Frame = +2 Query: 2 SRARHPPTHQSRGFAPPDSASHHPD---PATQPDSRPPPG 112 ++ R PP H + PP + P P +P PPPG Sbjct: 234 NKPRGPPPHPGKPQGPPPQEGNKPQRPPPPRRPQGPPPPG 273
>B3A3_RAT (P23348) Anion exchange protein 3 (Neuronal band 3-like protein)| (Solute carrier family 4 member 3) Length = 1227 Score = 29.6 bits (65), Expect = 3.5 Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 9/53 (16%) Frame = +2 Query: 14 HPPTHQSRGFAP--PDSAS-------HHPDPATQPDSRPPPGTLDRTDPCQGW 145 HP + GF P P S+S HHP P+ PD P D +P W Sbjct: 426 HPNDDKDSGFFPRNPSSSSVNSVLGNHHPTPSHGPDGAVPTMADDLGEPAPLW 478
>PO3F2_HUMAN (P20265) POU domain, class 3, transcription factor 2 (Nervous| system-specific octamer-binding transcription factor N-Oct-3) (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Protein Brn-2) Length = 443 Score = 29.6 bits (65), Expect = 3.5 Identities = 10/20 (50%), Positives = 12/20 (60%) Frame = +2 Query: 50 PDSASHHPDPATQPDSRPPP 109 P A HHP P + P +PPP Sbjct: 222 PHHADHHPHPHSHPHQQPPP 241
>LTBP4_MOUSE (Q8K4G1) Latent transforming growth factor beta-binding protein 4| precursor (LTBP-4) Length = 1666 Score = 29.3 bits (64), Expect = 4.5 Identities = 14/31 (45%), Positives = 15/31 (48%) Frame = +2 Query: 17 PPTHQSRGFAPPDSASHHPDPATQPDSRPPP 109 PPT GF P PDP QP+ RP P Sbjct: 499 PPT----GFLPTRRPEPRPDPGPQPEPRPRP 525
>BAI1_HUMAN (O14514) Brain-specific angiogenesis inhibitor 1 precursor| Length = 1584 Score = 29.3 bits (64), Expect = 4.5 Identities = 16/51 (31%), Positives = 20/51 (39%), Gaps = 6/51 (11%) Frame = +2 Query: 8 ARHPPTHQSRGFAPPDSASHHPDPATQP------DSRPPPGTLDRTDPCQG 142 AR PP+ Q PP++ P P P PPP L+ P G Sbjct: 1390 ARSPPSRQPPSGGPPEAPPAQPPPPPPPPPPPPQQPLPPPPNLEPAPPSLG 1440
>PKWA_THECU (P49695) Probable serine/threonine-protein kinase pkwA (EC| 2.7.11.1) Length = 742 Score = 29.3 bits (64), Expect = 4.5 Identities = 13/24 (54%), Positives = 14/24 (58%) Frame = +1 Query: 67 PPRSGDPARFATAPGNPRSDRPLP 138 PPR +PAR A P NPR P P Sbjct: 361 PPRPREPARGAIKPKNPRPAAPQP 384
>WIRE_MOUSE (Q6PEV3) WIP-related protein (WASP-interacting protein-related| protein) Length = 440 Score = 28.9 bits (63), Expect = 5.9 Identities = 11/31 (35%), Positives = 14/31 (45%) Frame = +2 Query: 17 PPTHQSRGFAPPDSASHHPDPATQPDSRPPP 109 PP ++ G PP P P+ P PPP Sbjct: 343 PPPYRMHGSEPPSRGKPPPPPSRTPAGPPPP 373
>WIRE_HUMAN (Q8TF74) WIP-related protein (WASP-interacting protein-related| protein) (WIP-and CR16-homologous protein) Length = 440 Score = 28.9 bits (63), Expect = 5.9 Identities = 11/31 (35%), Positives = 14/31 (45%) Frame = +2 Query: 17 PPTHQSRGFAPPDSASHHPDPATQPDSRPPP 109 PP ++ G PP P P+ P PPP Sbjct: 343 PPPYRMHGSEPPSRGKPPPPPSRTPAGPPPP 373
>TEGU_EBV (P03186) Large tegument protein| Length = 3149 Score = 28.9 bits (63), Expect = 5.9 Identities = 28/107 (26%), Positives = 34/107 (31%), Gaps = 14/107 (13%) Frame = +1 Query: 28 PITRICASRLRQPP--PRSGDPARFATAPGNPRSDRPLPGMAXXXXXXXXXXXXXXXQAT 201 P R ++ PP P S PA A A P S P A Sbjct: 319 PAARYSPAKTNSPPSSPASAAPASAAPASAAPASAAP-------------ASAAPASAAP 365 Query: 202 AGGATPFRTPASKHRLHFP------------PASTPRGAGGAATEHP 306 A A PAS L P P++ PR + GAA + P Sbjct: 366 ASAAPASAAPASSPPLFIPIPGLGHTPGVPAPSTPPRASSGAAPQTP 412
>LYS4_EMENI (Q92412) Homoaconitase, mitochondrial precursor (EC 4.2.1.36)| (Homoaconitate hydratase) Length = 775 Score = 28.9 bits (63), Expect = 5.9 Identities = 32/110 (29%), Positives = 41/110 (37%), Gaps = 11/110 (10%) Frame = -1 Query: 299 SVAAPPAPRGVEAGGKWRRCLEAGV--LNGVAPPAVACXXXXXXXXXXXXXXGAIPGRGR 126 + A+ P E G W+ LEAG L P + +GR Sbjct: 431 AAASIPEQLAAEGNGDWQTLLEAGATQLPAGCGPCIGMGQGLLEPGEVGISASNRNFKGR 490 Query: 125 -------SDLGFPGAVANRAGSPDLGG-GW-RSREAQIRVIGGWVDGVRE 3 + LG P VA A S L G GW ++ E VI G DG+RE Sbjct: 491 MGSTEAKAYLGSPEVVAASALSGKLSGPGWYQTPEGWTEVIRGEGDGIRE 540
>YHC4_YEAST (P38741) Hypothetical 80.1 kDa protein in SNF6-SPO11 intergenic| region Length = 713 Score = 28.9 bits (63), Expect = 5.9 Identities = 15/34 (44%), Positives = 17/34 (50%) Frame = +2 Query: 20 PTHQSRGFAPPDSASHHPDPATQPDSRPPPGTLD 121 P H S+G A +HHP P S PPP LD Sbjct: 637 PLHPSQGSA----GNHHPYMMVYPMSPPPPSGLD 666
>PP1RA_PIG (Q767K9) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (MHC class I region proline-rich protein CAT53) (Protein FB19) Length = 925 Score = 28.9 bits (63), Expect = 5.9 Identities = 13/26 (50%), Positives = 15/26 (57%) Frame = +1 Query: 64 PPPRSGDPARFATAPGNPRSDRPLPG 141 PPPR GDP F PG+P P+ G Sbjct: 674 PPPRGGDP--FWDGPGDPMRGGPMRG 697
>ZDHC8_MOUSE (Q5Y5T5) Probable palmitoyltransferase ZDHHC8 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 8) (DHHC-8) Length = 762 Score = 28.9 bits (63), Expect = 5.9 Identities = 15/30 (50%), Positives = 16/30 (53%) Frame = +2 Query: 20 PTHQSRGFAPPDSASHHPDPATQPDSRPPP 109 PTH S G A S HP P+ P RPPP Sbjct: 492 PTHPSVGIASYHSPYLHPGPSDPP--RPPP 519
>PP1RA_PANTR (Q7YR38) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (MHC class I region proline-rich protein CAT53) (Protein FB19) Length = 940 Score = 28.9 bits (63), Expect = 5.9 Identities = 13/26 (50%), Positives = 15/26 (57%) Frame = +1 Query: 64 PPPRSGDPARFATAPGNPRSDRPLPG 141 PPPR GDP F PG+P P+ G Sbjct: 671 PPPRGGDP--FWDGPGDPMRGGPMRG 694
>PP1RA_MACMU (Q5TM61) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (MHC class I region proline-rich protein CAT53) Length = 940 Score = 28.9 bits (63), Expect = 5.9 Identities = 13/26 (50%), Positives = 15/26 (57%) Frame = +1 Query: 64 PPPRSGDPARFATAPGNPRSDRPLPG 141 PPPR GDP F PG+P P+ G Sbjct: 671 PPPRGGDP--FWDGPGDPMRGGPMRG 694
>PP1RA_HUMAN (Q96QC0) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (Phosphatase 1 nuclear targeting subunit) (MHC class I region proline-rich protein CAT53) (FB19 protein) (PP1-binding protein of 114 kDa) (p99) Length = 940 Score = 28.9 bits (63), Expect = 5.9 Identities = 13/26 (50%), Positives = 15/26 (57%) Frame = +1 Query: 64 PPPRSGDPARFATAPGNPRSDRPLPG 141 PPPR GDP F PG+P P+ G Sbjct: 671 PPPRGGDP--FWDGPGDPMRGGPMRG 694
>PRP3_RAT (P04474) Acidic proline-rich protein PRP33 precursor (Proline-rich| proteoglycan 1) Length = 206 Score = 28.9 bits (63), Expect = 5.9 Identities = 14/47 (29%), Positives = 17/47 (36%) Frame = +2 Query: 2 SRARHPPTHQSRGFAPPDSASHHPDPATQPDSRPPPGTLDRTDPCQG 142 +R PP H PP H P P+ P + PG P G Sbjct: 75 NRPERPPPHGGNHQRPPPGHHHGPPPSGGPQTSSQPGNPQGPPPQGG 121
>AB1IP_BRARE (Q6PFT9) Amyloid beta A4 precursor protein-binding family B member| 1-interacting protein (APBB1-interacting protein 1) Length = 646 Score = 28.9 bits (63), Expect = 5.9 Identities = 14/39 (35%), Positives = 17/39 (43%) Frame = +2 Query: 17 PPTHQSRGFAPPDSASHHPDPATQPDSRPPPGTLDRTDP 133 PP S G APP P PA P P G++ + P Sbjct: 575 PPAFTSAGGAPPPPPPPPPPPAPAPAVNNPAGSVRKVAP 613
>BRM_DROME (P25439) Homeotic gene regulator (EC 3.6.1.-) (ATP-dependent| helicase brm) (Protein brahma) Length = 1638 Score = 28.5 bits (62), Expect = 7.7 Identities = 11/28 (39%), Positives = 17/28 (60%) Frame = +1 Query: 58 RQPPPRSGDPARFATAPGNPRSDRPLPG 141 +QPPP +G P + +T P + P+PG Sbjct: 246 QQPPPSAGTPPQCSTPPASNPYGPPVPG 273
>PRB4M_HUMAN (P10161) Basic salivary proline-rich protein 4 allele M (Salivary| proline-rich protein Po) (Parotid o protein) [Contains: Peptide P-D] (Fragment) Length = 238 Score = 28.5 bits (62), Expect = 7.7 Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 3/39 (7%) Frame = +2 Query: 2 SRARHPPTHQSRGFAPPDSA---SHHPDPATQPDSRPPP 109 ++++ PP H + PP SH P P RPPP Sbjct: 99 NQSQGPPPHPGKPERPPPQGGNQSHRPPPPPGKPERPPP 137
>SFR15_HUMAN (O95104) Splicing factor, arginine/serine-rich 15 (CTD-binding| SR-like protein RA4) Length = 1147 Score = 28.5 bits (62), Expect = 7.7 Identities = 15/32 (46%), Positives = 15/32 (46%) Frame = +2 Query: 20 PTHQSRGFAPPDSASHHPDPATQPDSRPPPGT 115 P H GF PP P P T P S PPP T Sbjct: 731 PMHLPPGFLPPGP----PPPITPPVSIPPPHT 758
>TRI2_STRCO (Q9RKB9) Putative tricorn protease homolog 2 (EC 3.4.21.-)| Length = 1171 Score = 28.5 bits (62), Expect = 7.7 Identities = 32/102 (31%), Positives = 36/102 (35%), Gaps = 6/102 (5%) Frame = +1 Query: 67 PPRSGDP------ARFATAPGNPRSDRPLPGMAXXXXXXXXXXXXXXXQATAGGATPFRT 228 PP +GD AR +AP P D +A A AGG T Sbjct: 435 PPDAGDEDAAGTAARADSAPDAPAEDTDARDIAAGTGTGDIADA----DAAAGGTV---T 487 Query: 229 PASKHRLHFPPASTPRGAGGAATEHPVEVIGRVRNLTASAAG 354 P S TP AGG TE V G VR+L S G Sbjct: 488 PGSP--------GTPATAGGQVTELIRSVNGPVRDLAFSPDG 521
>SCNNB_CANFA (Q95165) Amiloride-sensitive sodium channel beta-subunit| (Epithelial Na+ channel beta subunit) (Beta ENaC) (Nonvoltage-gated sodium channel 1 beta subunit) (SCNEB) (Beta NaCH) (Fragment) Length = 88 Score = 28.5 bits (62), Expect = 7.7 Identities = 19/42 (45%), Positives = 21/42 (50%), Gaps = 9/42 (21%) Frame = +2 Query: 17 PPT-------HQSRGFAPPDSASHHPDPATQPDSR--PPPGT 115 PPT H + GF P D A PDP T PD + P PGT Sbjct: 46 PPTVAELVEAHTNFGFQP-DVARPGPDPGTYPDEQTLPIPGT 86
>SPEG_MOUSE (Q62407) Striated muscle-specific serine/threonine protein kinase| (EC 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1) Length = 3262 Score = 28.5 bits (62), Expect = 7.7 Identities = 17/41 (41%), Positives = 21/41 (51%) Frame = +1 Query: 13 PSTHPPITRICASRLRQPPPRSGDPARFATAPGNPRSDRPL 135 PST P +R + QPPP SG + PG PRS P+ Sbjct: 544 PST-PKTSRAVSPAATQPPPPSG-AGKSGDEPGRPRSRGPV 582
>PRB4L_HUMAN (P10162) Basic salivary proline-rich protein 4 allele L (Salivary| proline-rich protein Po) (Parotid o protein) [Contains: Peptide P-D] (Fragment) Length = 276 Score = 28.5 bits (62), Expect = 7.7 Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 3/39 (7%) Frame = +2 Query: 2 SRARHPPTHQSRGFAPPDSA---SHHPDPATQPDSRPPP 109 ++++ PP H + PP SH P P RPPP Sbjct: 137 NQSQGPPPHPGKPERPPPQGGNQSHRPPPPPGKPERPPP 175
>PAIP1_HUMAN (Q9H074) Polyadenylate-binding protein-interacting protein 1| (Poly(A)-binding protein-interacting protein 1) (PABP-interacting protein 1) (PAIP-1) Length = 479 Score = 28.5 bits (62), Expect = 7.7 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 1/37 (2%) Frame = +2 Query: 5 RARH-PPTHQSRGFAPPDSASHHPDPATQPDSRPPPG 112 RARH PP ++ GF P P QP + PPPG Sbjct: 40 RARHQPPQPKAPGFL-------QPPPLRQPRTTPPPG 69
>TBCD3_HUMAN (Q8IZP1) TBC1 domain family member 3 (Rab GTPase-activating protein| PRC17) (Prostate cancer gene 17 protein) (TRE17 alpha protein) Length = 549 Score = 28.5 bits (62), Expect = 7.7 Identities = 18/36 (50%), Positives = 19/36 (52%), Gaps = 6/36 (16%) Frame = +1 Query: 58 RQPPPRSGDPARF------ATAPGNPRSDRPLPGMA 147 RQ PP G PARF A+ P PRS P PG A Sbjct: 387 RQAPP--GPPARFPRPIWSASPPRAPRSSTPCPGGA 420
>RGDSR_HUMAN (Q8IZJ4) Ral-GDS-related protein (hRGR)| Length = 473 Score = 28.5 bits (62), Expect = 7.7 Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 7/39 (17%) Frame = +2 Query: 47 PPDSASHHPDPATQPDSRPPPGTL-------DRTDPCQG 142 PP P PA P PPPGT+ + + PC+G Sbjct: 164 PPGYLHSAPGPAPAPGEGPPPGTVLEPQSAPESSCPCRG 202
>PRPC_HUMAN (P02810) Salivary acidic proline-rich phosphoprotein 1/2 precursor| (PRP-1/PRP-2) (Parotid proline-rich protein 1/2) (Pr1/Pr2) (Protein C) (Parotid acidic protein) (Pa) (Parotid isoelectric focusing variant protein) (PIF-S) (Parotid double-band Length = 166 Score = 28.5 bits (62), Expect = 7.7 Identities = 12/33 (36%), Positives = 13/33 (39%) Frame = +2 Query: 14 HPPTHQSRGFAPPDSASHHPDPATQPDSRPPPG 112 HPP Q R PP H P +P P G Sbjct: 100 HPPPPQGRPQGPPQQGGHPRPPRGRPQGPPQQG 132
>SIAH2_XENLA (Q9I8X5) Ubiquitin ligase SIAH2 (EC 6.3.2.-) (Seven in absentia| homolog 2) (Xsiah-2) Length = 313 Score = 28.5 bits (62), Expect = 7.7 Identities = 14/44 (31%), Positives = 21/44 (47%) Frame = +1 Query: 1 ISRTPSTHPPITRICASRLRQPPPRSGDPARFATAPGNPRSDRP 132 +SR S P ++ C + + PPP P+ AT G P + P Sbjct: 1 MSRPSSAGPCASKPCGKQKQPPPPPPHAPSLPATISGGPGASAP 44
>SFR15_RAT (Q63627) Splicing factor, arginine/serine-rich 15 (CTD-binding| SR-like protein RA4) (Fragment) Length = 1048 Score = 28.5 bits (62), Expect = 7.7 Identities = 15/32 (46%), Positives = 15/32 (46%) Frame = +2 Query: 20 PTHQSRGFAPPDSASHHPDPATQPDSRPPPGT 115 P H GF PP P P T P S PPP T Sbjct: 646 PMHLPPGFLPPGP----PPPITPPVSIPPPHT 673
>SFPQ_HUMAN (P23246) Splicing factor, proline- and glutamine-rich| (Polypyrimidine tract-binding protein-associated splicing factor) (PTB-associated splicing factor) (PSF) (DNA-binding p52/p100 complex, 100 kDa subunit) (100-kDa DNA-pairing protein) (hPOMp Length = 707 Score = 28.5 bits (62), Expect = 7.7 Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 8/47 (17%) Frame = +2 Query: 17 PPTHQSRGFAPPDS------ASHHPDPATQP--DSRPPPGTLDRTDP 133 PP HQ + PP H P P QP +PPP D + P Sbjct: 63 PPPHQQQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKP 109 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.315 0.133 0.408 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,918,036 Number of Sequences: 219361 Number of extensions: 901576 Number of successful extensions: 7118 Number of sequences better than 10.0: 54 Number of HSP's better than 10.0 without gapping: 5427 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6918 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2628831825 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)
