ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl03h07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1SPEN_DROME (Q8SX83) Protein split ends 40 0.005
2MEI2_SCHPO (P08965) Meiosis protein mei2 38 0.019
3FUSIP_MOUSE (Q9R0U0) FUS-interacting serine-arginine-rich protei... 36 0.071
4FUSIP_HUMAN (O75494) FUS-interacting serine-arginine-rich protei... 36 0.071
5RBM28_HUMAN (Q9NW13) RNA-binding protein 28 (RNA-binding motif p... 36 0.071
6SNRPA_HUMAN (P09012) U1 small nuclear ribonucleoprotein A (U1 sn... 35 0.16
7SNRPA_DROME (P43332) U1 small nuclear ribonucleoprotein A (U1 sn... 35 0.16
8SEB1_SCHPO (Q9UTE3) Rpb7-binding protein seb1 35 0.16
9SRR35_HUMAN (Q8WXF0) 35 kDa SR repressor protein (SRrp35) 35 0.16
10RSD1_SCHPO (O13845) RNA-binding protein rsd1 35 0.16
11MRD1_ASPFU (Q4WJT7) Multiple RNA-binding domain-containing prote... 34 0.27
12SFRS3_MOUSE (P84104) Splicing factor, arginine/serine-rich 3 (Pr... 33 0.35
13SFRS3_HUMAN (P84103) Splicing factor, arginine/serine-rich 3 (Pr... 33 0.35
14RU17_DROME (P17133) U1 small nuclear ribonucleoprotein 70 kDa (U... 33 0.35
15RU17_ARATH (Q42404) U1 small nuclear ribonucleoprotein 70 kDa (U... 33 0.46
16RBM19_HUMAN (Q9Y4C8) Probable RNA-binding protein 19 (RNA-bindin... 33 0.46
17RSP41_ARATH (P92966) Arginine/serine-rich splicing factor RSP41 33 0.46
18DAZL_BRARE (Q9YGW7) Deleted in azoospermia-like (DAZ-like protei... 33 0.46
19SNRPA_XENLA (P45429) U1 small nuclear ribonucleoprotein A (U1 sn... 33 0.46
20RSP4_CAEEL (Q09511) Probable splicing factor, arginine/serine-ri... 33 0.46
21HRP65_CHITE (Q9U1N0) Hrp65 protein (Ct-Hrp65) 33 0.60
22MRD1_CANAL (Q5AJS6) Multiple RNA-binding domain-containing prote... 33 0.60
23NUCL_MOUSE (P09405) Nucleolin (Protein C23) 33 0.60
24RBM28_MOUSE (Q8CGC6) RNA-binding protein 28 (RNA-binding motif p... 33 0.60
25PABP3_ARATH (O64380) Polyadenylate-binding protein 3 (Poly(A)-bi... 33 0.60
26NUCL_RAT (P13383) Nucleolin (Protein C23) 33 0.60
27YCQ9_SCHPO (O13674) Hypothetical RNA-binding protein C74.09 in c... 32 0.79
28NUCL_CHICK (P15771) Nucleolin (Protein C23) 32 0.79
29RBM19_MOUSE (Q8R3C6) Probable RNA-binding protein 19 (RNA-bindin... 32 0.79
30RB15B_HUMAN (Q8NDT2) Putative RNA-binding protein 15B (RNA-bindi... 32 0.79
31RB15B_MOUSE (Q6PHZ5) Putative RNA-binding protein 15B (RNA-bindi... 32 0.79
32NUCL_MESAU (P08199) Nucleolin (Protein C23) 32 0.79
33RU2B_MOUSE (Q9CQI7) U2 small nuclear ribonucleoprotein B" 32 0.79
34RU2B_HUMAN (P08579) U2 small nuclear ribonucleoprotein B" 32 0.79
35MINT_HUMAN (Q96T58) Msx2-interacting protein (SPEN homolog) (SMA... 32 1.0
36YG41_SCHPO (O60176) Hypothetical RNA-binding protein C23E6.01c i... 32 1.0
37SNRPA_MOUSE (Q62189) U1 small nuclear ribonucleoprotein A (U1 sn... 32 1.0
38NOP12_DEBHA (Q6BTS9) Nucleolar protein 12 32 1.0
39MINT_MOUSE (Q62504) Msx2-interacting protein (SPEN homolog) (SMA... 32 1.0
40MRD1_EMENI (Q5BGA9) Multiple RNA-binding domain-containing prote... 32 1.3
41DAZL_MOUSE (Q64368) Deleted in azoospermia-like (DAZ-like autoso... 32 1.3
42DAZL_CHICK (Q804A9) Deleted in azoospermia-like (DAZ-like protein) 31 1.8
43NUCL_MACFA (Q4R4J7) Nucleolin 31 1.8
44GAR2_SCHPO (P41891) Protein gar2 31 1.8
45NUCL_PONPY (Q5RF26) Nucleolin 31 1.8
46NUCL_HUMAN (P19338) Nucleolin (Protein C23) 31 1.8
47SFRS1_ARATH (O22315) Pre-mRNA-splicing factor SF2 (SR1 protein) 31 1.8
48DAZL_MACFA (Q95192) Deleted in azoospermia-like (DAZ-like autoso... 31 1.8
49DAZL_HUMAN (Q92904) Deleted in azoospermia-like (DAZ-like autoso... 31 1.8
50SFRS2_CHICK (P30352) Splicing factor, arginine/serine-rich 2 (Sp... 31 1.8
51SFRS2_RAT (Q6PDU1) Splicing factor, arginine/serine-rich 2 (Spli... 31 2.3
52SFRS2_PANTR (Q5R1W5) Splicing factor, arginine/serine-rich 2 (Sp... 31 2.3
53SFRS2_MOUSE (Q62093) Splicing factor, arginine/serine-rich 2 (Sp... 31 2.3
54SFRS2_HUMAN (Q01130) Splicing factor, arginine/serine-rich 2 (Sp... 31 2.3
55MRD1_YARLI (Q6CEW9) Multiple RNA-binding domain-containing prote... 31 2.3
56TADBP_HUMAN (Q13148) TAR DNA-binding protein 43 (TDP-43) 31 2.3
57PM14_ARATH (Q9FMP4) Pre-mRNA branch site p14-like protein 30 3.0
58GLGB_BRAJA (Q89FD3) 1,4-alpha-glucan branching enzyme (EC 2.4.1.... 30 3.0
59DAZ2_HUMAN (Q13117) Deleted in azoospermia protein 2 30 3.0
60DAZ1_HUMAN (Q9NQZ3) Deleted in azoospermia protein 1 30 3.0
61MRD1_SCHPO (O13620) Multiple RNA-binding domain-containing prote... 30 3.0
62DAZL_CALJA (Q9BGN8) Deleted in azoospermia-like (DAZ-like autoso... 30 3.0
63DAZ3_HUMAN (Q9NR90) Deleted in azoospermia protein 3 30 3.0
64DAZ4_HUMAN (Q86SG3) Deleted in azoospermia protein 4 30 3.0
65SSP2_YEAST (Q08646) Sporulation-specific protein 2 30 3.9
66NUCL_XENLA (P20397) Nucleolin (Protein C23) 30 3.9
67LARK_DROME (Q94901) RNA-binding protein lark 30 3.9
68SLT11_EMENI (Q5AX35) Pre-mRNA-splicing factor slt11 30 3.9
69FCA_ARATH (O04425) Flowering time control protein FCA 30 5.1
70SIM_DROME (P05709) Protein single-minded 30 5.1
71PABP5_ARATH (Q05196) Polyadenylate-binding protein 5 (Poly(A)-bi... 30 5.1
72PPIL4_EMENI (Q5ARI5) Peptidyl-prolyl cis-trans isomerase-like 4 ... 29 6.7
73ELAV2_MOUSE (Q60899) ELAV-like protein 2 (Hu-antigen B) (HuB) (E... 29 6.7
74RSP31_ARATH (P92964) Arginine/serine-rich splicing factor RSP31 29 6.7
75MRD1_ASHGO (Q75A83) Multiple RNA-binding domain-containing prote... 29 6.7
76ELAV2_PONPY (Q5R9Z6) ELAV-like protein 2 29 6.7
77ELAV2_HUMAN (Q12926) ELAV-like protein 2 (Hu-antigen B) (HuB) (E... 29 6.7
78PPIL4_ASPFU (Q4WAQ9) Peptidyl-prolyl cis-trans isomerase-like 4 ... 29 6.7
79ROA1_MACMU (Q28521) Heterogeneous nuclear ribonucleoprotein A1 (... 29 8.7
80RBM4_BOVIN (Q3MHX3) RNA-binding protein 4 (RNA-binding motif pro... 29 8.7
81MRD1_YEAST (Q06106) Multiple RNA-binding domain-containing prote... 29 8.7
82RBM4_HUMAN (Q9BWF3) RNA-binding protein 4 (RNA-binding motif pro... 29 8.7
83YBKC_SCHPO (O94621) Hypothetical RNA-binding protein C1289.12 in... 29 8.7
84SNX41_ASHGO (Q759T1) Sorting nexin-41 29 8.7
85RBM4_MOUSE (Q8C7Q4) RNA-binding protein 4 (RNA-binding motif pro... 29 8.7
86RU17_XENTR (Q66II8) U1 small nuclear ribonucleoprotein 70 kDa (U... 29 8.7
87RU17_MOUSE (Q62376) U1 small nuclear ribonucleoprotein 70 kDa (U... 29 8.7
88ROC2_ARATH (Q43349) 29 kDa ribonucleoprotein, chloroplast precur... 29 8.7
89RBM4_RABIT (Q9BDY9) RNA-binding protein 4 (RNA-binding motif pro... 29 8.7
90RBM4B_HUMAN (Q9BQ04) RNA-binding protein 4B (RNA-binding motif p... 29 8.7
91PABP5_PONPY (P60050) Polyadenylate-binding protein 5 (Poly(A)-bi... 29 8.7
92PABP5_PANTR (P60049) Polyadenylate-binding protein 5 (Poly(A)-bi... 29 8.7
93PABP5_MACMU (Q7JGR2) Polyadenylate-binding protein 5 (Poly(A)-bi... 29 8.7
94PABP5_HYLLA (P60048) Polyadenylate-binding protein 5 (Poly(A)-bi... 29 8.7
95PABP5_HUMAN (Q96DU9) Polyadenylate-binding protein 5 (Poly(A)-bi... 29 8.7
96PABP5_GORGO (P60047) Polyadenylate-binding protein 5 (Poly(A)-bi... 29 8.7
97RBM4B_RAT (Q64LC9) RNA-binding protein 4B (RNA-binding motif pro... 29 8.7
98RBM4B_MOUSE (Q8VE92) RNA-binding protein 4B (RNA-binding motif p... 29 8.7
99DGTL1_MYCSM (O52199) Deoxyguanosinetriphosphate triphosphohydrol... 29 8.7
100RU17_HUMAN (P08621) U1 small nuclear ribonucleoprotein 70 kDa (U... 29 8.7
101RS9_THEAC (Q9HL08) 30S ribosomal protein S9P 29 8.7 
>SPEN_DROME (Q8SX83) Protein split ends|
          Length = 5560

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
 Frame = +3

Query: 285 YGENPSRTLFIRNINANVEDTELKLLFEQYGDIQTLYTAXQH-HGLVIISYYDIRSAERA 461
           Y    +RTLFI N+  ++   EL+  FE +G+I  +    Q  +      Y DI S  +A
Sbjct: 650 YHPKSTRTLFIGNLEKDITAGELRSHFEAFGEIIEIDIKKQGLNAYAFCQYSDIVSVVKA 709

Query: 462 MKALQASHSGSGNL 503
           M+ +   H GS  +
Sbjct: 710 MRKMDGEHLGSNRI 723
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>MEI2_SCHPO (P08965) Meiosis protein mei2|
          Length = 750

 Score = 37.7 bits (86), Expect = 0.019
 Identities = 21/61 (34%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
 Frame = +3

Query: 300 SRTLFIRNINANVEDTELKLLFEQYGDIQTLYTAX-QHHGLVIISYYDIRSAERAMKALQ 476
           SR LF+ N+   V    L  LF + GD++ + T+     G+ I++++DIR A +A K+L+
Sbjct: 194 SRYLFVTNLPRIVPYATLLELFSKLGDVKGIDTSSLSTDGICIVAFFDIRQAIQAAKSLR 253

Query: 477 A 479
           +
Sbjct: 254 S 254
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>FUSIP_MOUSE (Q9R0U0) FUS-interacting serine-arginine-rich protein 1|
           (TLS-associated protein with Ser-Arg repeats)
           (TLS-associated protein with SR repeats) (TASR)
           (TLS-associated serine-arginine protein) (TLS-associated
           SR protein) (Neural-specific SR pro
          Length = 262

 Score = 35.8 bits (81), Expect = 0.071
 Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
 Frame = +3

Query: 285 YGENPSRTLFIRNINANVEDTELKLLFEQYGDIQTLYTAXQHH-----GLVIISYYDIRS 449
           Y   P+ +LF+RN+  +    +L+  F +YG I  +Y     +     G   + + D+R 
Sbjct: 4   YLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRD 63

Query: 450 AERAMKAL 473
           AE A+  L
Sbjct: 64  AEDALHNL 71
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>FUSIP_HUMAN (O75494) FUS-interacting serine-arginine-rich protein 1|
           (TLS-associated protein with Ser-Arg repeats)
           (TLS-associated protein with SR repeats) (TASR)
           (TLS-associated serine-arginine protein) (TLS-associated
           SR protein) (40 kDa SR-repressor pr
          Length = 262

 Score = 35.8 bits (81), Expect = 0.071
 Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
 Frame = +3

Query: 285 YGENPSRTLFIRNINANVEDTELKLLFEQYGDIQTLYTAXQHH-----GLVIISYYDIRS 449
           Y   P+ +LF+RN+  +    +L+  F +YG I  +Y     +     G   + + D+R 
Sbjct: 4   YLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRD 63

Query: 450 AERAMKAL 473
           AE A+  L
Sbjct: 64  AEDALHNL 71
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>RBM28_HUMAN (Q9NW13) RNA-binding protein 28 (RNA-binding motif protein 28)|
          Length = 758

 Score = 35.8 bits (81), Expect = 0.071
 Identities = 24/110 (21%), Positives = 47/110 (42%), Gaps = 5/110 (4%)
 Frame = +3

Query: 183 STGGGMELEADENNKLLKHNGGANTGQTGLNGLPYGENPSRTLFIRNINANVEDTELKLL 362
           S   G EL   + +   + +            LP   N  +T+FIRN++ + E+ EL  L
Sbjct: 294 SIDDGEELAQSDTSTEEQEDKAVQVSNKKKRKLPSDVNEGKTVFIRNLSFDSEEEELGEL 353

Query: 363 FEQYGDIQ----TLYTAXQH-HGLVIISYYDIRSAERAMKALQASHSGSG 497
            +Q+G+++     L+   +H  G     +    +A++ + A    +   G
Sbjct: 354 LQQFGELKYVRIVLHPDTEHSKGCAFAQFMTQEAAQKCLLAASPENEAGG 403
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>SNRPA_HUMAN (P09012) U1 small nuclear ribonucleoprotein A (U1 snRNP protein A)|
           (U1A protein) (U1-A)
          Length = 281

 Score = 34.7 bits (78), Expect = 0.16
 Identities = 17/66 (25%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
 Frame = +3

Query: 297 PSRTLFIRNINANVEDTELK----LLFEQYGDIQTLYT--AXQHHGLVIISYYDIRSAER 458
           P+ T++I N+N  ++  ELK     +F Q+G I  +    + +  G   + + ++ SA  
Sbjct: 7   PNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRSLKMRGQAFVIFKEVSSATN 66

Query: 459 AMKALQ 476
           A++++Q
Sbjct: 67  ALRSMQ 72



 Score = 29.6 bits (65), Expect = 5.1
 Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
 Frame = +3

Query: 282 PYGENP-SRTLFIRNINANVEDTELKLLFEQYGDIQTLYTAXQHHGLVIISYYDIRSAER 458
           P  ENP +  LF+ N+     +  L +LF Q+   + +      H +  + + +   A  
Sbjct: 199 PLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHDIAFVEFDNEVQAGA 258

Query: 459 AMKALQ 476
           A  ALQ
Sbjct: 259 ARDALQ 264
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>SNRPA_DROME (P43332) U1 small nuclear ribonucleoprotein A (U1 snRNP protein A)|
           (U1-A) (Sex determination protein snf)
          Length = 216

 Score = 34.7 bits (78), Expect = 0.16
 Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
 Frame = +3

Query: 297 PSRTLFIRNINANVEDTELK----LLFEQYGDIQTLYT--AXQHHGLVIISYYDIRSAER 458
           P++T++I N+N  ++  ELK     +F Q+G I  +      +  G   + + +I SA  
Sbjct: 5   PNQTIYINNLNEKIKKEELKKSLYAIFSQFGQILDIVALKTLKMRGQAFVIFKEIGSASN 64

Query: 459 AMKALQ 476
           A++ +Q
Sbjct: 65  ALRTMQ 70



 Score = 29.3 bits (64), Expect = 6.7
 Identities = 13/60 (21%), Positives = 27/60 (45%)
 Frame = +3

Query: 297 PSRTLFIRNINANVEDTELKLLFEQYGDIQTLYTAXQHHGLVIISYYDIRSAERAMKALQ 476
           P++ LF+ N+     +  L +LF Q+   + +      H +  + +     +  A +ALQ
Sbjct: 140 PNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFTTELQSNAAKEALQ 199
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>SEB1_SCHPO (Q9UTE3) Rpb7-binding protein seb1|
          Length = 620

 Score = 34.7 bits (78), Expect = 0.16
 Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
 Frame = +3

Query: 300 SRTLFIRNINANVEDTELKLLFEQYGDIQTLYTAXQH-HGLVIISYYDIRSAERAMKALQ 476
           SRTLF+  I  +V +  L+ +FE++G +Q+L     + HG + +   D  +AE+A  A++
Sbjct: 405 SRTLFLGGITRSVREPVLRSMFERFGSVQSLILNHNYRHGFLKMFRRD--AAEKAQVAME 462
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>SRR35_HUMAN (Q8WXF0) 35 kDa SR repressor protein (SRrp35)|
          Length = 261

 Score = 34.7 bits (78), Expect = 0.16
 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
 Frame = +3

Query: 285 YGENPSRTLFIRNINANVEDTELKLLFEQYGDIQTLYTAXQHH-----GLVIISYYDIRS 449
           Y   P+ +LFIRN+       +L+  F +YG I  +Y     +     G   + + D+R 
Sbjct: 4   YTRPPNTSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRD 63

Query: 450 AERAM 464
           AE A+
Sbjct: 64  AEDAL 68
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>RSD1_SCHPO (O13845) RNA-binding protein rsd1|
          Length = 604

 Score = 34.7 bits (78), Expect = 0.16
 Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
 Frame = +3

Query: 291 ENPSRTLFIRNINANVEDTELKLLFEQYGDIQTLY----TAXQHHGLVIISYYDIRSAER 458
           E P   L + NI+ N+ D ++K +FE +GDI+ ++       +  G   I Y +  SA  
Sbjct: 336 EIPFHRLCVSNIHFNLTDEDVKAIFEPFGDIEFVHLQRDDQNRSKGFGYIQYRNPISARN 395

Query: 459 AMKALQASHSGSGNLNTLL 515
           A++ +        N+   L
Sbjct: 396 ALEKMNGFDLAGRNMRVCL 414
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>MRD1_ASPFU (Q4WJT7) Multiple RNA-binding domain-containing protein 1|
          Length = 825

 Score = 33.9 bits (76), Expect = 0.27
 Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
 Frame = +3

Query: 300 SRTLFIRNINANVEDTELKLLFEQYGDIQTLYTA-----XQHHGLVIISYYDIRSAERAM 464
           S  LF+RN+  +  +++L+ +F ++G I+ ++ A         G   + Y +  +A +A 
Sbjct: 300 SSRLFVRNLPYDASESDLEPVFSKFGKIEEIHVAFDTRSTTSKGFAYVQYIEPDAAVQAY 359

Query: 465 KALQASH 485
           K L   H
Sbjct: 360 KELDGKH 366
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>SFRS3_MOUSE (P84104) Splicing factor, arginine/serine-rich 3 (Pre-mRNA-splicing|
           factor SRP20) (X16 protein)
          Length = 164

 Score = 33.5 bits (75), Expect = 0.35
 Identities = 15/55 (27%), Positives = 29/55 (52%)
 Frame = +3

Query: 309 LFIRNINANVEDTELKLLFEQYGDIQTLYTAXQHHGLVIISYYDIRSAERAMKAL 473
           +++ N+  N   TEL+  F  YG +++++ A    G   + + D R A  A++ L
Sbjct: 12  VYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVREL 66
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>SFRS3_HUMAN (P84103) Splicing factor, arginine/serine-rich 3 (Pre-mRNA-splicing|
           factor SRP20)
          Length = 164

 Score = 33.5 bits (75), Expect = 0.35
 Identities = 15/55 (27%), Positives = 29/55 (52%)
 Frame = +3

Query: 309 LFIRNINANVEDTELKLLFEQYGDIQTLYTAXQHHGLVIISYYDIRSAERAMKAL 473
           +++ N+  N   TEL+  F  YG +++++ A    G   + + D R A  A++ L
Sbjct: 12  VYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVREL 66
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>RU17_DROME (P17133) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70|
           kDa) (snRNP70)
          Length = 448

 Score = 33.5 bits (75), Expect = 0.35
 Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
 Frame = +3

Query: 291 ENPSRTLFIRNINANVEDTELKLLFEQYGDIQTL-----YTAXQHHGLVIISYYDIRSAE 455
           E+P RTLFI  IN +  +++L+  FE YG I+ +       + +  G   I Y   R   
Sbjct: 98  EDPFRTLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGYAFIEYEHERDMH 157

Query: 456 RAMK 467
            A K
Sbjct: 158 AAYK 161
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>RU17_ARATH (Q42404) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70|
           kDa) (snRNP70) (U1-70K)
          Length = 427

 Score = 33.1 bits (74), Expect = 0.46
 Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 5/96 (5%)
 Frame = +3

Query: 195 GMELEADENNKLLKHNGGANTGQTGLNGLPYGENPSRTLFIRNINANVEDTELKLLFEQY 374
           G+E  A++  K   +N    TG           +P +TLF+  +N    ++++K  FE Y
Sbjct: 113 GVEKAAEDLKKYDPNNDPNATG-----------DPYKTLFVSRLNYESSESKIKREFESY 161

Query: 375 GDIQTLYTAXQH-----HGLVIISYYDIRSAERAMK 467
           G I+ ++           G   I Y   R  + A K
Sbjct: 162 GPIKRVHLVTDQLTNKPKGYAFIEYMHTRDMKAAYK 197
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>RBM19_HUMAN (Q9Y4C8) Probable RNA-binding protein 19 (RNA-binding motif protein|
           19)
          Length = 960

 Score = 33.1 bits (74), Expect = 0.46
 Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
 Frame = +3

Query: 297 PSRTLFIRNINANVEDTELKLLFEQYGDIQTLYTAXQHH--------GLVIISYYDIRSA 452
           P  TLFI+N+N +  + +LK +F + G +++   + + +        G   + Y     A
Sbjct: 728 PGCTLFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQA 787

Query: 453 ERAMKALQ 476
           ++A+K LQ
Sbjct: 788 QKALKQLQ 795
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>RSP41_ARATH (P92966) Arginine/serine-rich splicing factor RSP41|
          Length = 356

 Score = 33.1 bits (74), Expect = 0.46
 Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 2/101 (1%)
 Frame = +3

Query: 186 TGGGMELEADENNKL-LKHNGGANTGQTGLNGLPYGENPSRTLFIRNINA-NVEDTELKL 359
           TG  + +E  +N++     +GG+    +GL        PS+TLF+ N +A N    +L+ 
Sbjct: 63  TGRRLRVEWTKNDRGGAGRSGGSRRSSSGLR-------PSKTLFVINFDAQNTRTRDLER 115

Query: 360 LFEQYGDIQTLYTAXQHHGLVIISYYDIRSAERAMKALQAS 482
            FE YG I  +           I Y     A RA+ A  +S
Sbjct: 116 HFEPYGKIVNVRI---RRNFAFIQYEAQEDATRALDATNSS 153
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>DAZL_BRARE (Q9YGW7) Deleted in azoospermia-like (DAZ-like protein) (zDazl)|
          Length = 229

 Score = 33.1 bits (74), Expect = 0.46
 Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
 Frame = +3

Query: 234 KHNGGANTGQTGLNG--LPYGENPSRTLFIRNINANVEDTELKLLFEQYGDIQTLYTAXQ 407
           KH  G  +     NG  LP G+    TLF+  I+  V++ E++  F +YG ++ +     
Sbjct: 22  KHRQGFPSSLKLSNGYILPEGKMTPNTLFVGGIDMKVDENEIREFFAKYGSVKEVKIITY 81

Query: 408 HHGL 419
             G+
Sbjct: 82  RGGI 85
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>SNRPA_XENLA (P45429) U1 small nuclear ribonucleoprotein A (U1 snRNP protein A)|
           (U1A protein) (U1-A)
          Length = 282

 Score = 33.1 bits (74), Expect = 0.46
 Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
 Frame = +3

Query: 297 PSRTLFIRNINANVEDTELK----LLFEQYGDIQTLYTA--XQHHGLVIISYYDIRSAER 458
           P+ T++I N+N  ++  ELK     +F Q+G I  +  +   +  G   + + +  SA  
Sbjct: 8   PNNTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRNLKMRGQAFVIFKETSSATN 67

Query: 459 AMKALQ 476
           A++++Q
Sbjct: 68  ALRSMQ 73



 Score = 29.3 bits (64), Expect = 6.7
 Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
 Frame = +3

Query: 282 PYGENP-SRTLFIRNINANVEDTELKLLFEQYGDIQTLYTAXQHHGLVIISYYDIRSAER 458
           P  ENP +  LF+ N+     +  L +LF Q+   + +      H +  + + +   A  
Sbjct: 200 PISENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHDIAFVEFDNEVQAGA 259

Query: 459 AMKALQ 476
           A ++LQ
Sbjct: 260 ARESLQ 265
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>RSP4_CAEEL (Q09511) Probable splicing factor, arginine/serine-rich 4|
           (RNA-binding protein srp-2) (CeSC35)
          Length = 196

 Score = 33.1 bits (74), Expect = 0.46
 Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
 Frame = +3

Query: 243 GGANTGQTGLNGLPYGENPSRTLFIRNINANVEDTELKLLFEQYGDIQTLYT-----AXQ 407
           GG       +NGL        +L I N++      +L+  FE+YGDI  ++      + Q
Sbjct: 6   GGDRRAAPDINGLT-------SLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQ 58

Query: 408 HHGLVIISYYDIRSAERAM 464
             G   + +Y+ R AE A+
Sbjct: 59  SKGFGFVRFYERRDAEHAL 77
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>HRP65_CHITE (Q9U1N0) Hrp65 protein (Ct-Hrp65)|
          Length = 535

 Score = 32.7 bits (73), Expect = 0.60
 Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
 Frame = +3

Query: 309 LFIRNINANVEDTELKLLFEQYGDI-QTLYTAXQHHGLVIISYYDIRSAERAMKAL 473
           L+I N+ ++V + ELK LF  YG+I +    A ++   + I Y    +AERA K L
Sbjct: 115 LYIGNLTSDVTEEELKELFSPYGEISEAFINAEKNFAFLKIDYR--ANAERAKKDL 168
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>MRD1_CANAL (Q5AJS6) Multiple RNA-binding domain-containing protein 1|
          Length = 841

 Score = 32.7 bits (73), Expect = 0.60
 Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
 Frame = +3

Query: 309 LFIRNINANVEDTELKLLFEQYGDIQTLYTA-----XQHHGLVIISYYDIRSAERAMKAL 473
           LFIRNI+    + + + LF QYG ++ ++ A      +  G + + +     A RA ++L
Sbjct: 312 LFIRNISYEASEEDFRSLFSQYGALEEVHIAIDTRTGKSKGFLYVQFLKKEDATRAYRSL 371
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>NUCL_MOUSE (P09405) Nucleolin (Protein C23)|
          Length = 706

 Score = 32.7 bits (73), Expect = 0.60
 Identities = 16/61 (26%), Positives = 33/61 (54%)
 Frame = +3

Query: 300 SRTLFIRNINANVEDTELKLLFEQYGDIQTLYTAXQHHGLVIISYYDIRSAERAMKALQA 479
           +RTL  +N++ N+ + ELK +FE   +I+ +    +  G+  I +     AE+ ++  Q 
Sbjct: 393 ARTLLAKNLSFNITEDELKEVFEDAMEIRLVSQDGKSKGIAYIEFKSEADAEKNLEEKQG 452

Query: 480 S 482
           +
Sbjct: 453 A 453



 Score = 28.9 bits (63), Expect = 8.7
 Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 3/84 (3%)
 Frame = +3

Query: 270 LNGLPYGENPSRTLFIRNINANVEDTELKLLFEQYGDIQTLYTAXQHHGLVI-ISYYDIR 446
           L G      PS+TLF++ ++ +  +  LK  FE  G ++      +  G      + D  
Sbjct: 557 LQGSNSRSQPSKTLFVKGLSEDTTEETLKESFE--GSVRARIVTDRETGSSKGFGFVDFN 614

Query: 447 SAERAMKALQASHSG--SGNLNTL 512
           S E A  A +A   G   GN  TL
Sbjct: 615 SEEDAKAAKEAMEDGEIDGNKVTL 638
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>RBM28_MOUSE (Q8CGC6) RNA-binding protein 28 (RNA-binding motif protein 28)|
          Length = 749

 Score = 32.7 bits (73), Expect = 0.60
 Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
 Frame = +3

Query: 279 LPYGENPSRTLFIRNINANVEDTELKLLFEQYGDIQ----TLYTAXQH-HGLVIISYYDI 443
           LP      +T+FIRN++ + E+  L  + +Q+GD++     L+   +H  G     +   
Sbjct: 316 LPSDVTEGKTVFIRNLSFDSEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQ 375

Query: 444 RSAERAMKALQASHSGSG 497
            +A++ + A      G G
Sbjct: 376 EAAQKCLAAASPEAEGGG 393
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>PABP3_ARATH (O64380) Polyadenylate-binding protein 3 (Poly(A)-binding protein|
           3) (PABP 3)
          Length = 660

 Score = 32.7 bits (73), Expect = 0.60
 Identities = 16/73 (21%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
 Frame = +3

Query: 285 YGENPSRTLFIRNINANVEDTELKLLFEQYGDIQT----LYTAXQHHGLVIISYYDIRSA 452
           + ++    L+++N++ +V+D +LK +F +YG++ +    L       G   ++Y +   A
Sbjct: 326 FEKSQGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEA 385

Query: 453 ERAMKALQASHSG 491
            RA+  +     G
Sbjct: 386 LRALSEMNGKMIG 398
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>NUCL_RAT (P13383) Nucleolin (Protein C23)|
          Length = 712

 Score = 32.7 bits (73), Expect = 0.60
 Identities = 16/61 (26%), Positives = 33/61 (54%)
 Frame = +3

Query: 300 SRTLFIRNINANVEDTELKLLFEQYGDIQTLYTAXQHHGLVIISYYDIRSAERAMKALQA 479
           +RTL  +N++ N+ + ELK +FE   +I+ +    +  G+  I +     AE+ ++  Q 
Sbjct: 395 ARTLLAKNLSFNITEDELKEVFEDAVEIRLVSQDGRSKGIAYIEFKSEADAEKNLEEKQG 454

Query: 480 S 482
           +
Sbjct: 455 A 455
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>YCQ9_SCHPO (O13674) Hypothetical RNA-binding protein C74.09 in chromosome III|
          Length = 654

 Score = 32.3 bits (72), Expect = 0.79
 Identities = 18/59 (30%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
 Frame = +3

Query: 300 SRTLFIRNINANVEDTELKLLFEQYGDIQTL-YTAXQHHGLVIISYYDIRSAERAMKAL 473
           SR ++  +I+ ++   EL+L+  QYG+I+++ Y   +  G V  +Y +I +A +A+  L
Sbjct: 499 SRNVYFSHISDSLTTEELELILRQYGEIESIKYLKNRSSGFV--AYTNISNAMKAVNGL 555
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>NUCL_CHICK (P15771) Nucleolin (Protein C23)|
          Length = 694

 Score = 32.3 bits (72), Expect = 0.79
 Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
 Frame = +3

Query: 291 ENPSRTLFIRNINANVEDTELKLLFEQYGDIQ-TLYTAXQHHGLVIISYYDIRSAERAMK 467
           E  +RTLF++N+   V + E+K +FE   +++  L       G+  I +     AE+A++
Sbjct: 367 ERDARTLFVKNLPYRVTEDEMKNVFENALEVRLVLNKEGSSKGMAYIEFKTEAEAEKALE 426

Query: 468 ALQAS 482
             Q +
Sbjct: 427 EKQGT 431
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>RBM19_MOUSE (Q8R3C6) Probable RNA-binding protein 19 (RNA-binding motif protein|
           19)
          Length = 952

 Score = 32.3 bits (72), Expect = 0.79
 Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 8/76 (10%)
 Frame = +3

Query: 297 PSRTLFIRNINANVEDTELKLLFEQYGDIQTLYTAXQHH--------GLVIISYYDIRSA 452
           P  TLFI+N+N +  +  LK +F + G I++   + + +        G   + Y     A
Sbjct: 720 PGCTLFIKNLNFSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQA 779

Query: 453 ERAMKALQASHSGSGN 500
           ++A+K LQ  H+  G+
Sbjct: 780 QKALKQLQ-GHTVDGH 794
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>RB15B_HUMAN (Q8NDT2) Putative RNA-binding protein 15B (RNA-binding motif|
           protein 15B)
          Length = 563

 Score = 32.3 bits (72), Expect = 0.79
 Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
 Frame = +3

Query: 291 ENPSRTLFIRNINANVEDTELKLLFEQYGDIQTLYTAXQHHG----LVIISYYDIRSAER 458
           +  +R LFI N++ +V + EL+  FE+YG I+ +       G       + + ++  A R
Sbjct: 6   QRATRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLDMAHR 65

Query: 459 AMKAL 473
           A  A+
Sbjct: 66  AKVAM 70
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>RB15B_MOUSE (Q6PHZ5) Putative RNA-binding protein 15B (RNA-binding motif|
           protein 15B)
          Length = 564

 Score = 32.3 bits (72), Expect = 0.79
 Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
 Frame = +3

Query: 291 ENPSRTLFIRNINANVEDTELKLLFEQYGDIQTLYTAXQHHG----LVIISYYDIRSAER 458
           +  +R LFI N++ +V + EL+  FE+YG I+ +       G       + + ++  A R
Sbjct: 6   QRATRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLDMAHR 65

Query: 459 AMKAL 473
           A  A+
Sbjct: 66  AKVAM 70
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>NUCL_MESAU (P08199) Nucleolin (Protein C23)|
          Length = 713

 Score = 32.3 bits (72), Expect = 0.79
 Identities = 16/61 (26%), Positives = 33/61 (54%)
 Frame = +3

Query: 300 SRTLFIRNINANVEDTELKLLFEQYGDIQTLYTAXQHHGLVIISYYDIRSAERAMKALQA 479
           +RTL  +N++ N+ + ELK +FE   +I+ +    +  G+  I +     AE+ ++  Q 
Sbjct: 392 ARTLLAKNLSFNITEDELKEVFEDALEIRLVSQDGKSKGIAYIEFKSEADAEKNLEEKQG 451

Query: 480 S 482
           +
Sbjct: 452 A 452
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>RU2B_MOUSE (Q9CQI7) U2 small nuclear ribonucleoprotein B"|
          Length = 225

 Score = 32.3 bits (72), Expect = 0.79
 Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
 Frame = +3

Query: 297 PSRTLFIRNINANVEDTELK----LLFEQYG---DIQTLYTAXQHHGLVIISYYDIRSAE 455
           P+ T++I N+N  ++  ELK     LF Q+G   DI  L T  +  G   + + ++ S+ 
Sbjct: 5   PNHTIYINNMNDKIKKEELKRSLYALFSQFGHVVDIVALKT-MKMRGQAFVIFKELGSST 63

Query: 456 RAMKALQ 476
            A++ LQ
Sbjct: 64  NALRQLQ 70
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>RU2B_HUMAN (P08579) U2 small nuclear ribonucleoprotein B"|
          Length = 225

 Score = 32.3 bits (72), Expect = 0.79
 Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
 Frame = +3

Query: 297 PSRTLFIRNINANVEDTELK----LLFEQYG---DIQTLYTAXQHHGLVIISYYDIRSAE 455
           P+ T++I N+N  ++  ELK     LF Q+G   DI  L T  +  G   + + ++ S+ 
Sbjct: 5   PNHTIYINNMNDKIKKEELKRSLYALFSQFGHVVDIVALKT-MKMRGQAFVIFKELGSST 63

Query: 456 RAMKALQ 476
            A++ LQ
Sbjct: 64  NALRQLQ 70



 Score = 28.9 bits (63), Expect = 8.7
 Identities = 19/82 (23%), Positives = 33/82 (40%), Gaps = 4/82 (4%)
 Frame = +3

Query: 243 GGANTGQTGLNGLPYGE----NPSRTLFIRNINANVEDTELKLLFEQYGDIQTLYTAXQH 410
           G  N+  T  N  P  +     P+  LF+ N+     +  L +LF Q+   + +      
Sbjct: 127 GTPNSANTQGNSTPNPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGR 186

Query: 411 HGLVIISYYDIRSAERAMKALQ 476
           H +  + + +   A  A  ALQ
Sbjct: 187 HDIAFVEFENDGQAGAARDALQ 208
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>MINT_HUMAN (Q96T58) Msx2-interacting protein (SPEN homolog)|
           (SMART/HDAC1-associated repressor protein)
          Length = 3664

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
 Frame = +3

Query: 300 SRTLFIRNINANVEDTELKLLFEQYG-----DIQTLYTAXQHHGLVIISYYDIRSAERAM 464
           +RTLFI N+       +L+ +F+++G     DI+ +    Q+     + Y DI S  +A+
Sbjct: 437 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQY---AFLQYCDIASVCKAI 493

Query: 465 KALQASHSGSGNL 503
           K +   + G+  L
Sbjct: 494 KKMDGEYLGNNRL 506
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>YG41_SCHPO (O60176) Hypothetical RNA-binding protein C23E6.01c in chromosome|
           II
          Length = 473

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 18/73 (24%), Positives = 36/73 (49%)
 Frame = +3

Query: 285 YGENPSRTLFIRNINANVEDTELKLLFEQYGDIQTLYTAXQHHGLVIISYYDIRSAERAM 464
           + +  + T+F+  ++  V + ELK LF+ +G+I          G   + + + +SAE A+
Sbjct: 297 FADTANSTVFVGGLSKFVSEEELKYLFQNFGEI-VYVKIPPGKGCGFVQFVNRQSAEIAI 355

Query: 465 KALQASHSGSGNL 503
             LQ    G+  +
Sbjct: 356 NQLQGYPLGNSRI 368
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>SNRPA_MOUSE (Q62189) U1 small nuclear ribonucleoprotein A (U1 snRNP protein A)|
           (U1A protein) (U1-A)
          Length = 286

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 16/65 (24%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
 Frame = +3

Query: 300 SRTLFIRNINANVEDTELK----LLFEQYGDIQTLYTA--XQHHGLVIISYYDIRSAERA 461
           + T++I N+N  ++  ELK     +F Q+G I  +  +   +  G   + + ++ SA  A
Sbjct: 14  NHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRIMKMRGQAFVIFKEVTSATNA 73

Query: 462 MKALQ 476
           ++++Q
Sbjct: 74  LRSMQ 78



 Score = 29.6 bits (65), Expect = 5.1
 Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
 Frame = +3

Query: 282 PYGENP-SRTLFIRNINANVEDTELKLLFEQYGDIQTLYTAXQHHGLVIISYYDIRSAER 458
           P  ENP +  LF+ N+     +  L +LF Q+   + +      H +  + + +   A  
Sbjct: 204 PLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHDIAFVEFDNEVQAGA 263

Query: 459 AMKALQ 476
           A  ALQ
Sbjct: 264 ARDALQ 269
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>NOP12_DEBHA (Q6BTS9) Nucleolar protein 12|
          Length = 462

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 5/39 (12%)
 Frame = +3

Query: 291 ENPSRTLFIRNINANVEDT-----ELKLLFEQYGDIQTL 392
           E   RT+F+ N+NA+V  +     + K LF QYG IQ++
Sbjct: 155 EKAERTVFVGNVNASVVGSKPMYKKFKKLFSQYGKIQSI 193
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>MINT_MOUSE (Q62504) Msx2-interacting protein (SPEN homolog)|
           (SMART/HDAC1-associated repressor protein)
          Length = 3644

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
 Frame = +3

Query: 300 SRTLFIRNINANVEDTELKLLFEQYG-----DIQTLYTAXQHHGLVIISYYDIRSAERAM 464
           +RTLFI N+       +L+ +F+++G     DI+ +    Q+     + Y DI S  +A+
Sbjct: 438 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQY---AFLQYCDIASVCKAI 494

Query: 465 KALQASHSGSGNL 503
           K +   + G+  L
Sbjct: 495 KKMDGEYLGNNRL 507
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>MRD1_EMENI (Q5BGA9) Multiple RNA-binding domain-containing protein 1|
          Length = 819

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
 Frame = +3

Query: 300 SRTLFIRNINANVEDTELKLLFEQYGDIQTLYTA-----XQHHGLVIISYYDIRSAERAM 464
           S  LF+RN++   +++EL+ +F  +G I+ ++ A         G   + Y D  +A  A 
Sbjct: 294 SARLFVRNLSYETKESELEPVFSPFGKIEEIHVAFDTRFTTSKGFAYVQYADPDAAVEAY 353

Query: 465 KAL 473
           + L
Sbjct: 354 RNL 356
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>DAZL_MOUSE (Q64368) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted|
           in azoospermia-like 1)
          Length = 298

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 14/58 (24%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
 Frame = +3

Query: 279 LPYGENPSRTLFIRNINANVEDTELKLLFEQYGDIQTLYTAXQHHGLV----IISYYD 440
           LP G+    T+F+  I+  +++TE++  F +YG ++ +       G+      +S+Y+
Sbjct: 32  LPEGKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFYN 89
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>DAZL_CHICK (Q804A9) Deleted in azoospermia-like (DAZ-like protein)|
          Length = 289

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 13/47 (27%), Positives = 25/47 (53%)
 Frame = +3

Query: 279 LPYGENPSRTLFIRNINANVEDTELKLLFEQYGDIQTLYTAXQHHGL 419
           LP G+    T+F+  I+  + + E++  FEQYG ++ +       G+
Sbjct: 28  LPEGKIMPNTVFVGGIDIRMNEAEIRSYFEQYGTVKEVKIITDRTGV 74
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>NUCL_MACFA (Q4R4J7) Nucleolin|
          Length = 710

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 17/64 (26%), Positives = 30/64 (46%)
 Frame = +3

Query: 291 ENPSRTLFIRNINANVEDTELKLLFEQYGDIQTLYTAXQHHGLVIISYYDIRSAERAMKA 470
           E  +RTL  +N+   V   ELK +FE   +I+ +    +  G+  I +     AE+  + 
Sbjct: 389 ERDARTLLAKNLPYKVTQDELKEVFEDAAEIRLVSKDGKSKGIAYIEFKTEADAEKTFEE 448

Query: 471 LQAS 482
            Q +
Sbjct: 449 KQGT 452
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>GAR2_SCHPO (P41891) Protein gar2|
          Length = 500

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
 Frame = +3

Query: 297 PSRTLFIRNINANVEDTELKLLFEQYGDIQTLY-----TAXQHHGLVIISYYDIRSAERA 461
           PS T+F+ N++ N  + +L   F   GDIQ++       + +  G   +++ DI SA++ 
Sbjct: 364 PSDTVFVGNLSFNATEDDLSTAFGGCGDIQSIRLPTDPQSGRLKGFGYVTFSDIDSAKKC 423

Query: 462 MK 467
           ++
Sbjct: 424 VE 425
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>NUCL_PONPY (Q5RF26) Nucleolin|
          Length = 711

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 17/64 (26%), Positives = 30/64 (46%)
 Frame = +3

Query: 291 ENPSRTLFIRNINANVEDTELKLLFEQYGDIQTLYTAXQHHGLVIISYYDIRSAERAMKA 470
           E  +RTL  +N+   V   ELK +FE   +I+ +    +  G+  I +     AE+  + 
Sbjct: 390 ERDARTLLAKNLPYKVTQDELKEVFEDAAEIRLVSKDGKSKGIAYIEFKTEADAEKTFEE 449

Query: 471 LQAS 482
            Q +
Sbjct: 450 KQGT 453
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>NUCL_HUMAN (P19338) Nucleolin (Protein C23)|
          Length = 709

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 17/64 (26%), Positives = 30/64 (46%)
 Frame = +3

Query: 291 ENPSRTLFIRNINANVEDTELKLLFEQYGDIQTLYTAXQHHGLVIISYYDIRSAERAMKA 470
           E  +RTL  +N+   V   ELK +FE   +I+ +    +  G+  I +     AE+  + 
Sbjct: 388 ERDARTLLAKNLPYKVTQDELKEVFEDAAEIRLVSKDGKSKGIAYIEFKTEADAEKTFEE 447

Query: 471 LQAS 482
            Q +
Sbjct: 448 KQGT 451
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>SFRS1_ARATH (O22315) Pre-mRNA-splicing factor SF2 (SR1 protein)|
          Length = 303

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
 Frame = +3

Query: 300 SRTLFIRNINANVEDTELKLLFEQYGDIQ--TLYTAXQHHGLVIISYYDIRSAERAM 464
           SRT+++ N+  ++ + E++ LF +YG +    L    +  G   + + D R AE A+
Sbjct: 6   SRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAI 62
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>DAZL_MACFA (Q95192) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted|
           in azoospermia-like 1)
          Length = 295

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 12/47 (25%), Positives = 26/47 (55%)
 Frame = +3

Query: 279 LPYGENPSRTLFIRNINANVEDTELKLLFEQYGDIQTLYTAXQHHGL 419
           LP G+    T+F+  I+  +++TE++  F +YG ++ +       G+
Sbjct: 32  LPEGKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGV 78
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>DAZL_HUMAN (Q92904) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted|
           in azoospermia-like 1) (DAZ homolog)
           (SPGY-like-autosomal)
          Length = 295

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 12/47 (25%), Positives = 26/47 (55%)
 Frame = +3

Query: 279 LPYGENPSRTLFIRNINANVEDTELKLLFEQYGDIQTLYTAXQHHGL 419
           LP G+    T+F+  I+  +++TE++  F +YG ++ +       G+
Sbjct: 32  LPEGKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGV 78
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>SFRS2_CHICK (P30352) Splicing factor, arginine/serine-rich 2 (Splicing factor|
           SC35) (SC-35) (Splicing component, 35 kDa) (PR264
           protein)
          Length = 221

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 10/78 (12%)
 Frame = +3

Query: 279 LPYGENPS-----RTLFIRNINANVEDTELKLLFEQYGDIQTLYT-----AXQHHGLVII 428
           + YG  P       +L + N+        L+ +FE+YG +  +Y        +  G   +
Sbjct: 1   MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60

Query: 429 SYYDIRSAERAMKALQAS 482
            ++D R AE AM A+  +
Sbjct: 61  RFHDKRDAEDAMDAMDGA 78
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>SFRS2_RAT (Q6PDU1) Splicing factor, arginine/serine-rich 2 (Splicing factor|
           SC35) (SC-35) (Splicing component, 35 kDa)
          Length = 220

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
 Frame = +3

Query: 306 TLFIRNINANVEDTELKLLFEQYGDIQTLYT-----AXQHHGLVIISYYDIRSAERAMKA 470
           +L + N+        L+ +FE+YG +  +Y        +  G   + ++D R AE AM A
Sbjct: 14  SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDA 73

Query: 471 LQAS 482
           +  +
Sbjct: 74  MDGA 77
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>SFRS2_PANTR (Q5R1W5) Splicing factor, arginine/serine-rich 2 (Splicing factor|
           SC35) (SC-35) (Splicing component, 35 kDa)
          Length = 220

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
 Frame = +3

Query: 306 TLFIRNINANVEDTELKLLFEQYGDIQTLYT-----AXQHHGLVIISYYDIRSAERAMKA 470
           +L + N+        L+ +FE+YG +  +Y        +  G   + ++D R AE AM A
Sbjct: 14  SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDA 73

Query: 471 LQAS 482
           +  +
Sbjct: 74  MDGA 77
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>SFRS2_MOUSE (Q62093) Splicing factor, arginine/serine-rich 2 (Splicing factor|
           SC35) (SC-35) (Splicing component, 35 kDa) (PR264
           protein) (Putative myelin regulatory factor 1) (MRF-1)
          Length = 220

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
 Frame = +3

Query: 306 TLFIRNINANVEDTELKLLFEQYGDIQTLYT-----AXQHHGLVIISYYDIRSAERAMKA 470
           +L + N+        L+ +FE+YG +  +Y        +  G   + ++D R AE AM A
Sbjct: 14  SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDA 73

Query: 471 LQAS 482
           +  +
Sbjct: 74  MDGA 77
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>SFRS2_HUMAN (Q01130) Splicing factor, arginine/serine-rich 2 (Splicing factor|
           SC35) (SC-35) (Splicing component, 35 kDa) (PR264
           protein)
          Length = 220

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
 Frame = +3

Query: 306 TLFIRNINANVEDTELKLLFEQYGDIQTLYT-----AXQHHGLVIISYYDIRSAERAMKA 470
           +L + N+        L+ +FE+YG +  +Y        +  G   + ++D R AE AM A
Sbjct: 14  SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDA 73

Query: 471 LQAS 482
           +  +
Sbjct: 74  MDGA 77
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>MRD1_YARLI (Q6CEW9) Multiple RNA-binding domain-containing protein 1|
          Length = 828

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 26/108 (24%), Positives = 42/108 (38%), Gaps = 18/108 (16%)
 Frame = +3

Query: 201 ELEADENNKLL--KHNGGANTGQTGLNGLPYGENPSRT-----------LFIRNINANVE 341
           E E D  N+    K  G    G       P  E PS             LF+RN+    +
Sbjct: 254 EPEEDRENRHTESKSEGKKGKGNAPKAATPVDEEPSEDPTIVSIRKTGRLFLRNLLYTAK 313

Query: 342 DTELKLLFEQYGDIQTLY-----TAXQHHGLVIISYYDIRSAERAMKA 470
           + + + LF QYG+++ ++        Q  G   + + D  +A  A +A
Sbjct: 314 EEDFRQLFSQYGELEEVHLPINTKTGQCKGFAHVQFEDPENAIAAYEA 361
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>TADBP_HUMAN (Q13148) TAR DNA-binding protein 43 (TDP-43)|
          Length = 414

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 12/52 (23%), Positives = 26/52 (50%)
 Frame = +3

Query: 300 SRTLFIRNINANVEDTELKLLFEQYGDIQTLYTAXQHHGLVIISYYDIRSAE 455
           SR +F+     ++ + EL+  F QYGD+  ++          +++ D + A+
Sbjct: 190 SRKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQ 241
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>PM14_ARATH (Q9FMP4) Pre-mRNA branch site p14-like protein|
          Length = 124

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
 Frame = +3

Query: 300 SRTLFIRNINANVEDTELKLLFEQYGDIQTLYTAXQH--HGLVIISYYDIRSAERAMKAL 473
           +R L++RN+  N+   E+  +F +YG I+ +         G   + Y DI  A+ A+  L
Sbjct: 18  NRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGCDKATKGTAFVVYEDIYDAKNAVDHL 77
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>GLGB_BRAJA (Q89FD3) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Glycogen|
           branching enzyme) (BE)
           (1,4-alpha-D-glucan:1,4-alpha-D-glucan
           6-glucosyl-transferase)
          Length = 721

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -2

Query: 474 EALSWHVLRILYHSKILSLNHDVXRQCKVFGCLH 373
           ++L WH+L   YHS I +L  D+ R  +    LH
Sbjct: 581 QSLDWHLLEYKYHSGIQALIRDLNRLYRAVPALH 614
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>DAZ2_HUMAN (Q13117) Deleted in azoospermia protein 2|
          Length = 558

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 13/47 (27%), Positives = 26/47 (55%)
 Frame = +3

Query: 279 LPYGENPSRTLFIRNINANVEDTELKLLFEQYGDIQTLYTAXQHHGL 419
           LP G+    T+F+  I+A +++TE+   F +YG ++ +       G+
Sbjct: 32  LPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGV 78
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>DAZ1_HUMAN (Q9NQZ3) Deleted in azoospermia protein 1|
          Length = 744

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 13/47 (27%), Positives = 26/47 (55%)
 Frame = +3

Query: 279 LPYGENPSRTLFIRNINANVEDTELKLLFEQYGDIQTLYTAXQHHGL 419
           LP G+    T+F+  I+A +++TE+   F +YG ++ +       G+
Sbjct: 362 LPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGV 408



 Score = 30.4 bits (67), Expect = 3.0
 Identities = 13/47 (27%), Positives = 26/47 (55%)
 Frame = +3

Query: 279 LPYGENPSRTLFIRNINANVEDTELKLLFEQYGDIQTLYTAXQHHGL 419
           LP G+    T+F+  I+A +++TE+   F +YG ++ +       G+
Sbjct: 197 LPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGV 243



 Score = 30.4 bits (67), Expect = 3.0
 Identities = 13/47 (27%), Positives = 26/47 (55%)
 Frame = +3

Query: 279 LPYGENPSRTLFIRNINANVEDTELKLLFEQYGDIQTLYTAXQHHGL 419
           LP G+    T+F+  I+A +++TE+   F +YG ++ +       G+
Sbjct: 32  LPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGV 78
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>MRD1_SCHPO (O13620) Multiple RNA-binding domain-containing protein 1|
          Length = 833

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
 Frame = +3

Query: 300 SRTLFIRNINANVEDTELKLLFEQYGDIQTLY-----TAXQHHGLVIISYYDIRSAERAM 464
           ++ LF+RN+  +  + +LK LF  +G ++ ++           G   I ++D   A RA 
Sbjct: 322 TKRLFLRNLTYSCAEDDLKSLFGPFGQLEQVHMPIDKKTNNPKGFAYIDFHDADDAVRAY 381

Query: 465 KALQA 479
             L A
Sbjct: 382 LELDA 386
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>DAZL_CALJA (Q9BGN8) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted|
           in azoospermia-like 1)
          Length = 296

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 12/47 (25%), Positives = 26/47 (55%)
 Frame = +3

Query: 279 LPYGENPSRTLFIRNINANVEDTELKLLFEQYGDIQTLYTAXQHHGL 419
           LP G+    T+F+  I+  +++TE++  F +YG ++ +       G+
Sbjct: 32  LPEGKIMPNTVFVGGIDVRMDETEIRGFFARYGSVKEVKIITDRTGV 78
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>DAZ3_HUMAN (Q9NR90) Deleted in azoospermia protein 3|
          Length = 486

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 13/47 (27%), Positives = 26/47 (55%)
 Frame = +3

Query: 279 LPYGENPSRTLFIRNINANVEDTELKLLFEQYGDIQTLYTAXQHHGL 419
           LP G+    T+F+  I+A +++TE+   F +YG ++ +       G+
Sbjct: 32  LPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGV 78
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>DAZ4_HUMAN (Q86SG3) Deleted in azoospermia protein 4|
          Length = 579

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 13/47 (27%), Positives = 26/47 (55%)
 Frame = +3

Query: 279 LPYGENPSRTLFIRNINANVEDTELKLLFEQYGDIQTLYTAXQHHGL 419
           LP G+    T+F+  I+A +++TE+   F +YG ++ +       G+
Sbjct: 197 LPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGV 243



 Score = 30.4 bits (67), Expect = 3.0
 Identities = 13/47 (27%), Positives = 26/47 (55%)
 Frame = +3

Query: 279 LPYGENPSRTLFIRNINANVEDTELKLLFEQYGDIQTLYTAXQHHGL 419
           LP G+    T+F+  I+A +++TE+   F +YG ++ +       G+
Sbjct: 32  LPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGV 78
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>SSP2_YEAST (Q08646) Sporulation-specific protein 2|
          Length = 371

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = +3

Query: 333 NVEDTELKLLFEQYGDIQTLYTAXQHHGLVIISYYDIRSAERAMKALQASHS 488
           N++  EL+  F+ +G++  +         V I +YDI SA RAM+  +   S
Sbjct: 294 NIDIQELEKDFQNFGEVLEITPIVSRKLCVSIFFYDISSAMRAMEEYEQKGS 345
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>NUCL_XENLA (P20397) Nucleolin (Protein C23)|
          Length = 650

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 20/62 (32%), Positives = 32/62 (51%)
 Frame = +3

Query: 291 ENPSRTLFIRNINANVEDTELKLLFEQYGDIQTLYTAXQHHGLVIISYYDIRSAERAMKA 470
           E  SRTLF++NI  +    EL+ +FE   DI+      +      I+Y +  + + A KA
Sbjct: 320 ERDSRTLFVKNIPYSTTVEELQEIFENAKDIR--IPTGKDGSNKGIAYVEFSNEDEANKA 377

Query: 471 LQ 476
           L+
Sbjct: 378 LE 379
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>LARK_DROME (Q94901) RNA-binding protein lark|
          Length = 352

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +3

Query: 309 LFIRNINANVEDTELKLLFEQYGDI 383
           LFI N++   + TEL+ LFE+YG +
Sbjct: 9   LFIGNLDEKTQATELRALFEKYGTV 33
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>SLT11_EMENI (Q5AX35) Pre-mRNA-splicing factor slt11|
          Length = 385

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 18/66 (27%), Positives = 33/66 (50%)
 Frame = +3

Query: 279 LPYGENPSRTLFIRNINANVEDTELKLLFEQYGDIQTLYTAXQHHGLVIISYYDIRSAER 458
           LP  +    +LF+  +  ++ +  L+  F Q+G +++L  + + H    I+Y    SAE 
Sbjct: 229 LPPADPNITSLFVTGVEDDLPEHALRSFFVQFGQLRSLVCSHRAH-CAFINYAARESAEA 287

Query: 459 AMKALQ 476
           A K  Q
Sbjct: 288 AAKHCQ 293
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>FCA_ARATH (O04425) Flowering time control protein FCA|
          Length = 747

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
 Frame = +3

Query: 309 LFIRNINANVEDTELKLLFEQYGDIQTL-----YTAXQHHGLVIISYYDIRSAERAMKAL 473
           LF+ ++     + E++  FEQ+G++  +         Q  G   + Y   + A+RA++AL
Sbjct: 122 LFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIRAL 181
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>SIM_DROME (P05709) Protein single-minded|
          Length = 697

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 17/41 (41%), Positives = 25/41 (60%)
 Frame = -3

Query: 200 HSTSSREYVVINVIYVISTGRVTHIIKNT*Q*VVVIREEIA 78
           +S SSRE  +++V YV+S   V  ++ N  Q  VV RE I+
Sbjct: 364 NSRSSREVFIVSVNYVLSEREVKDLVLNEIQTGVVKREPIS 404
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>PABP5_ARATH (Q05196) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 668

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +3

Query: 288 GENPSRT-LFIRNINANVEDTELKLLFEQYGDIQTLYTAXQHHG 416
           G  PS T ++++N+   + D ELK  F +YGDI +        G
Sbjct: 219 GAVPSFTNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSG 262
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>PPIL4_EMENI (Q5ARI5) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)|
           (PPIase) (Rotamase)
          Length = 461

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
 Frame = +3

Query: 279 LPYGE--NPSRTLFIRNINANVEDTELKLLFEQYGDI 383
           LP+ E   P   LF+  +N   +D +L+L+F ++G I
Sbjct: 238 LPFAEVKPPENVLFVCKLNPVTQDEDLELIFSRFGKI 274
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>ELAV2_MOUSE (Q60899) ELAV-like protein 2 (Hu-antigen B) (HuB) (ELAV-like|
           neuronal protein 1) (Nervous system-specific RNA-binding
           protein Mel-N1)
          Length = 360

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
 Frame = +3

Query: 291 ENPSRTLFIRNINANVEDTELKLLFEQYGDIQTL-----YTAXQHHGLVIISYYDIRSAE 455
           E+    L +  +  N+   ELK LF   G+I++          Q  G   ++Y D + AE
Sbjct: 35  EDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 94

Query: 456 RAMKAL 473
           +A+  L
Sbjct: 95  KAINTL 100
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>RSP31_ARATH (P92964) Arginine/serine-rich splicing factor RSP31|
          Length = 264

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 15/57 (26%), Positives = 28/57 (49%)
 Frame = +3

Query: 303 RTLFIRNINANVEDTELKLLFEQYGDIQTLYTAXQHHGLVIISYYDIRSAERAMKAL 473
           R +F+ N       ++L+ LF++YG +  +       G   + + D R AE A++ L
Sbjct: 2   RPVFVGNFEYETRQSDLERLFDKYGRVDRV---DMKSGYAFVYFEDERDAEDAIRKL 55
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>MRD1_ASHGO (Q75A83) Multiple RNA-binding domain-containing protein 1|
          Length = 838

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
 Frame = +3

Query: 309 LFIRNINANVEDTELKLLFEQYGDIQTLYTA-----XQHHGLVIISYYDIRSAERA 461
           LF+RNI  +  + + K LF  YG+++ ++ A      Q  G   + + D   A  A
Sbjct: 303 LFLRNILYDATEEDFKQLFSPYGELEEVHVAVDTRTGQSKGFAYVLFKDPEHAANA 358
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>ELAV2_PONPY (Q5R9Z6) ELAV-like protein 2|
          Length = 359

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
 Frame = +3

Query: 291 ENPSRTLFIRNINANVEDTELKLLFEQYGDIQTL-----YTAXQHHGLVIISYYDIRSAE 455
           E+    L +  +  N+   ELK LF   G+I++          Q  G   ++Y D + AE
Sbjct: 35  EDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 94

Query: 456 RAMKAL 473
           +A+  L
Sbjct: 95  KAINTL 100
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>ELAV2_HUMAN (Q12926) ELAV-like protein 2 (Hu-antigen B) (HuB) (ELAV-like|
           neuronal protein 1) (Nervous system-specific RNA-binding
           protein Hel-N1)
          Length = 359

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
 Frame = +3

Query: 291 ENPSRTLFIRNINANVEDTELKLLFEQYGDIQTL-----YTAXQHHGLVIISYYDIRSAE 455
           E+    L +  +  N+   ELK LF   G+I++          Q  G   ++Y D + AE
Sbjct: 35  EDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 94

Query: 456 RAMKAL 473
           +A+  L
Sbjct: 95  KAINTL 100
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>PPIL4_ASPFU (Q4WAQ9) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)|
           (PPIase) (Rotamase)
          Length = 459

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
 Frame = +3

Query: 279 LPYGE--NPSRTLFIRNINANVEDTELKLLFEQYGDI 383
           LP+ E   P   LF+  +N   +D +L+L+F ++G I
Sbjct: 238 LPFAEVKPPENVLFVCKLNPVTQDEDLQLIFSRFGPI 274
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>ROA1_MACMU (Q28521) Heterogeneous nuclear ribonucleoprotein A1|
           (Helix-destabilizing protein) (Single-strand binding
           protein) (hnRNP core protein A1)
          Length = 319

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 16/71 (22%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
 Frame = +3

Query: 303 RTLFIRNINANVEDTELKLLFEQYGDIQTLYT-----AXQHHGLVIISYYDIRSAERAMK 467
           + +F+  I  + E+  L+  FEQYG I+ +       + +  G   +++ D  S ++ + 
Sbjct: 104 KKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHNSVDKIV- 162

Query: 468 ALQASHSGSGN 500
            +Q  H+ +G+
Sbjct: 163 -IQKYHTVNGH 172
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>RBM4_BOVIN (Q3MHX3) RNA-binding protein 4 (RNA-binding motif protein 4)|
           (RNA-binding motif protein 4a)
          Length = 362

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 21/66 (31%), Positives = 33/66 (50%)
 Frame = +3

Query: 309 LFIRNINANVEDTELKLLFEQYGDIQTLYTAXQHHGLVIISYYDIRSAERAMKALQASHS 488
           LFI N+     + E++ LFEQYG +       +++G V I   D  +AE A++ L     
Sbjct: 4   LFIGNLPREATEQEIRSLFEQYGKVLEC-DIIKNYGFVHIE--DKTAAEDAIRNLHHYKL 60

Query: 489 GSGNLN 506
              N+N
Sbjct: 61  HGVNIN 66
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>MRD1_YEAST (Q06106) Multiple RNA-binding domain-containing protein 1|
          Length = 887

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
 Frame = +3

Query: 294 NPSRTLFIRNINANVEDTELKLLFEQYGDIQTLYTA-----XQHHGLVIISYYDIRSAER 458
           N +  LF+RNI    ++ + + LF  +G+++ ++ A      Q  G   + + D ++A  
Sbjct: 342 NQTGRLFLRNILYTSKEEDFRKLFSPFGELEEVHVALDTRTGQSKGFAYVLFKDSKNAVN 401

Query: 459 A 461
           A
Sbjct: 402 A 402
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>RBM4_HUMAN (Q9BWF3) RNA-binding protein 4 (RNA-binding motif protein 4)|
           (RNA-binding motif protein 4a) (Lark homolog) (hLark)
          Length = 364

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 21/66 (31%), Positives = 33/66 (50%)
 Frame = +3

Query: 309 LFIRNINANVEDTELKLLFEQYGDIQTLYTAXQHHGLVIISYYDIRSAERAMKALQASHS 488
           LFI N+     + E++ LFEQYG +       +++G V I   D  +AE A++ L     
Sbjct: 4   LFIGNLPREATEQEIRSLFEQYGKVLEC-DIIKNYGFVHIE--DKTAAEDAIRNLHHYKL 60

Query: 489 GSGNLN 506
              N+N
Sbjct: 61  HGVNIN 66
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>YBKC_SCHPO (O94621) Hypothetical RNA-binding protein C1289.12 in chromosome II|
          Length = 352

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = +3

Query: 204 LEADENNKLLKHNGGANTGQTGLNGLPYGENPSR-TLFIRNINANVEDTELKLLFEQYGD 380
           LE     +L+  N         L+ +P  + PS   LFI NI+  V + ++K LF++Y  
Sbjct: 45  LERQSTQRLISGN------PISLDVVPEWQKPSYYMLFISNIDPEVSENDIKYLFQRYNF 98

Query: 381 I 383
           I
Sbjct: 99  I 99
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>SNX41_ASHGO (Q759T1) Sorting nexin-41|
          Length = 603

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 25/101 (24%), Positives = 34/101 (33%)
 Frame = +3

Query: 12  KELNHADDEPFELTQEIEAQVIGNLLPDDDDLLSGVLYNVGHPARANNXXXXXXXXFSTG 191
           +E +  D+ PF  T  + A  IG +   DDD LS  +       +               
Sbjct: 5   RESDEEDNNPFSGTNHLYASGIGAVPEGDDDFLSAEVDTADETVQETREQMMSRLFGECE 64

Query: 192 GGMELEADENNKLLKHNGGANTGQTGLNGLPYGENPSRTLF 314
           G  E  A          GG  +G  G  G P G +   T F
Sbjct: 65  GPRESSA----------GGWTSGSMGSIGAPDGHSDEVTEF 95
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>RBM4_MOUSE (Q8C7Q4) RNA-binding protein 4 (RNA-binding motif protein 4)|
           (RNA-binding motif protein 4a) (Lark homolog) (mLark)
          Length = 361

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 21/66 (31%), Positives = 33/66 (50%)
 Frame = +3

Query: 309 LFIRNINANVEDTELKLLFEQYGDIQTLYTAXQHHGLVIISYYDIRSAERAMKALQASHS 488
           LFI N+     + E++ LFEQYG +       +++G V I   D  +AE A++ L     
Sbjct: 4   LFIGNLPREATEQEIRSLFEQYGKVLEC-DIIKNYGFVHIE--DKTAAEDAIRNLHHYKL 60

Query: 489 GSGNLN 506
              N+N
Sbjct: 61  HGVNIN 66
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>RU17_XENTR (Q66II8) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70|
           kDa) (snRNP70) (U1-70K)
          Length = 471

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
 Frame = +3

Query: 303 RTLFIRNINANVEDTELKLLFEQYGDIQTLY-----TAXQHHGLVIISYYDIRSAERAMK 467
           +TLF+  +N +  +++L+  FE YG I+ ++      + +  G   I Y   R    A K
Sbjct: 103 KTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYNKRSGKPRGYAFIEYEHERDMHSAYK 162
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>RU17_MOUSE (Q62376) U1 small nuclear ribonucleoprotein 70 kDa (U1 SNRNP 70|
           kDa) (snRNP70)
          Length = 448

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
 Frame = +3

Query: 303 RTLFIRNINANVEDTELKLLFEQYGDIQTLY-----TAXQHHGLVIISYYDIRSAERAMK 467
           +TLF+  +N +  +++L+  FE YG I+ ++      + +  G   I Y   R    A K
Sbjct: 103 KTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYK 162
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>ROC2_ARATH (Q43349) 29 kDa ribonucleoprotein, chloroplast precursor|
           (RNA-binding protein cp29)
          Length = 342

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = +3

Query: 294 NPSRTLFIRNINANVEDTELKLLFEQYGDIQ 386
           +P   LF+ N++ NV+  +L  LFE  G+++
Sbjct: 96  SPDLKLFVGNLSFNVDSAQLAQLFESAGNVE 126
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>RBM4_RABIT (Q9BDY9) RNA-binding protein 4 (RNA-binding motif protein 4) (Lark|
           homolog)
          Length = 359

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 21/66 (31%), Positives = 33/66 (50%)
 Frame = +3

Query: 309 LFIRNINANVEDTELKLLFEQYGDIQTLYTAXQHHGLVIISYYDIRSAERAMKALQASHS 488
           LFI N+     + E++ LFEQYG +       +++G V I   D  +AE A++ L     
Sbjct: 4   LFIGNLPREATEQEIRSLFEQYGKVLEC-DIIKNYGFVHIE--DKTAAEDAIRNLHHYKL 60

Query: 489 GSGNLN 506
              N+N
Sbjct: 61  HGVNIN 66
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>RBM4B_HUMAN (Q9BQ04) RNA-binding protein 4B (RNA-binding motif protein 4B)|
           (RNA-binding protein 30) (RNA-binding motif protein 30)
          Length = 359

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 21/66 (31%), Positives = 33/66 (50%)
 Frame = +3

Query: 309 LFIRNINANVEDTELKLLFEQYGDIQTLYTAXQHHGLVIISYYDIRSAERAMKALQASHS 488
           LFI N+     + E++ LFEQYG +       +++G V I   D  +AE A++ L     
Sbjct: 4   LFIGNLPREATEQEIRSLFEQYGKVLEC-DIIKNYGFVHIE--DKTAAEDAIRNLHHYKL 60

Query: 489 GSGNLN 506
              N+N
Sbjct: 61  HGVNIN 66
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>PABP5_PONPY (P60050) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 382

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 14/56 (25%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
 Frame = +3

Query: 309 LFIRNINANVEDTELKLLFEQYGDIQTLY----TAXQHHGLVIISYYDIRSAERAM 464
           +F++NI  +++D +LK LF +YG  +++      + +  G   + Y    +A++A+
Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAV 256
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>PABP5_PANTR (P60049) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 382

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 14/56 (25%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
 Frame = +3

Query: 309 LFIRNINANVEDTELKLLFEQYGDIQTLY----TAXQHHGLVIISYYDIRSAERAM 464
           +F++NI  +++D +LK LF +YG  +++      + +  G   + Y    +A++A+
Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAV 256
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>PABP5_MACMU (Q7JGR2) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 382

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 14/56 (25%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
 Frame = +3

Query: 309 LFIRNINANVEDTELKLLFEQYGDIQTLY----TAXQHHGLVIISYYDIRSAERAM 464
           +F++NI  +++D +LK LF +YG  +++      + +  G   + Y    +A++A+
Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAV 256
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>PABP5_HYLLA (P60048) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 382

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 14/56 (25%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
 Frame = +3

Query: 309 LFIRNINANVEDTELKLLFEQYGDIQTLY----TAXQHHGLVIISYYDIRSAERAM 464
           +F++NI  +++D +LK LF +YG  +++      + +  G   + Y    +A++A+
Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAV 256
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>PABP5_HUMAN (Q96DU9) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 382

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 14/56 (25%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
 Frame = +3

Query: 309 LFIRNINANVEDTELKLLFEQYGDIQTLY----TAXQHHGLVIISYYDIRSAERAM 464
           +F++NI  +++D +LK LF +YG  +++      + +  G   + Y    +A++A+
Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAV 256
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>PABP5_GORGO (P60047) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 382

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 14/56 (25%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
 Frame = +3

Query: 309 LFIRNINANVEDTELKLLFEQYGDIQTLY----TAXQHHGLVIISYYDIRSAERAM 464
           +F++NI  +++D +LK LF +YG  +++      + +  G   + Y    +A++A+
Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAV 256
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>RBM4B_RAT (Q64LC9) RNA-binding protein 4B (RNA-binding motif protein 4B)|
           (RNA-binding protein 30) (RNA-binding motif protein 30)
           (Zinc-responsive protein ZD7)
          Length = 357

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 21/66 (31%), Positives = 33/66 (50%)
 Frame = +3

Query: 309 LFIRNINANVEDTELKLLFEQYGDIQTLYTAXQHHGLVIISYYDIRSAERAMKALQASHS 488
           LFI N+     + E++ LFEQYG +       +++G V I   D  +AE A++ L     
Sbjct: 4   LFIGNLPREATEQEIRSLFEQYGKVLEC-DIIKNYGFVHIE--DKTAAEDAIRNLHHYKL 60

Query: 489 GSGNLN 506
              N+N
Sbjct: 61  HGVNIN 66
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>RBM4B_MOUSE (Q8VE92) RNA-binding protein 4B (RNA-binding motif protein 4B)|
           (RNA-binding protein 30) (RNA-binding motif protein 30)
          Length = 357

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 21/66 (31%), Positives = 33/66 (50%)
 Frame = +3

Query: 309 LFIRNINANVEDTELKLLFEQYGDIQTLYTAXQHHGLVIISYYDIRSAERAMKALQASHS 488
           LFI N+     + E++ LFEQYG +       +++G V I   D  +AE A++ L     
Sbjct: 4   LFIGNLPREATEQEIRSLFEQYGKVLEC-DIIKNYGFVHIE--DKTAAEDAIRNLHHYKL 60

Query: 489 GSGNLN 506
              N+N
Sbjct: 61  HGVNIN 66
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>DGTL1_MYCSM (O52199) Deoxyguanosinetriphosphate triphosphohydrolase-like|
           protein
          Length = 428

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 6/76 (7%)
 Frame = +3

Query: 24  HADDEPFELTQEIEAQVIGNL----LPDDDDL--LSGVLYNVGHPARANNXXXXXXXXFS 185
           H D+    LT  +E   IG      L  D DL  L+G+ +++GHP   +N          
Sbjct: 65  HGDNPRTRLTHSLEVAQIGRGMAIGLGCDPDLVDLAGLAHDIGHPPYGHNGERALNEIAK 124

Query: 186 TGGGMELEADENNKLL 233
             GG E  A +N ++L
Sbjct: 125 AFGGFEGNA-QNFRIL 139
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>RU17_HUMAN (P08621) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70|
           kDa) (snRNP70) (U1-70K)
          Length = 437

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
 Frame = +3

Query: 303 RTLFIRNINANVEDTELKLLFEQYGDIQTLY-----TAXQHHGLVIISYYDIRSAERAMK 467
           +TLF+  +N +  +++L+  FE YG I+ ++      + +  G   I Y   R    A K
Sbjct: 103 KTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYK 162
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>RS9_THEAC (Q9HL08) 30S ribosomal protein S9P|
          Length = 129

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 21/58 (36%), Positives = 28/58 (48%)
 Frame = +3

Query: 201 ELEADENNKLLKHNGGANTGQTGLNGLPYGENPSRTLFIRNINANVEDTELKLLFEQY 374
           E +A + +  +K  GG  TGQ          + SRT   R I   + DTEL+ LF QY
Sbjct: 50  EDKAKDLDIAVKVRGGGVTGQA---------DASRTAIARAIVKYLNDTELENLFRQY 98


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,134,953
Number of Sequences: 219361
Number of extensions: 1445626
Number of successful extensions: 3662
Number of sequences better than 10.0: 101
Number of HSP's better than 10.0 without gapping: 3539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3662
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3869946934
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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