>gb|AC118288.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0077L08, complete sequence
          Length = 115640

 Score =  168 bits (85), Expect = 1e-38
 Identities = 127/141 (90%)
 Strand = Plus / Minus

                                                                         
Query: 197   cagcaggatttggagctgagagtaatgaaataagatgctcctcaaaagcaaattcaagct 256
             ||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||| |
Sbjct: 12998 cagcaggatctggagctgagattaatgaaataagatgctcctcaagagcaaattcaagtt 12939

                                                                         
Query: 257   ggccacggccgtcggcatcatcttgtcgatgctctcgctgctggtgcaccttttccttgc 316
             |||||| ||  | |||||| |  |||||||||| ||||||||||||||||||||||||||
Sbjct: 12938 ggccacagcgattggcatcgtgctgtcgatgctatcgctgctggtgcaccttttccttgc 12879

                                  
Query: 317   aaattattctgccgggggaat 337
              ||||||||||| ||||||||
Sbjct: 12878 gaattattctgctgggggaat 12858



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                     
Query: 380   gcctcggccccgtaggttgtggggtccattgcgtacacttgatcacctacaccctt 435
             |||||| ||||| || ||||||||| | ||| |||||||||||||  |||||||||
Sbjct: 12646 gcctcgaccccggagattgtggggttcgttgagtacacttgatcatttacaccctt 12591

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  168 bits (85), Expect = 1e-38
 Identities = 127/141 (90%)
 Strand = Plus / Minus

                                                                           
Query: 197     cagcaggatttggagctgagagtaatgaaataagatgctcctcaaaagcaaattcaagct 256
               ||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||| |
Sbjct: 1834224 cagcaggatctggagctgagattaatgaaataagatgctcctcaagagcaaattcaagtt 1834165

                                                                           
Query: 257     ggccacggccgtcggcatcatcttgtcgatgctctcgctgctggtgcaccttttccttgc 316
               |||||| ||  | |||||| |  |||||||||| ||||||||||||||||||||||||||
Sbjct: 1834164 ggccacagcgattggcatcgtgctgtcgatgctatcgctgctggtgcaccttttccttgc 1834105

                                    
Query: 317     aaattattctgccgggggaat 337
                ||||||||||| ||||||||
Sbjct: 1834104 gaattattctgctgggggaat 1834084



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                       
Query: 380     gcctcggccccgtaggttgtggggtccattgcgtacacttgatcacctacaccctt 435
               |||||| ||||| || ||||||||| | ||| |||||||||||||  |||||||||
Sbjct: 1833872 gcctcgaccccggagattgtggggttcgttgagtacacttgatcatttacaccctt 1833817

>dbj|AK101319.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034D15, full
           insert sequence
          Length = 2801

 Score =  159 bits (80), Expect = 9e-36
 Identities = 122/136 (89%)
 Strand = Plus / Plus

                                                                       
Query: 202 ggatttggagctgagagtaatgaaataagatgctcctcaaaagcaaattcaagctggcca 261
           |||| ||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||
Sbjct: 251 ggatctggagctgagattaatgaaataagatgctcctcaagagcaaattcaagttggcca 310

                                                                       
Query: 262 cggccgtcggcatcatcttgtcgatgctctcgctgctggtgcaccttttccttgcaaatt 321
           | ||  | |||||| |  |||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 311 cagcgattggcatcgtgctgtcgatgctatcgctgctggtgcaccttttccttgcgaatt 370

                           
Query: 322 attctgccgggggaat 337
           ||||||| ||||||||
Sbjct: 371 attctgctgggggaat 386



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 64/76 (84%)
 Strand = Plus / Plus

                                                                       
Query: 360 gtccttccatttggatcgaagcctcggccccgtaggttgtggggtccattgcgtacactt 419
           |||||||| |||||| | | |||||| ||||| || ||||||||| | ||| ||||||||
Sbjct: 415 gtccttccgtttggaccaaggcctcgaccccggagattgtggggttcgttgagtacactt 474

                           
Query: 420 gatcacctacaccctt 435
           |||||  |||||||||
Sbjct: 475 gatcatttacaccctt 490

>dbj|AK060754.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-G12, full
           insert sequence
          Length = 2282

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 55/58 (94%)
 Strand = Plus / Plus

                                                                     
Query: 280 tgtcgatgctctcgctgctggtgcaccttttccttgcaaattattctgccgggggaat 337
           |||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 30  tgtcgatgctatcgctgctggtgcaccttttccttgcgaattattctgctgggggaat 87



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 64/76 (84%)
 Strand = Plus / Plus

                                                                       
Query: 360 gtccttccatttggatcgaagcctcggccccgtaggttgtggggtccattgcgtacactt 419
           |||||||| |||||| | | |||||| ||||| || ||||||||| | ||| ||||||||
Sbjct: 116 gtccttccgtttggaccaaggcctcgaccccggagattgtggggttcgttgagtacactt 175

                           
Query: 420 gatcacctacaccctt 435
           |||||  |||||||||
Sbjct: 176 gatcatttacaccctt 191

>gb|AC166262.3| Mus musculus  BAC RP23-256D10 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 175073

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 188   gcaggcaggcagcaggatttgg 209
             ||||||||||||||||||||||
Sbjct: 50062 gcaggcaggcagcaggatttgg 50083

>gb|AC159478.7| Mus musculus 10 BAC RP23-460F17 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 174480

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 188   gcaggcaggcagcaggatttgg 209
             ||||||||||||||||||||||
Sbjct: 21441 gcaggcaggcagcaggatttgg 21420

>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 286    tgctctcgctgctggtgcacc 306
              |||||||||||||||||||||
Sbjct: 831226 tgctctcgctgctggtgcacc 831246



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 79      gcaggtcgccgcgccgagtt 98
               ||||||||||||||||||||
Sbjct: 2976861 gcaggtcgccgcgccgagtt 2976880

>emb|AL954855.8| Mouse DNA sequence from clone RP23-211L10 on chromosome X, complete
             sequence
          Length = 87910

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 236   cctcaaaagcaaattcaagct 256
             |||||||||||||||||||||
Sbjct: 44634 cctcaaaagcaaattcaagct 44614

>gb|AC159994.7| Mus musculus chromosome 7, clone RP23-368F23, complete sequence
          Length = 181238

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 310   tccttgcaaattattctgcc 329
             ||||||||||||||||||||
Sbjct: 71905 tccttgcaaattattctgcc 71886

>gb|BC062236.1| Rattus norvegicus cDNA clone MGC:72900 IMAGE:6888893, complete cds
          Length = 1704

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 345  tacaacttggaggaggtccttcca 368
            |||||| |||||||||||||||||
Sbjct: 1050 tacaacctggaggaggtccttcca 1073

>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 181     cgccgccgcaggcaggcagcagga 204
               ||||||||||||||| ||||||||
Sbjct: 2267010 cgccgccgcaggcagccagcagga 2267033

>emb|X16362.1|RNSERPG Rat SPI-2 serine protease inhibitor gene
          Length = 8005

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 345  tacaacttggaggaggtccttcca 368
            |||||| |||||||||||||||||
Sbjct: 5699 tacaacctggaggaggtccttcca 5722

>emb|X16358.1|RNSEPI2 Rat mRNA for SPI-2 serine protease inhibitor
          Length = 1668

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 345  tacaacttggaggaggtccttcca 368
            |||||| |||||||||||||||||
Sbjct: 1047 tacaacctggaggaggtccttcca 1070

>emb|X05348.1|RNSPI23 Rat hepatocyte mRNA for growth hormone-regulated protein SPI 2.3
            (GHR-P63) (growth hormone-regulated protein)
          Length = 1654

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 345  tacaacttggaggaggtccttcca 368
            |||||| |||||||||||||||||
Sbjct: 1033 tacaacctggaggaggtccttcca 1056

>emb|CR631123.6| Zebrafish DNA sequence from clone DKEY-189H14 in linkage group 19,
             complete sequence
          Length = 138519

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    cacttcactccacctctcca 74
             ||||||||||||||||||||
Sbjct: 93487 cacttcactccacctctcca 93468

>gb|AC093844.3| Homo sapiens BAC clone RP11-451F20 from 4, complete sequence
          Length = 196044

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 54     ccacttcactccacctctccactc 77
              ||||||| ||||||||||||||||
Sbjct: 137352 ccacttctctccacctctccactc 137329

>gb|AC098862.3| Homo sapiens BAC clone RP11-339D20 from 4, complete sequence
          Length = 122969

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 202   ggatttggagctgagagtaa 221
             ||||||||||||||||||||
Sbjct: 54701 ggatttggagctgagagtaa 54682

>ref|NM_012657.1| Rattus norvegicus Serine protease inhibitor (Spin2b), mRNA
          Length = 1664

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 345  tacaacttggaggaggtccttcca 368
            |||||| |||||||||||||||||
Sbjct: 1044 tacaacctggaggaggtccttcca 1067

>emb|AL929006.3| Zebrafish DNA sequence from clone CH211-198G19 in linkage group 18,
             complete sequence
          Length = 193154

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    cacttcactccacctctcca 74
             ||||||||||||||||||||
Sbjct: 77919 cacttcactccacctctcca 77900

>gb|AC003991.1|AC003991 Human BAC clone CTB-167B5 from 7q21, complete sequence
          Length = 118313

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 209  gagctgagagtaatgaaata 228
            ||||||||||||||||||||
Sbjct: 4246 gagctgagagtaatgaaata 4227

>dbj|D00751.1|RATCCP21 Rattus norvegicus mRNA for contrapsin-like protease inhibitor
            (CPi-21)
          Length = 1620

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 345  tacaacttggaggaggtccttcca 368
            |||||| |||||||||||||||||
Sbjct: 999  tacaacctggaggaggtccttcca 1022

>gb|M67496.1|RATKBP Rat kallikrein-binding protein (RKBP) gene
          Length = 9602

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 345  tacaacttggaggaggtccttcca 368
            |||||| |||||||||||||||||
Sbjct: 6476 tacaacctggaggaggtccttcca 6499

>gb|M14320.1|RATTHRA Rat thyroid hormone regulated mRNA
          Length = 1161

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 345 tacaacttggaggaggtccttcca 368
           |||||| |||||||||||||||||
Sbjct: 544 tacaacctggaggaggtccttcca 567

>gb|M15916.1|RATSPI2 Rat serine protease inhibitor 2 mRNA, clone lambda Spi-2
          Length = 1561

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 345  tacaacttggaggaggtccttcca 368
            |||||| |||||||||||||||||
Sbjct: 1011 tacaacctggaggaggtccttcca 1034


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,837,427
Number of Sequences: 3902068
Number of extensions: 2837427
Number of successful extensions: 59537
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59362
Number of HSP's gapped (non-prelim): 175
length of query: 435
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 413
effective length of database: 17,147,199,772
effective search space: 7081793505836
effective search space used: 7081793505836
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)