>LONH1_MAIZE (P93647) Lon protease homolog 1, mitochondrial precursor (EC|
           3.4.21.-)
          Length = 885

 Score =  143 bits (360), Expect = 2e-34
 Identities = 74/104 (71%), Positives = 79/104 (75%)
 Frame = +1

Query: 139 PVELPGRLAILPFRNKVLLPGAIVRIRCTTPSSVKLVEQELWQREDKGLIGVLPVRDSEA 318
           PVELP RLA+LPFRNKVLLPGAIVRIRCT PSSVKLVEQELWQ+E+KGLIGVLPVRDSEA
Sbjct: 5   PVELPSRLAVLPFRNKVLLPGAIVRIRCTNPSSVKLVEQELWQKEEKGLIGVLPVRDSEA 64

Query: 319 AAVGSILXXXXXXXXXXXXXXXXXASGGESSKQDAXSGKEPIHW 450
            AVGS+L                  S  ESSKQD  +GKEPIHW
Sbjct: 65  TAVGSLL-SPGVGSDSGEGGSKVGGSAVESSKQDTKNGKEPIHW 107

>LONH1_SPIOL (O04979) Lon protease homolog 1, mitochondrial precursor (EC|
           3.4.21.-)
          Length = 875

 Score =  112 bits (279), Expect = 6e-25
 Identities = 60/104 (57%), Positives = 71/104 (68%), Gaps = 1/104 (0%)
 Frame = +1

Query: 142 VELPGRLAILPFRNKVLLPGAIVRIRCTTPSSVKLVEQELWQREDKGLIGVLPVRD-SEA 318
           VELP RL IL FRNKVLLPGAI+RIRCT+PSSVKLVEQELWQRE+KGLIG++PVRD SE+
Sbjct: 5   VELPSRLGILAFRNKVLLPGAIIRIRCTSPSSVKLVEQELWQREEKGLIGIVPVRDASES 64

Query: 319 AAVGSILXXXXXXXXXXXXXXXXXASGGESSKQDAXSGKEPIHW 450
           A+V  +L                     +S K D  S +E +HW
Sbjct: 65  ASVAPVLYPGGGTDSGERNVKSQPGL-SDSRKADGKSQQEAVHW 107

>LONH1_ARATH (O64948) Lon protease homolog 1, mitochondrial precursor (EC|
           3.4.21.-)
          Length = 888

 Score =  104 bits (259), Expect = 1e-22
 Identities = 50/67 (74%), Positives = 62/67 (92%), Gaps = 1/67 (1%)
 Frame = +1

Query: 142 VELPGRLAILPFRNKVLLPGAIVRIRCTTPSSVKLVEQELWQREDKGLIGVLPVR-DSEA 318
           VELP RLAILPFRNKVLLPGAI+RIRCT+ SSV LVEQELWQ+E+KGLIG+LPVR D+E 
Sbjct: 5   VELPSRLAILPFRNKVLLPGAIIRIRCTSHSSVTLVEQELWQKEEKGLIGILPVRDDAEG 64

Query: 319 AAVGSIL 339
           +++G+++
Sbjct: 65  SSIGTMI 71

>LON2_MYXXA (P36774) ATP-dependent protease La 2 (EC 3.4.21.53)|
          Length = 826

 Score = 32.7 bits (73), Expect = 0.44
 Identities = 18/63 (28%), Positives = 32/63 (50%)
 Frame = +1

Query: 145 ELPGRLAILPFRNKVLLPGAIVRIRCTTPSSVKLVEQELWQREDKGLIGVLPVRDSEAAA 324
           ++P  L ILP RN V  PG ++ +      ++ L++  +    D  +IGV+  R +E   
Sbjct: 27  DIPQVLPILPLRNSVFFPGGVLPLAVGRQKTIALIKDAV---RDDQVIGVVTQRRAEEED 83

Query: 325 VGS 333
            G+
Sbjct: 84  PGA 86

>RECX_DEIRA (Q9RUS2) Regulatory protein recX|
          Length = 204

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 7/53 (13%)
 Frame = -2

Query: 418 PVCSTLPQ--KHQATGGLLPLNHRPLQ-----ATGSNQQPQPQSPAREAPQSD 281
           PVC   P   K  ++GG+LP+ +RP +     A+    +P+P+ P     Q +
Sbjct: 2   PVCGRRPWQVKRSSSGGILPVMYRPRRRSSTPASEGEAEPRPRRPKTREEQRE 54

>SMG7_HUMAN (Q92540) Protein SMG7 (SMG-7 homolog) (EST1-like protein C)|
          Length = 1137

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = -2

Query: 409 STLPQKHQATGGLLPLNHRPLQATGSNQQPQPQSPAREAPQS 284
           S +P   Q   G  P+N  P Q+   +QQP    PA+   QS
Sbjct: 714 SHIPYSQQRPSGPGPMNQGPQQSQPPSQQPLTSLPAQPTAQS 755

>PCLO_RAT (Q9JKS6) Protein piccolo (Aczonin) (Multidomain presynaptic|
           cytomatrix protein)
          Length = 5085

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -2

Query: 367 PLNHRPLQATGSNQQPQPQSPAREAPQ 287
           P   +P Q T +  QPQP +PA+  PQ
Sbjct: 432 PAKPQPQQPTPAKPQPQPPTPAKPQPQ 458

>GDBX_WHEAT (P21292) Gamma-gliadin precursor|
          Length = 302

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = -2

Query: 406 TLPQKHQATGGLLPLNHRPLQATGSNQQPQPQSPAREAPQS 284
           T+PQ HQ        +H+P Q     QQ  P  P ++ PQ+
Sbjct: 51  TIPQPHQT------FHHQPQQTFPQPQQTYPHQPQQQFPQT 85

>SSBW_PSEPU (Q8VMM4) Single-stranded DNA-binding protein (SSB)|
           (Helix-destabilizing protein)
          Length = 180

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = -2

Query: 400 PQKHQATGGLLPLNHRPLQATGSNQQPQPQSPAREAPQ 287
           PQ  Q  G        P    GSNQQP+ Q+P ++ PQ
Sbjct: 115 PQNQQQGGD-------PYNQGGSNQQPRQQAPRQQRPQ 145

>VG1_BPIKE (P03658) Gene I protein|
          Length = 365

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 318 CGCWFDPVAWSGR*FRGRRPPVAWCFWGR 404
           CG WF+   WS    + R+P + WC   R
Sbjct: 90  CGTWFNSRNWSD---KSRQPVIDWCLHAR 115

>AMEL_MONDO (Q28462) Amelogenin|
          Length = 202

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = -2

Query: 421 HPVCSTLPQKHQATGGLLPLNHRPLQATGSNQQPQPQSPAREAP 290
           H +   L Q+H  +  L P +H P+ A  + Q   PQ P    P
Sbjct: 48  HQIIPVLSQQHSPSHSLPPQHHIPIMA--AQQPAPPQQPVMPVP 89


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,206,786
Number of Sequences: 219361
Number of extensions: 911189
Number of successful extensions: 2780
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2772
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2793557952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)