ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl03h01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY494984.1| Triticum aestivum LON1 protease mRNA, complete cds 513 e-142
2gb|AF542966.1| Triticum aestivum lon protease-like mRNA, partial... 509 e-141
3gb|AF385580.2| Dichanthelium lanuginosum Lon protease (lon) mRNA... 301 1e-78
4gb|DQ002905.1| Oryza sativa (indica cultivar-group) lon protease... 250 3e-63
5gb|AY129070.1| Oryza sativa (indica cultivar-group) Lon protease... 250 3e-63
6gb|AY109454.1| Zea mays CL1713_1 mRNA sequence 210 3e-51
7gb|U85494.1|ZMU85494 Zea mays LON1 protease (LON1) mRNA, complet... 210 3e-51
8dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 178 1e-41
9dbj|AP005092.3| Oryza sativa (japonica cultivar-group) genomic D... 178 1e-41
10dbj|AP005314.2| Oryza sativa (japonica cultivar-group) genomic D... 178 1e-41
11gb|AY664413.1| Zea mays cultivar B73 locus 9002, complete sequence 46 0.099
12gb|AC139621.4| Artibeus jamaicensis clone 47H5, complete sequence 44 0.39
13gb|DP000001.1| Artibeus jamaicensis target 1 genomic scaffold 44 0.39
14gb|AC007889.9| Drosophila melanogaster clone BACR48E12, complete... 42 1.5
15gb|AC007692.5| Drosophila melanogaster clone BACR06O05, complete... 42 1.5
16gb|BT025228.1| Drosophila melanogaster FI01013 full insert cDNA 42 1.5
17ref|NM_141889.2| Drosophila melanogaster Spt3 CG3169-RA (Spt3), ... 42 1.5
18gb|AY142215.1| Drosophila melanogaster suppressor of Ty 3 mRNA, ... 42 1.5
19gb|BT024200.1| Drosophila melanogaster RE50415 full insert cDNA 42 1.5
20gb|AE003694.4| Drosophila melanogaster chromosome 3R, section 32... 42 1.5
21dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 42 1.5
22gb|AY676875.1| Pseudomonas putida strain 3SK lipolytic autotrans... 40 6.1
23ref|XM_479695.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.1
24gb|AY430948.1| Uncultured prokaryote clone 828-2 AclB (aclB) gen... 40 6.1
25gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complet... 40 6.1
26gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 6.1
27gb|AY321492.1| Pseudomonas putida copABCD operon, complete sequence 40 6.1
28gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 6.1
29dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
30gb|AE004924.1| Pseudomonas aeruginosa PAO1, section 485 of 529 o... 40 6.1
31dbj|AP004462.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
32dbj|AP003909.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
33emb|AJ277638.1|PAE277638 Pseudomonas aeruginosa papA gene 40 6.1
34gb|AF005091.1|AF005091 Pseudomonas aeruginosa lipase/esterase (e... 40 6.1
35emb|AL845261.17| Mouse DNA sequence from clone RP23-174C9 on chr... 40 6.1
36gb|AC127522.7| Homo sapiens chromosome 15, clone RP13-126C7, com... 40 6.1
37emb|AL845162.9| Mouse DNA sequence from clone RP23-35I8 on chrom... 40 6.1 
>gb|AY494984.1| Triticum aestivum LON1 protease mRNA, complete cds
          Length = 3143

 Score =  513 bits (259), Expect = e-142
 Identities = 315/334 (94%)
 Strand = Plus / Plus

                                                                       
Query: 119 cggcggccatggcggacgcgccggtggagctgccgggacggctcgccatactgccgttcc 178
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 48  cggcggccatggcggacgcgccggtggagctgccgggccggctcgccatactgccgttcc 107

                                                                       
Query: 179 gcaacaaggtgctcctcccgggcgccatcgtgcggatccgatgcaccacccccagcagtg 238
           |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||
Sbjct: 108 gcaacaaggtgctcctcccgggcgccatcgtgcggatccgatgcacctaccccagcagtg 167

                                                                       
Query: 239 tcaagctggtggagcaggagctctggcagagggaggacaagggtctgattggggtgcttc 298
           | ||||||||||||||||||||||||||||||||||||| ||||||||| || |||||||
Sbjct: 168 taaagctggtggagcaggagctctggcagagggaggacaggggtctgatcggagtgcttc 227

                                                                       
Query: 299 ccgtgcgggactctgaggctgcggctgttggttcgatcctgtcgcctggagtgggcggtg 358
           | ||||||||||| |||||||||||||||||||| |||||||||||||| |||||| |||
Sbjct: 228 cggtgcgggactccgaggctgcggctgttggttccatcctgtcgcctggcgtgggcagtg 287

                                                                       
Query: 359 attcaggggaaggaggccgccggtcgcctggtgcttctgggggagagtcgagcaaacagg 418
           ||||||| || ||||||||| |||||||||||| ||||||||||||||||| ||||||||
Sbjct: 288 attcaggtgacggaggccgcaggtcgcctggtggttctgggggagagtcgaccaaacagg 347

                                             
Query: 419 atgcanagagcgggaaggagcccattcactggca 452
           ||||| |||| |||||||||||||||||||||||
Sbjct: 348 atgcaaagagtgggaaggagcccattcactggca 381
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>gb|AF542966.1| Triticum aestivum lon protease-like mRNA, partial sequence
          Length = 742

 Score =  509 bits (257), Expect = e-141
 Identities = 313/332 (94%)
 Strand = Plus / Plus

                                                                       
Query: 121 gcggccatggcggacgcgccggtggagctgccgggacggctcgccatactgccgttccgc 180
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 58  gcggccatggcggacgcgccggtggagctgccgggccggctcgccatactgccgttccgc 117

                                                                       
Query: 181 aacaaggtgctcctcccgggcgccatcgtgcggatccgatgcaccacccccagcagtgtc 240
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 118 aacaaggtgctcctcccgggcgccatcgtgcggatccgatgcaccaaccccagcagtgtc 177

                                                                       
Query: 241 aagctggtggagcaggagctctggcagagggaggacaagggtctgattggggtgcttccc 300
           |||||||||||||||||||||||||| |||||||||||||||||||| || || ||||| 
Sbjct: 178 aagctggtggagcaggagctctggcaaagggaggacaagggtctgatcggagttcttcct 237

                                                                       
Query: 301 gtgcgggactctgaggctgcggctgttggttcgatcctgtcgcctggagtgggcggtgat 360
           ||||||||||| |||||||| |||||||||||||||||||||||||| |||||| |||||
Sbjct: 238 gtgcgggactcggaggctgcagctgttggttcgatcctgtcgcctggcgtgggcagtgat 297

                                                                       
Query: 361 tcaggggaaggaggccgccggtcgcctggtgcttctgggggagagtcgagcaaacaggat 420
           ||||| |||||||||||| |||||||||||| ||||||||||||||| | ||||||||||
Sbjct: 298 tcaggtgaaggaggccgcaggtcgcctggtggttctgggggagagtcaaccaaacaggat 357

                                           
Query: 421 gcanagagcgggaaggagcccattcactggca 452
           ||| ||||  ||||||||||||||||||||||
Sbjct: 358 gcaaagagttggaaggagcccattcactggca 389
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>gb|AF385580.2| Dichanthelium lanuginosum Lon protease (lon) mRNA, complete cds
          Length = 3207

 Score =  301 bits (152), Expect = 1e-78
 Identities = 227/252 (90%)
 Strand = Plus / Plus

                                                                       
Query: 124 gccatggcggacgcgccggtggagctgccgggacggctcgccatactgccgttccgcaac 183
           |||||||||||| |||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 20  gccatggcggactcgcctgtggagctgccgggccggctcgccatactgccgttccgcaac 79

                                                                       
Query: 184 aaggtgctcctcccgggcgccatcgtgcggatccgatgcaccacccccagcagtgtcaag 243
           ||||||||||| |||||||||||||| |||||||| ||||||| |||||||||||| |||
Sbjct: 80  aaggtgctcctgccgggcgccatcgtacggatccgctgcaccaaccccagcagtgtgaag 139

                                                                       
Query: 244 ctggtggagcaggagctctggcagagggaggacaagggtctgattggggtgcttcccgtg 303
           ||||||||||| ||||||||||||| |||||| ||||| ||||||||||| ||||| |||
Sbjct: 140 ctggtggagcaagagctctggcagaaggaggagaagggcctgattggggtacttcctgtg 199

                                                                       
Query: 304 cgggactctgaggctgcggctgttggttcgatcctgtcgcctggagtgggcggtgattca 363
           |||||||| |||||||| |||||||||||  | ||||| ||||| |||||| ||||||| 
Sbjct: 200 cgggactcagaggctgcagctgttggttcattgctgtctcctggtgtgggcagtgattcc 259

                       
Query: 364 ggggaaggaggc 375
           || || ||||||
Sbjct: 260 ggtgagggaggc 271



 Score = 46.1 bits (23), Expect = 0.099
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 430 gggaaggagcccattcactggca 452
           |||||||||||||||||||||||
Sbjct: 320 gggaaggagcccattcactggca 342
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>gb|DQ002905.1| Oryza sativa (indica cultivar-group) lon protease lon1a (lon1)
           mRNA, complete sequence, alternatively spliced
          Length = 2986

 Score =  250 bits (126), Expect = 3e-63
 Identities = 162/174 (93%)
 Strand = Plus / Plus

                                                                       
Query: 123 ggccatggcggacgcgccggtggagctgccgggacggctcgccatactgccgttccgcaa 182
           |||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 110 ggccatggcggacgcggcggtggagctgcctggacggctcgcgatactgccgttccgcaa 169

                                                                       
Query: 183 caaggtgctcctcccgggcgccatcgtgcggatccgatgcaccacccccagcagtgtcaa 242
           |||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||| ||
Sbjct: 170 caaggtgctcctcccgggggccatcgtgcggatccgctgcaccaaccccagcagtgtgaa 229

                                                                 
Query: 243 gctggtggagcaggagctctggcagagggaggacaagggtctgattggggtgct 296
           ||| ||||||||||||||||||||  ||||||| ||||||||||| ||||||||
Sbjct: 230 gcttgtggagcaggagctctggcaacgggaggagaagggtctgatcggggtgct 283
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>gb|AY129070.1| Oryza sativa (indica cultivar-group) Lon protease (Lon1) mRNA,
           complete cds
          Length = 2908

 Score =  250 bits (126), Expect = 3e-63
 Identities = 162/174 (93%)
 Strand = Plus / Plus

                                                                       
Query: 123 ggccatggcggacgcgccggtggagctgccgggacggctcgccatactgccgttccgcaa 182
           |||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 110 ggccatggcggacgcggcggtggagctgcctggacggctcgcgatactgccgttccgcaa 169

                                                                       
Query: 183 caaggtgctcctcccgggcgccatcgtgcggatccgatgcaccacccccagcagtgtcaa 242
           |||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||| ||
Sbjct: 170 caaggtgctcctcccgggggccatcgtgcggatccgctgcaccaaccccagcagtgtgaa 229

                                                                 
Query: 243 gctggtggagcaggagctctggcagagggaggacaagggtctgattggggtgct 296
           ||| ||||||||||||||||||||  ||||||| ||||||||||| ||||||||
Sbjct: 230 gcttgtggagcaggagctctggcaacgggaggagaagggtctgatcggggtgct 283
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>gb|AY109454.1| Zea mays CL1713_1 mRNA sequence
          Length = 3184

 Score =  210 bits (106), Expect = 3e-51
 Identities = 214/250 (85%)
 Strand = Plus / Plus

                                                                       
Query: 126 catggcggacgcgccggtggagctgccgggacggctcgccatactgccgttccgcaacaa 185
           |||| ||||| ||||||||||||||||| | ||||||||| ||||||| |||||||||||
Sbjct: 123 catgtcggactcgccggtggagctgccgagccggctcgccgtactgcccttccgcaacaa 182

                                                                       
Query: 186 ggtgctcctcccgggcgccatcgtgcggatccgatgcaccacccccagcagtgtcaagct 245
           |||||| ||||| || |||||||||||||| || ||||||| |||||| ||||| |||||
Sbjct: 183 ggtgctgctccccggtgccatcgtgcggattcgctgcaccaaccccagtagtgtgaagct 242

                                                                       
Query: 246 ggtggagcaggagctctggcagagggaggacaagggtctgattggggtgcttcccgtgcg 305
           ||||||||| || |||||||||| ||| || || || ||||| ||||| ||||| |||||
Sbjct: 243 ggtggagcaagaactctggcagaaggaagagaaaggcctgatcggggtacttcctgtgcg 302

                                                                       
Query: 306 ggactctgaggctgcggctgttggttcgatcctgtcgcctggagtgggcggtgattcagg 365
           |||||| |||||  | |||||||| ||  | ||||| ||||| |||||| ||||||||||
Sbjct: 303 ggactcggaggcaacagctgttggctctttgctgtctcctggtgtgggcagtgattcagg 362

                     
Query: 366 ggaaggaggc 375
            |||||||||
Sbjct: 363 tgaaggaggc 372



 Score = 46.1 bits (23), Expect = 0.099
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 430 gggaaggagcccattcactggca 452
           |||||||||||||||||||||||
Sbjct: 424 gggaaggagcccattcactggca 446
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>gb|U85494.1|ZMU85494 Zea mays LON1 protease (LON1) mRNA, complete cds
          Length = 3217

 Score =  210 bits (106), Expect = 3e-51
 Identities = 214/250 (85%)
 Strand = Plus / Plus

                                                                       
Query: 126 catggcggacgcgccggtggagctgccgggacggctcgccatactgccgttccgcaacaa 185
           |||| ||||| ||||||||||||||||| | ||||||||| ||||||| |||||||||||
Sbjct: 123 catgtcggactcgccggtggagctgccgagccggctcgccgtactgcccttccgcaacaa 182

                                                                       
Query: 186 ggtgctcctcccgggcgccatcgtgcggatccgatgcaccacccccagcagtgtcaagct 245
           |||||| ||||| || |||||||||||||| || ||||||| |||||| ||||| |||||
Sbjct: 183 ggtgctgctccccggtgccatcgtgcggattcgctgcaccaaccccagtagtgtgaagct 242

                                                                       
Query: 246 ggtggagcaggagctctggcagagggaggacaagggtctgattggggtgcttcccgtgcg 305
           ||||||||| || |||||||||| ||| || || || ||||| ||||| ||||| |||||
Sbjct: 243 ggtggagcaagaactctggcagaaggaagagaaaggcctgatcggggtacttcctgtgcg 302

                                                                       
Query: 306 ggactctgaggctgcggctgttggttcgatcctgtcgcctggagtgggcggtgattcagg 365
           |||||| |||||  | |||||||| ||  | ||||| ||||| |||||| ||||||||||
Sbjct: 303 ggactcggaggcaacagctgttggctctttgctgtctcctggtgtgggcagtgattcagg 362

                     
Query: 366 ggaaggaggc 375
            |||||||||
Sbjct: 363 tgaaggaggc 372



 Score = 46.1 bits (23), Expect = 0.099
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 430 gggaaggagcccattcactggca 452
           |||||||||||||||||||||||
Sbjct: 424 gggaaggagcccattcactggca 446
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                            
Query: 123      ggccatggcggacgcgccggtggagctgccgggacggctcgccatactgccgttccgcaa 182
                |||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 20651375 ggccatggcggacgcggcggtggagctgcctggacggctcgcgatactgccgttccgcaa 20651316

                                                                      
Query: 183      caaggtgctcctcccgggcgccatcgtgcggatccgatgcaccacccccagcag 236
                |||||||||||||||||| ||||||||||||||||| ||||||| |||||||||
Sbjct: 20651315 caaggtgctcctcccgggggccatcgtgcggatccgctgcaccaaccccagcag 20651262



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                            
Query: 233      gcagtgtcaagctggtggagcaggagctctggcagagggaggacaagggtctgattgggg 292
                ||||||| ||||| ||||||||||| ||||||||  ||||||| ||||||||||| ||||
Sbjct: 20650558 gcagtgtgaagcttgtggagcaggaactctggcaacgggaggagaagggtctgatcgggg 20650499

                    
Query: 293      tgct 296
                ||||
Sbjct: 20650498 tgct 20650495
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>dbj|AP005092.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1112_E07
          Length = 132055

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                         
Query: 123   ggccatggcggacgcgccggtggagctgccgggacggctcgccatactgccgttccgcaa 182
             |||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 44986 ggccatggcggacgcggcggtggagctgcctggacggctcgcgatactgccgttccgcaa 44927

                                                                   
Query: 183   caaggtgctcctcccgggcgccatcgtgcggatccgatgcaccacccccagcag 236
             |||||||||||||||||| ||||||||||||||||| ||||||| |||||||||
Sbjct: 44926 caaggtgctcctcccgggggccatcgtgcggatccgctgcaccaaccccagcag 44873



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                         
Query: 233   gcagtgtcaagctggtggagcaggagctctggcagagggaggacaagggtctgattgggg 292
             ||||||| ||||| ||||||||||| ||||||||  ||||||| ||||||||||| ||||
Sbjct: 44169 gcagtgtgaagcttgtggagcaggaactctggcaacgggaggagaagggtctgatcgggg 44110

                 
Query: 293   tgct 296
             ||||
Sbjct: 44109 tgct 44106
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>dbj|AP005314.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0515E01
          Length = 140063

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                          
Query: 123    ggccatggcggacgcgccggtggagctgccgggacggctcgccatactgccgttccgcaa 182
              |||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 117033 ggccatggcggacgcggcggtggagctgcctggacggctcgcgatactgccgttccgcaa 116974

                                                                    
Query: 183    caaggtgctcctcccgggcgccatcgtgcggatccgatgcaccacccccagcag 236
              |||||||||||||||||| ||||||||||||||||| ||||||| |||||||||
Sbjct: 116973 caaggtgctcctcccgggggccatcgtgcggatccgctgcaccaaccccagcag 116920



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                          
Query: 233    gcagtgtcaagctggtggagcaggagctctggcagagggaggacaagggtctgattgggg 292
              ||||||| ||||| ||||||||||| ||||||||  ||||||| ||||||||||| ||||
Sbjct: 116216 gcagtgtgaagcttgtggagcaggaactctggcaacgggaggagaagggtctgatcgggg 116157

                  
Query: 293    tgct 296
              ||||
Sbjct: 116156 tgct 116153
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>gb|AY664413.1| Zea mays cultivar B73 locus 9002, complete sequence
          Length = 317137

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 430    gggaaggagcccattcactggca 452
              |||||||||||||||||||||||
Sbjct: 256243 gggaaggagcccattcactggca 256265
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>gb|AC139621.4| Artibeus jamaicensis clone 47H5, complete sequence
          Length = 103728

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 256   gagctctggcagagggaggaca 277
             ||||||||||||||||||||||
Sbjct: 36338 gagctctggcagagggaggaca 36317
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>gb|DP000001.1| Artibeus jamaicensis target 1 genomic scaffold
          Length = 584809

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 256    gagctctggcagagggaggaca 277
              ||||||||||||||||||||||
Sbjct: 207169 gagctctggcagagggaggaca 207148
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>gb|AC007889.9| Drosophila melanogaster clone BACR48E12, complete sequence
          Length = 182182

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 235    agtgtcaagctggtggagcag 255
              |||||||||||||||||||||
Sbjct: 113343 agtgtcaagctggtggagcag 113363
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>gb|AC007692.5| Drosophila melanogaster clone BACR06O05, complete sequence
          Length = 184662

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 235   agtgtcaagctggtggagcag 255
             |||||||||||||||||||||
Sbjct: 30806 agtgtcaagctggtggagcag 30826
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>gb|BT025228.1| Drosophila melanogaster FI01013 full insert cDNA
          Length = 1425

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 235 agtgtcaagctggtggagcag 255
           |||||||||||||||||||||
Sbjct: 435 agtgtcaagctggtggagcag 455
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>ref|NM_141889.2| Drosophila melanogaster Spt3 CG3169-RA (Spt3), mRNA
          Length = 1223

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 235 agtgtcaagctggtggagcag 255
           |||||||||||||||||||||
Sbjct: 435 agtgtcaagctggtggagcag 455
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>gb|AY142215.1| Drosophila melanogaster suppressor of Ty 3 mRNA, complete cds
          Length = 1281

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 235 agtgtcaagctggtggagcag 255
           |||||||||||||||||||||
Sbjct: 493 agtgtcaagctggtggagcag 513
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>gb|BT024200.1| Drosophila melanogaster RE50415 full insert cDNA
          Length = 1407

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 235 agtgtcaagctggtggagcag 255
           |||||||||||||||||||||
Sbjct: 435 agtgtcaagctggtggagcag 455
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>gb|AE003694.4| Drosophila melanogaster chromosome 3R, section 32 of 118 of the
             complete sequence
          Length = 226075

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 235   agtgtcaagctggtggagcag 255
             |||||||||||||||||||||
Sbjct: 39767 agtgtcaagctggtggagcag 39787
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 131     cggacgcgccggtggagctgccggg 155
               |||||||||||| ||||||||||||
Sbjct: 2183694 cggacgcgccggcggagctgccggg 2183718
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>gb|AY676875.1| Pseudomonas putida strain 3SK lipolytic autotransporter enzyme
           (EstA) gene, complete cds
          Length = 1941

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 372 aggccgccggtcgcctggtg 391
           ||||||||||||||||||||
Sbjct: 557 aggccgccggtcgcctggtg 576
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>ref|XM_479695.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1587

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 119 cggcggccatggcggacgcgccggtgga 146
           ||||||| ||||||| ||||||||||||
Sbjct: 569 cggcggcgatggcgggcgcgccggtgga 596
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>gb|AY430948.1| Uncultured prokaryote clone 828-2 AclB (aclB) gene, partial cds
          Length = 333

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 216 ccgatgcaccacccccagca 235
           ||||||||||||||||||||
Sbjct: 303 ccgatgcaccacccccagca 322
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>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence
          Length = 2580084

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 116    cgtcggcggccatggcggacgcgc 139
              |||||||||||||||||| |||||
Sbjct: 691116 cgtcggcggccatggcggccgcgc 691093
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 107     acagcagtgcgtcggcggcc 126
               ||||||||||||||||||||
Sbjct: 3158426 acagcagtgcgtcggcggcc 3158407
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>gb|AY321492.1| Pseudomonas putida copABCD operon, complete sequence
          Length = 3865

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 115  gcgtcggcggccatggcgga 134
            ||||||||||||||||||||
Sbjct: 1771 gcgtcggcggccatggcgga 1752
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 148     ctgccgggacggctcgccat 167
               ||||||||||||||||||||
Sbjct: 2236237 ctgccgggacggctcgccat 2236256
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
              complete sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 119    cggcggccatggcggacgcgccggtgga 146
              ||||||| ||||||| ||||||||||||
Sbjct: 302417 cggcggcgatggcgggcgcgccggtgga 302444
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>gb|AE004924.1| Pseudomonas aeruginosa PAO1, section 485 of 529 of the complete
            genome
          Length = 11101

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 372  aggccgccggtcgcctggtg 391
            ||||||||||||||||||||
Sbjct: 2169 aggccgccggtcgcctggtg 2150
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>dbj|AP004462.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0450B04
          Length = 153268

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 119   cggcggccatggcggacgcgccggtgga 146
             ||||||| ||||||| ||||||||||||
Sbjct: 11931 cggcggcgatggcgggcgcgccggtgga 11958
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>dbj|AP003909.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1300_E01
          Length = 103022

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 119   cggcggccatggcggacgcgccggtgga 146
             ||||||| ||||||| ||||||||||||
Sbjct: 68843 cggcggcgatggcgggcgcgccggtgga 68870
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>emb|AJ277638.1|PAE277638 Pseudomonas aeruginosa papA gene
          Length = 1992

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 372 aggccgccggtcgcctggtg 391
           ||||||||||||||||||||
Sbjct: 608 aggccgccggtcgcctggtg 627
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>gb|AF005091.1|AF005091 Pseudomonas aeruginosa lipase/esterase (estA) gene, complete cds
          Length = 2004

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 372 aggccgccggtcgcctggtg 391
           ||||||||||||||||||||
Sbjct: 577 aggccgccggtcgcctggtg 596
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>emb|AL845261.17| Mouse DNA sequence from clone RP23-174C9 on chromosome 2, complete
             sequence
          Length = 182370

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 25    tcccacctctctcaattcct 44
             ||||||||||||||||||||
Sbjct: 52113 tcccacctctctcaattcct 52132
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>gb|AC127522.7| Homo sapiens chromosome 15, clone RP13-126C7, complete sequence
          Length = 166914

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 259    ctctggcagagggaggacaa 278
              ||||||||||||||||||||
Sbjct: 155406 ctctggcagagggaggacaa 155425
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>emb|AL845162.9| Mouse DNA sequence from clone RP23-35I8 on chromosome 2, complete
             sequence
          Length = 189829

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 21    cgtctcccacctctctcaattcct 44
             |||||||||||||||||| |||||
Sbjct: 77865 cgtctcccacctctctcatttcct 77842


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,393,853
Number of Sequences: 3902068
Number of extensions: 3393853
Number of successful extensions: 67200
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 66866
Number of HSP's gapped (non-prelim): 334
length of query: 452
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 430
effective length of database: 17,147,199,772
effective search space: 7373295901960
effective search space used: 7373295901960
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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