ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl03g11 |
|---|---|
| Clone Library Name | barley_pub |
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 192 bits (489), Expect = 3e-49 Identities = 94/131 (71%), Positives = 113/131 (86%) Frame = +2 Query: 74 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNV 253 +GGI+ LTG + A LKGS+VLMRKNALD NDFGATV+DG++E LGRGVTCQL+SS+ V Sbjct: 2 LGGIIGGLTGN-KNARLKGSLVLMRKNALDINDFGATVIDGISEFLGRGVTCQLVSSSLV 60 Query: 254 AHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKNNHAS 433 NNG RG+VG EA+LEQWL T+LP +TTGE+KF VTF+W V+K+G+PGAIIVKNNHA+ Sbjct: 61 DPNNGNRGRVGTEASLEQWL--TSLPSLTTGESKFGVTFEWEVEKMGIPGAIIVKNNHAA 118 Query: 434 EFFLKTITLDN 466 EFFLKTITLDN Sbjct: 119 EFFLKTITLDN 129
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 191 bits (484), Expect = 1e-48 Identities = 93/131 (70%), Positives = 112/131 (85%) Frame = +2 Query: 74 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNV 253 +GGI+ +TG + + LKG+VVLMRKN LD NDFGATV+DG+ E LG+GVTCQLISST V Sbjct: 2 LGGIIDTITGSSKQSRLKGTVVLMRKNVLDLNDFGATVIDGLGEFLGKGVTCQLISSTAV 61 Query: 254 AHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKNNHAS 433 NNG RGKVGAEA+LEQW L ++LP +TTGE++F VTFDW VDKLGVPGAIIVKN+H++ Sbjct: 62 DPNNGNRGKVGAEASLEQW-LTSSLPSLTTGESRFGVTFDWDVDKLGVPGAIIVKNHHSN 120 Query: 434 EFFLKTITLDN 466 EFFLKTITLD+ Sbjct: 121 EFFLKTITLDD 131
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 185 bits (469), Expect = 6e-47 Identities = 89/129 (68%), Positives = 107/129 (82%) Frame = +2 Query: 74 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNV 253 +GG++ LTG + A LKG+VVLMRKN LD NDFGAT++DG+ E LG+GVTCQLISST V Sbjct: 3 LGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISSTAV 62 Query: 254 AHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKNNHAS 433 +NGGRGKVGAEA LEQW+ T+LP +TTGE+KF +TFDW V+KLGVPGAI+V N H+S Sbjct: 63 DQDNGGRGKVGAEAELEQWV--TSLPSLTTGESKFGLTFDWEVEKLGVPGAIVVNNYHSS 120 Query: 434 EFFLKTITL 460 EF LKTITL Sbjct: 121 EFLLKTITL 129
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 134 bits (336), Expect = 2e-31 Identities = 69/129 (53%), Positives = 92/129 (71%) Frame = +2 Query: 74 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNV 253 +GG+ LTG G +KG VLM + LD DF A+++D V E+ G +TCQL+S+T Sbjct: 2 LGGLKDKLTGK-NGNKIKGLAVLMSRKLLDPRDFTASLLDNVHEVFGNSITCQLVSATVA 60 Query: 254 AHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKNNHAS 433 NN GRG VG+EANLEQ L T+LP ++ GE+K V F+W +DK GVPGAII+KN+H++ Sbjct: 61 DQNNEGRGIVGSEANLEQGL--TDLPSVSQGESKLTVRFNWEMDKHGVPGAIIIKNHHST 118 Query: 434 EFFLKTITL 460 +FFLKTITL Sbjct: 119 KFFLKTITL 127
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 122 bits (305), Expect = 6e-28 Identities = 64/131 (48%), Positives = 92/131 (70%) Frame = +2 Query: 74 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNV 253 +GGIV + G +KG V+LM+KN LDF + GA+V+DG+++LLG+ V+ QLIS + Sbjct: 3 LGGIVDAILGKDDRPKVKGRVILMKKNVLDFINIGASVVDGISDLLGQKVSIQLISGS-- 60 Query: 254 AHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKNNHAS 433 + +G GK+ A LE WL T++ IT GE+ F+VTFDW D+ GVPGA I+KN H + Sbjct: 61 VNYDGLEGKLSNPAYLESWL--TDITPITAGESTFSVTFDWDRDEFGVPGAFIIKNLHLN 118 Query: 434 EFFLKTITLDN 466 EFFLK++TL++ Sbjct: 119 EFFLKSLTLED 129
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 114 bits (285), Expect = 1e-25 Identities = 59/127 (46%), Positives = 84/127 (66%), Gaps = 3/127 (2%) Frame = +2 Query: 95 LTGG---LRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNVAHNN 265 LTGG +KG+VVLM+KN LDFNDF A+ +D + E LG +T +L+SS N Sbjct: 9 LTGGGNETTTKKVKGTVVLMKKNVLDFNDFNASFLDRLHEFLGNKITLRLVSSDVTDSEN 68 Query: 266 GGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKNNHASEFFL 445 G +GK+G A+LE W+ T + +T GE+ F VTFD+ D G PGA +++N+H SEF L Sbjct: 69 GSKGKLGKAAHLEDWI--TTITSLTAGESAFKVTFDYETD-FGYPGAFLIRNSHFSEFLL 125 Query: 446 KTITLDN 466 K++TL++ Sbjct: 126 KSLTLED 132
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 109 bits (272), Expect = 4e-24 Identities = 61/133 (45%), Positives = 85/133 (63%), Gaps = 5/133 (3%) Frame = +2 Query: 83 IVSDLTGGLRGAH-----LKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISST 247 ++ L GGL G H +KG+VV+M+KNALDF D ++ D + E LG+ V+ QLISS Sbjct: 1 MLGQLVGGLIGGHHDSKKVKGTVVMMKKNALDFTDLAGSLTDKIFEALGQKVSFQLISSV 60 Query: 248 NVAHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKNNH 427 NG +GK A LE +LL L + GE F VTFDW+ ++ GVPGA ++KN H Sbjct: 61 QSDPANGLQGKHSNPAYLENFLL--TLTPLAAGETAFGVTFDWN-EEFGVPGAFVIKNMH 117 Query: 428 ASEFFLKTITLDN 466 +EFFLK++TL++ Sbjct: 118 INEFFLKSLTLED 130
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 100 bits (250), Expect = 1e-21 Identities = 57/133 (42%), Positives = 80/133 (60%), Gaps = 5/133 (3%) Frame = +2 Query: 83 IVSDLTGGLRGAH-----LKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISST 247 ++ +T GL G H +KG+VV+M KN LDF D ++ + ++LG+ V+ QLISS Sbjct: 1 MIGQITSGLFGGHDDSKKVKGTVVMMNKNVLDFTDLAGSLTGKIFDVLGQKVSFQLISSV 60 Query: 248 NVAHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKNNH 427 NG +GK A LE L T P E F VTFDW+ ++ GVPGA I+KN H Sbjct: 61 QGDPTNGLQGKHSNPAYLENSLF-TLTPLTAGSETAFGVTFDWN-EEFGVPGAFIIKNMH 118 Query: 428 ASEFFLKTITLDN 466 +EFFLK++TL++ Sbjct: 119 INEFFLKSLTLED 131
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 99.4 bits (246), Expect = 4e-21 Identities = 57/136 (41%), Positives = 85/136 (62%), Gaps = 6/136 (4%) Frame = +2 Query: 74 VGGIVSDLTGGLRGA----HLKGSVVLMRKNALDFNDFGATVMDGVTELLGR--GVTCQL 235 V G LTG + A ++G+ VL++K+ L DF A+++DGV +LG GV +L Sbjct: 3 VQGFFDRLTGRNKEAWKEGRIRGTAVLVKKDVLGLGDFHASLLDGVHNILGHKEGVAFRL 62 Query: 236 ISSTNVAHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIV 415 +S+T +NGGRGK+G A+LE+ L + GE+ F V F+W + G+PGA++V Sbjct: 63 VSATARDPSNGGRGKLGKPAHLEE--LVVTMKSTAAGESVFRVAFEWD-ESQGIPGAVVV 119 Query: 416 KNNHASEFFLKTITLD 463 N++ SEFFLKT+TLD Sbjct: 120 TNSNRSEFFLKTLTLD 135
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 91.3 bits (225), Expect = 1e-18 Identities = 59/153 (38%), Positives = 84/153 (54%), Gaps = 19/153 (12%) Frame = +2 Query: 65 MFGVGGIVSDLTGGLRGAH-LKGSVVLMRKNALDFNDFG------------------ATV 187 MF V G+ L G G H +KG+VVLMRKN LDFN + Sbjct: 1 MFSVPGVSGILNRG--GGHKIKGTVVLMRKNVLDFNSVADLTKGNVGGLIGTGLNVVGST 58 Query: 188 MDGVTELLGRGVTCQLISSTNVAHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVT 367 +D +T LGR V QLIS+T N G+GKVG + LE ++ +LP + GE+ F + Sbjct: 59 LDNLTAFLGRSVALQLISATKPLAN--GKGKVGKDTFLEGIIV--SLPTLGAGESAFNIQ 114 Query: 368 FDWSVDKLGVPGAIIVKNNHASEFFLKTITLDN 466 F+W + +G+PGA +KN EF+LK++TL++ Sbjct: 115 FEWD-ESMGIPGAFYIKNYMQVEFYLKSLTLED 146
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 90.5 bits (223), Expect = 2e-18 Identities = 59/144 (40%), Positives = 84/144 (58%), Gaps = 19/144 (13%) Frame = +2 Query: 92 DLTGGLRGAH-LKGSVVLMRKNALDFN--------------DFGATV----MDGVTELLG 214 ++TG L H ++G+VVLMRKN LDFN D G + +DG+T LG Sbjct: 4 NVTGLLNKGHKIRGTVVLMRKNVLDFNTIVSIGGGNVHGVIDSGINIIGSTLDGLTAFLG 63 Query: 215 RGVTCQLISSTNVAHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLG 394 R V+ QLIS+T N G+GKVG + LE L +LP + GE+ F + F+W ++G Sbjct: 64 RSVSLQLISATKSDAN--GKGKVGKDTFLEGVL--ASLPTLGAGESAFNIHFEWD-HEMG 118 Query: 395 VPGAIIVKNNHASEFFLKTITLDN 466 +PGA +KN EFFLK++TL++ Sbjct: 119 IPGAFYIKNYMQVEFFLKSLTLED 142
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 87.0 bits (214), Expect = 2e-17 Identities = 56/140 (40%), Positives = 82/140 (58%), Gaps = 14/140 (10%) Frame = +2 Query: 89 SDLTGGL-RGAHLKGSVVLMRKNALDFN-------------DFGATVMDGVTELLGRGVT 226 S +TG L RG +KG+VVLMRKN LD N D + +D +T LGR V+ Sbjct: 3 SGVTGILNRGHKIKGTVVLMRKNVLDINSLTTVGGVIGQGFDILGSTVDNLTAFLGRSVS 62 Query: 227 CQLISSTNVAHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGA 406 QLIS+T + G+GK+G LE + ++LP + G++ F + F+W D +G+PGA Sbjct: 63 LQLISATKP--DATGKGKLGKATFLEGII--SSLPTLGAGQSAFKIHFEWD-DDMGIPGA 117 Query: 407 IIVKNNHASEFFLKTITLDN 466 +KN +EFFL ++TLD+ Sbjct: 118 FYIKNFMQTEFFLVSLTLDD 137
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 87.0 bits (214), Expect = 2e-17 Identities = 53/118 (44%), Positives = 74/118 (62%), Gaps = 1/118 (0%) Frame = +2 Query: 113 GAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNV-AHNNGGRGKVGA 289 G +KG+VVLM KN L+ N G+ V D + LGR V+ QLIS+T AH G+GKVG Sbjct: 5 GHKIKGTVVLMPKNELEVNPDGSAV-DNLNAFLGRSVSLQLISATKADAH---GKGKVGK 60 Query: 290 EANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKNNHASEFFLKTITLD 463 + LE + T+LP + GE+ F + F+W +G+PGA +KN EFFLK++TL+ Sbjct: 61 DTFLEG--INTSLPTLGAGESAFNIHFEWD-GSMGIPGAFYIKNYMQVEFFLKSLTLE 115
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 81.3 bits (199), Expect = 1e-15 Identities = 54/139 (38%), Positives = 78/139 (56%), Gaps = 15/139 (10%) Frame = +2 Query: 95 LTGGL--RGAHLKGSVVLMRKNALDFN-------------DFGATVMDGVTELLGRGVTC 229 + GGL RG +KG+VVLMRKN L N D + +D +T LGR V+ Sbjct: 1 MLGGLLHRGHKIKGTVVLMRKNVLHVNSVTSVGGIIGQGLDLVGSTLDTLTAFLGRPVSL 60 Query: 230 QLISSTNVAHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAI 409 QLIS+T N G+GK+G LE + T+LP + G++ F + F+W D G+ GA Sbjct: 61 QLISATKADAN--GKGKLGKATFLEG--IITSLPTLGAGQSAFKINFEWD-DGSGILGAF 115 Query: 410 IVKNNHASEFFLKTITLDN 466 +KN +EFFL ++TL++ Sbjct: 116 YIKNFMQTEFFLVSLTLED 134
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 77.8 bits (190), Expect = 1e-14 Identities = 50/141 (35%), Positives = 74/141 (52%), Gaps = 22/141 (15%) Frame = +2 Query: 110 RGAHLKGSVVLMRKNALDFNDFGAT----------------------VMDGVTELLGRGV 223 RG +KG+VVLM KN DFN+F +T ++DG T + R + Sbjct: 7 RGHKIKGTVVLMTKNVFDFNEFVSTTRGGIVGAAGGLFGAATDIVGGIVDGATAIFSRNI 66 Query: 224 TCQLISSTNVAHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPG 403 QLIS+T + G GKVG + LE+ L +LP + ++ F V F+W + G+P Sbjct: 67 AIQLISATKT--DGLGNGKVGKQTFLEKHL--PSLPNLGDRQDAFNVYFEWD-ENFGIPE 121 Query: 404 AIIVKNNHASEFFLKTITLDN 466 A +KN SEFFL ++TL++ Sbjct: 122 AFYIKNFMQSEFFLVSLTLED 142
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 77.8 bits (190), Expect = 1e-14 Identities = 51/141 (36%), Positives = 73/141 (51%), Gaps = 22/141 (15%) Frame = +2 Query: 110 RGAHLKGSVVLMRKNALDFNDFGAT----------------------VMDGVTELLGRGV 223 +G +KG+VVLM KN LDFN + V+D T LGR + Sbjct: 7 KGQKIKGTVVLMPKNVLDFNAITSIGKGGVIDTATGILGQGVSLVGGVIDTATSFLGRNI 66 Query: 224 TCQLISSTNVAHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPG 403 + QLIS+T + G GKVG E LE+ LPT LP + ++ F++ F+W G+PG Sbjct: 67 SMQLISATQT--DGSGNGKVGKEVYLEKH-LPT-LPTLGARQDAFSIFFEWDA-SFGIPG 121 Query: 404 AIIVKNNHASEFFLKTITLDN 466 A +KN EFFL ++ L++ Sbjct: 122 AFYIKNFMTDEFFLVSVKLED 142
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 74.3 bits (181), Expect = 1e-13 Identities = 50/140 (35%), Positives = 73/140 (52%), Gaps = 21/140 (15%) Frame = +2 Query: 110 RGAHLKGSVVLMRKNALDFN--------------------DFGATVMDGVTELLGRGVTC 229 RG LKG+V+LM+KN LD N +++D T LGR V Sbjct: 8 RGQKLKGTVILMQKNVLDINALTAAQSPSGIIGGAFGVVGSIAGSIIDTATAFLGRSVRL 67 Query: 230 QLISSTNVAHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAI 409 +LIS+T + G+GKV EA LE L T++P + ++ F+V F+W +G PGA Sbjct: 68 RLISAT--VADASGKGKVSKEAFLEGLL--TSIPTLGDKQSAFSVHFEWD-SNMGTPGAF 122 Query: 410 IVKN-NHASEFFLKTITLDN 466 ++N EFFL ++TLD+ Sbjct: 123 YIENFMQGGEFFLVSLTLDD 142
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 73.6 bits (179), Expect = 2e-13 Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 13/134 (9%) Frame = +2 Query: 104 GLRGAHLKGSVVLMRKNALDFND-------------FGATVMDGVTELLGRGVTCQLISS 244 G +G +KG++V+M+KN LD N F + +D +T ++ QLIS+ Sbjct: 5 GQKGQKIKGTMVVMQKNVLDINSITSVGGIVDQGLGFIGSAVDALT-FAATKISIQLISA 63 Query: 245 TNVAHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKNN 424 T +GG+GK+G NL + LP + GE + V F+W D G+PGA +KN Sbjct: 64 TKA---DGGKGKIGKSTNLRGKI---TLPTLGAGEQAYDVNFEWDSD-FGIPGAFYIKNF 116 Query: 425 HASEFFLKTITLDN 466 +EF+LK++ L++ Sbjct: 117 MQNEFYLKSLILED 130
>LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12)| Length = 918 Score = 43.9 bits (102), Expect = 2e-04 Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 1/115 (0%) Frame = +2 Query: 122 LKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNVAHNNGGRGKVGAEANL 301 L+ ++ + RK D + A +D + +++GR V +LIS+ H + ++ Sbjct: 80 LRAALTVRRKQKEDIKEAVAGHLDALWDMVGRNVVLELISTK--IHPRTKKPMQSGRVSI 137 Query: 302 EQWLLPTNLPFITTGENKFAVTFDWSVDK-LGVPGAIIVKNNHASEFFLKTITLD 463 + W G++ T +++VD G PGAI V N H EFFL++I ++ Sbjct: 138 KDWCQKRG----AKGDH-VVYTAEFTVDADFGEPGAIAVANRHNREFFLESIVVE 187
>LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12)| Length = 899 Score = 38.9 bits (89), Expect = 0.007 Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 1/111 (0%) Frame = +2 Query: 134 VVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNVAHNNGGRGKVGAEANLEQWL 313 V + R+ D D A +D + + +GR V +L+S+ G K + L W Sbjct: 72 VTVRRRRKEDAKDRFAEQLDALADRVGRSVLLELVSTETDPRK--GTPKKSKPSALVGWF 129 Query: 314 LPTNLPFITTGENKFAVTFDWSVDK-LGVPGAIIVKNNHASEFFLKTITLD 463 ++ + T +++VD G PGA+ V N H EF++++I ++ Sbjct: 130 DKKDVK-----AERVVYTAEFAVDAGFGEPGAVTVLNRHQREFYIESIVVE 175
>YAI7_SCHPO (Q09894) Hypothetical protein C24B11.07c in chromosome I| Length = 561 Score = 35.8 bits (81), Expect = 0.056 Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 1/76 (1%) Frame = -3 Query: 318 GRSHCSRFASAPTFPRPPLLWATLVELMSWQVTPRPRSSVTPSMTVAPKSLKSSAFLRMR 139 G+ + R SAP+ + + A ++++S RS +PS+ +SLKS R Sbjct: 374 GKPNMGRIPSAPSLSKGRAMTADNMDMLSLTTRRSRRSLYSPSLMQMQQSLKSDYEGLGR 433 Query: 138 TTEPLRWAPR-RPPVR 94 T +P R+APR PPVR Sbjct: 434 TFDP-RFAPRGSPPVR 448
>PKHA4_HUMAN (Q9H4M7) Pleckstrin homology domain-containing family A member 4| (Phosphoinositol 3-phosphate-binding protein 1) (PEPP-1) Length = 779 Score = 35.0 bits (79), Expect = 0.095 Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 5/73 (6%) Frame = -3 Query: 273 RPPLLWATLVELMSWQVTPRPRSSVT-----PSMTVAPKSLKSSAFLRMRTTEPLRWAPR 109 R P L+ L S PRPRS+ PS AP + + R+ PL W P+ Sbjct: 228 RSPDLFTPLSRPPSPLSLPRPRSAPARRPPAPSGDTAPPARPHTPLSRIDVRPPLDWGPQ 287 Query: 108 RPPVRSLTMPPTP 70 R ++L+ PPTP Sbjct: 288 R---QTLSRPPTP 297
>UL14_EHV1V (P84404) Hypothetical gene 48 protein| Length = 317 Score = 31.2 bits (69), Expect = 1.4 Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Frame = -2 Query: 184 GGAEVVEVERVLAHEDDGAL-EVGAPEAPRQVAHDAADAKHLRSNSGECGTLAKLARCGA 8 GG EV + + L HED+ L EAPR AAD RS + ARCGA Sbjct: 132 GGGEVGDPQEWLGHEDEALLMRWMLEEAPRVSTRIAADPHSPRSTCPAPRKAPEDARCGA 191
>UL14_EHV1B (P28949) Hypothetical gene 48 protein| Length = 317 Score = 31.2 bits (69), Expect = 1.4 Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Frame = -2 Query: 184 GGAEVVEVERVLAHEDDGAL-EVGAPEAPRQVAHDAADAKHLRSNSGECGTLAKLARCGA 8 GG EV + + L HED+ L EAPR AAD RS + ARCGA Sbjct: 132 GGGEVGDPQEWLGHEDEALLMRWMLEEAPRVSTRIAADPHSPRSTCPAPRKAPEDARCGA 191
>IWS1_XENTR (Q505H7) IWS1-like protein| Length = 909 Score = 31.2 bits (69), Expect = 1.4 Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 6/53 (11%) Frame = -2 Query: 187 DGGAEVVEVERVLAHEDDG-----ALEVGAPEAPRQVAH-DAADAKHLRSNSG 47 DGGA V+ ER A +D+G E G+PE + H D D KH RS+SG Sbjct: 15 DGGATPVQDERDSASDDEGNEREQRSEPGSPERQSEDEHSDIEDNKH-RSDSG 66
>YPHD_ECOLI (P77315) Hypothetical ABC transporter permease protein yphD| Length = 332 Score = 30.4 bits (67), Expect = 2.3 Identities = 21/57 (36%), Positives = 30/57 (52%) Frame = +2 Query: 50 RVRAKMFGVGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRG 220 RVR +F + G+++ +TG L A L GS N L+F+ A V+ G GRG Sbjct: 221 RVRILIFTLSGLLAAVTGILLAARL-GSGNAGAANGLEFDVIAAVVVGGTALSGGRG 276
>USH1C_MOUSE (Q9ES64) Harmonin (Usher syndrome type-1C protein homolog) (PDZ| domain-containing protein) Length = 910 Score = 30.4 bits (67), Expect = 2.3 Identities = 19/54 (35%), Positives = 26/54 (48%) Frame = -3 Query: 225 VTPRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWAPRRPPVRSLTMPPTPNI 64 V P P S +PS AP L SS + ++ W R PP + +PP P+I Sbjct: 563 VMPHPPSVNSPSKVPAPPVLPSSGHVSSSSSP---WVQRTPP--PIPIPPPPSI 611
>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)| Length = 5179 Score = 30.0 bits (66), Expect = 3.1 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 2/72 (2%) Frame = -3 Query: 282 TFPRPPLLWATLVELMSWQVTPRPRSSVT--PSMTVAPKSLKSSAFLRMRTTEPLRWAPR 109 T P PP M+ +TP P S+ T P+ T +P + ++ T P P Sbjct: 1498 TTPSPP---------MTTPITP-PASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPI 1547 Query: 108 RPPVRSLTMPPT 73 PP + T+PPT Sbjct: 1548 TPPTSTTTLPPT 1559 Score = 29.3 bits (64), Expect = 5.2 Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 4/74 (5%) Frame = -3 Query: 282 TFPRPPLLWATLVELMSWQVTPRPRSSVT----PSMTVAPKSLKSSAFLRMRTTEPLRWA 115 T P PP + T + TP P ++ T P+ T +P + TT P Sbjct: 1584 TTPSPPTITTTTPPPTT---TPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTT 1640 Query: 114 PRRPPVRSLTMPPT 73 P PP + T PPT Sbjct: 1641 PSPPPTTTTTPPPT 1654 Score = 28.9 bits (63), Expect = 6.8 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 2/72 (2%) Frame = -3 Query: 282 TFPRPPLLWATLVELMSWQVTPRPRSSVT--PSMTVAPKSLKSSAFLRMRTTEPLRWAPR 109 T P PP+ T + TP P ++ P+ T +P + ++ T P P Sbjct: 1452 TTPSPPISTTTTPPPTT---TPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPMTTPI 1508 Query: 108 RPPVRSLTMPPT 73 PP + T+PPT Sbjct: 1509 TPPASTTTLPPT 1520
>MEGF9_MOUSE (Q8BH27) Multiple epidermal growth factor-like domains 9 precursor| (EGF-like domain-containing protein 5) (Multiple EGF-like domain protein 5) Length = 600 Score = 30.0 bits (66), Expect = 3.1 Identities = 20/70 (28%), Positives = 30/70 (42%) Frame = -3 Query: 309 HCSRFASAPTFPRPPLLWATLVELMSWQVTPRPRSSVTPSMTVAPKSLKSSAFLRMRTTE 130 H S P+ P P L +T+ + + V ++S TP A +SS + T Sbjct: 128 HTPTTESPPSRPAPTTLASTVGQPPTTSVVTTAQASSTPGTPTAESPDRSSNSSGVPPTA 187 Query: 129 PLRWAPRRPP 100 P+ AP PP Sbjct: 188 PVTEAPTSPP 197
>NPAS3_HUMAN (Q8IXF0) Neuronal PAS domain protein 3 (Neuronal PAS3) (Member of| PAS protein 6) (MOP6) Length = 933 Score = 29.6 bits (65), Expect = 4.0 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = -3 Query: 222 TPRPRSSVTPSMTVAPKSLKSSAFLRMRTT 133 TP P S +PS+ +L+ S F+RM++T Sbjct: 241 TPEPVESTSPSLLTTDNTLERSFFIRMKST 270
>IWS1A_XENLA (Q6DE96) IWS1-like protein A| Length = 836 Score = 29.6 bits (65), Expect = 4.0 Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 4/51 (7%) Frame = -2 Query: 187 DGGAEVVEVERVLAHEDDG---ALEVGAPEAPRQVAH-DAADAKHLRSNSG 47 DGGA V+ ER A +D+G E G+PE + H D D KH S+SG Sbjct: 13 DGGATPVQDERDSASDDEGNEQRSEPGSPEHQSEDEHSDVEDHKH-SSDSG 62
>RMT2_ASHGO (Q759W1) Arginine N-methyltransferase 2 (EC 2.1.1.-)| Length = 413 Score = 29.6 bits (65), Expect = 4.0 Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 6/69 (8%) Frame = +2 Query: 248 NVAHNNGGRGKVGAEANL--EQWLLPTNLPFI----TTGENKFAVTFDWSVDKLGVPGAI 409 + H++ V A+A + L T L +I T N+ V DW D + V A Sbjct: 176 SAGHSSSEPTAVDADATAAHQDTYLQTELEYIPGALVTKHNRDGVMMDWETDIMRVAAAS 235 Query: 410 IVKNNHASE 436 IVKN +E Sbjct: 236 IVKNREPAE 244
>PROML_BRARE (Q9W735) Prominin-like protein (Fragment)| Length = 713 Score = 29.6 bits (65), Expect = 4.0 Identities = 21/83 (25%), Positives = 37/83 (44%) Frame = +2 Query: 146 RKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNVAHNNGGRGKVGAEANLEQWLLPTN 325 RKNA F DF T++ T ++ GV C ++ N++ G + L+ +N Sbjct: 144 RKNADCFEDFLTTLLLTTTFIITAGVLCAYAANQNLSSQLKGMRR----------LVKSN 193 Query: 326 LPFITTGENKFAVTFDWSVDKLG 394 L + T N+ D+ + + G Sbjct: 194 LKDLHTFANQTPAQIDYLISRYG 216
>TRPM2_HUMAN (O94759) Transient receptor potential cation channel subfamily M| member 2 (EC 3.6.1.13) (Long transient receptor potential channel 2) (LTrpC2) (LTrpC-2) (Transient receptor potential channel 7) (TrpC7) (Estrogen-responsive element-associated Length = 1503 Score = 29.6 bits (65), Expect = 4.0 Identities = 16/36 (44%), Positives = 22/36 (61%) Frame = +2 Query: 140 LMRKNALDFNDFGATVMDGVTELLGRGVTCQLISST 247 LM+K AL F+DF + G L G+TC+LI +T Sbjct: 856 LMKKAALYFSDFWNKLDVGAILLFVAGLTCRLIPAT 891
>GLTB_MAIZE (P23225) Ferredoxin-dependent glutamate synthase, chloroplast| precursor (EC 1.4.7.1) (Fd-GOGAT) Length = 1616 Score = 29.6 bits (65), Expect = 4.0 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = -2 Query: 115 APEAPRQVAHDAADAKHLRSNSGECG 38 AP AP++ AAD H+ S G CG Sbjct: 74 APPAPQKPTQQAADLNHILSERGACG 99
>PCPB_SPHCR (P42535) Pentachlorophenol 4-monooxygenase (EC 1.14.13.50)| (Pentachlorophenol hydroxylase) Length = 537 Score = 29.6 bits (65), Expect = 4.0 Identities = 19/67 (28%), Positives = 29/67 (43%) Frame = +2 Query: 176 GATVMDGVTELLGRGVTCQLISSTNVAHNNGGRGKVGAEANLEQWLLPTNLPFITTGENK 355 G T + ELL RGV+C++I VAH + A + + +I TG Sbjct: 22 GPTGLIAANELLRRGVSCRMIDRLPVAHQTSKSCTIHARSMEMMEHIGIAARYIETGVRS 81 Query: 356 FAVTFDW 376 TF++ Sbjct: 82 NGFTFNF 88
>CAGE_HELPY (Q48252) CAG pathogenicity island protein 23 (Protein picB)| Length = 983 Score = 29.3 bits (64), Expect = 5.2 Identities = 22/70 (31%), Positives = 31/70 (44%) Frame = +2 Query: 230 QLISSTNVAHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAI 409 QLI++ HN+ G A L + TN F +NK D+S +GV G+ Sbjct: 742 QLINAFGKDHNDPN----GLVARLAPFCKSTNGEFQWLFDNKATDRLDFSKTIIGVDGSS 797 Query: 410 IVKNNHASEF 439 + NN S F Sbjct: 798 FLDNNDVSPF 807
>CAGE_HELPJ (Q9ZLT4) CAG pathogenicity island protein 23 (Protein picB)| Length = 983 Score = 29.3 bits (64), Expect = 5.2 Identities = 22/70 (31%), Positives = 31/70 (44%) Frame = +2 Query: 230 QLISSTNVAHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAI 409 QLI++ HN+ G A L + TN F +NK D+S +GV G+ Sbjct: 742 QLINAFGKDHNDPN----GLVARLAPFCKSTNGEFQWLFDNKATDRLDFSKTIIGVDGSS 797 Query: 410 IVKNNHASEF 439 + NN S F Sbjct: 798 FLDNNDVSPF 807
>PGBM_MOUSE (Q05793) Basement membrane-specific heparan sulfate proteoglycan core| protein precursor (HSPG) (Perlecan) (PLC) Length = 3707 Score = 28.9 bits (63), Expect = 6.8 Identities = 16/61 (26%), Positives = 27/61 (44%) Frame = -3 Query: 408 MAPGTPSLSTDQSKVTANLFSPVVMNGRFVGRSHCSRFASAPTFPRPPLLWATLVELMSW 229 +APGTP + ++S++T + HCS + P P + W+ L + W Sbjct: 2528 VAPGTPQVQVEESELT--------LEAGHTATLHCSATGNPP----PTIHWSKLRAPLPW 2575 Query: 228 Q 226 Q Sbjct: 2576 Q 2576
>EXTN_SORBI (P24152) Extensin precursor (Proline-rich glycoprotein)| Length = 283 Score = 28.9 bits (63), Expect = 6.8 Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 1/76 (1%) Frame = -3 Query: 285 PTFPRP-PLLWATLVELMSWQVTPRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWAPR 109 P P+P P + + S P P++S P+ T +PK T+P + Sbjct: 84 PATPKPTPPTYTPSPKPKSPVYPPPPKASTPPTYTPSPKP---------PATKPPTYPTP 134 Query: 108 RPPVRSLTMPPTPNIF 61 +PP T PPTP ++ Sbjct: 135 KPPA---TKPPTPPVY 147
>Y091_NPVOP (O10341) Hypothetical 29.3 kDa protein (ORF92)| Length = 279 Score = 28.9 bits (63), Expect = 6.8 Identities = 19/51 (37%), Positives = 20/51 (39%) Frame = -3 Query: 222 TPRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWAPRRPPVRSLTMPPTP 70 TP P S TPS T P S T P P P S T PP+P Sbjct: 136 TPSPTPSPTPSPTPTPSPTPSPTPTPSPTPSP---TPTPSPTPSPTPPPSP 183
>CSKI1_HUMAN (Q8WXD9) Caskin-1 (CASK-interacting protein 1)| Length = 1431 Score = 28.9 bits (63), Expect = 6.8 Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 1/71 (1%) Frame = -3 Query: 285 PTFPRPPLLWATLVELMSWQVTPRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPL-RWAPR 109 PT + PL E+ TP P S P APK +K+ A L + P +P Sbjct: 1245 PTSKKVPLPGPGSPEVKRAHGTPPPVSPKPPPPPTAPKPVKAVAGLPSGSAGPSPAPSPA 1304 Query: 108 RPPVRSLTMPP 76 R P +L PP Sbjct: 1305 RQPPAALAKPP 1315
>LOXB_PHAVU (P27481) Lipoxygenase (EC 1.13.11.12) (Fragment)| Length = 741 Score = 28.9 bits (63), Expect = 6.8 Identities = 11/24 (45%), Positives = 18/24 (75%) Frame = +2 Query: 395 VPGAIIVKNNHASEFFLKTITLDN 466 +PGA +KN EF+LK++TL++ Sbjct: 1 IPGAFYIKNFMQVEFYLKSLTLED 24
>SIPD_SALTY (Q56026) Cell invasion protein sipD (Salmonella invasion protein D)| Length = 343 Score = 28.9 bits (63), Expect = 6.8 Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 11/69 (15%) Frame = +2 Query: 230 QLISSTNVAHNNGGRG-KVGAEANLEQWLLPTNLP--FITTGENKFAVTFDWS------- 379 Q+ S+T + G G KV EA QWL NLP + + + + VT D + Sbjct: 207 QINSNTVLFPAQSGSGVKVATEAEARQWLSELNLPNSCLKSYGSGYVVTVDLTPLQKMVQ 266 Query: 380 -VDKLGVPG 403 +D LG PG Sbjct: 267 DIDGLGAPG 275
>IF2_SYNY3 (P72689) Translation initiation factor IF-2| Length = 1001 Score = 28.5 bits (62), Expect = 8.9 Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 2/73 (2%) Frame = -3 Query: 288 APTFPRPPLLWATLVELMSWQVTPR--PRSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWA 115 APT P+PP+ A+ ++ + + P+S P+ +AP + S + P A Sbjct: 114 APTPPQPPVAKASAPKIQKQEEPAQEAPKSVAPPTQPLAPPPVPSLQSPPSKPAPPTPPA 173 Query: 114 PRRPPVRSLTMPP 76 + P L PP Sbjct: 174 KKAAPAPRLAGPP 186
>PEPP2_HUMAN (Q9BQY4) Paired-like homeobox protein PEPP-2 (Testis homeobox gene| 1) Length = 288 Score = 28.5 bits (62), Expect = 8.9 Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 1/53 (1%) Frame = -3 Query: 417 LTMMAPGTPSLSTDQSKVTANLFSPVVMNGRFVGRSHCSRFA-SAPTFPRPPL 262 L MA G P + T +TA LF + + F SH S P FP P L Sbjct: 202 LPFMAVGQPVMVTAAEAITAPLFISGMRDDYFWDHSHSSSLCFPMPPFPPPSL 254
>NPAS3_MOUSE (Q9QZQ0) Neuronal PAS domain protein 3 (Neuronal PAS3) (Member of| PAS protein 6) (MOP6) Length = 925 Score = 28.5 bits (62), Expect = 8.9 Identities = 11/30 (36%), Positives = 19/30 (63%) Frame = -3 Query: 222 TPRPRSSVTPSMTVAPKSLKSSAFLRMRTT 133 TP P + +PS+ +L+ S F+RM++T Sbjct: 246 TPEPVETTSPSLLTTDNTLERSFFIRMKST 275
>MCM3A_MOUSE (Q9WUU9) 80 kda MCM3-associated protein (GANP protein)| Length = 1971 Score = 28.5 bits (62), Expect = 8.9 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = -3 Query: 219 PRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWAPRRPPVRS 91 P P SS TP++ V P + ++ L +T+P P+ PV S Sbjct: 1026 PPPASSATPALHVQPLAPAAAPSLLQASTQPEVLLPKPAPVYS 1068
>TLP_PRUAV (P50694) Thaumatin-like protein precursor| Length = 245 Score = 28.5 bits (62), Expect = 8.9 Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 10/51 (19%) Frame = -3 Query: 411 MMAPGT------PSLSTD----QSKVTANLFSPVVMNGRFVGRSHCSRFAS 289 M+ PGT P LST S+ + L +PV NGRF R+ CS AS Sbjct: 35 MVWPGTLTSDQKPQLSTTGFELASQASFQLDTPVPWNGRFWARTGCSTDAS 85 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,272,538 Number of Sequences: 219361 Number of extensions: 852705 Number of successful extensions: 3689 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 3496 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3637 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3014947676 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
