ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl03g09 |
|---|---|
| Clone Library Name | barley_pub |
>WSC4_YEAST (P38739) Cell wall integrity and stress response component 4| precursor Length = 605 Score = 35.4 bits (80), Expect = 0.073 Identities = 25/83 (30%), Positives = 40/83 (48%) Frame = -2 Query: 450 STSSPTRSTQASTVARHASASFWSDGSWRTSERRPCVRTASTMEASSSGWTVLPGCGIRS 271 ST+S T +T +++ + + S S S TS + + ST +SSS T I + Sbjct: 194 STTSSTSTTTSTSSSTSTTVSVTSSTSTTTSTTSSTLISTSTSSSSSSTPTTTSSAPIST 253 Query: 270 PTTTRSRRGLSQLSFTSARKPTA 202 TT+ + S S TS+ PT+ Sbjct: 254 STTSSTSTSTSTTSPTSSSAPTS 276 Score = 30.8 bits (68), Expect = 1.8 Identities = 25/85 (29%), Positives = 42/85 (49%) Frame = -2 Query: 450 STSSPTRSTQASTVARHASASFWSDGSWRTSERRPCVRTASTMEASSSGWTVLPGCGIRS 271 S++S T ST +ST+ +++S S S T+ + T++T S+S T P S Sbjct: 217 SSTSTTTSTTSSTLISTSTSS--SSSSTPTTTSSAPISTSTTSSTSTSTSTTSPTSS--S 272 Query: 270 PTTTRSRRGLSQLSFTSARKPTAPA 196 T+ S + +FT+ TAP+ Sbjct: 273 APTSSSNTTPTSTTFTTTSPSTAPS 297
>YLS6_CAEEL (P34391) Putative cuticle collagen F09G8.6| Length = 278 Score = 34.3 bits (77), Expect = 0.16 Identities = 14/32 (43%), Positives = 17/32 (53%) Frame = +1 Query: 304 AGGACLHCRGGAHARSPLRGPPGPVGPKARRG 399 AGGAC+ C G + G PGP GP + G Sbjct: 127 AGGACIQCPAGEAGPAGAPGAPGPAGPDGQPG 158
>YIA_RHISP (P17986) Insertion element ISR1 hypothetical 30.8 kDa protein A| Length = 278 Score = 34.3 bits (77), Expect = 0.16 Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 6/89 (6%) Frame = -2 Query: 447 TSSPTRSTQA------STVARHASASFWSDGSWRTSERRPCVRTASTMEASSSGWTVLPG 286 T+S +R+T+A +T A+H+ + R +RRP V ++T A+S+GW G Sbjct: 17 TASNSRTTRAPDSEVSATSAKHSRVQL--SITVRMRKRRPSVSWSATKSATSAGWAPAAG 74 Query: 285 CGIRSPTTTRSRRGLSQLSFTSARKPTAP 199 G R P R RR + A P P Sbjct: 75 HGRRVP-IARLRRAPAHRQLLVAIDPLDP 102
>CO1A2_RANCA (O42350) Collagen alpha-2(I) chain precursor| Length = 1355 Score = 33.5 bits (75), Expect = 0.28 Identities = 19/51 (37%), Positives = 24/51 (47%) Frame = +1 Query: 250 SAPSGGWRADAAAGEHRPAGGACLHCRGGAHARSPLRGPPGPVGPKARRGV 402 + PSG A AG PAG + GG + + GP GP GP +GV Sbjct: 945 TGPSGLAGAPGPAGSAGPAGKSGNRGEGGPSGPAGITGPSGPRGPAGPQGV 995
>CO1A2_MOUSE (Q01149) Collagen alpha-2(I) chain precursor| Length = 1372 Score = 32.7 bits (73), Expect = 0.47 Identities = 20/51 (39%), Positives = 26/51 (50%) Frame = +1 Query: 250 SAPSGGWRADAAAGEHRPAGGACLHCRGGAHARSPLRGPPGPVGPKARRGV 402 + PSG D +G+ P G A + RG ++ P GPPGP GP GV Sbjct: 1062 AGPSGPVGKDGRSGQPGPVGPAGV--RGSQGSQGPA-GPPGPPGPPGPPGV 1109 Score = 28.9 bits (63), Expect = 6.8 Identities = 16/47 (34%), Positives = 20/47 (42%) Frame = +1 Query: 259 SGGWRADAAAGEHRPAGGACLHCRGGAHARSPLRGPPGPVGPKARRG 399 +G A GE PAG G +GPPGP G + +RG Sbjct: 342 AGATGARGLVGEPGPAGSKGESGNKGEPGSVGAQGPPGPSGEEGKRG 388
>CO5A1_RAT (Q9JI03) Collagen alpha-1(V) chain precursor| Length = 1840 Score = 29.3 bits (64), Expect = 5.2 Identities = 10/14 (71%), Positives = 12/14 (85%) Frame = +1 Query: 358 RGPPGPVGPKARRG 399 RGPPGP GP+ R+G Sbjct: 1394 RGPPGPAGPEGRQG 1407 Score = 27.7 bits (60), Expect(2) = 0.50 Identities = 16/42 (38%), Positives = 18/42 (42%) Frame = +1 Query: 256 PSGGWRADAAAGEHRPAGGACLHCRGGAHARSPLRGPPGPVG 381 P+G A GE P G L + G GPPGPVG Sbjct: 1189 PTGQPGPSGADGEPGPRGQQGLFGQKGDEGSRGFPGPPGPVG 1230 Score = 23.5 bits (49), Expect(2) = 0.50 Identities = 8/13 (61%), Positives = 9/13 (69%) Frame = +1 Query: 361 GPPGPVGPKARRG 399 GPPGP GP+ G Sbjct: 1251 GPPGPPGPRGPSG 1263
>CO3A1_MOUSE (P08121) Collagen alpha-1(III) chain precursor| Length = 1464 Score = 32.3 bits (72), Expect = 0.62 Identities = 17/48 (35%), Positives = 21/48 (43%) Frame = +1 Query: 256 PSGGWRADAAAGEHRPAGGACLHCRGGAHARSPLRGPPGPVGPKARRG 399 P G A GE GG L G + + +GPPGP GP +G Sbjct: 582 PKGNDGAPGKNGERGGPGGPGLPGPAGKNGETGPQGPPGPTGPAGDKG 629 Score = 30.0 bits (66), Expect = 3.1 Identities = 23/55 (41%), Positives = 25/55 (45%), Gaps = 3/55 (5%) Frame = +1 Query: 244 ATSAPSGGWRADAAAGEHRPAGGACLH-CRGGAHARSPL--RGPPGPVGPKARRG 399 A AP GG A GE P G A + RGGA P +GP GP GP G Sbjct: 666 APGAP-GGKGDSGAPGERGPPGTAGIPGARGGAGPPGPEGGKGPAGPPGPPGASG 719
>CO3A1_CHICK (P12105) Collagen alpha-1(III) chain precursor (Fragments)| Length = 1262 Score = 32.3 bits (72), Expect = 0.62 Identities = 18/48 (37%), Positives = 19/48 (39%) Frame = +1 Query: 256 PSGGWRADAAAGEHRPAGGACLHCRGGAHARSPLRGPPGPVGPKARRG 399 P G A GE P G G + L GPPGP GP RG Sbjct: 582 PKGNEGAPGKNGERGPGGPPGTPGPAGKNGDVGLPGPPGPAGPAGDRG 629 Score = 30.8 bits (68), Expect = 1.8 Identities = 18/48 (37%), Positives = 21/48 (43%) Frame = +1 Query: 256 PSGGWRADAAAGEHRPAGGACLHCRGGAHARSPLRGPPGPVGPKARRG 399 P+G A AGE G G+ S RGPPGP GP + G Sbjct: 906 PAGNNGAPGKAGERGFQGPLGPQGAIGSPGASGARGPPGPAGPPGKDG 953
>EMID1_MOUSE (Q91VF5) EMI domain-containing protein 1 precursor (Protein Emu1)| (Emilin and multimerin domain-containing protein 1) Length = 444 Score = 32.3 bits (72), Expect = 0.62 Identities = 14/26 (53%), Positives = 18/26 (69%), Gaps = 2/26 (7%) Frame = +1 Query: 328 RGGAHARSP--LRGPPGPVGPKARRG 399 +GG ++SP +RGPPGP GP R G Sbjct: 208 KGGTDSQSPVRIRGPPGPQGPPGRPG 233
>CO2A1_MOUSE (P28481) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1459 Score = 32.0 bits (71), Expect = 0.80 Identities = 18/48 (37%), Positives = 19/48 (39%) Frame = +1 Query: 256 PSGGWRADAAAGEHRPAGGACLHCRGGAHARSPLRGPPGPVGPKARRG 399 P G AGE AG L G + GPPGP GP RG Sbjct: 579 PKGANGEPGKAGEKGLAGAPGLRGLPGKDGETGAAGPPGPSGPAGERG 626 Score = 32.0 bits (71), Expect = 0.80 Identities = 17/47 (36%), Positives = 21/47 (44%) Frame = +1 Query: 259 SGGWRADAAAGEHRPAGGACLHCRGGAHARSPLRGPPGPVGPKARRG 399 +G + A A G AGGA + G RGPPGP G +G Sbjct: 148 AGNFAAQMAGGYDEKAGGAQMGVMQGPMGPMGPRGPPGPAGAPGPQG 194 Score = 28.5 bits (62), Expect = 8.9 Identities = 13/22 (59%), Positives = 13/22 (59%) Frame = +1 Query: 334 GAHARSPLRGPPGPVGPKARRG 399 GA S RGPPGPVGP G Sbjct: 980 GAPGASGDRGPPGPVGPPGLTG 1001
>VGLX_EHV1V (Q6S6W0) Glycoprotein X precursor| Length = 866 Score = 32.0 bits (71), Expect = 0.80 Identities = 26/89 (29%), Positives = 39/89 (43%) Frame = -2 Query: 456 SLSTSSPTRSTQASTVARHASASFWSDGSWRTSERRPCVRTASTMEASSSGWTVLPGCGI 277 S TSSP+ ++ S+ S+S S S TS P + T + + T P Sbjct: 67 STHTSSPSSTSTQSSSTAATSSSAPSTASSTTSI--PTSTSTETTTTTPTASTTTPTTTT 124 Query: 276 RSPTTTRSRRGLSQLSFTSARKPTAPAIA 190 +PTT + ++ + TSA TA A A Sbjct: 125 AAPTTAATTTAVTTAASTSAETTTATATA 153
>CO2A1_HUMAN (P02458) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1418 Score = 32.0 bits (71), Expect = 0.80 Identities = 18/46 (39%), Positives = 20/46 (43%) Frame = +1 Query: 262 GGWRADAAAGEHRPAGGACLHCRGGAHARSPLRGPPGPVGPKARRG 399 G + A A G AGGA L G RGPPGP G +G Sbjct: 108 GNFAAQMAGGFDEKAGGAQLGVMQGPMGPMGPRGPPGPAGAPGPQG 153 Score = 31.2 bits (69), Expect = 1.4 Identities = 17/48 (35%), Positives = 18/48 (37%) Frame = +1 Query: 256 PSGGWRADAAAGEHRPAGGACLHCRGGAHARSPLRGPPGPVGPKARRG 399 P G AGE G L G + GPPGP GP RG Sbjct: 538 PKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAEGPPGPAGPAGERG 585 Score = 28.5 bits (62), Expect = 8.9 Identities = 13/22 (59%), Positives = 13/22 (59%) Frame = +1 Query: 334 GAHARSPLRGPPGPVGPKARRG 399 GA S RGPPGPVGP G Sbjct: 939 GAPGASGDRGPPGPVGPPGLTG 960
>CO1A1_CHICK (P02457) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 32.0 bits (71), Expect = 0.80 Identities = 20/48 (41%), Positives = 22/48 (45%) Frame = +1 Query: 256 PSGGWRADAAAGEHRPAGGACLHCRGGAHARSPLRGPPGPVGPKARRG 399 PSG A AG P G A GA + L G PGP+GP RG Sbjct: 1120 PSG---ASGPAGPRGPPGSA------GAAGKDGLNGLPGPIGPPGPRG 1158 Score = 28.5 bits (62), Expect = 8.9 Identities = 15/48 (31%), Positives = 17/48 (35%) Frame = +1 Query: 256 PSGGWRADAAAGEHRPAGGACLHCRGGAHARSPLRGPPGPVGPKARRG 399 P G GE G G + +GPPGP GP RG Sbjct: 574 PKGAAGEPGKPGERGAPGPPGAVGAAGKDGEAGAQGPPGPTGPAGERG 621
>CO1A2_RAT (P02466) Collagen alpha-2(I) chain precursor| Length = 1372 Score = 32.0 bits (71), Expect = 0.80 Identities = 20/51 (39%), Positives = 25/51 (49%) Frame = +1 Query: 250 SAPSGGWRADAAAGEHRPAGGACLHCRGGAHARSPLRGPPGPVGPKARRGV 402 + PSG D +G P G A + RG ++ P GPPGP GP GV Sbjct: 1062 AGPSGPIGKDGRSGHPGPVGPAGV--RGSQGSQGPA-GPPGPPGPPGPPGV 1109
>CO1A1_HUMAN (P02452) Collagen alpha-1(I) chain precursor| Length = 1464 Score = 32.0 bits (71), Expect = 0.80 Identities = 20/48 (41%), Positives = 22/48 (45%) Frame = +1 Query: 256 PSGGWRADAAAGEHRPAGGACLHCRGGAHARSPLRGPPGPVGPKARRG 399 PSG A AG P G A GA + L G PGP+GP RG Sbjct: 1131 PSG---ASGPAGPRGPPGSA------GAPGKDGLNGLPGPIGPPGPRG 1169 Score = 29.6 bits (65), Expect = 4.0 Identities = 18/50 (36%), Positives = 21/50 (42%) Frame = +1 Query: 250 SAPSGGWRADAAAGEHRPAGGACLHCRGGAHARSPLRGPPGPVGPKARRG 399 + P G A A G PAG + G + GP GPVGP RG Sbjct: 1042 AGPPGAPGAPGAPGPVGPAG------KSGDRGETGPAGPAGPVGPAGARG 1085 Score = 29.6 bits (65), Expect = 4.0 Identities = 16/48 (33%), Positives = 18/48 (37%) Frame = +1 Query: 256 PSGGWRADAAAGEHRPAGGACLHCRGGAHARSPLRGPPGPVGPKARRG 399 P G AGE G G + +GPPGP GP RG Sbjct: 585 PKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERG 632
>CO2A1_RAT (P05539) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1419 Score = 32.0 bits (71), Expect = 0.80 Identities = 18/48 (37%), Positives = 19/48 (39%) Frame = +1 Query: 256 PSGGWRADAAAGEHRPAGGACLHCRGGAHARSPLRGPPGPVGPKARRG 399 P G AGE AG L G + GPPGP GP RG Sbjct: 539 PKGANGEPGKAGEKGLAGAPGLRGLPGKDGETGAAGPPGPSGPAGERG 586 Score = 31.2 bits (69), Expect = 1.4 Identities = 17/46 (36%), Positives = 20/46 (43%) Frame = +1 Query: 262 GGWRADAAAGEHRPAGGACLHCRGGAHARSPLRGPPGPVGPKARRG 399 G + A A G AGGA + G RGPPGP G +G Sbjct: 109 GNFAAQMAGGFDEKAGGAQMGVMQGPMGPMGPRGPPGPAGAPGPQG 154 Score = 28.5 bits (62), Expect = 8.9 Identities = 13/22 (59%), Positives = 13/22 (59%) Frame = +1 Query: 334 GAHARSPLRGPPGPVGPKARRG 399 GA S RGPPGPVGP G Sbjct: 940 GAPGASGDRGPPGPVGPPGLTG 961
>VGLX_EHV1B (P28968) Glycoprotein X precursor| Length = 797 Score = 32.0 bits (71), Expect = 0.80 Identities = 26/89 (29%), Positives = 39/89 (43%) Frame = -2 Query: 456 SLSTSSPTRSTQASTVARHASASFWSDGSWRTSERRPCVRTASTMEASSSGWTVLPGCGI 277 S TSSP+ ++ S+ S+S S S TS P + T + + T P Sbjct: 67 STHTSSPSSTSTQSSSTAATSSSAPSTASSTTSI--PTSTSTETTTTTPTASTTTPTTTT 124 Query: 276 RSPTTTRSRRGLSQLSFTSARKPTAPAIA 190 +PTT + ++ + TSA TA A A Sbjct: 125 AAPTTAATTTAVTTAASTSAETTTATATA 153
>CO5A1_CRILO (Q60467) Collagen alpha-1(V) chain precursor| Length = 1840 Score = 29.3 bits (64), Expect = 5.2 Identities = 10/14 (71%), Positives = 12/14 (85%) Frame = +1 Query: 358 RGPPGPVGPKARRG 399 RGPPGP GP+ R+G Sbjct: 1394 RGPPGPAGPEGRQG 1407 Score = 26.6 bits (57), Expect(2) = 1.1 Identities = 16/42 (38%), Positives = 17/42 (40%) Frame = +1 Query: 256 PSGGWRADAAAGEHRPAGGACLHCRGGAHARSPLRGPPGPVG 381 P G A GE P G L + G GPPGPVG Sbjct: 1189 PIGQPGPSGADGEPGPRGQQGLFGQKGDEGSRGFPGPPGPVG 1230 Score = 23.5 bits (49), Expect(2) = 1.1 Identities = 8/13 (61%), Positives = 9/13 (69%) Frame = +1 Query: 361 GPPGPVGPKARRG 399 GPPGP GP+ G Sbjct: 1251 GPPGPPGPRGPSG 1263
>CO5A1_MOUSE (O88207) Collagen alpha-1(V) chain precursor| Length = 1838 Score = 29.3 bits (64), Expect = 5.2 Identities = 10/14 (71%), Positives = 12/14 (85%) Frame = +1 Query: 358 RGPPGPVGPKARRG 399 RGPPGP GP+ R+G Sbjct: 1392 RGPPGPAGPEGRQG 1405 Score = 26.6 bits (57), Expect(2) = 1.1 Identities = 16/42 (38%), Positives = 17/42 (40%) Frame = +1 Query: 256 PSGGWRADAAAGEHRPAGGACLHCRGGAHARSPLRGPPGPVG 381 P G A GE P G L + G GPPGPVG Sbjct: 1187 PIGQPGPSGADGEPGPRGQQGLFGQKGDEGSRGFPGPPGPVG 1228 Score = 23.5 bits (49), Expect(2) = 1.1 Identities = 8/13 (61%), Positives = 9/13 (69%) Frame = +1 Query: 361 GPPGPVGPKARRG 399 GPPGP GP+ G Sbjct: 1249 GPPGPPGPRGPSG 1261
>CO5A1_HUMAN (P20908) Collagen alpha-1(V) chain precursor| Length = 1838 Score = 29.3 bits (64), Expect = 5.2 Identities = 10/14 (71%), Positives = 12/14 (85%) Frame = +1 Query: 358 RGPPGPVGPKARRG 399 RGPPGP GP+ R+G Sbjct: 1392 RGPPGPAGPEGRQG 1405 Score = 26.2 bits (56), Expect(2) = 1.4 Identities = 16/42 (38%), Positives = 17/42 (40%) Frame = +1 Query: 256 PSGGWRADAAAGEHRPAGGACLHCRGGAHARSPLRGPPGPVG 381 P G A GE P G L + G GPPGPVG Sbjct: 1187 PIGQPGPSGADGEPGPRGQQGLFGQKGDEGPRGFPGPPGPVG 1228 Score = 23.5 bits (49), Expect(2) = 1.4 Identities = 8/13 (61%), Positives = 9/13 (69%) Frame = +1 Query: 361 GPPGPVGPKARRG 399 GPPGP GP+ G Sbjct: 1249 GPPGPPGPRGPSG 1261
>COIA1_MOUSE (P39061) Collagen alpha-1(XVIII) chain precursor [Contains:| Endostatin] Length = 1774 Score = 31.2 bits (69), Expect = 1.4 Identities = 23/86 (26%), Positives = 27/86 (31%), Gaps = 5/86 (5%) Frame = +1 Query: 157 RPPPVTDPSL-----TSDGXXXXXXXXXXXQLA*ATSAPSGGWRADAAAGEHRPAGGACL 321 +PPPVT P L T D A + P G P G Sbjct: 725 QPPPVTSPPLAGGSTTEDPRTEETEEDAAVDSIGAETLPGTGSSGAWDEAIQNPGRGLIK 784 Query: 322 HCRGGAHARSPLRGPPGPVGPKARRG 399 G +GPPGP GP+ G Sbjct: 785 GGMKGQKGEPGAQGPPGPAGPQGPAG 810 Score = 30.0 bits (66), Expect = 3.1 Identities = 14/33 (42%), Positives = 16/33 (48%) Frame = +1 Query: 301 PAGGACLHCRGGAHARSPLRGPPGPVGPKARRG 399 P G A H + GA RGPPGP G +G Sbjct: 1207 PDGRALGHPQKGAKGEPGFRGPPGPYGRPGHKG 1239
>CO3A1_BOVIN (P04258) Collagen alpha-1(III) chain| Length = 1049 Score = 30.8 bits (68), Expect = 1.8 Identities = 16/48 (33%), Positives = 20/48 (41%) Frame = +1 Query: 256 PSGGWRADAAAGEHRPAGGACLHCRGGAHARSPLRGPPGPVGPKARRG 399 P G A GE GG G + + +GPPGP GP +G Sbjct: 427 PKGNDGAPGKNGERGGPGGPGPQGPAGKNGETGPQGPPGPTGPSGDKG 474 Score = 30.0 bits (66), Expect = 3.1 Identities = 16/37 (43%), Positives = 20/37 (54%) Frame = +1 Query: 289 GEHRPAGGACLHCRGGAHARSPLRGPPGPVGPKARRG 399 GE PAG + GA + RGPPGP GP+ +G Sbjct: 909 GETGPAGPS------GAPGPAGSRGPPGPQGPRGDKG 939
>PO2F3_HUMAN (Q9UKI9) POU domain, class 2, transcription factor 3| (Octamer-binding transcription factor 11) (Oct-11) (Transcription factor Skn-1) (PLA-1 protein) Length = 436 Score = 30.8 bits (68), Expect = 1.8 Identities = 15/32 (46%), Positives = 19/32 (59%) Frame = -2 Query: 462 GESLSTSSPTRSTQASTVARHASASFWSDGSW 367 G L SSPT S S A ++++SF S GSW Sbjct: 395 GSGLHASSPTASQNNSKAAVNSASSFNSSGSW 426
>CO2A1_BOVIN (P02459) Collagen alpha-1(II) chain precursor (Fragments)| Length = 747 Score = 30.8 bits (68), Expect = 1.8 Identities = 17/48 (35%), Positives = 18/48 (37%) Frame = +1 Query: 256 PSGGWRADAAAGEHRPAGGACLHCRGGAHARSPLRGPPGPVGPKARRG 399 P G AGE G L G + GPPGP GP RG Sbjct: 422 PKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERG 469 Score = 28.9 bits (63), Expect = 6.8 Identities = 17/39 (43%), Positives = 18/39 (46%) Frame = +1 Query: 283 AAGEHRPAGGACLHCRGGAHARSPLRGPPGPVGPKARRG 399 AAG PAG A GA S +G PGP GP G Sbjct: 455 AAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGG 493
>CO1A1_RAT (P02454) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 30.8 bits (68), Expect = 1.8 Identities = 19/48 (39%), Positives = 22/48 (45%) Frame = +1 Query: 256 PSGGWRADAAAGEHRPAGGACLHCRGGAHARSPLRGPPGPVGPKARRG 399 PSG A AG P G A G+ + L G PGP+GP RG Sbjct: 1120 PSG---ASGPAGPRGPPGSA------GSPGKDGLNGLPGPIGPPGPRG 1158 Score = 29.3 bits (64), Expect = 5.2 Identities = 17/50 (34%), Positives = 21/50 (42%) Frame = +1 Query: 250 SAPSGGWRADAAAGEHRPAGGACLHCRGGAHARSPLRGPPGPVGPKARRG 399 + P G A A G PAG + G + GP GP+GP RG Sbjct: 1031 AGPPGAPGAPGAPGPVGPAG------KNGDRGETGPAGPAGPIGPAGARG 1074
>CO1A1_MOUSE (P11087) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 30.8 bits (68), Expect = 1.8 Identities = 19/48 (39%), Positives = 22/48 (45%) Frame = +1 Query: 256 PSGGWRADAAAGEHRPAGGACLHCRGGAHARSPLRGPPGPVGPKARRG 399 PSG A AG P G A G+ + L G PGP+GP RG Sbjct: 1120 PSG---ASGPAGPRGPPGSA------GSPGKDGLNGLPGPIGPPGPRG 1158 Score = 29.3 bits (64), Expect = 5.2 Identities = 17/50 (34%), Positives = 21/50 (42%) Frame = +1 Query: 250 SAPSGGWRADAAAGEHRPAGGACLHCRGGAHARSPLRGPPGPVGPKARRG 399 + P G A A G PAG + G + GP GP+GP RG Sbjct: 1031 AGPPGAPGAPGAPGPVGPAG------KNGDRGETGPAGPAGPIGPAGARG 1074
>CO9A3_HUMAN (Q14050) Collagen alpha-3(IX) chain precursor| Length = 684 Score = 30.8 bits (68), Expect = 1.8 Identities = 17/41 (41%), Positives = 19/41 (46%) Frame = +1 Query: 277 DAAAGEHRPAGGACLHCRGGAHARSPLRGPPGPVGPKARRG 399 D G+ P G A L G LRG PGP+GP RG Sbjct: 207 DGEKGDPGPPGPAGLPGSVGLQGPRGLRGLPGPLGPPGDRG 247 Score = 30.8 bits (68), Expect = 1.8 Identities = 17/39 (43%), Positives = 17/39 (43%) Frame = +1 Query: 286 AGEHRPAGGACLHCRGGAHARSPLRGPPGPVGPKARRGV 402 AG P GG L G L GPPGP GP GV Sbjct: 126 AGVSGPPGGIGLRGPPGPSGLPGLPGPPGPPGPPGHPGV 164
>YL61_SCHPO (Q8TFG9) Hypothetical serine/threonine-rich protein PB15E9.01c| precursor Length = 943 Score = 30.8 bits (68), Expect = 1.8 Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 5/90 (5%) Frame = -2 Query: 456 SLSTSSPTRSTQASTVARHASASFWSDGSWRTSERRPCVRTASTMEASSSGWTV-----L 292 ++S+S+P S+ ++T A ASA+ S + TS P +ST +S++ T Sbjct: 248 TVSSSTPLTSSNSTTAATSASATS-SSAQYNTSSLLPSSTPSSTPLSSANSTTATSASST 306 Query: 291 PGCGIRSPTTTRSRRGLSQLSFTSARKPTA 202 P + S TTT S S +SA TA Sbjct: 307 PLTSVNS-TTTTSASSTPLSSVSSANSTTA 335
>CO1A1_BOVIN (P02453) Collagen alpha-1(I) chain (Fragments)| Length = 779 Score = 30.8 bits (68), Expect = 1.8 Identities = 19/48 (39%), Positives = 22/48 (45%) Frame = +1 Query: 256 PSGGWRADAAAGEHRPAGGACLHCRGGAHARSPLRGPPGPVGPKARRG 399 PSG A AG P G A G+ + L G PGP+GP RG Sbjct: 693 PSG---ASGPAGPRGPPGSA------GSPGKDGLNGLPGPIGPPGPRG 731 Score = 29.6 bits (65), Expect = 4.0 Identities = 16/48 (33%), Positives = 18/48 (37%) Frame = +1 Query: 256 PSGGWRADAAAGEHRPAGGACLHCRGGAHARSPLRGPPGPVGPKARRG 399 P G AGE G G + +GPPGP GP RG Sbjct: 150 PKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERG 197
>PARB_PSEPU (P0A152) Probable chromosome partitioning protein parB| Length = 290 Score = 30.8 bits (68), Expect = 1.8 Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 6/61 (9%) Frame = +2 Query: 284 QPGSTVQPEELASIVEAVRTHGLLSEVLQDPSDQKLAE------AWRATVDA*VERVGEL 445 QP + PE L + ++R HG++ ++ P E WRAT A ++ + + Sbjct: 50 QPRRDMDPEALEELAHSIRNHGVMQPIVVRPIGDNRYEIIAGERRWRATQQAGLDTIPAM 109 Query: 446 V 448 V Sbjct: 110 V 110
>PARB_PSEPK (P0A151) Probable chromosome partitioning protein parB| Length = 290 Score = 30.8 bits (68), Expect = 1.8 Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 6/61 (9%) Frame = +2 Query: 284 QPGSTVQPEELASIVEAVRTHGLLSEVLQDPSDQKLAE------AWRATVDA*VERVGEL 445 QP + PE L + ++R HG++ ++ P E WRAT A ++ + + Sbjct: 50 QPRRDMDPEALEELAHSIRNHGVMQPIVVRPIGDNRYEIIAGERRWRATQQAGLDTIPAM 109 Query: 446 V 448 V Sbjct: 110 V 110
>CO1A1_CANFA (Q9XSJ7) Collagen alpha-1(I) chain precursor| Length = 1460 Score = 30.8 bits (68), Expect = 1.8 Identities = 19/48 (39%), Positives = 22/48 (45%) Frame = +1 Query: 256 PSGGWRADAAAGEHRPAGGACLHCRGGAHARSPLRGPPGPVGPKARRG 399 PSG A AG P G A G+ + L G PGP+GP RG Sbjct: 1127 PSG---ASGPAGPRGPPGSA------GSPGKDGLNGLPGPIGPPGPRG 1165 Score = 29.6 bits (65), Expect = 4.0 Identities = 16/48 (33%), Positives = 18/48 (37%) Frame = +1 Query: 256 PSGGWRADAAAGEHRPAGGACLHCRGGAHARSPLRGPPGPVGPKARRG 399 P G AGE G G + +GPPGP GP RG Sbjct: 581 PKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERG 628
>COKA1_HUMAN (Q9P218) Collagen alpha-1(XX) chain precursor| Length = 1329 Score = 30.4 bits (67), Expect = 2.3 Identities = 18/48 (37%), Positives = 19/48 (39%) Frame = +1 Query: 256 PSGGWRADAAAGEHRPAGGACLHCRGGAHARSPLRGPPGPVGPKARRG 399 P G + AG P G GA S RGPPG VGP G Sbjct: 1172 PKGMRGLEGTAGLPGPPGPRGFQGMAGARGTSGERGPPGTVGPTGLPG 1219
>SGS3_DROYA (P13728) Salivary glue protein Sgs-3 precursor| Length = 263 Score = 30.4 bits (67), Expect = 2.3 Identities = 19/81 (23%), Positives = 37/81 (45%) Frame = -2 Query: 447 TSSPTRSTQASTVARHASASFWSDGSWRTSERRPCVRTASTMEASSSGWTVLPGCGIRSP 268 T+ + + + +T R + + + T+ RRP R+ +T +++ T R P Sbjct: 76 TTEKSTTRRTTTTTRQTTTRPTTTTTTTTTTRRPTTRSTTTRHTTTTTTTT------RRP 129 Query: 267 TTTRSRRGLSQLSFTSARKPT 205 TTT + + T+ R+PT Sbjct: 130 TTTTTTTRRPTTTTTTTRRPT 150
>BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2157 Score = 30.4 bits (67), Expect = 2.3 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 3/45 (6%) Frame = +1 Query: 250 SAPSGGWRADAAAGEHRPAGGACLH---CRGGAHARSPLRGPPGP 375 S+P GG + A RP G + L+ C G + P R PP P Sbjct: 1670 SSPDGGLKGAAEGPPKRPGGSSPLNAVPCEGPPGSEPPRRPPPAP 1714
>YQ33_CAEEL (Q09233) Putative cuticle collagen C09G5.3| Length = 283 Score = 30.0 bits (66), Expect = 3.1 Identities = 15/41 (36%), Positives = 19/41 (46%) Frame = +1 Query: 277 DAAAGEHRPAGGACLHCRGGAHARSPLRGPPGPVGPKARRG 399 + A +PA G C+ C G RGPPGP G + G Sbjct: 120 NGGAALDQPADGTCIKCPPGP------RGPPGPQGEEGPSG 154
>COL6_CAEEL (P18831) Cuticle collagen 6 (Protein roller-8)| Length = 329 Score = 30.0 bits (66), Expect = 3.1 Identities = 14/33 (42%), Positives = 15/33 (45%) Frame = +1 Query: 301 PAGGACLHCRGGAHARSPLRGPPGPVGPKARRG 399 PA C+ C GA GP GP GPK G Sbjct: 178 PASEPCIICPTGAPGPMGAMGPKGPPGPKGSPG 210
>CO1A2_CANFA (O46392) Collagen alpha-2(I) chain precursor| Length = 1366 Score = 30.0 bits (66), Expect = 3.1 Identities = 16/47 (34%), Positives = 21/47 (44%) Frame = +1 Query: 259 SGGWRADAAAGEHRPAGGACLHCRGGAHARSPLRGPPGPVGPKARRG 399 +G A GE PAG G + +GPPGP G + +RG Sbjct: 336 AGATGARGIVGEPGPAGSKGESGNKGEPGSAGAQGPPGPSGEEGKRG 382 Score = 29.3 bits (64), Expect = 5.2 Identities = 16/50 (32%), Positives = 21/50 (42%) Frame = +1 Query: 250 SAPSGGWRADAAAGEHRPAGGACLHCRGGAHARSPLRGPPGPVGPKARRG 399 + PSG D G+ G A + G+ + GPPGP GP G Sbjct: 1056 AGPSGPAGKDGRTGQPGTVGPAGIRGSQGSQGPAGPPGPPGPPGPPGPSG 1105
>COBA1_HUMAN (P12107) Collagen alpha-1(XI) chain precursor| Length = 1806 Score = 24.3 bits (51), Expect(2) = 3.7 Identities = 8/13 (61%), Positives = 10/13 (76%) Frame = +1 Query: 361 GPPGPVGPKARRG 399 GPPGP GP+ +G Sbjct: 1219 GPPGPPGPRGPQG 1231 Score = 23.9 bits (50), Expect(2) = 3.7 Identities = 11/31 (35%), Positives = 14/31 (45%) Frame = +1 Query: 289 GEHRPAGGACLHCRGGAHARSPLRGPPGPVG 381 GE P G + + G GPPGP+G Sbjct: 1168 GEPGPRGQQGMFGQKGDEGARGFPGPPGPIG 1198
>CO7A1_HUMAN (Q02388) Collagen alpha-1(VII) chain precursor (Long-chain collagen)| (LC collagen) Length = 2944 Score = 29.6 bits (65), Expect = 4.0 Identities = 15/37 (40%), Positives = 17/37 (45%) Frame = +1 Query: 289 GEHRPAGGACLHCRGGAHARSPLRGPPGPVGPKARRG 399 GE P G A G R +GP GP GP R+G Sbjct: 1495 GERGPPGPAGSRGLPGVAGRPGAKGPEGPPGPTGRQG 1531
>COIA1_HUMAN (P39060) Collagen alpha-1(XVIII) chain precursor [Contains:| Endostatin] Length = 1516 Score = 29.6 bits (65), Expect = 4.0 Identities = 14/33 (42%), Positives = 16/33 (48%) Frame = +1 Query: 301 PAGGACLHCRGGAHARSPLRGPPGPVGPKARRG 399 P GGA + GA RGPPGP G +G Sbjct: 951 PDGGALGPAQKGAKGEPGFRGPPGPYGRPGYKG 983 Score = 29.3 bits (64), Expect = 5.2 Identities = 18/46 (39%), Positives = 20/46 (43%) Frame = +1 Query: 265 GWRADAAAGEHRPAGGACLHCRGGAHARSPLRGPPGPVGPKARRGV 402 G R DA R G GG S L GPPGP GP+ G+ Sbjct: 1093 GDRGDAGQKGERGEPG------GGGFFGSSLPGPPGPPGPRGYPGI 1132
>LIPA_STRCO (Q9S2P2) Lipoyl synthase (EC 2.8.1.-) (Lipoic acid synthase)| (Lipoate synthase) (Lipoyl-acyl-carrier protein synthase) (Sulfur insertion protein lipA) (Lip-syn) Length = 317 Score = 29.6 bits (65), Expect = 4.0 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%) Frame = -1 Query: 277 PLANHHSEQTWLKP-AVVHVREEADGAGHRWLVRGP 173 P HH + W+KP V ++EEA+ G ++ GP Sbjct: 258 PSVRHHPVERWVKPQEFVELKEEAEQIGFSGVMSGP 293
>LIPA_STRAW (Q82AP7) Lipoyl synthase (EC 2.8.1.-) (Lipoic acid synthase)| (Lipoate synthase) (Lipoyl-acyl-carrier protein synthase) (Sulfur insertion protein lipA) (Lip-syn) Length = 328 Score = 29.6 bits (65), Expect = 4.0 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%) Frame = -1 Query: 277 PLANHHSEQTWLKP-AVVHVREEADGAGHRWLVRGP 173 P HH + W+KP V ++EEA+ G ++ GP Sbjct: 258 PSVRHHPVERWVKPHEFVELKEEAEEIGFSGVMSGP 293
>COGA1_HUMAN (Q07092) Collagen alpha-1(XVI) chain precursor| Length = 1603 Score = 29.6 bits (65), Expect = 4.0 Identities = 15/37 (40%), Positives = 16/37 (43%) Frame = +1 Query: 289 GEHRPAGGACLHCRGGAHARSPLRGPPGPVGPKARRG 399 GE G A G L GPPGP GP+ RG Sbjct: 1104 GERGYTGSAGEKGEPGPPGSEGLPGPPGPAGPRGERG 1140
>CO1A2_HUMAN (P08123) Collagen alpha-2(I) chain precursor| Length = 1366 Score = 29.6 bits (65), Expect = 4.0 Identities = 17/42 (40%), Positives = 18/42 (42%) Frame = +1 Query: 274 ADAAAGEHRPAGGACLHCRGGAHARSPLRGPPGPVGPKARRG 399 A A G H P G A H G S GP G VGP+ G Sbjct: 959 AAGAPGPHGPVGPAGKHGNRGETGPSGPVGPAGAVGPRGPSG 1000 Score = 29.3 bits (64), Expect = 5.2 Identities = 16/47 (34%), Positives = 21/47 (44%) Frame = +1 Query: 259 SGGWRADAAAGEHRPAGGACLHCRGGAHARSPLRGPPGPVGPKARRG 399 +G A GE PAG G + +GPPGP G + +RG Sbjct: 336 AGATGARGLVGEPGPAGSKGESGNKGEPGSAGPQGPPGPSGEEGKRG 382
>CO3A1_HUMAN (P02461) Collagen alpha-1(III) chain precursor| Length = 1466 Score = 29.3 bits (64), Expect = 5.2 Identities = 16/48 (33%), Positives = 20/48 (41%) Frame = +1 Query: 256 PSGGWRADAAAGEHRPAGGACLHCRGGAHARSPLRGPPGPVGPKARRG 399 P G A GE GG G + + +GPPGP GP +G Sbjct: 583 PKGNDGAPGKNGERGGPGGPGPQGPPGKNGETGPQGPPGPTGPGGDKG 630 Score = 28.5 bits (62), Expect = 8.9 Identities = 16/37 (43%), Positives = 19/37 (51%) Frame = +1 Query: 289 GEHRPAGGACLHCRGGAHARSPLRGPPGPVGPKARRG 399 GE PAG A GA + RG PGP GP+ +G Sbjct: 1065 GESGPAGPA------GAPGPAGSRGAPGPQGPRGDKG 1095
>MYSC_ACACA (P10569) Myosin IC heavy chain| Length = 1168 Score = 29.3 bits (64), Expect = 5.2 Identities = 17/47 (36%), Positives = 18/47 (38%) Frame = +1 Query: 244 ATSAPSGGWRADAAAGEHRPAGGACLHCRGGAHARSPLRGPPGPVGP 384 A P G AG P GG + GGA R PPG GP Sbjct: 1075 APGGPGRGGAPPPGAGRAGPPGGRGMPAPGGAAPRGRGAPPPGAGGP 1121
>CO1A2_ONCMY (O93484) Collagen alpha-2(I) chain precursor| Length = 1356 Score = 29.3 bits (64), Expect = 5.2 Identities = 16/50 (32%), Positives = 20/50 (40%) Frame = +1 Query: 250 SAPSGGWRADAAAGEHRPAGGACLHCRGGAHARSPLRGPPGPVGPKARRG 399 + P+G GE P G GG RG PGP GP+ +G Sbjct: 960 NGPAGSAGRPGNRGESGPTGN------GGPVGAVGARGAPGPAGPRGEKG 1003
>CO4A2_HUMAN (P08572) Collagen alpha-2(IV) chain precursor| Length = 1712 Score = 29.3 bits (64), Expect = 5.2 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 5/39 (12%) Frame = +1 Query: 298 RPAGGACLHCRGGAHARSP-----LRGPPGPVGPKARRG 399 RP C +G + + P GPPGP GPK ++G Sbjct: 131 RPGYDGCNGTQGDSGPQGPPGSEGFTGPPGPQGPKGQKG 169 Score = 28.5 bits (62), Expect = 8.9 Identities = 12/26 (46%), Positives = 13/26 (50%) Frame = +1 Query: 325 CRGGAHARSPLRGPPGPVGPKARRGV 402 C G L GPPGP G K RG+ Sbjct: 681 CIAGPKGLPGLPGPPGPTGAKGLRGI 706
>YBL2_STRCI (P33654) Hypothetical 14.2 kDa protein in blaB 3'region| Length = 132 Score = 29.3 bits (64), Expect = 5.2 Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 11/90 (12%) Frame = -2 Query: 447 TSSPTRSTQASTVARHASASFWSDGSWRT-------SERRPCVRTASTMEASSSGWTVLP 289 TS T S++A +SAS W+ +W+T + R R+ ++M ++SS + P Sbjct: 38 TSFVTSVPATSSIANGSSASSWAIRAWKTTWSRTSPNSSRSSPRSPASMASTSSYISSTP 97 Query: 288 ----GCGIRSPTTTRSRRGLSQLSFTSARK 211 +R +RR S S TS+R+ Sbjct: 98 YLTRSWWVRRALHGHARRIRSMTSTTSSRR 127
>CO3A1_RAT (P13941) Collagen alpha-1(III) chain precursor| Length = 1463 Score = 29.3 bits (64), Expect = 5.2 Identities = 16/48 (33%), Positives = 20/48 (41%) Frame = +1 Query: 256 PSGGWRADAAAGEHRPAGGACLHCRGGAHARSPLRGPPGPVGPKARRG 399 P G A GE GG L G + + +GPPGP G +G Sbjct: 582 PKGNDGAPGKNGERGGPGGPGLPGPAGKNGETGPQGPPGPTGAPGDKG 629
>TNR19_MOUSE (Q9JLL3) Tumor necrosis factor receptor superfamily member 19| precursor (Toxicity and JNK inducer) (TRADE) Length = 416 Score = 29.3 bits (64), Expect = 5.2 Identities = 16/28 (57%), Positives = 18/28 (64%) Frame = -2 Query: 321 EASSSGWTVLPGCGIRSPTTTRSRRGLS 238 EA SS VL GCG+RSPTT + R S Sbjct: 258 EARSSARAVL-GCGLRSPTTLQERNPAS 284
>MEGF6_MOUSE (Q80V70) Multiple epidermal growth factor-like domains 6 (EGF-like| domain-containing protein 3) (Multiple EGF-like domain protein 3) (Fragment) Length = 656 Score = 29.3 bits (64), Expect = 5.2 Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 1/41 (2%) Frame = +1 Query: 265 GWRADAAAGE-HRPAGGACLHCRGGAHARSPLRGPPGPVGP 384 GW +A A H P G +C H G H PPG GP Sbjct: 251 GWFGEACAQRCHCPPGASCHHVSGECHC------PPGFTGP 285
>COBA2_MOUSE (Q64739) Collagen alpha-2(XI) chain precursor| Length = 1736 Score = 25.0 bits (53), Expect(2) = 6.0 Identities = 14/41 (34%), Positives = 16/41 (39%) Frame = +1 Query: 259 SGGWRADAAAGEHRPAGGACLHCRGGAHARSPLRGPPGPVG 381 SG G H P G L G + +GPPGP G Sbjct: 858 SGAKGTSGGDGPHGPPGERGLPGPQGPNGFPGPKGPPGPAG 898 Score = 22.3 bits (46), Expect(2) = 6.0 Identities = 8/13 (61%), Positives = 9/13 (69%) Frame = +1 Query: 361 GPPGPVGPKARRG 399 GPPG VGP+ G Sbjct: 922 GPPGVVGPQGTAG 934
>CO1A2_BOVIN (P02465) Collagen alpha-2(I) chain precursor| Length = 1364 Score = 28.9 bits (63), Expect = 6.8 Identities = 16/50 (32%), Positives = 21/50 (42%) Frame = +1 Query: 250 SAPSGGWRADAAAGEHRPAGGACLHCRGGAHARSPLRGPPGPVGPKARRG 399 + PSG D G+ G A + G+ + GPPGP GP G Sbjct: 1054 AGPSGPAGKDGRIGQPGAVGPAGIRGSQGSQGPAGPPGPPGPPGPPGPSG 1103
>CO9A1_MOUSE (Q05722) Collagen alpha-1(IX) chain precursor| Length = 921 Score = 28.9 bits (63), Expect = 6.8 Identities = 15/43 (34%), Positives = 21/43 (48%) Frame = +1 Query: 274 ADAAAGEHRPAGGACLHCRGGAHARSPLRGPPGPVGPKARRGV 402 A AGE G + G+ + +GPPG VGP+ RG+ Sbjct: 581 AKGVAGEKGNTGAPGKPGQLGSSGKPGQQGPPGEVGPRGPRGL 623 Score = 28.5 bits (62), Expect = 8.9 Identities = 12/23 (52%), Positives = 13/23 (56%) Frame = +1 Query: 334 GAHARSPLRGPPGPVGPKARRGV 402 GA RGPPG GPK RG+ Sbjct: 499 GAAGDQGQRGPPGETGPKGDRGI 521
>CO1A2_RABIT (Q28668) Collagen alpha-2(I) chain precursor (Fragment)| Length = 526 Score = 28.9 bits (63), Expect = 6.8 Identities = 16/50 (32%), Positives = 21/50 (42%) Frame = +1 Query: 250 SAPSGGWRADAAAGEHRPAGGACLHCRGGAHARSPLRGPPGPVGPKARRG 399 + P+G D +G G A L G+ + GPPGP GP G Sbjct: 216 AGPTGPAGKDGRSGHPGTVGPAGLRGSQGSQGPAGPPGPPGPPGPPGASG 265
>COHA1_MOUSE (Q07563) Collagen alpha-1(XVII) chain (Bullous pemphigoid antigen| 2) (180 kDa bullous pemphigoid antigen 2) Length = 1470 Score = 28.9 bits (63), Expect = 6.8 Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 4/52 (7%) Frame = +1 Query: 256 PSGGWRADAA-AGEHRPAGGACLHCRGG--AHARSP-LRGPPGPVGPKARRG 399 P G + D AGE P G + G H+ SP +GPPG VGP+ RG Sbjct: 645 PGSGEKGDRGIAGEQGPQGLPGVPGPPGLRGHSGSPGPQGPPGAVGPQGLRG 696
>CO5A2_HUMAN (P05997) Collagen alpha-2(V) chain precursor| Length = 1496 Score = 28.9 bits (63), Expect = 6.8 Identities = 10/14 (71%), Positives = 11/14 (78%) Frame = +1 Query: 358 RGPPGPVGPKARRG 399 RGPPGPVGP + G Sbjct: 1172 RGPPGPVGPSGKEG 1185
>COFA1_HUMAN (P39059) Collagen alpha-1(XV) chain precursor [Contains: Endostatin| (Endostatin-XV) (Restin) (Related to endostatin)] Length = 1388 Score = 28.9 bits (63), Expect = 6.8 Identities = 16/46 (34%), Positives = 19/46 (41%) Frame = +1 Query: 265 GWRADAAAGEHRPAGGACLHCRGGAHARSPLRGPPGPVGPKARRGV 402 GW +D +G G L LRGPPGP GP G+ Sbjct: 598 GWGSDVGSGSGDLVGSEQL-----------LRGPPGPPGPPGLPGI 632
>AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor| Length = 725 Score = 28.9 bits (63), Expect = 6.8 Identities = 23/84 (27%), Positives = 36/84 (42%) Frame = -2 Query: 456 SLSTSSPTRSTQASTVARHASASFWSDGSWRTSERRPCVRTASTMEASSSGWTVLPGCGI 277 S STS + ST +S + +S++ S S TS +ST +SSS T Sbjct: 223 STSTSPSSTSTSSSLTSTSSSSTSTSQSSTSTSSSSTSTSPSSTSTSSSSTSTSPSSKST 282 Query: 276 RSPTTTRSRRGLSQLSFTSARKPT 205 + +T+ S S ++ PT Sbjct: 283 SASSTSTSSYSTSTSPSLTSSSPT 306
>CO1A2_CHICK (P02467) Collagen alpha-2(I) chain precursor (Fragments)| Length = 1362 Score = 28.9 bits (63), Expect = 6.8 Identities = 19/48 (39%), Positives = 20/48 (41%) Frame = +1 Query: 256 PSGGWRADAAAGEHRPAGGACLHCRGGAHARSPLRGPPGPVGPKARRG 399 P+GG G PAG A GA RG PGPVGP G Sbjct: 684 PAGGAGDRGEGGPAGPAGPA------GARGIPGERGEPGPVGPSGFAG 725 Score = 28.5 bits (62), Expect = 8.9 Identities = 17/48 (35%), Positives = 20/48 (41%) Frame = +1 Query: 256 PSGGWRADAAAGEHRPAGGACLHCRGGAHARSPLRGPPGPVGPKARRG 399 PSG D G P G A + G+ + GPPGP GP G Sbjct: 1056 PSGPPGKDGRNGLPGPIGPAGVRGSHGSQGPAGPPGPPGPPGPPGPNG 1103 Score = 28.5 bits (62), Expect = 8.9 Identities = 17/48 (35%), Positives = 18/48 (37%) Frame = +1 Query: 256 PSGGWRADAAAGEHRPAGGACLHCRGGAHARSPLRGPPGPVGPKARRG 399 P+G A GE PAG G GPPGP GP G Sbjct: 333 PAGPSGARGLVGEPGPAGAKG---ESGNKGEPGAAGPPGPPGPSGEEG 377
>COCA1_CHICK (P13944) Collagen alpha-1(XII) chain precursor (Fibrochimerin)| Length = 3124 Score = 28.5 bits (62), Expect = 8.9 Identities = 11/15 (73%), Positives = 11/15 (73%) Frame = +1 Query: 355 LRGPPGPVGPKARRG 399 L GPPGPVGP RG Sbjct: 2832 LPGPPGPVGPPGERG 2846
>CO8A2_HUMAN (P25067) Collagen alpha-2(VIII) chain precursor (Endothelial| collagen) Length = 703 Score = 28.5 bits (62), Expect = 8.9 Identities = 16/50 (32%), Positives = 19/50 (38%) Frame = +1 Query: 250 SAPSGGWRADAAAGEHRPAGGACLHCRGGAHARSPLRGPPGPVGPKARRG 399 + P G G+ P+G A G GPPGP GPK G Sbjct: 381 AGPGGPPGVPGIRGDQGPSGLAGKPGVPGERGLPGAHGPPGPTGPKGEPG 430
>CO5A3_HUMAN (P25940) Collagen alpha-3(V) chain precursor| Length = 1745 Score = 28.5 bits (62), Expect = 8.9 Identities = 17/49 (34%), Positives = 20/49 (40%) Frame = +1 Query: 256 PSGGWRADAAAGEHRPAGGACLHCRGGAHARSPLRGPPGPVGPKARRGV 402 PSG + GE G G RGPPG VGP+ RG+ Sbjct: 1314 PSGHMGREGREGEKGAKGEPGPDGPPGRTGPMGARGPPGRVGPEGLRGI 1362
>RL2_CLOPE (Q8XHS6) 50S ribosomal protein L2| Length = 277 Score = 28.5 bits (62), Expect = 8.9 Identities = 16/40 (40%), Positives = 17/40 (42%) Frame = +1 Query: 265 GWRADAAAGEHRPAGGACLHCRGGAHARSPLRGPPGPVGP 384 GWR P C H GG RSP+ G P PV P Sbjct: 215 GWRPTVRGSVMNP----CDHPHGGGEGRSPI-GRPSPVTP 249
>C1QRF_MOUSE (O88992) C1q-related factor precursor (Complement component 1 Q| subcomponent-like 1) Length = 258 Score = 28.5 bits (62), Expect = 8.9 Identities = 10/14 (71%), Positives = 11/14 (78%) Frame = +1 Query: 358 RGPPGPVGPKARRG 399 RGPPGPVGP +G Sbjct: 87 RGPPGPVGPPGEKG 100
>VNUA_PRVKA (P33485) Probable nuclear antigen| Length = 1733 Score = 28.5 bits (62), Expect = 8.9 Identities = 23/70 (32%), Positives = 24/70 (34%), Gaps = 25/70 (35%) Frame = +1 Query: 247 TSAPSGGWRADAAAGEHRPAGGA--------CLHC-----------------RGGAHARS 351 T+ PSGG A AA RP GG C C R G R Sbjct: 1581 TAVPSGGGGAAAAGRRDRPGGGGGWGSGPPPCRRCGHRCWLCWWRRGPRPRRRPGLTDRV 1640 Query: 352 PLRGPPGPVG 381 P RG P P G Sbjct: 1641 PPRGGPSPRG 1650
>COHA1_CANFA (Q9N281) Collagen alpha-1(XVII) chain (Bullous pemphigoid antigen| 2) (180 kDa bullous pemphigoid antigen 2) (Fragment) Length = 709 Score = 28.5 bits (62), Expect = 8.9 Identities = 10/14 (71%), Positives = 12/14 (85%) Frame = +1 Query: 358 RGPPGPVGPKARRG 399 RGPPGP+GP+ RG Sbjct: 677 RGPPGPMGPQGLRG 690
>CO4A1_MOUSE (P02463) Collagen alpha-1(IV) chain precursor| Length = 1669 Score = 28.5 bits (62), Expect = 8.9 Identities = 15/37 (40%), Positives = 17/37 (45%) Frame = +1 Query: 289 GEHRPAGGACLHCRGGAHARSPLRGPPGPVGPKARRG 399 G+ G +CL C LRGPPGP GP G Sbjct: 458 GQKGQKGESCLACD-----TEGLRGPPGPQGPPGEIG 489
>EMID1_HUMAN (Q96A84) EMI domain-containing protein 1 precursor (Protein Emu1)| (Emilin and multimerin domain-containing protein 1) Length = 441 Score = 28.5 bits (62), Expect = 8.9 Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 2/26 (7%) Frame = +1 Query: 328 RGGAHARSPL--RGPPGPVGPKARRG 399 +G A +R P+ RGPPGP GP G Sbjct: 208 KGDAGSRGPMGMRGPPGPQGPPGSPG 233
>CO9A1_CHICK (P12106) Collagen alpha-1(IX) chain precursor| Length = 920 Score = 28.5 bits (62), Expect = 8.9 Identities = 18/40 (45%), Positives = 18/40 (45%), Gaps = 3/40 (7%) Frame = +1 Query: 289 GEHRPAGGACLHC---RGGAHARSPLRGPPGPVGPKARRG 399 G PAG A L R G RGPPGP GP RG Sbjct: 359 GPPGPAGAAGLPGEVGRAGPPGDPGKRGPPGPPGPPGPRG 398
>COBA2_HUMAN (P13942) Collagen alpha-2(XI) chain precursor| Length = 1736 Score = 24.3 bits (51), Expect(2) = 9.9 Identities = 14/41 (34%), Positives = 16/41 (39%) Frame = +1 Query: 259 SGGWRADAAAGEHRPAGGACLHCRGGAHARSPLRGPPGPVG 381 SG G H P G L G + +GPPGP G Sbjct: 858 SGAKGTSGGDGPHGPPGERGLPGPQGPNGFPGPKGPPGPPG 898 Score = 22.3 bits (46), Expect(2) = 9.9 Identities = 8/13 (61%), Positives = 9/13 (69%) Frame = +1 Query: 361 GPPGPVGPKARRG 399 GPPG VGP+ G Sbjct: 922 GPPGVVGPQGAAG 934 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,452,762 Number of Sequences: 219361 Number of extensions: 1004426 Number of successful extensions: 6732 Number of sequences better than 10.0: 73 Number of HSP's better than 10.0 without gapping: 3822 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6307 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3014947676 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
