>PDC6I_XENLA (Q9W6C5) Programmed cell death 6-interacting protein (Signal|
           transduction protein Xp95)
          Length = 867

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 34/104 (32%), Positives = 49/104 (47%), Gaps = 4/104 (3%)
 Frame = +2

Query: 161 LAIHEKKAAAVDLYRPLRQYIASAYSERDAAT----ADDDLCAVRDLRAAAVESPCLPDS 328
           +++  KK + VDL +PL +YI + Y   +  T    A D+L     LR +AV  P     
Sbjct: 5   ISVPLKKTSEVDLVKPLSKYIHNTYPSGEDQTEYCRAVDEL---NKLRKSAVGRPLDKHE 61

Query: 329 SSLEQXXXXXXXXXXXXXXVEPRFPISPDRAHVHSLSFTWHDAF 460
           +SLE               VEP+FP +  +     L+FTW DAF
Sbjct: 62  TSLE----TVMRYYDQLCSVEPKFPFTESQL---CLTFTWKDAF 98

>PDC6I_HUMAN (Q8WUM4) Programmed cell death 6-interacting protein|
           (PDCD6-interacting protein) (ALG-2-interacting protein
           1) (Hp95)
          Length = 868

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 31/102 (30%), Positives = 45/102 (44%), Gaps = 2/102 (1%)
 Frame = +2

Query: 161 LAIHEKKAAAVDLYRPLRQYIASAYSERDAATADDDLCA--VRDLRAAAVESPCLPDSSS 334
           +++  KK + VDL +PL ++I   Y       A     A  +  LR AAV  P      +
Sbjct: 5   ISVQLKKTSEVDLAKPLVKFIQQTYPSGGEEQAQYCRAAEELSKLRRAAVGRPLDKHEGA 64

Query: 335 LEQXXXXXXXXXXXXXXVEPRFPISPDRAHVHSLSFTWHDAF 460
           LE               +EP+FP S ++     L+FTW DAF
Sbjct: 65  LE----TLLRYYDQICSIEPKFPFSENQI---CLTFTWKDAF 99

>PDC6I_MOUSE (Q9WU78) Programmed cell death 6-interacting protein|
           (ALG-2-interacting protein X) (ALG-2-interacting protein
           1) (E2F1-inducible protein) (Eig2)
          Length = 869

 Score = 36.2 bits (82), Expect = 0.043
 Identities = 29/97 (29%), Positives = 42/97 (43%), Gaps = 2/97 (2%)
 Frame = +2

Query: 176 KKAAAVDLYRPLRQYIASAYSERDAATADDDLCA--VRDLRAAAVESPCLPDSSSLEQXX 349
           KK + VDL +PL ++I   Y       A     A  +  LR +A+  P      +LE   
Sbjct: 10  KKTSEVDLAKPLVKFIQQTYPSGGEEQAQYCRAAEELSKLRRSALGRPLDKHEGALE--- 66

Query: 350 XXXXXXXXXXXXVEPRFPISPDRAHVHSLSFTWHDAF 460
                       +EP+FP S ++     L+FTW DAF
Sbjct: 67  -TLLRYYDQICSIEPKFPFSENQI---CLTFTWKDAF 99

>BRO1_GIBZE (Q4IBS9) Vacuolar protein-sorting protein BRO1 (BRO|
           domain-containing protein 1)
          Length = 995

 Score = 35.8 bits (81), Expect = 0.056
 Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 5/111 (4%)
 Frame = +2

Query: 143 MAANVMLAIHEKKAAAVDLYRPLRQYIASAYSERDAATADDDLCAV-----RDLRAAAVE 307
           MA + M+++  K    +D   PL++YI   Y +     A++  CA      +D+R A  +
Sbjct: 1   MAQSPMISVPLKATNEIDWVEPLKRYIRDTYGDDPERYAEE--CATLNRLRQDVRGAGKD 58

Query: 308 SPCLPDSSSLEQXXXXXXXXXXXXXXVEPRFPISPDRAHVHSLSFTWHDAF 460
           S    D                    ++ RFP+  D  H+  +SFTW DAF
Sbjct: 59  STSGRD---------MLYRYYGQLELLDLRFPV--DEQHI-KISFTWFDAF 97

>BRO1_ASPFU (Q4X0Z5) Vacuolar protein-sorting protein bro1 (BRO|
           domain-containing protein 1)
          Length = 976

 Score = 35.4 bits (80), Expect = 0.073
 Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 5/111 (4%)
 Frame = +2

Query: 143 MAANVMLAIHEKKAAAVDLYRPLRQYIASAYSERDAATADDDLCAV-----RDLRAAAVE 307
           M  + ML+   K+   +D  RPL+ YI  +Y E       +  CA      +D+R A  +
Sbjct: 1   MVQSPMLSCPLKQTNEIDWIRPLKDYIRQSYGEDPERYNQE--CATLNRLRQDMRGAGKD 58

Query: 308 SPCLPDSSSLEQXXXXXXXXXXXXXXVEPRFPISPDRAHVHSLSFTWHDAF 460
           S    D                    ++ RFP+  D  H+  +SFTW+DAF
Sbjct: 59  SATGRD---------LLYRYYGQLELLDLRFPV--DENHI-KISFTWYDAF 97

>BRO1_EMENI (Q6XPR4) Vacuolar protein-sorting protein bro1 (BRO|
           domain-containing protein 1)
          Length = 1000

 Score = 34.3 bits (77), Expect = 0.16
 Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 5/111 (4%)
 Frame = +2

Query: 143 MAANVMLAIHEKKAAAVDLYRPLRQYIASAYSERDAATADDDLCAV-----RDLRAAAVE 307
           M  + M++   K+   +D  +PL+ YI  +Y E     + +  CA      +D+R A  +
Sbjct: 1   MVQSPMISCPLKQTNEIDWIQPLKDYIRQSYGEDPERYSQE--CATLNRLRQDMRGAGKD 58

Query: 308 SPCLPDSSSLEQXXXXXXXXXXXXXXVEPRFPISPDRAHVHSLSFTWHDAF 460
           S    D                    ++ RFP+  D  H+  +SFTW+DAF
Sbjct: 59  SATGRD---------LLYRYYGQLELLDLRFPV--DENHI-KISFTWYDAF 97

>COE1_MOUSE (Q07802) Transcription factor COE1 (OE-1) (O/E-1) (Early B-cell|
           factor)
          Length = 591

 Score = 32.0 bits (71), Expect = 0.80
 Identities = 19/57 (33%), Positives = 29/57 (50%)
 Frame = +2

Query: 20  PNFLHVERSNLLYEATPRSNYPQPPTSIPSSAALPSGHRAPMAANVMLAIHEKKAAA 190
           P FL+   +N  Y   P S      TS+PS+ +  SG  +   AN++ A+ +K A A
Sbjct: 503 PTFLNGSAANSPYAIVPSSPTMASSTSLPSNCSSSSGIFSFSPANMVSAVKQKSAFA 559

>COE1_HUMAN (Q9UH73) Transcription factor COE1 (OE-1) (O/E-1) (Early B-cell|
           factor)
          Length = 591

 Score = 32.0 bits (71), Expect = 0.80
 Identities = 19/57 (33%), Positives = 29/57 (50%)
 Frame = +2

Query: 20  PNFLHVERSNLLYEATPRSNYPQPPTSIPSSAALPSGHRAPMAANVMLAIHEKKAAA 190
           P FL+   +N  Y   P S      TS+PS+ +  SG  +   AN++ A+ +K A A
Sbjct: 503 PTFLNGSAANSPYAIVPSSPTMASSTSLPSNCSSSSGIFSFSPANMVSAVKQKSAFA 559

>COE1_RAT (Q63398) Transcription factor COE1 (OE-1) (O/E-1) (Early B-cell|
           factor) (Olfactory neuronal transcription factor)
           (Olf-1)
          Length = 584

 Score = 32.0 bits (71), Expect = 0.80
 Identities = 19/57 (33%), Positives = 29/57 (50%)
 Frame = +2

Query: 20  PNFLHVERSNLLYEATPRSNYPQPPTSIPSSAALPSGHRAPMAANVMLAIHEKKAAA 190
           P FL+   +N  Y   P S      TS+PS+ +  SG  +   AN++ A+ +K A A
Sbjct: 496 PTFLNGSAANSPYAIVPSSPTMASSTSLPSNCSSSSGIFSFSPANMVSAVKQKSAFA 552

>BRO1_NEUCR (Q7SAN9) Vacuolar protein-sorting protein bro-1 (BRO|
           domain-containing protein 1)
          Length = 1012

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 5/106 (4%)
 Frame = +2

Query: 158 MLAIHEKKAAAVDLYRPLRQYIASAYSERDAATADDDLCAV-----RDLRAAAVESPCLP 322
           M+++  K  + +D   PL+ YI + Y +     A++  CA      +D+R A  +S    
Sbjct: 6   MISVPLKATSEIDWVAPLKNYIRNTYGDDPERYAEE--CATLNRLRQDMRGAGKDSTSGR 63

Query: 323 DSSSLEQXXXXXXXXXXXXXXVEPRFPISPDRAHVHSLSFTWHDAF 460
           D                    ++ RFP+  D  ++  +SFTW DAF
Sbjct: 64  D---------LLYRYYGQLELLDLRFPV--DEKNI-KISFTWFDAF 97

>SCRA_LIMPO (Q25390) Alpha-scruin|
          Length = 918

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
 Frame = +2

Query: 80  YPQPPTSIPSSAALPSGHRAPMAANVMLA--IHEKKAAAVDLYRPLRQYI 223
           Y + PTS PSS A P     P +        IHE+  AA  + R  R+YI
Sbjct: 396 YYEVPTSTPSSKAKPQPGSKPTSVKYKKQPDIHERNEAAKKVQRRWRRYI 445

>HAA1_YEAST (Q12753) Transcriptional activator HAA1|
          Length = 694

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
 Frame = +2

Query: 11  SICPNFLHVERSNLLYEATPRSNY--PQPPTSIPSSAALPSGHRAPMAANVMLA 166
           S+ P+F+ +       E +P SNY   +P T  P S+++   HR P  A   +A
Sbjct: 469 SLTPSFMDIPEKERETERSPSSNYITDRPFTRKPRSSSIDVNHRYPPMAPTTVA 522

>MUKF_VIBCH (Q9KRC6) Chromosome partition protein mukF|
          Length = 445

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 20/66 (30%)
 Frame = +2

Query: 158 MLAIHEKKAAAVDLYRPLRQYIAS--------------------AYSERDAATADDDLCA 277
           ML +H+++ AA+DL   LR Y+AS                     YSE D      D  A
Sbjct: 370 MLKVHKEQGAAIDLALVLRDYLASHPRTHHFDLARMVVDQAVRLGYSESDYRAIQPDWTA 429

Query: 278 VRDLRA 295
           + D  A
Sbjct: 430 INDFGA 435

>APSA_EMENI (Q00083) Anucleate primary sterigmata protein A|
          Length = 1676

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 23/87 (26%), Positives = 33/87 (37%)
 Frame = +2

Query: 65  TPRSNYPQPPTSIPSSAALPSGHRAPMAANVMLAIHEKKAAAVDLYRPLRQYIASAYSER 244
           TPR N+ +  T   S      GH   M  N+   IH +K   ++L R L++        R
Sbjct: 391 TPRHNHLETETLRSSL-----GHAHRMIQNLRSTIHREKTEKIELKRMLQEARDEVEQRR 445

Query: 245 DAATADDDLCAVRDLRAAAVESPCLPD 325
             + A +     R    A    P  PD
Sbjct: 446 RDSVAANGPTNKRQKTKAETRKPARPD 472

>BNC2_HUMAN (Q6ZN30) Zinc finger protein basonuclin-2|
          Length = 1099

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 9/68 (13%)
 Frame = +2

Query: 89  PPTSIPSSAALPSG---------HRAPMAANVMLAIHEKKAAAVDLYRPLRQYIASAYSE 241
           PPTS+P+S  +P+             P+   VM+A HE  A      +P +  +     +
Sbjct: 585 PPTSLPTSPIIPTSGTIEQHPPPPSEPVVPAVMMATHEPSADLAPKKKPRKSSMPVKIEK 644

Query: 242 RDAATADD 265
               TAD+
Sbjct: 645 EIIDTADE 652

>Y1998_MYCTU (Q10859) Hypothetical protein Rv1998c/MT2054|
          Length = 258

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 20/54 (37%), Positives = 24/54 (44%)
 Frame = +2

Query: 101 IPSSAALPSGHRAPMAANVMLAIHEKKAAAVDLYRPLRQYIASAYSERDAATAD 262
           + SS   P GHRA   AN+ LA     AA   L   +   I   YS+   A AD
Sbjct: 42  VSSSGGHPDGHRATRGANIALA-----AALAPLQCYVSVDIEDGYSDEPDAIAD 90

>SNX19_HUMAN (Q92543) Sorting nexin-19|
          Length = 992

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
 Frame = +2

Query: 83  PQPPTSIPSSAA---LPSGHRAPMAANVMLAIHEKKAAA 190
           P  PTS+P  A    LP G  +P+AA V L+  E + +A
Sbjct: 285 PSVPTSLPLIAEVEQLPEGRASPVAAPVFLSYSEPEGSA 323

>PALA_EMENI (P79020) pH-response regulator protein palA/RIM20|
          Length = 847

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 20/54 (37%), Positives = 30/54 (55%)
 Frame = +2

Query: 143 MAANVMLAIHEKKAAAVDLYRPLRQYIASAYSERDAATADDDLCAVRDLRAAAV 304
           MA+N+ L I  +++  V L   L QYI++ Y +R    A DDL  +  LR  A+
Sbjct: 1   MASNI-LQIPFRRSHTVSLSTALTQYISTKYDQRPDMFA-DDLLIIDRLRNEAI 52


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,665,288
Number of Sequences: 219361
Number of extensions: 447070
Number of successful extensions: 2031
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2022
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3014947676
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)