ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl03g07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_197157.1| Oryza sativa (japonica cultivar-group) putative... 285 6e-74
2gb|AC068950.11| Oryza sativa chromosome 10 BAC OSJNBa0041P03 gen... 285 6e-74
3dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 285 6e-74
4gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 285 6e-74
5dbj|AK103856.1| Oryza sativa (japonica cultivar-group) cDNA clon... 278 2e-71
6dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 84 5e-13
7dbj|AP005842.3| Oryza sativa (japonica cultivar-group) genomic D... 84 5e-13
8gb|AC137610.2| Oryza sativa (japonica cultivar-group) chromosome... 78 3e-11
9gb|AC130731.2| Oryza sativa (japonica cultivar-group) chromosome... 78 3e-11
10dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 78 3e-11
11gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 68 3e-08
12gb|AC107224.2| Oryza sativa (japonica cultivar-group) chromosome... 68 3e-08
13dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 68 3e-08
14gb|AC155101.19| Medicago truncatula clone mth2-139j13, complete ... 60 7e-06
15gb|AC108499.3| Oryza sativa (japonica cultivar-group) chromosome... 52 0.002
16emb|AJ490435.1|OSA490435 Oryza sativa z191a snoRNA 52 0.002
17ref|XM_466958.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.007
18gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 50 0.007
19dbj|AP005513.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
20dbj|AP004768.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
21dbj|AK060633.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.007
22emb|AL161535.2|ATCHRIV35 Arabidopsis thaliana DNA chromosome 4, ... 46 0.10
23emb|AL049751.1|ATF17N18 Arabidopsis thaliana DNA chromosome 4, B... 46 0.10
24dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 46 0.10
25emb|AL939116.1|SCO939116 Streptomyces coelicolor A3(2) complete ... 44 0.40
26emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB 44 0.40
27gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 44 0.40
28emb|BX933175.1| Gallus gallus finished cDNA, clone ChEST380k11 44 0.40
29dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 44 0.40
30dbj|AB020746.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 44 0.40
31emb|AJ240073.1|ATH240073 Arabidopsis thaliana mRNA for Z4 snoRNA 44 0.40
32emb|CR729955.2|CNS0GQ6H Tetraodon nigroviridis full-length cDNA 42 1.6
33emb|BX572598.1| Rhodopseudomonas palustris CGA009 complete genom... 42 1.6
34emb|AJ810091.1| Streptomyces fradiae p3 gene for serine protease 3 42 1.6
35gb|AF533768.1| Cercopithecine herpesvirus 1 strain E2490, comple... 42 1.6
36tpg|BK000869.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M266,... 42 1.6
37gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 42 1.6
38dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
39dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
40dbj|AP003349.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
41dbj|AP003316.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
42dbj|AB096160.1| Cercopithecine herpesvirus 1 DNA, UL region, com... 42 1.6
43emb|AL606990.3|OSJN00122 Oryza sativa genomic DNA, chromosome 4,... 42 1.6
44gb|AC152105.2| Ostreococcus sp. CCE9901 clone JGIACFB-9A3, compl... 40 6.3
45gb|DQ215235.1| Taeniopygia guttata clone 0058P0026C11 Nur77 down... 40 6.3
46ref|XM_465997.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.3
47ref|XM_450685.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.3
48ref|NM_196928.1| Oryza sativa (japonica cultivar-group) hypothet... 40 6.3
49gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 40 6.3
50ref|NM_193402.1| Oryza sativa (japonica cultivar-group), predic... 40 6.3
51gb|BT017923.1| Zea mays clone EL01N0519D06.c mRNA sequence 40 6.3
52gb|AY007685.2| Homo sapiens telomerase catalytic subunit (TERT) ... 40 6.3
53gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 40 6.3
54gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 6.3
55gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 40 6.3
56gb|AC124143.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
57gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 40 6.3
58gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 6.3
59gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 40 6.3
60emb|CR682939.2|CNS0FPWN Tetraodon nigroviridis full-length cDNA 40 6.3
61emb|AL354713.7| Human DNA sequence from clone RP11-498A13 on chr... 40 6.3
62emb|CR380959.1| Candida glabrata strain CBS138 chromosome M comp... 40 6.3
63emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 40 6.3
64emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 6.3
65gb|AC022457.8| Oryza sativa chromosome 10 BAC OSJNBa0006L06 geno... 40 6.3
66gb|CP000133.1| Rhizobium etli CFN 42, complete genome 40 6.3
67gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 6.3
68gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 40 6.3
69dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
70dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
71gb|AC114291.2| Homo sapiens chromosome 5 clone CTD-3080P12, comp... 40 6.3
72dbj|AP004258.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
73dbj|AP004225.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
74dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 6.3
75dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 40 6.3
76emb|AJ490438.1|OSA490438 Oryza sativa z191b snoRNA 40 6.3
77dbj|AP005580.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
78dbj|AP005872.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
79emb|Y13432.1|RMPRMNT40 Rhizobium meliloti plasmid pRmNT40 DNA 40 6.3
80dbj|AP004460.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
81dbj|AK108440.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
82emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 6.3
83gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 40 6.3
84gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 6.3
85gb|DQ264729.1| Homo sapiens telomerase reverse transcriptase (TE... 40 6.3
86emb|AL136374.4| Human DNA sequence from clone RP1-244G5 on chrom... 40 6.3 
>ref|NM_197157.1| Oryza sativa (japonica cultivar-group) putative signal tranduction
           protein (OSJNBa0041P03.2), mRNA
          Length = 2871

 Score =  285 bits (144), Expect = 6e-74
 Identities = 278/322 (86%), Gaps = 3/322 (0%)
 Strand = Plus / Plus

                                                                       
Query: 145 ggcggccaacgtcatgctggcgatccacgagaagaaggccgcggccgtcgacctctaccg 204
           |||||| ||||| |||||||||||||||||||||| | || |  ||  ||||||||||||
Sbjct: 9   ggcggcgaacgtgatgctggcgatccacgagaagaggaccacccccaccgacctctaccg 68

                                                                       
Query: 205 cccgctccgccagtacatcgcctccgcctactcggagcgcgacgcggccaccgccgacga 264
           |||||||||||  |||||||||||||||||||||||||| || |||||| | ||||||||
Sbjct: 69  cccgctccgcctctacatcgcctccgcctactcggagcgggaggcggccgcggccgacga 128

                                                                       
Query: 265 cgacctctgcgccgtgcgcgacctccgcgccgcggccgtcgagagcccctgcctcccgga 324
           |||||||  ||| ||||||||||| |||||||    |||||||   || |  ||||||||
Sbjct: 129 cgacctcgccgcggtgcgcgacctgcgcgccga---cgtcgagcagccgtcgctcccgga 185

                                                                       
Query: 325 ctcctcctccctcgagcagcgccgcgccgcgctcctggcctacgcccgcgcgctcgccct 384
           | | |||||||||||||   | || | ||||||||| |||||||| ||||| ||  ||||
Sbjct: 186 cccgtcctccctcgagcgaaggcgggacgcgctcctcgcctacgcgcgcgccctgtccct 245

                                                                       
Query: 385 cgtcgagccccgcttccccatctcccccgaccgcgcccacgtccactccctctccttcac 444
           ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 246 cgtcgagccccgcttccccatctcctccgaccgcgcccacgtccactccctcgccttcac 305

                                 
Query: 445 ctggcacgacgccttcaagacc 466
           ||||||||||||||||||||||
Sbjct: 306 ctggcacgacgccttcaagacc 327
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>gb|AC068950.11| Oryza sativa chromosome 10 BAC OSJNBa0041P03 genomic sequence, complete
             sequence
          Length = 139614

 Score =  285 bits (144), Expect = 6e-74
 Identities = 278/322 (86%), Gaps = 3/322 (0%)
 Strand = Plus / Plus

                                                                         
Query: 145   ggcggccaacgtcatgctggcgatccacgagaagaaggccgcggccgtcgacctctaccg 204
             |||||| ||||| |||||||||||||||||||||| | || |  ||  ||||||||||||
Sbjct: 23276 ggcggcgaacgtgatgctggcgatccacgagaagaggaccacccccaccgacctctaccg 23335

                                                                         
Query: 205   cccgctccgccagtacatcgcctccgcctactcggagcgcgacgcggccaccgccgacga 264
             |||||||||||  |||||||||||||||||||||||||| || |||||| | ||||||||
Sbjct: 23336 cccgctccgcctctacatcgcctccgcctactcggagcgggaggcggccgcggccgacga 23395

                                                                         
Query: 265   cgacctctgcgccgtgcgcgacctccgcgccgcggccgtcgagagcccctgcctcccgga 324
             |||||||  ||| ||||||||||| |||||||    |||||||   || |  ||||||||
Sbjct: 23396 cgacctcgccgcggtgcgcgacctgcgcgccga---cgtcgagcagccgtcgctcccgga 23452

                                                                         
Query: 325   ctcctcctccctcgagcagcgccgcgccgcgctcctggcctacgcccgcgcgctcgccct 384
             | | |||||||||||||   | || | ||||||||| |||||||| ||||| ||  ||||
Sbjct: 23453 cccgtcctccctcgagcgaaggcgggacgcgctcctcgcctacgcgcgcgccctgtccct 23512

                                                                         
Query: 385   cgtcgagccccgcttccccatctcccccgaccgcgcccacgtccactccctctccttcac 444
             ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 23513 cgtcgagccccgcttccccatctcctccgaccgcgcccacgtccactccctcgccttcac 23572

                                   
Query: 445   ctggcacgacgccttcaagacc 466
             ||||||||||||||||||||||
Sbjct: 23573 ctggcacgacgccttcaagacc 23594
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  285 bits (144), Expect = 6e-74
 Identities = 278/322 (86%), Gaps = 3/322 (0%)
 Strand = Plus / Minus

                                                                            
Query: 145      ggcggccaacgtcatgctggcgatccacgagaagaaggccgcggccgtcgacctctaccg 204
                |||||| ||||| |||||||||||||||||||||| | || |  ||  ||||||||||||
Sbjct: 18327494 ggcggcgaacgtgatgctggcgatccacgagaagaggaccacccccaccgacctctaccg 18327435

                                                                            
Query: 205      cccgctccgccagtacatcgcctccgcctactcggagcgcgacgcggccaccgccgacga 264
                |||||||||||  |||||||||||||||||||||||||| || |||||| | ||||||||
Sbjct: 18327434 cccgctccgcctctacatcgcctccgcctactcggagcgggaggcggccgcggccgacga 18327375

                                                                            
Query: 265      cgacctctgcgccgtgcgcgacctccgcgccgcggccgtcgagagcccctgcctcccgga 324
                |||||||  ||| ||||||||||| |||||||    |||||||   || |  ||||||||
Sbjct: 18327374 cgacctcgccgcggtgcgcgacctgcgcgccga---cgtcgagcagccgtcgctcccgga 18327318

                                                                            
Query: 325      ctcctcctccctcgagcagcgccgcgccgcgctcctggcctacgcccgcgcgctcgccct 384
                | | |||||||||||||   | || | ||||||||| |||||||| ||||| ||  ||||
Sbjct: 18327317 cccgtcctccctcgagcgaaggcgggacgcgctcctcgcctacgcgcgcgccctgtccct 18327258

                                                                            
Query: 385      cgtcgagccccgcttccccatctcccccgaccgcgcccacgtccactccctctccttcac 444
                ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 18327257 cgtcgagccccgcttccccatctcctccgaccgcgcccacgtccactccctcgccttcac 18327198

                                      
Query: 445      ctggcacgacgccttcaagacc 466
                ||||||||||||||||||||||
Sbjct: 18327197 ctggcacgacgccttcaagacc 18327176



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 242      cgcgacgcggccaccgccgacgacgacc 269
                |||| ||| |||||||||||||||||||
Sbjct: 16721878 cgcggcgccgccaccgccgacgacgacc 16721851
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  285 bits (144), Expect = 6e-74
 Identities = 278/322 (86%), Gaps = 3/322 (0%)
 Strand = Plus / Minus

                                                                            
Query: 145      ggcggccaacgtcatgctggcgatccacgagaagaaggccgcggccgtcgacctctaccg 204
                |||||| ||||| |||||||||||||||||||||| | || |  ||  ||||||||||||
Sbjct: 18337147 ggcggcgaacgtgatgctggcgatccacgagaagaggaccacccccaccgacctctaccg 18337088

                                                                            
Query: 205      cccgctccgccagtacatcgcctccgcctactcggagcgcgacgcggccaccgccgacga 264
                |||||||||||  |||||||||||||||||||||||||| || |||||| | ||||||||
Sbjct: 18337087 cccgctccgcctctacatcgcctccgcctactcggagcgggaggcggccgcggccgacga 18337028

                                                                            
Query: 265      cgacctctgcgccgtgcgcgacctccgcgccgcggccgtcgagagcccctgcctcccgga 324
                |||||||  ||| ||||||||||| |||||||    |||||||   || |  ||||||||
Sbjct: 18337027 cgacctcgccgcggtgcgcgacctgcgcgccga---cgtcgagcagccgtcgctcccgga 18336971

                                                                            
Query: 325      ctcctcctccctcgagcagcgccgcgccgcgctcctggcctacgcccgcgcgctcgccct 384
                | | |||||||||||||   | || | ||||||||| |||||||| ||||| ||  ||||
Sbjct: 18336970 cccgtcctccctcgagcgaaggcgggacgcgctcctcgcctacgcgcgcgccctgtccct 18336911

                                                                            
Query: 385      cgtcgagccccgcttccccatctcccccgaccgcgcccacgtccactccctctccttcac 444
                ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 18336910 cgtcgagccccgcttccccatctcctccgaccgcgcccacgtccactccctcgccttcac 18336851

                                      
Query: 445      ctggcacgacgccttcaagacc 466
                ||||||||||||||||||||||
Sbjct: 18336850 ctggcacgacgccttcaagacc 18336829



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 242      cgcgacgcggccaccgccgacgacgacc 269
                |||| ||| |||||||||||||||||||
Sbjct: 16730918 cgcggcgccgccaccgccgacgacgacc 16730891
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>dbj|AK103856.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033148O10, full
           insert sequence
          Length = 3011

 Score =  278 bits (140), Expect = 2e-71
 Identities = 277/322 (86%), Gaps = 3/322 (0%)
 Strand = Plus / Plus

                                                                       
Query: 145 ggcggccaacgtcatgctggcgatccacgagaagaaggccgcggccgtcgacctctaccg 204
           |||||| ||||| |||||||||||||||||||||| | || |  ||  ||||||||||||
Sbjct: 129 ggcggcgaacgtgatgctggcgatccacgagaagaggaccacccccaccgacctctaccg 188

                                                                       
Query: 205 cccgctccgccagtacatcgcctccgcctactcggagcgcgacgcggccaccgccgacga 264
           |||||||||||  |||||||||||||||||||||||||| || |||||| | ||||||||
Sbjct: 189 cccgctccgcctctacatcgcctccgcctactcggagcgggaggcggccgcggccgacga 248

                                                                       
Query: 265 cgacctctgcgccgtgcgcgacctccgcgccgcggccgtcgagagcccctgcctcccgga 324
           |||||||  ||| ||||||||||| |||||||    |||||||   || |  ||||||||
Sbjct: 249 cgacctcgccgcggtgcgcgacctgcgcgccga---cgtcgagcagccgtcgctcccgga 305

                                                                       
Query: 325 ctcctcctccctcgagcagcgccgcgccgcgctcctggcctacgcccgcgcgctcgccct 384
           | | |||||||||||||   | || | ||||||||| |||||||| ||||| ||  ||||
Sbjct: 306 cccgtcctccctcgagcgaaggcgggacgcgctcctcgcctacgcgcgcgccctgtccct 365

                                                                       
Query: 385 cgtcgagccccgcttccccatctcccccgaccgcgcccacgtccactccctctccttcac 444
           ||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||
Sbjct: 366 cgtcgagccccgcttccccatctcctccgaccgcgccaacgtccactccctcgccttcac 425

                                 
Query: 445 ctggcacgacgccttcaagacc 466
           ||||||||||||||||||||||
Sbjct: 426 ctggcacgacgccttcaagacc 447
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 63/70 (90%)
 Strand = Plus / Plus

                                                                            
Query: 202      ccgcccgctccgccagtacatcgcctccgcctactcggagcgcgacgcggccaccgccga 261
                ||||||||||||||   ||||||||||||||||||||||||| || |||||| | |||||
Sbjct: 18973453 ccgcccgctccgcctccacatcgcctccgcctactcggagcgggaggcggccgcggccga 18973512

                          
Query: 262      cgacgacctc 271
                ||||||||||
Sbjct: 18973513 cgacgacctc 18973522



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                             
Query: 433      cctctccttcacctggcacgacgccttca 461
                |||| ||||||||||||||||||||||||
Sbjct: 25613323 cctcgccttcacctggcacgacgccttca 25613295



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                            
Query: 352      cgcgctcctggcctacgcccgcgcgctcgccctcgtcgagcccc 395
                ||||||| | |||||||||||||| ||| ||||| |||||||||
Sbjct: 18973532 cgcgctcatcgcctacgcccgcgccctctccctcatcgagcccc 18973575
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>dbj|AP005842.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0003H22
          Length = 68256

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 63/70 (90%)
 Strand = Plus / Plus

                                                                         
Query: 202   ccgcccgctccgccagtacatcgcctccgcctactcggagcgcgacgcggccaccgccga 261
             ||||||||||||||   ||||||||||||||||||||||||| || |||||| | |||||
Sbjct: 28774 ccgcccgctccgcctccacatcgcctccgcctactcggagcgggaggcggccgcggccga 28833

                       
Query: 262   cgacgacctc 271
             ||||||||||
Sbjct: 28834 cgacgacctc 28843



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                         
Query: 352   cgcgctcctggcctacgcccgcgcgctcgccctcgtcgagcccc 395
             ||||||| | |||||||||||||| ||| ||||| |||||||||
Sbjct: 28853 cgcgctcatcgcctacgcccgcgccctctccctcatcgagcccc 28896
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>gb|AC137610.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone
              OSJNBa0018H09, complete sequence
          Length = 155329

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 51/55 (92%)
 Strand = Plus / Plus

                                                                     
Query: 352    cgcgctcctggcctacgcccgcgcgctcgccctcgtcgagccccgcttccccatc 406
              ||||||||| |||||||||||||| ||| ||||||||||||| ||||||||||||
Sbjct: 129691 cgcgctcctcgcctacgcccgcgccctctccctcgtcgagccgcgcttccccatc 129745



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 60/67 (89%)
 Strand = Plus / Plus

                                                                          
Query: 205    cccgctccgccagtacatcgcctccgcctactcggagcgcgacgcggccaccgccgacga 264
              |||||||||||   ||||||||||||||||||||||||| || |||||| | ||||||||
Sbjct: 129615 cccgctccgcctccacatcgcctccgcctactcggagcgggaggcggccgcggccgacga 129674

                     
Query: 265    cgacctc 271
              |||||||
Sbjct: 129675 cgacctc 129681
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>gb|AC130731.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0692E03,
           complete sequence
          Length = 74462

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 51/55 (92%)
 Strand = Plus / Plus

                                                                  
Query: 352 cgcgctcctggcctacgcccgcgcgctcgccctcgtcgagccccgcttccccatc 406
           ||||||||| |||||||||||||| ||| ||||||||||||| ||||||||||||
Sbjct: 684 cgcgctcctcgcctacgcccgcgccctctccctcgtcgagccgcgcttccccatc 738



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 60/67 (89%)
 Strand = Plus / Plus

                                                                       
Query: 205 cccgctccgccagtacatcgcctccgcctactcggagcgcgacgcggccaccgccgacga 264
           |||||||||||   ||||||||||||||||||||||||| || |||||| | ||||||||
Sbjct: 608 cccgctccgcctccacatcgcctccgcctactcggagcgggaggcggccgcggccgacga 667

                  
Query: 265 cgacctc 271
           |||||||
Sbjct: 668 cgacctc 674
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 51/55 (92%)
 Strand = Plus / Plus

                                                                       
Query: 352      cgcgctcctggcctacgcccgcgcgctcgccctcgtcgagccccgcttccccatc 406
                ||||||||| |||||||||||||| ||| ||||||||||||| ||||||||||||
Sbjct: 11227437 cgcgctcctcgcctacgcccgcgccctctccctcgtcgagccgcgcttccccatc 11227491



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 60/67 (89%)
 Strand = Plus / Plus

                                                                            
Query: 205      cccgctccgccagtacatcgcctccgcctactcggagcgcgacgcggccaccgccgacga 264
                |||||||||||   ||||||||||||||||||||||||| || |||||| | ||||||||
Sbjct: 11227361 cccgctccgcctccacatcgcctccgcctactcggagcgggaggcggccgcggccgacga 11227420

                       
Query: 265      cgacctc 271
                |||||||
Sbjct: 11227421 cgacctc 11227427



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 52/60 (86%), Gaps = 3/60 (5%)
 Strand = Plus / Minus

                                                                            
Query: 3        tatagacaagcatatgtccgaattttcttcatgtggaacgatctaatcttctctatgagg 62
                |||||||||||||||||| |||||   |||||||||||    ||||||||||||||||||
Sbjct: 26069152 tatagacaagcatatgtctgaatt---ttcatgtggaaaagcctaatcttctctatgagg 26069096



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 286      cctccgcgccgcggccgtcg 305
                ||||||||||||||||||||
Sbjct: 27889594 cctccgcgccgcggccgtcg 27889613
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 76/90 (84%)
 Strand = Plus / Minus

                                                                          
Query: 317    ctcccggactcctcctccctcgagcagcgccgcgccgcgctcctggcctacgcccgcgcg 376
              |||||| || ||||||||||||||| | | || |  |||||||| ||||| ||| |||| 
Sbjct: 310644 ctcccgaacccctcctccctcgagcggaggcgggatgcgctcctcgcctatgcctgcgcc 310585

                                            
Query: 377    ctcgccctcgtcgagccccgcttccccatc 406
              ||| |||||||||||||||| |||||||||
Sbjct: 310584 ctctccctcgtcgagccccgtttccccatc 310555



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                          
Query: 206    ccgctccgccagtacatcgcctccgcctactcggagcgcgacgcggccaccgccgacgac 265
              ||||||||||  |||||| ||||||||||||||||||  || || ||| | ||||| |||
Sbjct: 310752 ccgctccgcctctacatcacctccgcctactcggagcaggaggcagccgcggccgatgac 310693

                    
Query: 266    gacctc 271
              ||||||
Sbjct: 310692 gacctc 310687
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>gb|AC107224.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0009C08, complete sequence
          Length = 137033

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 76/90 (84%)
 Strand = Plus / Minus

                                                                         
Query: 317   ctcccggactcctcctccctcgagcagcgccgcgccgcgctcctggcctacgcccgcgcg 376
             |||||| || ||||||||||||||| | | || |  |||||||| ||||| ||| |||| 
Sbjct: 38172 ctcccgaacccctcctccctcgagcggaggcgggatgcgctcctcgcctatgcctgcgcc 38113

                                           
Query: 377   ctcgccctcgtcgagccccgcttccccatc 406
             ||| |||||||||||||||| |||||||||
Sbjct: 38112 ctctccctcgtcgagccccgtttccccatc 38083



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                         
Query: 206   ccgctccgccagtacatcgcctccgcctactcggagcgcgacgcggccaccgccgacgac 265
             ||||||||||  |||||| ||||||||||||||||||  || || ||| | ||||| |||
Sbjct: 38280 ccgctccgcctctacatcacctccgcctactcggagcaggaggcagccgcggccgatgac 38221

                   
Query: 266   gacctc 271
             ||||||
Sbjct: 38220 gacctc 38215
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
              complete sequence
          Length = 36192742

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 76/90 (84%)
 Strand = Plus / Minus

                                                                          
Query: 317    ctcccggactcctcctccctcgagcagcgccgcgccgcgctcctggcctacgcccgcgcg 376
              |||||| || ||||||||||||||| | | || |  |||||||| ||||| ||| |||| 
Sbjct: 310642 ctcccgaacccctcctccctcgagcggaggcgggatgcgctcctcgcctatgcctgcgcc 310583

                                            
Query: 377    ctcgccctcgtcgagccccgcttccccatc 406
              ||| |||||||||||||||| |||||||||
Sbjct: 310582 ctctccctcgtcgagccccgtttccccatc 310553



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                          
Query: 206    ccgctccgccagtacatcgcctccgcctactcggagcgcgacgcggccaccgccgacgac 265
              ||||||||||  |||||| ||||||||||||||||||  || || ||| | ||||| |||
Sbjct: 310750 ccgctccgcctctacatcacctccgcctactcggagcaggaggcagccgcggccgatgac 310691

                    
Query: 266    gacctc 271
              ||||||
Sbjct: 310690 gacctc 310685
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>gb|AC155101.19| Medicago truncatula clone mth2-139j13, complete sequence
          Length = 124152

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 55/62 (88%), Gaps = 1/62 (1%)
 Strand = Plus / Minus

                                                                          
Query: 4      atagacaagcatatgtccgaattttcttcatgtggaacgatctaatcttctctatgaggc 63
              ||||||||||||||||| |||||   |||||||||||   ||||||||||||||||||||
Sbjct: 100716 atagacaagcatatgtctgaattaa-ttcatgtggaaaattctaatcttctctatgaggc 100658

                
Query: 64     ca 65
              ||
Sbjct: 100657 ca 100656
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>gb|AC108499.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1187_E11,
             complete sequence
          Length = 133352

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 52/60 (86%), Gaps = 3/60 (5%)
 Strand = Plus / Minus

                                                                         
Query: 3     tatagacaagcatatgtccgaattttcttcatgtggaacgatctaatcttctctatgagg 62
             |||||||||||||||||| |||||   |||||||||||    ||||||||||||||||||
Sbjct: 93913 tatagacaagcatatgtctgaatt---ttcatgtggaaaagcctaatcttctctatgagg 93857
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>emb|AJ490435.1|OSA490435 Oryza sativa z191a snoRNA
          Length = 83

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 52/60 (86%), Gaps = 3/60 (5%)
 Strand = Plus / Plus

                                                                      
Query: 3  tatagacaagcatatgtccgaattttcttcatgtggaacgatctaatcttctctatgagg 62
          |||||||||||||||||| |||||   |||||||||||    ||||||||||||||||||
Sbjct: 23 tatagacaagcatatgtctgaatt---ttcatgtggaaaagcctaatcttctctatgagg 79
to top
>ref|XM_466958.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1376

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 433 cctctccttcacctggcacgacgccttca 461
           |||| ||||||||||||||||||||||||
Sbjct: 258 cctcgccttcacctggcacgacgccttca 286
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                    
Query: 346     ccgcgccgcgctcctggcctacgcccgcgcgctcgcc 382
               |||||||||||||| ||||  ||||||||||||||||
Sbjct: 1386170 ccgcgccgcgctccaggcccgcgcccgcgcgctcgcc 1386134



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 337     cgagcagcgccgcgccgcgctcct 360
               |||| |||||||||||||||||||
Sbjct: 1510986 cgaggagcgccgcgccgcgctcct 1511009
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>dbj|AP005513.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0014E22
          Length = 157627

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 433   cctctccttcacctggcacgacgccttca 461
             |||| ||||||||||||||||||||||||
Sbjct: 83370 cctcgccttcacctggcacgacgccttca 83342
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>dbj|AP004768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0010C01
          Length = 186185

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 433   cctctccttcacctggcacgacgccttca 461
             |||| ||||||||||||||||||||||||
Sbjct: 15999 cctcgccttcacctggcacgacgccttca 15971
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>dbj|AK060633.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-A12, full
           insert sequence
          Length = 1376

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 433 cctctccttcacctggcacgacgccttca 461
           |||| ||||||||||||||||||||||||
Sbjct: 258 cctcgccttcacctggcacgacgccttca 286
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>emb|AL161535.2|ATCHRIV35 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 35
          Length = 199280

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 43     atctaatcttctctatgaggcca 65
              |||||||||||||||||||||||
Sbjct: 165019 atctaatcttctctatgaggcca 165041
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>emb|AL049751.1|ATF17N18 Arabidopsis thaliana DNA chromosome 4, BAC clone F17N18 (ESSA project)
          Length = 86377

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 43    atctaatcttctctatgaggcca 65
             |||||||||||||||||||||||
Sbjct: 41134 atctaatcttctctatgaggcca 41156
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 238     ggagcgcgacgcggccaccgccg 260
               |||||||||||||||||||||||
Sbjct: 5696218 ggagcgcgacgcggccaccgccg 5696196



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 339     agcagcgccgcgccgcgctcc 359
               |||||||||||||||||||||
Sbjct: 1643308 agcagcgccgcgccgcgctcc 1643288
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>emb|AL939116.1|SCO939116 Streptomyces coelicolor A3(2) complete genome; segment 13/29
          Length = 293050

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 239    gagcgcgacgcggccaccgccg 260
              ||||||||||||||||||||||
Sbjct: 139928 gagcgcgacgcggccaccgccg 139949
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>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB
          Length = 1683333

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 368    gcccgcgcgctcgccctcgtcg 389
              ||||||||||||||||||||||
Sbjct: 823192 gcccgcgcgctcgccctcgtcg 823213
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 341     cagcgccgcgccgcgctcctgg 362
               ||||||||||||||||||||||
Sbjct: 1451800 cagcgccgcgccgcgctcctgg 1451779
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>emb|BX933175.1| Gallus gallus finished cDNA, clone ChEST380k11
          Length = 987

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 335 ctcgagcagcgccgcgccgcgc 356
           ||||||||||||||||||||||
Sbjct: 5   ctcgagcagcgccgcgccgcgc 26
to top
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 251     gccaccgccgacgacgacctct 272
               ||||||||||||||||||||||
Sbjct: 2470955 gccaccgccgacgacgacctct 2470934



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 250     ggccaccgccgacgacgacc 269
               ||||||||||||||||||||
Sbjct: 5188795 ggccaccgccgacgacgacc 5188776



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 343     gcgccgcgccgcgctcctgg 362
               ||||||||||||||||||||
Sbjct: 2700454 gcgccgcgccgcgctcctgg 2700435
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>dbj|AB020746.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MOB24
          Length = 79706

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 1     attatagacaagcatatgtccgaatt 26
             |||||||||||||||||||| |||||
Sbjct: 70673 attatagacaagcatatgtctgaatt 70648



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 44    tctaatcttctctatgaggcc 64
             |||||||||||||||||||||
Sbjct: 70779 tctaatcttctctatgaggcc 70759



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 43    atctaatcttctctatgagg 62
             ||||||||||||||||||||
Sbjct: 70632 atctaatcttctctatgagg 70613
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>emb|AJ240073.1|ATH240073 Arabidopsis thaliana mRNA for Z4 snoRNA
          Length = 155

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 1   attatagacaagcatatgtccgaatt 26
           |||||||||||||||||||| |||||
Sbjct: 127 attatagacaagcatatgtctgaatt 152



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 44 tctaatcttctctatgaggcc 64
          |||||||||||||||||||||
Sbjct: 21 tctaatcttctctatgaggcc 41
to top
>emb|CR729955.2|CNS0GQ6H Tetraodon nigroviridis full-length cDNA
          Length = 1224

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 172 cgagaagaaggccgcggccgtcgac 196
           |||||||||||||||||||| ||||
Sbjct: 629 cgagaagaaggccgcggccgccgac 653
to top
>emb|BX572598.1| Rhodopseudomonas palustris CGA009 complete genome; segment 6/16
          Length = 346879

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 337   cgagcagcgccgcgccgcgctcctg 361
             |||||||||||||| ||||||||||
Sbjct: 21724 cgagcagcgccgcgacgcgctcctg 21748
to top
>emb|AJ810091.1| Streptomyces fradiae p3 gene for serine protease 3
          Length = 3919

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 177 agaaggccgcggccgtcgacc 197
           |||||||||||||||||||||
Sbjct: 829 agaaggccgcggccgtcgacc 849
to top
>gb|AF533768.1| Cercopithecine herpesvirus 1 strain E2490, complete genome
          Length = 156789

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 280   gcgcgacctccgcgccgcggccgtc 304
             |||||| ||||||||||||||||||
Sbjct: 21402 gcgcgagctccgcgccgcggccgtc 21426
to top
>tpg|BK000869.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M266, complete sequence
          Length = 8882

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 244  cgacgcggccaccgccgacgacgac 268
            |||||||||| ||||||||||||||
Sbjct: 3179 cgacgcggccgccgccgacgacgac 3203
to top
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 337    cgagcagcgccgcgccgcgctcctg 361
              |||||| ||||||||||||||||||
Sbjct: 976227 cgagcatcgccgcgccgcgctcctg 976251
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 244      cgacgcggccaccgccgacgacgac 268
                |||||||||| ||||||||||||||
Sbjct: 16982584 cgacgcggccgccgccgacgacgac 16982608
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                         
Query: 248      gcggccaccgccgacgacgacctctgcgccgtgcgcgacct 288
                |||||| | |||||||||||||||  ||| |||||||||||
Sbjct: 38936715 gcggccgcggccgacgacgacctcgccgcggtgcgcgacct 38936675



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 317      ctcccggactcctcctccctcgagc 341
                ||||||||| |||||||||||||||
Sbjct: 38936649 ctcccggacccctcctccctcgagc 38936625



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 338      gagcagcgccgcgccgcgct 357
                ||||||||||||||||||||
Sbjct: 20626327 gagcagcgccgcgccgcgct 20626346
to top
>dbj|AP003349.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0674H09
          Length = 142955

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                      
Query: 248   gcggccaccgccgacgacgacctctgcgccgtgcgcgacct 288
             |||||| | |||||||||||||||  ||| |||||||||||
Sbjct: 10348 gcggccgcggccgacgacgacctcgccgcggtgcgcgacct 10308



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 317   ctcccggactcctcctccctcgagc 341
             ||||||||| |||||||||||||||
Sbjct: 10282 ctcccggacccctcctccctcgagc 10258
to top
>dbj|AP003316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0696G06
          Length = 142571

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                       
Query: 248    gcggccaccgccgacgacgacctctgcgccgtgcgcgacct 288
              |||||| | |||||||||||||||  ||| |||||||||||
Sbjct: 101501 gcggccgcggccgacgacgacctcgccgcggtgcgcgacct 101461



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 317    ctcccggactcctcctccctcgagc 341
              ||||||||| |||||||||||||||
Sbjct: 101435 ctcccggacccctcctccctcgagc 101411
to top
>dbj|AB096160.1| Cercopithecine herpesvirus 1 DNA, UL region, complete sequence
          Length = 106873

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 280   gcgcgacctccgcgccgcggccgtc 304
             |||||| ||||||||||||||||||
Sbjct: 12463 gcgcgagctccgcgccgcggccgtc 12487
to top
>emb|AL606990.3|OSJN00122 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0066J23,
             complete sequence
          Length = 156934

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 244   cgacgcggccaccgccgacgacgac 268
             |||||||||| ||||||||||||||
Sbjct: 37840 cgacgcggccgccgccgacgacgac 37864
to top
>gb|AC152105.2| Ostreococcus sp. CCE9901 clone JGIACFB-9A3, complete sequence
          Length = 40909

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 244  cgacgcggccaccgccgacgacga 267
            ||||||| ||||||||||||||||
Sbjct: 8348 cgacgcgtccaccgccgacgacga 8371
to top
>gb|DQ215235.1| Taeniopygia guttata clone 0058P0026C11 Nur77 downstream protein 2
           variant 5-like mRNA, complete sequence
          Length = 653

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 343 gcgccgcgccgcgctcctgg 362
           ||||||||||||||||||||
Sbjct: 38  gcgccgcgccgcgctcctgg 19
to top
>ref|XM_465997.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 792

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 364 ctacgcccgcgcgctcgccctcgtcgagcccc 395
           |||||||||||| ||| ||||| |||||||||
Sbjct: 792 ctacgcccgcgccctctccctcatcgagcccc 761
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>ref|XM_450685.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1125

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 286 cctccgcgccgcggccgtcg 305
           ||||||||||||||||||||
Sbjct: 664 cctccgcgccgcggccgtcg 645
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>ref|NM_196928.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBa0006L06.25), mRNA
          Length = 270

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 242 cgcgacgcggccaccgccgacgacgacc 269
           |||| ||| |||||||||||||||||||
Sbjct: 107 cgcggcgccgccaccgccgacgacgacc 80
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>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 370     ccgcgcgctcgccctcgtcgagccccgc 397
               ||||||||||||| ||||||||| ||||
Sbjct: 3176051 ccgcgcgctcgccatcgtcgagcgccgc 3176078
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>ref|NM_193402.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2886

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 338  gagcagcgccgcgccgcgct 357
            ||||||||||||||||||||
Sbjct: 1714 gagcagcgccgcgccgcgct 1733
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>gb|BT017923.1| Zea mays clone EL01N0519D06.c mRNA sequence
          Length = 1029

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 6   agacaagcatatgtccgaat 25
           ||||||||||||||||||||
Sbjct: 359 agacaagcatatgtccgaat 378
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>gb|AY007685.2| Homo sapiens telomerase catalytic subunit (TERT) and sodium
             channel-like protein genes, complete cds
          Length = 92564

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 421   ccacgtccactccctctcct 440
             ||||||||||||||||||||
Sbjct: 58412 ccacgtccactccctctcct 58431
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 289     ccgcgccgcggccgtcgaga 308
               ||||||||||||||||||||
Sbjct: 1629262 ccgcgccgcggccgtcgaga 1629281
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 337    cgagcagcgccgcgccgcgc 356
              ||||||||||||||||||||
Sbjct: 340977 cgagcagcgccgcgccgcgc 340958
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>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 336     tcgagcagcgccgcgccgcg 355
               ||||||||||||||||||||
Sbjct: 1769016 tcgagcagcgccgcgccgcg 1769035
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>gb|AC124143.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0053D02,
              complete sequence
          Length = 157106

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 286    cctccgcgccgcggccgtcg 305
              ||||||||||||||||||||
Sbjct: 120011 cctccgcgccgcggccgtcg 120030
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 335    ctcgagcagcgccgcgccgcgctc 358
              ||||||||||| ||||||||||||
Sbjct: 851529 ctcgagcagcgacgcgccgcgctc 851552



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 175    gaagaaggccgcggccgtcg 194
              ||||||||||||||||||||
Sbjct: 548396 gaagaaggccgcggccgtcg 548415
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 337     cgagcagcgccgcgccgcgc 356
               ||||||||||||||||||||
Sbjct: 1071537 cgagcagcgccgcgccgcgc 1071518
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>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 279     tgcgcgacctccgcgccgcg 298
               ||||||||||||||||||||
Sbjct: 4206894 tgcgcgacctccgcgccgcg 4206913
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>emb|CR682939.2|CNS0FPWN Tetraodon nigroviridis full-length cDNA
          Length = 1015

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 428 cactccctctccttcacctg 447
           ||||||||||||||||||||
Sbjct: 37  cactccctctccttcacctg 56
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>emb|AL354713.7| Human DNA sequence from clone RP11-498A13 on chromosome 1 Contains a
             processed pseudogene for nuclear receptor binding factor 2
             (NRBF2), a processed pseudogene similar to part of
             olfactory receptor, family 11, subfamily H, member 6
             (OR11H6) and the 5' end of the CD53 gene for CD53 antigen,
             complete sequence
          Length = 138370

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 11    agcatatgtccgaattttcttcat 34
             |||||||||| |||||||||||||
Sbjct: 29083 agcatatgtcagaattttcttcat 29060
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>emb|CR380959.1| Candida glabrata strain CBS138 chromosome M complete sequence
          Length = 1400893

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      attatagacaagcatatgtc 20
              ||||||||||||||||||||
Sbjct: 770400 attatagacaagcatatgtc 770381
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 335     ctcgagcagcgccgcgccgcgctc 358
               ||||||||||| ||||||||||||
Sbjct: 2170213 ctcgagcagcgacgcgccgcgctc 2170236



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 175     gaagaaggccgcggccgtcg 194
               ||||||||||||||||||||
Sbjct: 1867683 gaagaaggccgcggccgtcg 1867702
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 337    cgagcagcgccgcgccgcgc 356
              ||||||||||||||||||||
Sbjct: 952532 cgagcagcgccgcgccgcgc 952513
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>gb|AC022457.8| Oryza sativa chromosome 10 BAC OSJNBa0006L06 genomic sequence, complete
             sequence
          Length = 162339

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 242   cgcgacgcggccaccgccgacgacgacc 269
             |||| ||| |||||||||||||||||||
Sbjct: 66395 cgcggcgccgccaccgccgacgacgacc 66368
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>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 367    cgcccgcgcgctcgccctcg 386
              ||||||||||||||||||||
Sbjct: 463154 cgcccgcgcgctcgccctcg 463135
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 337     cgagcagcgccgcgccgcgc 356
               ||||||||||||||||||||
Sbjct: 4959370 cgagcagcgccgcgccgcgc 4959389
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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 335     ctcgagcagcgccgcgccgcgctc 358
               ||||||||||| ||||||||||||
Sbjct: 1743699 ctcgagcagcgacgcgccgcgctc 1743722



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 175    gaagaaggccgcggccgtcg 194
              ||||||||||||||||||||
Sbjct: 915616 gaagaaggccgcggccgtcg 915597
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 286      cctccgcgccgcggccgtcg 305
                ||||||||||||||||||||
Sbjct: 12231065 cctccgcgccgcggccgtcg 12231046
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 45      ctaatcttctctatgaggcc 64
               ||||||||||||||||||||
Sbjct: 3288315 ctaatcttctctatgaggcc 3288334
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>gb|AC114291.2| Homo sapiens chromosome 5 clone CTD-3080P12, complete sequence
          Length = 202305

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 421    ccacgtccactccctctcct 440
              ||||||||||||||||||||
Sbjct: 143235 ccacgtccactccctctcct 143216
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>dbj|AP004258.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0024F24
          Length = 172642

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 338   gagcagcgccgcgccgcgct 357
             ||||||||||||||||||||
Sbjct: 88303 gagcagcgccgcgccgcgct 88322
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>dbj|AP004225.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1156H12
          Length = 159509

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 338    gagcagcgccgcgccgcgct 357
              ||||||||||||||||||||
Sbjct: 150149 gagcagcgccgcgccgcgct 150168
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 349     cgccgcgctcctggcctacgcccg 372
               |||| |||||||||||||||||||
Sbjct: 3540066 cgccacgctcctggcctacgcccg 3540043
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>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 372    gcgcgctcgccctcgtcgag 391
              ||||||||||||||||||||
Sbjct: 868499 gcgcgctcgccctcgtcgag 868480
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>emb|AJ490438.1|OSA490438 Oryza sativa z191b snoRNA
          Length = 88

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 45 ctaatcttctctatgaggcc 64
          ||||||||||||||||||||
Sbjct: 65 ctaatcttctctatgaggcc 84
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>dbj|AP005580.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1759_F09
          Length = 149501

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 286    cctccgcgccgcggccgtcg 305
              ||||||||||||||||||||
Sbjct: 142524 cctccgcgccgcggccgtcg 142505
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>dbj|AP005872.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:B1168F12
          Length = 141524

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 286   cctccgcgccgcggccgtcg 305
             ||||||||||||||||||||
Sbjct: 14619 cctccgcgccgcggccgtcg 14600
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>emb|Y13432.1|RMPRMNT40 Rhizobium meliloti plasmid pRmNT40 DNA
          Length = 3748

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 141  cgatggcggccaacgtcatg 160
            ||||||||||||||||||||
Sbjct: 2530 cgatggcggccaacgtcatg 2511
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>dbj|AP004460.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0438H08
          Length = 148626

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    ctaatcttctctatgaggcc 64
             ||||||||||||||||||||
Sbjct: 65882 ctaatcttctctatgaggcc 65901
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>dbj|AK108440.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-143-B10, full
           insert sequence
          Length = 877

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 242 cgcgacgcggccaccgccgacgacgacc 269
           |||| ||| |||||||||||||||||||
Sbjct: 411 cgcggcgccgccaccgccgacgacgacc 384
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 339     agcagcgccgcgccgcgctc 358
               ||||||||||||||||||||
Sbjct: 3059558 agcagcgccgcgccgcgctc 3059577
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 335    ctcgagcagcgccgcgccgcgctc 358
              ||||||||||| ||||||||||||
Sbjct: 904110 ctcgagcagcgacgcgccgcgctc 904087
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 146    gcggccaacgtcatgctggcgatc 169
              ||||||||||||||||||| ||||
Sbjct: 665921 gcggccaacgtcatgctggagatc 665898
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>gb|DQ264729.1| Homo sapiens telomerase reverse transcriptase (TERT) gene, complete cds
          Length = 44990

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 421   ccacgtccactccctctcct 440
             ||||||||||||||||||||
Sbjct: 37627 ccacgtccactccctctcct 37646
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>emb|AL136374.4| Human DNA sequence from clone RP1-244G5 on chromosome 1q24.3-25.3,
             complete sequence
          Length = 119853

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 11    agcatatgtccgaattttcttcat 34
             |||||||||| |||||||||||||
Sbjct: 65043 agcatatgtcagaattttcttcat 65020


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,297,758
Number of Sequences: 3902068
Number of extensions: 3297758
Number of successful extensions: 84044
Number of sequences better than 10.0: 86
Number of HSP's better than 10.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77001
Number of HSP's gapped (non-prelim): 7024
length of query: 467
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 445
effective length of database: 17,147,199,772
effective search space: 7630503898540
effective search space used: 7630503898540
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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