ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl03g02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_476051.1| Oryza sativa (japonica cultivar-group), predic... 143 6e-31
2gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome... 143 6e-31
3gb|AC084817.5| Oryza sativa (japonica cultivar-group) chromosome... 143 6e-31
4dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 143 6e-31
5ref|XM_550272.1| Oryza sativa (japonica cultivar-group), mRNA 88 3e-14
6dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 88 3e-14
7dbj|AP003282.2| Oryza sativa (japonica cultivar-group) genomic D... 88 3e-14
8gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 46 0.097
9gb|BC062017.1| Rattus norvegicus heat shock 70kDa protein 5 (glu... 44 0.38
10ref|NM_013083.1| Rattus norvegicus heat shock 70kDa protein 5 (g... 44 0.38
11gb|M14866.1|RATGRP78 Rat 78-kDa glucose regulated protein (GRP78... 44 0.38
12gb|M14050.1|RATBIP Rat immunoglobulin heavy chain binding protei... 44 0.38
13gb|DQ213630.1| Taeniopygia guttata clone 0058P0048B03 RIKEN cDNA... 42 1.5
14gb|DQ213629.1| Taeniopygia guttata clone 0058P0020C07 RIKEN cDNA... 42 1.5
15gb|DQ213627.1| Taeniopygia guttata clone 0058P0048A03 RIKEN cDNA... 42 1.5
16emb|AL662812.12| Mouse DNA sequence from clone RP23-48A2 on chro... 42 1.5
17gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 42 1.5
18dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 1.5
19dbj|AK105519.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
20gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 42 1.5
21gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 42 1.5
22gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
23gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 40 6.0
24ref|XM_483121.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.0
25gb|AC133004.4| Oryza sativa (japonica cultivar-group) chromosome... 40 6.0
26ref|XM_985471.1| PREDICTED: Mus musculus expressed sequence C773... 40 6.0
27ref|XM_845807.1| PREDICTED: Canis familiaris similar to slit hom... 40 6.0
28ref|XM_754880.1| Ustilago maydis 521 hypothetical protein (UM038... 40 6.0
29gb|AF480884.1| Chimpanzee cytomegalovirus, complete genome 40 6.0
30dbj|AK123959.1| Homo sapiens cDNA FLJ41965 fis, clone PUAEN2007350 40 6.0
31gb|AC041040.6| Homo sapiens chromosome 8, clone RP11-513O13, com... 40 6.0
32dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
33dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
34dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
35dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 6.0
36dbj|AP003711.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
37dbj|AP003626.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
38dbj|AP004762.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
39dbj|AK110374.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.0
40emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 6.0
41gb|AF466201.1| Sorghum bicolor clone SBTXS_0032H17 putative cyto... 40 6.0
42dbj|AK060497.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.0
43gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.0 
>ref|XM_476051.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3372

 Score =  143 bits (72), Expect = 6e-31
 Identities = 132/152 (86%)
 Strand = Plus / Plus

                                                                       
Query: 292 ccgtgccggtggaccggcgtgtcgtgcaatgccgacggcggcgtcacggagctcagcctg 351
           ||||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||
Sbjct: 181 ccgtgccggtggaccggcgtgacgtgcaatgccgacggcggcgtgacggagctgagcctg 240

                                                                       
Query: 352 cagttcgtcgacctgctgggcggcgtgccggacaatctggctgctgctgtgggcgccacg 411
            |||||||||||||| | ||||||||||||| ||| || || || || |||||   ||||
Sbjct: 241 gagttcgtcgacctgttcggcggcgtgccgggcaacctcgccgccgccgtggggcgcacg 300

                                           
Query: 412 ctcgagcggctggtgctcaccggcacgaacct 443
           ||    |||||||||||||||||| |||||||
Sbjct: 301 ctgacacggctggtgctcaccggcgcgaacct 332
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>gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0685E10,
           complete sequence
          Length = 156772

 Score =  143 bits (72), Expect = 6e-31
 Identities = 132/152 (86%)
 Strand = Plus / Plus

                                                                       
Query: 292 ccgtgccggtggaccggcgtgtcgtgcaatgccgacggcggcgtcacggagctcagcctg 351
           ||||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||
Sbjct: 528 ccgtgccggtggaccggcgtgacgtgcaatgccgacggcggcgtgacggagctgagcctg 587

                                                                       
Query: 352 cagttcgtcgacctgctgggcggcgtgccggacaatctggctgctgctgtgggcgccacg 411
            |||||||||||||| | ||||||||||||| ||| || || || || |||||   ||||
Sbjct: 588 gagttcgtcgacctgttcggcggcgtgccgggcaacctcgccgccgccgtggggcgcacg 647

                                           
Query: 412 ctcgagcggctggtgctcaccggcacgaacct 443
           ||    |||||||||||||||||| |||||||
Sbjct: 648 ctgacacggctggtgctcaccggcgcgaacct 679
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>gb|AC084817.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0419C04,
             complete sequence
          Length = 136713

 Score =  143 bits (72), Expect = 6e-31
 Identities = 132/152 (86%)
 Strand = Plus / Plus

                                                                         
Query: 292   ccgtgccggtggaccggcgtgtcgtgcaatgccgacggcggcgtcacggagctcagcctg 351
             ||||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||
Sbjct: 88743 ccgtgccggtggaccggcgtgacgtgcaatgccgacggcggcgtgacggagctgagcctg 88802

                                                                         
Query: 352   cagttcgtcgacctgctgggcggcgtgccggacaatctggctgctgctgtgggcgccacg 411
              |||||||||||||| | ||||||||||||| ||| || || || || |||||   ||||
Sbjct: 88803 gagttcgtcgacctgttcggcggcgtgccgggcaacctcgccgccgccgtggggcgcacg 88862

                                             
Query: 412   ctcgagcggctggtgctcaccggcacgaacct 443
             ||    |||||||||||||||||| |||||||
Sbjct: 88863 ctgacacggctggtgctcaccggcgcgaacct 88894
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  143 bits (72), Expect = 6e-31
 Identities = 132/152 (86%)
 Strand = Plus / Plus

                                                                           
Query: 292     ccgtgccggtggaccggcgtgtcgtgcaatgccgacggcggcgtcacggagctcagcctg 351
               ||||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||
Sbjct: 4114049 ccgtgccggtggaccggcgtgacgtgcaatgccgacggcggcgtgacggagctgagcctg 4114108

                                                                           
Query: 352     cagttcgtcgacctgctgggcggcgtgccggacaatctggctgctgctgtgggcgccacg 411
                |||||||||||||| | ||||||||||||| ||| || || || || |||||   ||||
Sbjct: 4114109 gagttcgtcgacctgttcggcggcgtgccgggcaacctcgccgccgccgtggggcgcacg 4114168

                                               
Query: 412     ctcgagcggctggtgctcaccggcacgaacct 443
               ||    |||||||||||||||||| |||||||
Sbjct: 4114169 ctgacacggctggtgctcaccggcgcgaacct 4114200



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 322     gccgacggcggcgtcacggag 342
               |||||||||||||||||||||
Sbjct: 4828593 gccgacggcggcgtcacggag 4828573
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>ref|XM_550272.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3354

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 119/144 (82%)
 Strand = Plus / Plus

                                                                       
Query: 292 ccgtgccggtggaccggcgtgtcgtgcaatgccgacggcggcgtcacggagctcagcctg 351
           |||||||||||||| ||||||  |||||||||| | ||  | ||||| ||||| ||||| 
Sbjct: 196 ccgtgccggtggacgggcgtgaggtgcaatgccaatgggcgagtcaccgagctgagcctc 255

                                                                       
Query: 352 cagttcgtcgacctgctgggcggcgtgccggacaatctggctgctgctgtgggcgccacg 411
           |||   || |||||||| ||||||||||||||||| ||| | || ||  ||||| |||||
Sbjct: 256 cagcaagttgacctgctcggcggcgtgccggacaacctgtccgccgccatgggcaccacg 315

                                   
Query: 412 ctcgagcggctggtgctcaccggc 435
           || ||||||||||||||| |||||
Sbjct: 316 ctggagcggctggtgctcgccggc 339
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 119/144 (82%)
 Strand = Plus / Plus

                                                                           
Query: 292     ccgtgccggtggaccggcgtgtcgtgcaatgccgacggcggcgtcacggagctcagcctg 351
               |||||||||||||| ||||||  |||||||||| | ||  | ||||| ||||| ||||| 
Sbjct: 3620718 ccgtgccggtggacgggcgtgaggtgcaatgccaatgggcgagtcaccgagctgagcctc 3620777

                                                                           
Query: 352     cagttcgtcgacctgctgggcggcgtgccggacaatctggctgctgctgtgggcgccacg 411
               |||   || |||||||| ||||||||||||||||| ||| | || ||  ||||| |||||
Sbjct: 3620778 cagcaagttgacctgctcggcggcgtgccggacaacctgtccgccgccatgggcaccacg 3620837

                                       
Query: 412     ctcgagcggctggtgctcaccggc 435
               || ||||||||||||||| |||||
Sbjct: 3620838 ctggagcggctggtgctcgccggc 3620861
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>dbj|AP003282.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0583G08
          Length = 135295

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 119/144 (82%)
 Strand = Plus / Plus

                                                                         
Query: 292   ccgtgccggtggaccggcgtgtcgtgcaatgccgacggcggcgtcacggagctcagcctg 351
             |||||||||||||| ||||||  |||||||||| | ||  | ||||| ||||| ||||| 
Sbjct: 29198 ccgtgccggtggacgggcgtgaggtgcaatgccaatgggcgagtcaccgagctgagcctc 29257

                                                                         
Query: 352   cagttcgtcgacctgctgggcggcgtgccggacaatctggctgctgctgtgggcgccacg 411
             |||   || |||||||| ||||||||||||||||| ||| | || ||  ||||| |||||
Sbjct: 29258 cagcaagttgacctgctcggcggcgtgccggacaacctgtccgccgccatgggcaccacg 29317

                                     
Query: 412   ctcgagcggctggtgctcaccggc 435
             || ||||||||||||||| |||||
Sbjct: 29318 ctggagcggctggtgctcgccggc 29341
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 134     tggcggcggcgcggctgctgctg 156
               |||||||||||||||||||||||
Sbjct: 1003341 tggcggcggcgcggctgctgctg 1003363
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>gb|BC062017.1| Rattus norvegicus heat shock 70kDa protein 5 (glucose-regulated
           protein), mRNA (cDNA clone MGC:72275 IMAGE:5621611),
           complete cds
          Length = 2471

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 133 gtggcggcggcgcggctgctgctgtg 158
           ||||||||||||| ||||||||||||
Sbjct: 157 gtggcggcggcgctgctgctgctgtg 182
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>ref|NM_013083.1| Rattus norvegicus heat shock 70kDa protein 5 (glucose-regulated
           protein) (Hspa5), mRNA
          Length = 2383

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 133 gtggcggcggcgcggctgctgctgtg 158
           ||||||||||||| ||||||||||||
Sbjct: 73  gtggcggcggcgctgctgctgctgtg 98
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>gb|M14866.1|RATGRP78 Rat 78-kDa glucose regulated protein (GRP78) gene, exon 1
          Length = 1081

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 133 gtggcggcggcgcggctgctgctgtg 158
           ||||||||||||| ||||||||||||
Sbjct: 947 gtggcggcggcgctgctgctgctgtg 972
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>gb|M14050.1|RATBIP Rat immunoglobulin heavy chain binding protein (BiP) mRNA, complete
           cds
          Length = 2383

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 133 gtggcggcggcgcggctgctgctgtg 158
           ||||||||||||| ||||||||||||
Sbjct: 73  gtggcggcggcgctgctgctgctgtg 98
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>gb|DQ213630.1| Taeniopygia guttata clone 0058P0048B03 RIKEN cDNA 2610003J06-like
           mRNA, complete sequence
          Length = 967

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 134 tggcggcggcgcggctgctgc 154
           |||||||||||||||||||||
Sbjct: 23  tggcggcggcgcggctgctgc 43
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>gb|DQ213629.1| Taeniopygia guttata clone 0058P0020C07 RIKEN cDNA 2610003J06-like
           mRNA, complete sequence
          Length = 1043

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 134 tggcggcggcgcggctgctgc 154
           |||||||||||||||||||||
Sbjct: 34  tggcggcggcgcggctgctgc 54
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>gb|DQ213627.1| Taeniopygia guttata clone 0058P0048A03 RIKEN cDNA 2610003J06-like
           mRNA, complete sequence
          Length = 967

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 134 tggcggcggcgcggctgctgc 154
           |||||||||||||||||||||
Sbjct: 23  tggcggcggcgcggctgctgc 43
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>emb|AL662812.12| Mouse DNA sequence from clone RP23-48A2 on chromosome 11 Contains the
              gene for a novel protein similar to smoothelin Smtn, three
              novel genes, the Mybbp1a gene for MYB binding protein
              (P160) 1a, a ribosomal protein 7a (Rpl7a) pseudogene, the
              5' end of the Ube2g1 gene for ubiquitin-conjugating enzyme
              E2G 1 (UBC7 homolog, C. elegans) and four CpG islands,
              complete sequence
          Length = 258521

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 135    ggcggcggcgcggctgctgct 155
              |||||||||||||||||||||
Sbjct: 194928 ggcggcggcgcggctgctgct 194908
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>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 132     cgtggcggcggcgcggctgctgctg 156
               |||||||||||||| ||||||||||
Sbjct: 1674856 cgtggcggcggcgctgctgctgctg 1674880
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 417     gcggctggtgctcaccggcac 437
               |||||||||||||||||||||
Sbjct: 1996568 gcggctggtgctcaccggcac 1996548
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>dbj|AK105519.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-F08, full
           insert sequence
          Length = 1724

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 322 gccgacggcggcgtcacggag 342
           |||||||||||||||||||||
Sbjct: 892 gccgacggcggcgtcacggag 872
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 136     gcggcggcgcggctgctgctg 156
               |||||||||||||||||||||
Sbjct: 4488939 gcggcggcgcggctgctgctg 4488959
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 354     gttcgtcgacctgctgggcggcgtg 378
               ||||||||||||||| |||||||||
Sbjct: 2227883 gttcgtcgacctgctcggcggcgtg 2227907
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>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11,
              complete sequence
          Length = 187956

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 322    gccgacggcggcgtcacggag 342
              |||||||||||||||||||||
Sbjct: 101001 gccgacggcggcgtcacggag 100981
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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 33/36 (91%), Gaps = 1/36 (2%)
 Strand = Plus / Minus

                                                   
Query: 122     gttgccggcacgtggcggcggcgcggctgctgctgt 157
               ||||||||||| ||||||||| || |||||||||||
Sbjct: 2009765 gttgccggcac-tggcggcggtgccgctgctgctgt 2009731



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 135     ggcggcggcgcggctgctgc 154
               ||||||||||||||||||||
Sbjct: 1882793 ggcggcggcgcggctgctgc 1882812
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>ref|XM_483121.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3315

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 291 cccgtgccggtggaccggcgtgtcgtgc 318
           |||||||||||||  |||||||||||||
Sbjct: 192 cccgtgccggtggctcggcgtgtcgtgc 219
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>gb|AC133004.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0046F10, complete sequence
          Length = 184041

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 291   cccgtgccggtggaccggcgtgtcgtgc 318
             ||||||||||||| |||||||| |||||
Sbjct: 65915 cccgtgccggtgggccggcgtgacgtgc 65888
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>ref|XM_985471.1| PREDICTED: Mus musculus expressed sequence C77370, transcript
           variant 1 (C77370), mRNA
          Length = 5195

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 133 gtggcggcggcgcggctgctgctg 156
           |||||||||||| |||||||||||
Sbjct: 36  gtggcggcggcggggctgctgctg 13
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>ref|XM_845807.1| PREDICTED: Canis familiaris similar to slit homolog 1 (LOC608704),
           mRNA
          Length = 399

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 387 tctggctgctgctgtgggcg 406
           ||||||||||||||||||||
Sbjct: 251 tctggctgctgctgtgggcg 270
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>ref|XM_754880.1| Ustilago maydis 521 hypothetical protein (UM03826.1) partial mRNA
          Length = 4611

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 340  gagctcagcctgcagttcgt 359
            ||||||||||||||||||||
Sbjct: 1566 gagctcagcctgcagttcgt 1547
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>gb|AF480884.1| Chimpanzee cytomegalovirus, complete genome
          Length = 241087

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 135    ggcggcggcgcggctgctgctgtgctgc 162
              ||||||||||| |||||||||| |||||
Sbjct: 150825 ggcggcggcgccgctgctgctgggctgc 150852
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>dbj|AK123959.1| Homo sapiens cDNA FLJ41965 fis, clone PUAEN2007350
          Length = 2611

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 392 ctgctgctgtgggcgccacg 411
           ||||||||||||||||||||
Sbjct: 770 ctgctgctgtgggcgccacg 751
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>gb|AC041040.6| Homo sapiens chromosome 8, clone RP11-513O13, complete sequence
          Length = 155301

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 392    ctgctgctgtgggcgccacg 411
              ||||||||||||||||||||
Sbjct: 121513 ctgctgctgtgggcgccacg 121532
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 291      cccgtgccggtggaccggcgtgtcgtgc 318
                ||||||||||||| |||||||| |||||
Sbjct: 11111695 cccgtgccggtgggccggcgtgacgtgc 11111722
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 291      cccgtgccggtggaccggcgtgtcgtgc 318
                |||||||||||||  |||||||||||||
Sbjct: 24372125 cccgtgccggtggctcggcgtgtcgtgc 24372152
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 291      cccgtgccggtggaccggcgtgtcgtgc 318
                ||||||||||||| |||||||| |||||
Sbjct: 24100098 cccgtgccggtgggccggcgtgacgtgc 24100125
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 138     ggcggcgcggctgctgctgtgctgcgcg 165
               ||||||||||||||||| | ||||||||
Sbjct: 2071289 ggcggcgcggctgctgccgggctgcgcg 2071262
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>dbj|AP003711.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0417G12
          Length = 163568

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 291   cccgtgccggtggaccggcgtgtcgtgc 318
             ||||||||||||| |||||||| |||||
Sbjct: 33556 cccgtgccggtgggccggcgtgacgtgc 33583
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>dbj|AP003626.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0429G06
          Length = 158321

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 291    cccgtgccggtggaccggcgtgtcgtgc 318
              ||||||||||||| |||||||| |||||
Sbjct: 109791 cccgtgccggtgggccggcgtgacgtgc 109818
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>dbj|AP004762.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0686H11
          Length = 135273

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 291    cccgtgccggtggaccggcgtgtcgtgc 318
              |||||||||||||  |||||||||||||
Sbjct: 112429 cccgtgccggtggctcggcgtgtcgtgc 112456
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>dbj|AK110374.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-165-C03, full
           insert sequence
          Length = 2914

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 291 cccgtgccggtggaccggcgtgtcgtgc 318
           |||||||||||||  |||||||||||||
Sbjct: 274 cccgtgccggtggctcggcgtgtcgtgc 301
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 132    cgtggcggcggcgcggctgc 151
              ||||||||||||||||||||
Sbjct: 171383 cgtggcggcggcgcggctgc 171402
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>gb|AF466201.1| Sorghum bicolor clone SBTXS_0032H17 putative cytochrome P450-like
             protein, putative DNA-binding protein homolog,
             TATA-binding protein, hypothetical protein M3E9.200,
             3-glucanase, K-exchanger-like protein, small heat
             shock-like protein, methionine synthase protein, putative
             far-red impaired response protein, and putative vegetative
             storage protein genes, complete cds
          Length = 100773

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 135   ggcggcggcgcggctgctgc 154
             ||||||||||||||||||||
Sbjct: 71519 ggcggcggcgcggctgctgc 71500
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>dbj|AK060497.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-G05, full
           insert sequence
          Length = 1719

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 291 cccgtgccggtggaccggcgtgtcgtgc 318
           ||||||||||||| |||||||| |||||
Sbjct: 204 cccgtgccggtgggccggcgtgacgtgc 231
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 291      cccgtgccggtggaccggcgtgtcgtgc 318
                ||||||||||||| |||||||| |||||
Sbjct: 11190884 cccgtgccggtgggccggcgtgacgtgc 11190911


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,021,522
Number of Sequences: 3902068
Number of extensions: 3021522
Number of successful extensions: 67832
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 66246
Number of HSP's gapped (non-prelim): 1583
length of query: 446
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 424
effective length of database: 17,147,199,772
effective search space: 7270412703328
effective search space used: 7270412703328
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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