ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl03f07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1RPK1_IPONI (P93194) Receptor-like protein kinase precursor (EC 2... 39 0.005
2BRL3_ARATH (Q9LJF3) Serine/threonine-protein kinase BRI1-like 3 ... 38 0.011
3RLK5_ARATH (P47735) Receptor-like protein kinase 5 precursor (EC... 37 0.018
4BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated rec... 37 0.031
5BRL1_ARATH (Q9ZWC8) Serine/threonine-protein kinase BRI1-like 1 ... 35 0.092
6BRL2_ARATH (Q9ZPS9) Serine/threonine-protein kinase BRI1-like 2 ... 34 0.16
7TMK1_ARATH (P43298) Putative receptor protein kinase TMK1 precur... 32 0.59
8EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase E... 30 2.9
9ADA1B_RAT (P15823) Alpha-1B adrenergic receptor (Alpha 1B-adreno... 28 8.6
10ENV_FIVU1 (Q03804) Env polyprotein (GP150 polyprotein) [Contains... 28 8.6
11ADA1B_MOUSE (P97717) Alpha-1B adrenergic receptor (Alpha 1B-adre... 28 8.6

>RPK1_IPONI (P93194) Receptor-like protein kinase precursor (EC 2.7.11.1)|
          Length = 1109

 Score = 39.3 bits (90), Expect = 0.005
 Identities = 18/45 (40%), Positives = 25/45 (55%)
 Frame = +2

Query: 317 ASGLDADGELLMVFRRAVTADPLGALGSWSYSDDSPCDWNGVICN 451
           A  L++DG  L+   R  T+ P     SW+ SD +PC W GV C+
Sbjct: 21  AFALNSDGAALLSLTRHWTSIPSDITQSWNASDSTPCSWLGVECD 65



to top

>BRL3_ARATH (Q9LJF3) Serine/threonine-protein kinase BRI1-like 3 precursor (EC|
           2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 3)
          Length = 1164

 Score = 38.1 bits (87), Expect = 0.011
 Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
 Frame = +2

Query: 266 MVKCVFLL-VVLALRGRGASGLDA-DGELLMVFRR-AVTADPLGALGSWSY-SDDSPCDW 433
           ++ C+ +L + +  RGR     D  D  LL  F++ ++ +DP   LG+W Y S   PC W
Sbjct: 8   LILCLLVLFLTVDSRGRRLLSDDVNDTALLTAFKQTSIKSDPTNFLGNWRYGSGRDPCTW 67

Query: 434 NGVICN 451
            GV C+
Sbjct: 68  RGVSCS 73



to top

>RLK5_ARATH (P47735) Receptor-like protein kinase 5 precursor (EC 2.7.11.1)|
          Length = 999

 Score = 37.4 bits (85), Expect = 0.018
 Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
 Frame = +2

Query: 266 MVKCVFLLVVLALRGRGASGLDADGELLMVFRRAVTADPLGALGSWSYSDD-SPCDWNGV 442
           M+ C+ LL+ L+     +  L+ D  +L   +  ++ DP  +L SWS ++D +PC W GV
Sbjct: 1   MLYCLILLLCLSSTYLPSLSLNQDATILRQAKLGLS-DPAQSLSSWSDNNDVTPCKWLGV 59

Query: 443 ICN 451
            C+
Sbjct: 60  SCD 62



to top

>BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1|
           precursor (EC 2.7.11.1) (BRI1-associated receptor kinase
           1) (Somatic embryogenesis receptor-like kinase 3)
          Length = 615

 Score = 36.6 bits (83), Expect = 0.031
 Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
 Frame = +2

Query: 266 MVKCVFLLVV---LALRGRGASGLDADGELLMVFRRAVTADPLGALGSWSYSDDSPCDWN 436
           M+ C F L++   L LR  G    +A+G+ L   + ++ ADP   L SW  +  +PC W 
Sbjct: 6   MIPCFFWLILVLDLVLRVSG----NAEGDALSALKNSL-ADPNKVLQSWDATLVTPCTWF 60

Query: 437 GVICN 451
            V CN
Sbjct: 61  HVTCN 65



to top

>BRL1_ARATH (Q9ZWC8) Serine/threonine-protein kinase BRI1-like 1 precursor (EC|
           2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 1)
          Length = 1166

 Score = 35.0 bits (79), Expect = 0.092
 Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
 Frame = +2

Query: 266 MVKCVFLL-VVLALRGRGASGLDA-DGELLMVFRR-AVTADPLGALGSWSY-SDDSPCDW 433
           ++ C F   +V+ + G+     D  +  LL+ F++ +V +DP   LG+W Y S    C W
Sbjct: 9   LILCFFTTSLVMGIHGKHLINDDFNETALLLAFKQNSVKSDPNNVLGNWKYESGRGSCSW 68

Query: 434 NGVICN 451
            GV C+
Sbjct: 69  RGVSCS 74



to top

>BRL2_ARATH (Q9ZPS9) Serine/threonine-protein kinase BRI1-like 2 precursor (EC|
           2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 2)
           (Protein VASCULAR HIGHWAY 1)
          Length = 1143

 Score = 34.3 bits (77), Expect = 0.16
 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
 Frame = +2

Query: 269 VKCVFLLVVLALRGRG-ASGLDADGELLMVFRRAVTADPLGALGSWSYSDDSPCDWNGVI 445
           +  +FLL  L+       S L  D   L+ F+  +  DP   L +WS    SPC ++GV 
Sbjct: 16  ISFIFLLTHLSQSSSSDQSSLKTDSLSLLSFKTMIQDDPNNILSNWS-PRKSPCQFSGVT 74

Query: 446 CNG 454
           C G
Sbjct: 75  CLG 77



to top

>TMK1_ARATH (P43298) Putative receptor protein kinase TMK1 precursor (EC|
           2.7.11.1)
          Length = 942

 Score = 32.3 bits (72), Expect = 0.59
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = +2

Query: 320 SGLDADGELLMVFRRAVTADPLGALGSWSYSDDSPCDWNGVICNG 454
           S  D+DG+L  +     + +P  + G   +SD  PC W  ++C G
Sbjct: 21  SKADSDGDLSAMLSLKKSLNPPSSFG---WSDPDPCKWTHIVCTG 62



to top

>EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase EXS precursor|
           (EC 2.7.11.1) (Extra sporogenous cells protein) (EXCESS
           MICROSPOROCYTES1 protein)
          Length = 1192

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = +2

Query: 278 VFLLVVLALRGRGASGLDADGELLMVFRRAVTADPLGALGSWSYSDD-SPCDWNGVIC 448
           +FL +  +        L ++   L+ F+R++    L  L SW+ S   S CDW GV C
Sbjct: 7   LFLFLFFSFSSSAIVDLSSETTSLISFKRSLENPSL--LSSWNVSSSASHCDWVGVTC 62



to top

>ADA1B_RAT (P15823) Alpha-1B adrenergic receptor (Alpha 1B-adrenoceptor)|
           (Alpha 1B-adrenoreceptor)
          Length = 515

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +1

Query: 190 SFVRSFGCNCNGGQEARRR 246
           +F+R  GC C GG+  RRR
Sbjct: 358 AFMRILGCQCRGGRRRRRR 376



to top

>ENV_FIVU1 (Q03804) Env polyprotein (GP150 polyprotein) [Contains: Major|
           glycoprotein GP100; Glycoprotein GP36]
          Length = 856

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = +2

Query: 341 ELLMVFRRAVTADPLGALGSWSYSDDSPCDWNGVICN 451
           +L+M F      +     G+WS   D P +W  + CN
Sbjct: 512 DLIMHFNMTKAVEMYNIAGNWSCMSDLPTEWGYMNCN 548



to top

>ADA1B_MOUSE (P97717) Alpha-1B adrenergic receptor (Alpha 1B-adrenoceptor)|
           (Alpha 1B-adrenoreceptor)
          Length = 514

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +1

Query: 190 SFVRSFGCNCNGGQEARRR 246
           +F+R  GC C GG+  RRR
Sbjct: 357 AFMRILGCQCRGGRRRRRR 375


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,033,653
Number of Sequences: 219361
Number of extensions: 574598
Number of successful extensions: 1650
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1648
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top