ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl03f06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1IRS2_MOUSE (P81122) Insulin receptor substrate 2 (IRS-2) (4PS) 30 2.6
2Y091_NPVOP (O10341) Hypothetical 29.3 kDa protein (ORF92) 28 9.7
3GUN1_ACICE (P54583) Endoglucanase E1 precursor (EC 3.2.1.4) (End... 28 9.7

>IRS2_MOUSE (P81122) Insulin receptor substrate 2 (IRS-2) (4PS)|
          Length = 1321

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +2

Query: 2   THPRRQRQTPARADGKLDTYAMERVALLRTSGR 100
           T P RQRQ P  +   LD Y + R     +SGR
Sbjct: 575 TTPARQRQVPQPSSASLDEYTLMRATFSGSSGR 607



to top

>Y091_NPVOP (O10341) Hypothetical 29.3 kDa protein (ORF92)|
          Length = 279

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = +3

Query: 3   PTPAGKGKPQPEPTASWTPTP 65
           PTP     P P PT S TPTP
Sbjct: 117 PTPTPSPTPSPTPTPSPTPTP 137



to top

>GUN1_ACICE (P54583) Endoglucanase E1 precursor (EC 3.2.1.4)|
           (Endo-1,4-beta-glucanase E1) (Cellulase E1)
           (Endocellulase E1)
          Length = 562

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +3

Query: 3   PTPAGKGKPQPEPTASWTPTP 65
           P+P+    P P P+AS TPTP
Sbjct: 409 PSPSVSPSPSPSPSASRTPTP 429


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,817,192
Number of Sequences: 219361
Number of extensions: 439396
Number of successful extensions: 2762
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2699
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3304846491
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top