Clone Information

BLAST Search Result

Clone Name	bastl03e10
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	IF2_STRAW (Q82K53) Translation initiation factor IF-2	37	0.025
2	MDC1_PANTR (Q7YR40) Mediator of DNA damage checkpoint protein 1	33	0.36
3	MDC1_HUMAN (Q14676) Mediator of DNA damage checkpoint protein 1 ...	33	0.36
4	WASL_BOVIN (Q95107) Neural Wiskott-Aldrich syndrome protein (N-W...	33	0.36
5	RIMS1_RAT (Q9JIR4) Regulating synaptic membrane exocytosis prote...	32	0.61
6	ELN_MOUSE (P54320) Elastin precursor (Tropoelastin)	32	0.61
7	TWST1_EULFU (Q8MIF3) Twist-related protein 1	32	0.61
8	HXA3_MOUSE (P02831) Homeobox protein Hox-A3 (Hox-1.5) (MO-10)	32	0.79
9	FILA_HUMAN (P20930) Filaggrin	32	0.79
10	HOL3_HOLDI (Q25055) Holotricin-3 precursor	32	1.0
11	OLEO3_MAIZE (P21641) Oleosin Zm-II (Oleosin 18 kDa) (Lipid body-...	32	1.0
12	GP1_CHLRE (Q9FPQ6) Vegetative cell wall protein gp1 precursor (H...	31	1.3
13	ATRN_MOUSE (Q9WU60) Attractin precursor (Mahogany protein)	31	1.3
14	DHN2_PEA (P28640) Dehydrin DHN2	31	1.8
15	YT35_STRFR (P20186) Hypothetical 35.5 kDa protein in transposon ...	31	1.8
16	SOX3_MOUSE (P53784) Transcription factor SOX-3	31	1.8
17	DPOA2_RAT (O89043) DNA polymerase alpha subunit B (DNA polymeras...	31	1.8
18	GP135_HUMAN (Q8IZ08) Probable G-protein coupled receptor 135	30	2.3
19	FOXD1_MOUSE (Q61345) Forkhead box protein D1 (Forkhead-related p...	30	2.3
20	SSY23_ORYSA (Q5DWW9) Soluble starch synthase 2-3, chloroplast pr...	30	2.3
21	IER5_HUMAN (Q5VY09) Immediate early response gene 5 protein	30	2.3
22	MDC1_MACMU (Q5TM68) Mediator of DNA damage checkpoint protein 1	30	2.3
23	COL19_CAEEL (P18835) Cuticle collagen 19 precursor	30	2.3
24	WASL_RAT (O08816) Neural Wiskott-Aldrich syndrome protein (N-WASP)	30	2.3
25	WASL_MOUSE (Q91YD9) Neural Wiskott-Aldrich syndrome protein (N-W...	30	2.3
26	TWST1_CALJA (Q8MIH1) Twist-related protein 1	30	2.3
27	IF2_LEIXX (Q6AG49) Translation initiation factor IF-2	30	2.3
28	WASL_HUMAN (O00401) Neural Wiskott-Aldrich syndrome protein (N-W...	30	2.3
29	VNUA_PRVKA (P33485) Probable nuclear antigen	30	3.0
30	PKHA4_HUMAN (Q9H4M7) Pleckstrin homology domain-containing famil...	30	3.0
31	CD5R2_MOUSE (O35926) Cyclin-dependent kinase 5 activator 2 precu...	30	3.0
32	KCNKF_HUMAN (Q9H427) Potassium channel subfamily K member 15 (Ac...	30	3.0
33	RP3A_BOVIN (Q06846) Rabphilin-3A (Exophilin-1)	30	3.0
34	ADAM8_HUMAN (P78325) ADAM 8 precursor (EC 3.4.24.-) (A disintegr...	30	3.0
35	MYSC_ACACA (P10569) Myosin IC heavy chain	30	3.9
36	ZCHC3_HUMAN (Q9NUD5) Zinc finger CCHC domain-containing protein 3	30	3.9
37	HXA11_HUMAN (P31270) Homeobox protein Hox-A11 (Hox-1I)	30	3.9
38	DPOA2_HUMAN (Q14181) DNA polymerase alpha subunit B (DNA polymer...	30	3.9
39	RL15_CHLTR (P28534) 50S ribosomal protein L15	30	3.9
40	AGO1_ARATH (O04379) Argonaute protein	30	3.9
41	WASP_MOUSE (P70315) Wiskott-Aldrich syndrome protein homolog (WASp)	30	3.9
42	RIN3_MOUSE (P59729) Ras and Rab interactor 3 (Ras interaction/in...	30	3.9
43	CLPB_MOUSE (Q60649) Caseinolytic peptidase B protein homolog (Su...	30	3.9
44	BRD4_HUMAN (O60885) Bromodomain-containing protein 4 (HUNK1 prot...	30	3.9
45	WIF1_DROME (Q9W3W5) Protein shifted precursor (WIF-1-like protein)	29	5.1
46	KCAB3_HUMAN (O43448) Voltage-gated potassium channel beta-3 subu...	29	5.1
47	HXA3_HUMAN (O43365) Homeobox protein Hox-A3 (Hox-1E)	29	5.1
48	ZN580_HUMAN (Q9UK33) Zinc finger protein 580 (LDL-induced EC pro...	29	5.1
49	TWST1_GORGO (Q8MI06) Twist-related protein 1	29	5.1
50	MCL1_CANFA (Q8HYS5) Induced myeloid leukemia cell differentiatio...	29	5.1
51	RL15_CHLMU (Q9PJN0) 50S ribosomal protein L15	29	5.1
52	CD99_MOUSE (Q8VCN6) CD99 antigen precursor (Paired immunoglobin-...	29	5.1
53	ZN513_HUMAN (Q8N8E2) Zinc finger protein 513	29	5.1
54	PKND_CHLMU (Q9PK92) Serine/threonine-protein kinase pknD (EC 2.7...	29	5.1
55	BRC4_DROME (Q24206) Broad-complex core-protein isoform 6	29	6.7
56	GATD_METMA (Q8PUM7) Glutamyl-tRNA(Gln) amidotransferase subunit ...	29	6.7
57	GAR1_CANGA (Q6FSB0) H/ACA ribonucleoprotein complex subunit 1 (s...	29	6.7
58	HXD3_CHICK (O93353) Homeobox protein Hox-D3	29	6.7
59	HXA3_CHICK (Q7T3J5) Homeobox protein Hox-A3	29	6.7
60	FHOD1_MOUSE (Q6P9Q4) FH1/FH2 domain-containing protein (Formin h...	29	6.7
61	DHN1_PEA (P28639) Dehydrin DHN1	29	6.7
62	V70K_TYMVA (P20131) 69 kDa protein	29	6.7
63	SOX8_MOUSE (Q04886) Transcription factor SOX-8	29	6.7
64	RL3_PSEAE (Q9HWD5) 50S ribosomal protein L3	29	6.7
65	TWST1_MOUSE (P26687) Twist-related protein 1 (M-twist)	29	6.7
66	PNRC2_MOUSE (Q9CR73) Proline-rich nuclear receptor coactivator 2	29	6.7
67	KRA61_RABIT (Q02957) Keratin, glycine/tyrosine-rich of hair	29	6.7
68	IER5_MOUSE (O89113) Immediate early response gene 5 protein	29	6.7
69	TRPF_ASHGO (Q757J9) N-(5'-phosphoribosyl)anthranilate isomerase ...	29	6.7
70	SF3B4_HUMAN (Q15427) Splicing factor 3B subunit 4 (Spliceosome-a...	29	6.7
71	CI004_HUMAN (Q9P0K9) Protein C9orf4 (Brain protein CG-6)	29	6.7
72	IF2_MYCLE (Q9Z5I9) Translation initiation factor IF-2	28	8.7
73	RHLE_ECOLI (P25888) Putative ATP-dependent RNA helicase rhlE (EC...	28	8.7
74	KTNA1_STRPU (O61577) Katanin p60 ATPase-containing subunit (EC 3...	28	8.7
75	HORN_HUMAN (Q86YZ3) Hornerin	28	8.7
76	DHN3_PEA (P28641) Dehydrin DHN3	28	8.7
77	HXA11_MOUSE (P31311) Homeobox protein Hox-A11 (Hox-1.9)	28	8.7
78	SPEG_HUMAN (Q15772) Striated muscle preferentially expressed pro...	28	8.7
79	FOG1_HUMAN (Q8IX07) Zinc finger protein ZFPM1 (Zinc finger prote...	28	8.7
80	WSP1_SCHPO (O36027) Wiskott-Aldrich syndrome homolog protein 1	28	8.7
81	PG54_MYCTU (O53553) Hypothetical PE-PGRS family protein PE_PGRS5...	28	8.7
82	SSB_SALTY (P0A2F6) Single-stranded DNA-binding protein (SSB) (He...	28	8.7
83	SSB_SALTI (P0A2F7) Single-stranded DNA-binding protein (SSB) (He...	28	8.7
84	TNFL6_FELCA (Q861W5) Tumor necrosis factor ligand superfamily me...	28	8.7

>IF2_STRAW (Q82K53) Translation initiation factor IF-2|
          Length = 1046

 Score = 37.0 bits (84), Expect = 0.025
 Identities = 28/81 (34%), Positives = 33/81 (40%)
 Frame = +2

Query: 164 GLARRGDDDVHGGPRRVGHQLDQAGHGYSPRPRRGEVSTGGAAASGTDLGGRGGAQEPRA 343
           G  R G     GGPR  G      G   +PRP+      GG   +    GG GGA   R 
Sbjct: 237 GAPRPGGAGAPGGPRPQG----AGGQDRAPRPQ------GGPGGAPRPQGGPGGA---RP 283

Query: 344 VQQGVRRPLLPQESAAAGANR 406
              G+ RP  P+   A G NR
Sbjct: 284 TPGGMPRPQAPRPGGAPGGNR 304

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>MDC1_PANTR (Q7YR40) Mediator of DNA damage checkpoint protein 1|
          Length = 2171

 Score = 33.1 bits (74), Expect = 0.36
 Identities = 24/76 (31%), Positives = 30/76 (39%), Gaps = 6/76 (7%)
 Frame = +2

Query: 185  DDVHGGPRRVGHQLDQAGHGYSPRPRRGEVS------TGGAAASGTDLGGRGGAQEPRAV 346
            D   G P   G   DQ G   SP P  G  +      T     SG+  GGRG    PR  
Sbjct: 945  DTQRGEPE--GGSQDQKGQASSPIPEPGVEAGDLPGPTSAPVTSGSQSGGRGSPVSPRRH 1002

Query: 347  QQGVRRPLLPQESAAA 394
            Q+G+    +P    A+
Sbjct: 1003 QKGLLNCKMPPAEKAS 1018

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>MDC1_HUMAN (Q14676) Mediator of DNA damage checkpoint protein 1 (Nuclear factor|
            with BRCT domains 1)
          Length = 2089

 Score = 33.1 bits (74), Expect = 0.36
 Identities = 24/76 (31%), Positives = 30/76 (39%), Gaps = 6/76 (7%)
 Frame = +2

Query: 185  DDVHGGPRRVGHQLDQAGHGYSPRPRRGEVS------TGGAAASGTDLGGRGGAQEPRAV 346
            D   G P   G   DQ G   SP P  G  +      T     SG+  GGRG    PR  
Sbjct: 945  DTQRGEPE--GGSQDQKGQASSPTPEPGVGAGDLPGPTSAPVPSGSQSGGRGSPVSPRRH 1002

Query: 347  QQGVRRPLLPQESAAA 394
            Q+G+    +P    A+
Sbjct: 1003 QKGLLNCKMPPAEKAS 1018

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>WASL_BOVIN (Q95107) Neural Wiskott-Aldrich syndrome protein (N-WASP)|
          Length = 505

 Score = 33.1 bits (74), Expect = 0.36
 Identities = 19/36 (52%), Positives = 19/36 (52%)
 Frame = -3

Query: 342 ARGSWAPPRPPRSVPEAAAPPVETSPRRGRGEYPCP 235
           ARG  APP PP   P AA PP   S R G G  P P
Sbjct: 304 ARGRGAPPPPPSRAPTAAPPPPPPS-RPGVGAPPPP 338



 Score = 31.6 bits (70), Expect = 1.0
 Identities = 16/41 (39%), Positives = 18/41 (43%)
 Frame = -3

Query: 354 PCCTARGSWAPPRPPRSVPEAAAPPVETSPRRGRGEYPCPA 232
           P  +  GS APP PP   P    PP    P  G  + P PA
Sbjct: 363 PPLSVSGSVAPPPPPPPPPPPGPPPPPGLPSDGDHQVPTPA 403



 Score = 30.0 bits (66), Expect = 3.0
 Identities = 19/46 (41%), Positives = 22/46 (47%)
 Frame = -3

Query: 372 RRGRRTPCCTARGSWAPPRPPRSVPEAAAPPVETSPRRGRGEYPCP 235
           RR    P   +RG   PP PP   P ++ PP    P RGRG  P P
Sbjct: 273 RRQAPPPPPPSRGGPPPPPPP---PHSSGPP--PPPARGRGAPPPP 313

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>RIMS1_RAT (Q9JIR4) Regulating synaptic membrane exocytosis protein 1|
           (Rab3-interacting molecule 1) (RIM 1)
          Length = 1615

 Score = 32.3 bits (72), Expect = 0.61
 Identities = 21/45 (46%), Positives = 24/45 (53%)
 Frame = -3

Query: 399 APAAADSWGRRGRRTPCCTARGSWAPPRPPRSVPEAAAPPVETSP 265
           A AAA +    G+R P  TAR S  PP  PR+   AA PP E  P
Sbjct: 422 AAAAAPAEATAGKRAPA-TARVS--PPESPRARAAAAQPPTEHGP 463

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>ELN_MOUSE (P54320) Elastin precursor (Tropoelastin)|
          Length = 860

 Score = 32.3 bits (72), Expect = 0.61
 Identities = 25/69 (36%), Positives = 27/69 (39%)
 Frame = +2

Query: 191 VHGGPRRVGHQLDQAGHGYSPRPRRGEVSTGGAAASGTDLGGRGGAQEPRAVQQGVRRPL 370
           V G P  VG      G G    P  G V  GG    G   GG GGA  P A +   +   
Sbjct: 545 VGGVPGGVGVGGIPGGVGVGGVP--GGVGPGGVTGIGAGPGGLGGAGSPAAAKSAAKAAA 602

Query: 371 LPQESAAAG 397
             Q  AAAG
Sbjct: 603 KAQYRAAAG 611

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>TWST1_EULFU (Q8MIF3) Twist-related protein 1|
          Length = 198

 Score = 32.3 bits (72), Expect = 0.61
 Identities = 19/60 (31%), Positives = 23/60 (38%)
 Frame = +2

Query: 182 DDDVHGGPRRVGHQLDQAGHGYSPRPRRGEVSTGGAAASGTDLGGRGGAQEPRAVQQGVR 361
           DD +         Q   +G     + R    S GG A  G   GG GG  EP +  QG R
Sbjct: 14  DDSLSNSEEEPDRQQPPSGKRGGRKRRSSRRSAGGGAGPGGAAGGVGGGDEPGSPAQGKR 73

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>HXA3_MOUSE (P02831) Homeobox protein Hox-A3 (Hox-1.5) (MO-10)|
          Length = 443

 Score = 32.0 bits (71), Expect = 0.79
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = -3

Query: 324 PPRPPRSVPEAAAPPVETSPRRGRGEYPCPA 232
           PP+PP   P A  PP   SP +     P PA
Sbjct: 109 PPQPPAPTPAAPPPPSSVSPPQSANSNPTPA 139

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>FILA_HUMAN (P20930) Filaggrin|
          Length = 4061

 Score = 32.0 bits (71), Expect = 0.79
 Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 13/85 (15%)
 Frame = +2

Query: 194  HGGPRRVGHQLDQAGHGYS------PRPRRGEVSTGGAAASG-----TDLGGRGGAQEPR 340
            HG      H  D+AGHG+S         R  E S+GG AAS      +  G R G++  +
Sbjct: 3249 HGSRHPRSHHEDRAGHGHSADRSRQSGTRHAETSSGGQAASSHEQARSSPGERHGSRHQQ 3308

Query: 341  AVQQGVRRPLLP--QESAAAGANRH 409
            +     R   +P  Q S+A   +RH
Sbjct: 3309 SADSS-RHSGIPRGQASSAVRDSRH 3332



 Score = 30.8 bits (68), Expect = 1.8
 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 6/44 (13%)
 Frame = +2

Query: 194  HGGPRRVGHQLDQAGHGYSPR------PRRGEVSTGGAAASGTD 307
            HG      HQ D+A HG+S         R  E S+GG AAS  +
Sbjct: 1628 HGSRNPRSHQEDRASHGHSAESSRQSGTRHAETSSGGQAASSQE 1671



 Score = 30.4 bits (67), Expect = 2.3
 Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 11/78 (14%)
 Frame = +2

Query: 194  HGGPRRVGHQLDQAGHGYSPRPRR------GEVSTGGAAASG-----TDLGGRGGAQEPR 340
            HG      H  D+AGHG+S    R       E S+GG AAS      +  G R G++  +
Sbjct: 980  HGSRHPRSHHEDRAGHGHSADSSRQSGTPHAETSSGGQAASSHEQARSSPGERHGSRHQQ 1039

Query: 341  AVQQGVRRPLLPQESAAA 394
            +     R   +P+  A++
Sbjct: 1040 SADSS-RHSGIPRRQASS 1056

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>HOL3_HOLDI (Q25055) Holotricin-3 precursor|
          Length = 104

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 19/49 (38%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
 Frame = +2

Query: 194 HGGPRRVGHQLDQAG-HGYSPRPRRGEVSTGGAAASGTDLGGRGGAQEP 337
           HGG    GH   Q G HG+ P    G    GG    G   GG GG   P
Sbjct: 31  HGGGHGGGHGNGQGGGHGHGPGGGFGGGHGGGHGGGGRGGGGSGGGGSP 79

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>OLEO3_MAIZE (P21641) Oleosin Zm-II (Oleosin 18 kDa) (Lipid body-associated|
           protein L2)
          Length = 187

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
 Frame = +2

Query: 173 RRGDDDVHGGPRRVGHQLDQAGH-----GYSPRPRRGEVSTGGAAASGTDLGGRGGA 328
           +R  D V    RR+     QAGH     G + + R  E  TGG A +G   GGR  +
Sbjct: 131 QRTPDYVEEARRRMAEAAAQAGHKTAQAGQAIQGRAQEAGTGGGAGAGAGGGGRASS 187

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>GP1_CHLRE (Q9FPQ6) Vegetative cell wall protein gp1 precursor|
           (Hydroxyproline-rich glycoprotein 1)
          Length = 555

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 17/40 (42%), Positives = 18/40 (45%)
 Frame = -3

Query: 354 PCCTARGSWAPPRPPRSVPEAAAPPVETSPRRGRGEYPCP 235
           P   A  S APP PP   P + APPV  SP       P P
Sbjct: 186 PPSPAPPSPAPPVPPSPAPPSPAPPVPPSPAPPSPPSPAP 225



 Score = 28.9 bits (63), Expect = 6.7
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = -3

Query: 357 TPCCTARGSWAPPRPPRSVPEAAAPPVETSPRRGRGEYPCPA 232
           +P   +  S APP PP   P + +PP   SP       P PA
Sbjct: 214 SPAPPSPPSPAPPSPPSPAPPSPSPPAPPSPVPPSPAPPSPA 255



 Score = 28.9 bits (63), Expect = 6.7
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = -3

Query: 327 APPRPPRSVPEAAAPPVETSPRRGRGEYPCP 235
           APP PP   P + +PPV  SP       P P
Sbjct: 143 APPLPPSPAPPSPSPPVPPSPSPPVPPSPAP 173



 Score = 28.9 bits (63), Expect = 6.7
 Identities = 15/41 (36%), Positives = 19/41 (46%)
 Frame = -3

Query: 357 TPCCTARGSWAPPRPPRSVPEAAAPPVETSPRRGRGEYPCP 235
           +P   A  S +PP PP   P + APP+  SP       P P
Sbjct: 120 SPPSPAPPSPSPPAPPSPSPPSPAPPLPPSPAPPSPSPPVP 160



 Score = 28.5 bits (62), Expect = 8.7
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = -3

Query: 327 APPRPPRSVPEAAAPPVETSPRRGRGEYPCP 235
           +PP PP   P + APPV  SP       P P
Sbjct: 182 SPPVPPSPAPPSPAPPVPPSPAPPSPAPPVP 212



 Score = 28.5 bits (62), Expect = 8.7
 Identities = 15/40 (37%), Positives = 17/40 (42%)
 Frame = -3

Query: 354 PCCTARGSWAPPRPPRSVPEAAAPPVETSPRRGRGEYPCP 235
           P   A  S APP PP   P + +PP   SP       P P
Sbjct: 108 PPSPAPPSPAPPSPPSPAPPSPSPPAPPSPSPPSPAPPLP 147

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>ATRN_MOUSE (Q9WU60) Attractin precursor (Mahogany protein)|
          Length = 1428

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 5/37 (13%)
 Frame = -3

Query: 375 GRRGRRTPCCTARGSWAP-PRP----PRSVPEAAAPP 280
           GR+GR+   CTA G+W P PR     PR +  A  PP
Sbjct: 26  GRKGRQHRPCTATGAWRPGPRARLCLPRVLSRALPPP 62

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>DHN2_PEA (P28640) Dehydrin DHN2|
          Length = 232

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = +2

Query: 242 GYSPRPRRGEVSTGGAAASGTDLGGRGGAQEPRAVQQGVRRPLL 373
           GY  +P  G  +TG    +GT  GG G  +  R    G ++ ++
Sbjct: 80  GYGTKPEYGSTNTGSGYGTGTGYGGSGTTEYVREEHHGDKKGVM 123

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>YT35_STRFR (P20186) Hypothetical 35.5 kDa protein in transposon Tn4556|
          Length = 348

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 22/50 (44%), Positives = 26/50 (52%), Gaps = 7/50 (14%)
 Frame = -3

Query: 360 RTPCCTARGSWAP-PRPPRSV---PEAAAPPVETS---PRRGRGEYPCPA 232
           R  C TA GS  P PRPP S    P+AAAP   ++   PRR     P P+
Sbjct: 221 RAGCPTAAGSLLPAPRPPASSASSPQAAAPAAPSATRLPRRTTPSAPRPS 270



 Score = 29.3 bits (64), Expect = 5.1
 Identities = 23/58 (39%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
 Frame = -3

Query: 399 APAAADSWGRRGRRTPCCTARGSWAPPRPPRSVPEAAAPPVET--SPRRGRGEYPCPA 232
           A  AA S  R  RRT     R S  P RPP  +P A  PP  T  +PR        PA
Sbjct: 248 AAPAAPSATRLPRRTTPSAPRPSSRPARPP--IPAARPPPRRTPGTPRPAAARARAPA 303

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>SOX3_MOUSE (P53784) Transcription factor SOX-3|
          Length = 375

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 21/61 (34%), Positives = 24/61 (39%)
 Frame = +2

Query: 218 HQLDQAGHGYSPRPRRGEVSTGGAAASGTDLGGRGGAQEPRAVQQGVRRPLLPQESAAAG 397
           H+ D AG  YSP    G  S   AAA+     G GG     A          P  +AAA 
Sbjct: 229 HRYDMAGLQYSPMMPPGAQSYMNAAAAAAAASGYGGMAPSAAAAAAAAYGQQPATAAAAA 288

Query: 398 A 400
           A
Sbjct: 289 A 289

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>DPOA2_RAT (O89043) DNA polymerase alpha subunit B (DNA polymerase alpha 70|
           kDa subunit) (DNA polymerase subunit II)
          Length = 600

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 17/42 (40%), Positives = 19/42 (45%)
 Frame = +2

Query: 245 YSPRPRRGEVSTGGAAASGTDLGGRGGAQEPRAVQQGVRRPL 370
           YS R  RGEV T   +A G    GRGG+        G   PL
Sbjct: 161 YSSRTNRGEVVTTFGSAQGVSWSGRGGSGSISLKVMGYPEPL 202

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>GP135_HUMAN (Q8IZ08) Probable G-protein coupled receptor 135|
          Length = 494

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 28/89 (31%), Positives = 36/89 (40%), Gaps = 6/89 (6%)
 Frame = +2

Query: 131 PRQRRPKSS--LLGLARRGDDDVHGGPRRVGHQLDQAGHGYSP--RPRRGEVS--TGGAA 292
           P+  RP +S  LLG    G     G P         A   +S       G +S  +GG  
Sbjct: 4   PQPPRPPASMALLGSQHSGAPSAAGPPGGTSSAATAAVLSFSTVATAALGNLSDASGGGT 63

Query: 293 ASGTDLGGRGGAQEPRAVQQGVRRPLLPQ 379
           A+    GG GG+   R     VRRPL P+
Sbjct: 64  AAAPGGGGLGGSGAAREAGAAVRRPLGPE 92

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>FOXD1_MOUSE (Q61345) Forkhead box protein D1 (Forkhead-related protein FKHL8)|
           (Forkhead-related transcription factor 4) (FREAC-4)
           (Brain factor-2) (HFH-BF-2)
          Length = 456

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 26/83 (31%), Positives = 32/83 (38%), Gaps = 10/83 (12%)
 Frame = +2

Query: 119 KFPNPRQRRPKS-----SLLGLARRGDDDVHGGPRRVGHQLDQAGHGYSPRPRRGE---- 271
           + P+  QRR +S      L  L    DDD+    R        A  G +P P  G     
Sbjct: 48  RLPSSAQRRRRSYAGEDDLEDLEEEDDDDLLLASRPAA---SPAPPGPAPAPGTGSGGCS 104

Query: 272 -VSTGGAAASGTDLGGRGGAQEP 337
               GG A  GT  G  GGA+ P
Sbjct: 105 GAGAGGGAGGGTGAGTGGGAKNP 127

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>SSY23_ORYSA (Q5DWW9) Soluble starch synthase 2-3, chloroplast precursor (EC|
           2.4.1.21) (Soluble starch synthase II-3) (Starch
           synthase IIa)
          Length = 810

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 29/100 (29%), Positives = 39/100 (39%), Gaps = 7/100 (7%)
 Frame = +2

Query: 125 PNPRQRRPKSSLLGLARRGDD-DVHGGPRRVGHQLDQ-----AGHGYSPRPRRGEVSTGG 286
           P P + RP+    G+ RR DD +      R G   D+     +G    PR RRG V    
Sbjct: 53  PPPPRPRPRRRDAGVVRRADDGENEAAVERAGEDDDEEEEFSSGAWQPPRSRRGGVGKVL 112

Query: 287 AAASGTDLGGRGGAQEPRAVQQGVRRPL-LPQESAAAGAN 403
                    GR G+    A  +G   P   P + AA+  N
Sbjct: 113 KRRGTVPPVGRYGSGGDAARVRGAAAPAPAPTQDAASSKN 152

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>IER5_HUMAN (Q5VY09) Immediate early response gene 5 protein|
          Length = 327

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 21/62 (33%), Positives = 23/62 (37%), Gaps = 5/62 (8%)
 Frame = -3

Query: 405 RFAPAAADSWG-----RRGRRTPCCTARGSWAPPRPPRSVPEAAAPPVETSPRRGRGEYP 241
           R A   A  WG      R  R PC    G   PP  P + P AA      +PR    E P
Sbjct: 153 REAEGTAGGWGVFPEVSRAARRPCGCPLGGEDPPGTPAATPRAACC---CAPRPAEDEPP 209

Query: 240 CP 235
            P
Sbjct: 210 AP 211

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>MDC1_MACMU (Q5TM68) Mediator of DNA damage checkpoint protein 1|
          Length = 2173

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 23/75 (30%), Positives = 30/75 (40%), Gaps = 6/75 (8%)
 Frame = +2

Query: 188  DVHGGPRRVGHQLDQAGHGYSPRPRRGEVS------TGGAAASGTDLGGRGGAQEPRAVQ 349
            D   G  + G Q DQ G   SP    G  +      T     SG+  GGRG    PR  Q
Sbjct: 947  DAQRGEPKGGSQ-DQKGQASSPTSEPGVGAGDLPGPTSAPVPSGSQSGGRGSPVSPRRHQ 1005

Query: 350  QGVRRPLLPQESAAA 394
            +G+    +P    A+
Sbjct: 1006 KGLLNCKMPPTEKAS 1020

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>COL19_CAEEL (P18835) Cuticle collagen 19 precursor|
          Length = 289

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 27/82 (32%), Positives = 29/82 (35%), Gaps = 2/82 (2%)
 Frame = +2

Query: 164 GLARRGDDDVHGGPRRVGHQLDQAGHGYSPRPRRGEVSTGGAAASGTDLG--GRGGAQEP 337
           G  RRG     GGP   G Q D    G + RP  G     G   +    G  GR G Q P
Sbjct: 166 GNGRRGPPGPVGGPGEQGPQGDAGRPGAAGRP--GPAGPRGEPGTEYKPGQPGRPGPQGP 223

Query: 338 RAVQQGVRRPLLPQESAAAGAN 403
           R        P  P     AG N
Sbjct: 224 RGETGPAGNPGAPGNDGEAGKN 245

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>WASL_RAT (O08816) Neural Wiskott-Aldrich syndrome protein (N-WASP)|
          Length = 501

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 13/21 (61%), Positives = 13/21 (61%)
 Frame = -3

Query: 342 ARGSWAPPRPPRSVPEAAAPP 280
           ARG  APP PP   P AA PP
Sbjct: 301 ARGRGAPPPPPSRAPTAAPPP 321



 Score = 30.0 bits (66), Expect = 3.0
 Identities = 19/46 (41%), Positives = 22/46 (47%)
 Frame = -3

Query: 372 RRGRRTPCCTARGSWAPPRPPRSVPEAAAPPVETSPRRGRGEYPCP 235
           RR    P   +RG   PP PP   P ++ PP    P RGRG  P P
Sbjct: 270 RRQAPPPPPPSRGGPPPPPPP---PHSSGPP--PPPARGRGAPPPP 310

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>WASL_MOUSE (Q91YD9) Neural Wiskott-Aldrich syndrome protein (N-WASP)|
          Length = 501

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 13/21 (61%), Positives = 13/21 (61%)
 Frame = -3

Query: 342 ARGSWAPPRPPRSVPEAAAPP 280
           ARG  APP PP   P AA PP
Sbjct: 301 ARGRGAPPPPPSRAPTAAPPP 321



 Score = 30.0 bits (66), Expect = 3.0
 Identities = 14/35 (40%), Positives = 16/35 (45%)
 Frame = -3

Query: 336 GSWAPPRPPRSVPEAAAPPVETSPRRGRGEYPCPA 232
           GS APP PP   P    PP    P  G  + P P+
Sbjct: 365 GSTAPPPPPPPPPPPGPPPPPGLPSDGDHQVPAPS 399



 Score = 30.0 bits (66), Expect = 3.0
 Identities = 19/46 (41%), Positives = 22/46 (47%)
 Frame = -3

Query: 372 RRGRRTPCCTARGSWAPPRPPRSVPEAAAPPVETSPRRGRGEYPCP 235
           RR    P   +RG   PP PP   P ++ PP    P RGRG  P P
Sbjct: 270 RRQAPPPPPPSRGGPPPPPPP---PHSSGPP--PPPARGRGAPPPP 310

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>TWST1_CALJA (Q8MIH1) Twist-related protein 1|
          Length = 203

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 20/61 (32%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
 Frame = +2

Query: 182 DDDVHGGPRRVGHQLDQAGHGYSPRPRRGEVSTGGAAASGTDLGGR-GGAQEPRAVQQGV 358
           DD +         Q  Q+G     + R    S GG A  G   GG  GG  EP +  QG 
Sbjct: 14  DDSLSNSEEEPDRQQPQSGKRGGRKRRSSRRSAGGGAGPGGAAGGGVGGGDEPGSPAQGK 73

Query: 359 R 361
           R
Sbjct: 74  R 74

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>IF2_LEIXX (Q6AG49) Translation initiation factor IF-2|
          Length = 916

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 28/77 (36%), Positives = 30/77 (38%), Gaps = 5/77 (6%)
 Frame = +2

Query: 110 SSRKFPNPRQRRPKSSLLGLARRGDDDVHGGPRRVGHQL--DQAGHGYSPRPRRGEVSTG 283
           S    P P   RP S  +G  R G     GG  R G Q     AG G     +R     G
Sbjct: 193 SPSNIPRPAPPRPGSPRIGAPRPGGGQRQGGGGRPGFQQRPGSAGGGAGGGLQR----PG 248

Query: 284 GAAA---SGTDLGGRGG 325
           GA A   SG   GG GG
Sbjct: 249 GAGAGGFSGPRTGGGGG 265

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>WASL_HUMAN (O00401) Neural Wiskott-Aldrich syndrome protein (N-WASP)|
          Length = 505

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 13/21 (61%), Positives = 13/21 (61%)
 Frame = -3

Query: 342 ARGSWAPPRPPRSVPEAAAPP 280
           ARG  APP PP   P AA PP
Sbjct: 304 ARGRGAPPPPPSRAPTAAPPP 324

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>VNUA_PRVKA (P33485) Probable nuclear antigen|
          Length = 1733

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 23/67 (34%), Positives = 29/67 (43%)
 Frame = +2

Query: 164  GLARRGDDDVHGGPRRVGHQLDQAGHGYSPRPRRGEVSTGGAAASGTDLGGRGGAQEPRA 343
            GL  RG+    G    VGH+ +    G +  P RG     G    G   GG GG + PR 
Sbjct: 1352 GLPERGEQRPVGRRGPVGHEREVVVGG-AALPARGPGGLRGRGRGGRGGGGGGGGRGPRG 1410

Query: 344  VQQGVRR 364
              +G RR
Sbjct: 1411 --RGGRR 1415

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>PKHA4_HUMAN (Q9H4M7) Pleckstrin homology domain-containing family A member 4|
           (Phosphoinositol 3-phosphate-binding protein 1) (PEPP-1)
          Length = 779

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
 Frame = +2

Query: 248 SPRPRRGEVSTGGAAASGTDLGGRGGAQEP--RAVQQGVRRPLLPQESAA 391
           +P PR   V+  G+        GRGG   P   A   G+  P+LPQ+  A
Sbjct: 718 TPPPRSPPVANSGSTGFSRRGSGRGGGPTPWGPAWDAGIAPPVLPQDEGA 767

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>CD5R2_MOUSE (O35926) Cyclin-dependent kinase 5 activator 2 precursor (CDK5|
           activator 2) (Cyclin-dependent kinase 5 regulatory
           subunit 2) (P39) (P39I)
          Length = 369

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -3

Query: 336 GSWAPPRPPRSVPEAAAPPVETSPRR 259
           G   PP PP   P+AA P   +SPRR
Sbjct: 151 GGGKPPPPPPPAPQAAPPAPGSSPRR 176

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>KCNKF_HUMAN (Q9H427) Potassium channel subfamily K member 15 (Acid-sensitive|
           potassium channel protein TASK-5) (TWIK-related
           acid-sensitive K(+) channel 5) (Two pore potassium
           channel KT3.3)
          Length = 330

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 6/45 (13%)
 Frame = -3

Query: 405 RFAPAAADSWGRRGRRTP------CCTARGSWAPPRPPRSVPEAA 289
           RF  A+AD W  R  R P         +RG W P RP RSV  A+
Sbjct: 245 RFLVASAD-WPERAARPPSPRPPGAPESRGLWLPRRPARSVGSAS 288

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>RP3A_BOVIN (Q06846) Rabphilin-3A (Exophilin-1)|
          Length = 704

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 28/98 (28%), Positives = 38/98 (38%), Gaps = 5/98 (5%)
 Frame = +2

Query: 125 PNPRQRRPKSSLLGLARRGDDDVHGGPRRVGHQLDQA-GHG-YSPRPRR---GEVSTGGA 289
           P P    PK       R   +D  G  ++ G  +  A G G Y P  RR     +S+ G 
Sbjct: 190 PEPATPEPKHPARAPTRGDTEDRRGPGQKTGPDMTSAPGRGSYGPPVRRASEARMSSSGR 249

Query: 290 AASGTDLGGRGGAQEPRAVQQGVRRPLLPQESAAAGAN 403
            +   D G    A +P     G+RR    Q S  A A+
Sbjct: 250 DSDSWDQGHGMAAGDPSQSPAGLRRANSVQASRPAPAS 287

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>ADAM8_HUMAN (P78325) ADAM 8 precursor (EC 3.4.24.-) (A disintegrin and|
           metalloproteinase domain 8) (Cell surface antigen MS2)
           (CD156a antigen) (CD156)
          Length = 824

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 23/76 (30%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
 Frame = +2

Query: 116 RKFPNPRQRRPKSSLLGLARRGDDDVHGGPRRVGHQLDQAGHGYSPRPRRGEVSTG-GAA 292
           R+ P PR RR   S LGL           P RV + L   GH ++   R+     G G  
Sbjct: 35  RRLPGPRVRRALPSHLGL----------HPERVSYVLGATGHNFTLHLRKNRDLLGSGYT 84

Query: 293 ASGTDLGGRGGAQEPR 340
            + T   G    ++PR
Sbjct: 85  ETYTAANGSEVTEQPR 100

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>MYSC_ACACA (P10569) Myosin IC heavy chain|
          Length = 1168

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 28/78 (35%), Positives = 32/78 (41%), Gaps = 11/78 (14%)
 Frame = +2

Query: 197  GGPRRVGHQLDQAGHGYSPRPRRGEVSTGGAA----------ASGTDLGGRGGAQEPRAV 346
            GGP R G     AG    P   RG  + GGAA          A G   GGRGGA  P  +
Sbjct: 1077 GGPGRGGAPPPGAGRA-GPPGGRGMPAPGGAAPRGRGAPPPGAGGPPGGGRGGAPPPGGM 1135

Query: 347  Q-QGVRRPLLPQESAAAG 397
            + +G   P  P   A  G
Sbjct: 1136 RGRGGPGPAPPGGMARGG 1153

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>ZCHC3_HUMAN (Q9NUD5) Zinc finger CCHC domain-containing protein 3|
          Length = 404

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 17/66 (25%), Positives = 25/66 (37%)
 Frame = +2

Query: 197 GGPRRVGHQLDQAGHGYSPRPRRGEVSTGGAAASGTDLGGRGGAQEPRAVQQGVRRPLLP 376
           G P+  G + D AG    PR ++G    G    +            P   +    RPL  
Sbjct: 95  GDPK--GRRRDPAGEAVDPRKKKGAAEAGRRKKAEAAAAAMATPARPGEAEDAAERPLQD 152

Query: 377 QESAAA 394
           + +AAA
Sbjct: 153 EPAAAA 158

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>HXA11_HUMAN (P31270) Homeobox protein Hox-A11 (Hox-1I)|
          Length = 313

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +2

Query: 275 STGGAAASGTDLGGRGGAQEPRAVQQGVRRPLLPQESAA 391
           +TG  A S +D GG GG +E  A  +   R   P+ S++
Sbjct: 183 ATGAPATSSSDSGGGGGCRETAAAAEEKERRRRPESSSS 221

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>DPOA2_HUMAN (Q14181) DNA polymerase alpha subunit B (DNA polymerase alpha 70|
           kDa subunit)
          Length = 598

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 14/28 (50%), Positives = 15/28 (53%)
 Frame = +2

Query: 245 YSPRPRRGEVSTGGAAASGTDLGGRGGA 328
           Y+ R  RGEV T    A G    GRGGA
Sbjct: 161 YNSRSNRGEVVTSFGLAQGVSWSGRGGA 188

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>RL15_CHLTR (P28534) 50S ribosomal protein L15|
          Length = 144

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 20/51 (39%), Positives = 26/51 (50%)
 Frame = +2

Query: 104 KISSRKFPNPRQRRPKSSLLGLARRGDDDVHGGPRRVGHQLDQAGHGYSPR 256
           K+   + P+PR+RR K  LLG   RG    HG     GH+ D +  GY  R
Sbjct: 3   KLECLQDPSPRKRRTK--LLG---RGPSSGHGKTSGRGHKGDGSRSGYKRR 48

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>AGO1_ARATH (O04379) Argonaute protein|
          Length = 1048

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 20/58 (34%), Positives = 27/58 (46%)
 Frame = +2

Query: 179 GDDDVHGGPRRVGHQLDQAGHGYSPRPRRGEVSTGGAAASGTDLGGRGGAQEPRAVQQ 352
           G     GG ++ G Q  Q G GY+P+P++G              GGRG  Q P+  QQ
Sbjct: 29  GRGSQRGGFQQGGGQ-HQGGRGYTPQPQQG------------GRGGRGYGQPPQQQQQ 73

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>WASP_MOUSE (P70315) Wiskott-Aldrich syndrome protein homolog (WASp)|
          Length = 520

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 18/47 (38%), Positives = 19/47 (40%)
 Frame = -3

Query: 375 GRRGRRTPCCTARGSWAPPRPPRSVPEAAAPPVETSPRRGRGEYPCP 235
           GR G   P   A G   PP PP  +P A  PP    P       PCP
Sbjct: 380 GRGGPPPPPPPATGRSGPPPPP--LPGAGGPPAPPPPPPPPPPPPCP 424

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>RIN3_MOUSE (P59729) Ras and Rab interactor 3 (Ras interaction/interference|
           protein 3)
          Length = 980

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -3

Query: 324 PPRPPRSVPEAAAPPVETSPRRGRGEYPCP 235
           PPRP  + P+A +P  + SPRR     P P
Sbjct: 254 PPRPTPATPDATSPTSKGSPRRPPPPPPLP 283

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>CLPB_MOUSE (Q60649) Caseinolytic peptidase B protein homolog (Suppressor of|
           potassium transport defect 3)
          Length = 677

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
 Frame = -3

Query: 402 FAPA-AADSWGRRGRRT--PCCTARGSWAPPRPPRSVP 298
           F P   A +WGRRG RT  P  TA  S   P P  ++P
Sbjct: 62  FVPGRGAATWGRRGERTEIPYLTAASSERGPSPEETLP 99

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>BRD4_HUMAN (O60885) Bromodomain-containing protein 4 (HUNK1 protein)|
          Length = 1362

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = -3

Query: 324 PPRPPRSVPEAAAPPVETSP 265
           PP PP S+P+ AAP +++SP
Sbjct: 778 PPPPPPSMPQQAAPAMKSSP 797

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>WIF1_DROME (Q9W3W5) Protein shifted precursor (WIF-1-like protein)|
          Length = 456

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
 Frame = +2

Query: 236 GHGYSPR---PRRGEVSTGGAAASGTDLGGRGGAQEPRAVQQGV 358
           GHG+ PR    ++ +   GG +  G   GG GG++  R  + G+
Sbjct: 74  GHGHQPRRGQRKKQQGGGGGGSGGGGGNGGGGGSRHNRNEESGI 117

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>KCAB3_HUMAN (O43448) Voltage-gated potassium channel beta-3 subunit (K(+)|
           channel beta-3 subunit) (Kv-beta-3)
          Length = 404

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 28/83 (33%), Positives = 35/83 (42%), Gaps = 5/83 (6%)
 Frame = +2

Query: 128 NPRQRRPKSSLLGLARRGDDDVHGGPRRVGHQLDQAGHGYSPRPRR----GEVSTGGAAA 295
           N R R  +  L G  R G    +GGP   GH     G G  P+ R     G  + GGA  
Sbjct: 11  NLRSRSSEDRLCG-PRPGPGGGNGGPAGGGHGNPPGGGGSGPKARAAVVPGPPAPGGAVR 69

Query: 296 SGTDLGGRGGAQEPRAVQQ-GVR 361
             T   GRG   + R + + GVR
Sbjct: 70  EST---GRGTGMKYRNLGKCGVR 89

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>HXA3_HUMAN (O43365) Homeobox protein Hox-A3 (Hox-1E)|
          Length = 443

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -3

Query: 321 PRPPRSVPEAAAPPVETSPRRGRGEYPCPA 232
           P+PP   P A  PP   SP +     P PA
Sbjct: 109 PQPPAPTPAAPPPPSSASPPQNASNNPTPA 138

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>ZN580_HUMAN (Q9UK33) Zinc finger protein 580 (LDL-induced EC protein)|
          Length = 172

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -3

Query: 312 PRSVPEAAAPPVETSPRRGRGEYPCP 235
           PR  P+  APP E  PR+G   Y CP
Sbjct: 73  PRGPPQREAPPGEPGPRKG---YSCP 95

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>TWST1_GORGO (Q8MI06) Twist-related protein 1|
          Length = 203

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 19/61 (31%), Positives = 23/61 (37%), Gaps = 1/61 (1%)
 Frame = +2

Query: 182 DDDVHGGPRRVGHQLDQAGHGYSPRPRRGEVSTGGAAA-SGTDLGGRGGAQEPRAVQQGV 358
           DD +         Q   +G     + R    S GG A   G   GG GG  EP +  QG 
Sbjct: 14  DDSLSNSEEEPDRQQPPSGKRGGRKRRSSRRSAGGGAGPGGAASGGAGGGDEPGSPAQGK 73

Query: 359 R 361
           R
Sbjct: 74  R 74

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>MCL1_CANFA (Q8HYS5) Induced myeloid leukemia cell differentiation protein|
           Mcl-1 homolog
          Length = 350

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 14/41 (34%), Positives = 17/41 (41%)
 Frame = +2

Query: 281 GGAAASGTDLGGRGGAQEPRAVQQGVRRPLLPQESAAAGAN 403
           GG   +G  +GG  GA  P  +    RR   P    A G N
Sbjct: 48  GGGGEAGAVIGGSAGASPPTTLAPDARRVARPSPIGAEGPN 88

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>RL15_CHLMU (Q9PJN0) 50S ribosomal protein L15|
          Length = 144

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 20/51 (39%), Positives = 26/51 (50%)
 Frame = +2

Query: 104 KISSRKFPNPRQRRPKSSLLGLARRGDDDVHGGPRRVGHQLDQAGHGYSPR 256
           K+   + P+PR+RR K  LLG   RG    HG     GH+ D +  GY  R
Sbjct: 3   KLEYLQDPSPRKRRTK--LLG---RGPSSGHGKTSGRGHKGDGSRSGYKRR 48

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>CD99_MOUSE (Q8VCN6) CD99 antigen precursor (Paired immunoglobin-like type 2|
           receptor-ligand) (PILR-L)
          Length = 175

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 27/85 (31%), Positives = 34/85 (40%)
 Frame = +2

Query: 104 KISSRKFPNPRQRRPKSSLLGLARRGDDDVHGGPRRVGHQLDQAGHGYSPRPRRGEVSTG 283
           K  +R  P+P+  RP     G++   D D+           D AG G     RRG    G
Sbjct: 75  KPGNRPQPDPKPPRPHGDSGGIS---DSDL----------ADAAGQGGGGAGRRGSGDEG 121

Query: 284 GAAASGTDLGGRGGAQEPRAVQQGV 358
           G        GG GGA EP    QG+
Sbjct: 122 GH-------GGAGGA-EPEGTPQGL 138

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>ZN513_HUMAN (Q8N8E2) Zinc finger protein 513|
          Length = 479

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = -3

Query: 378 WGRRGRRTPCCTARGSWAPPRPPRSVPEAAAPP 280
           +G  G   P  +A   WAPP  P SV  +  PP
Sbjct: 432 YGHGGAGGPGLSASEGWAPPHSPPSVLSSRGPP 464

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>PKND_CHLMU (Q9PK92) Serine/threonine-protein kinase pknD (EC 2.7.11.1)|
          Length = 934

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = -2

Query: 199 SVNIIVAATREPQERGFGSTLPRIGEFATGNFGCGLGIW 83
           SV +  + T+   + G G   P   E   G F CG G+W
Sbjct: 351 SVRVECSVTKSSVQEGVGIFFPPSKEADKGEFYCGYGLW 389

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>BRC4_DROME (Q24206) Broad-complex core-protein isoform 6|
          Length = 880

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
 Frame = +2

Query: 218 HQLDQAG----HGYSPRPRRGEVSTGGAAASGTDLGGRGG 325
           H L +AG    H +    RR  +S  GA +S +  GGRGG
Sbjct: 634 HALARAGSPMEHHHLLHHRRASLSPSGAVSSASGAGGRGG 673

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>GATD_METMA (Q8PUM7) Glutamyl-tRNA(Gln) amidotransferase subunit D (EC 6.3.5.-)|
           (Glu-ADT subunit D)
          Length = 425

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +2

Query: 248 SPRPRRGEVSTGGAAASGTDLGGRGGAQEPRAVQQGVRRPLLPQES 385
           +P    GE + GG        GG+ G +EP   ++ V +P LP+ S
Sbjct: 50  TPLENNGEAANGGN-------GGKNGQKEPEPAKEKVSKPGLPKVS 88

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>GAR1_CANGA (Q6FSB0) H/ACA ribonucleoprotein complex subunit 1 (snoRNP protein|
           GAR1)
          Length = 222

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +2

Query: 281 GGAAASGTDLGGRGGAQEPRAVQQG 355
           GG   S    GGRGGA+  R +QQG
Sbjct: 9   GGRGGSRGGFGGRGGARGGRPIQQG 33

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>HXD3_CHICK (O93353) Homeobox protein Hox-D3|
          Length = 413

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = -3

Query: 327 APPRPPRSVPEAAAPPVETSPRRGRGEYPCPA 232
           APP+PP +      PP   SP +     P PA
Sbjct: 89  APPQPPPAPQAQPPPPSSASPSQNASSNPAPA 120

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>HXA3_CHICK (Q7T3J5) Homeobox protein Hox-A3|
          Length = 413

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = -3

Query: 327 APPRPPRSVPEAAAPPVETSPRRGRGEYPCPA 232
           APP+PP +      PP   SP +     P PA
Sbjct: 89  APPQPPPAPQAQPPPPSSASPSQNASSNPAPA 120

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>FHOD1_MOUSE (Q6P9Q4) FH1/FH2 domain-containing protein (Formin homolog|
           overexpressed in spleen) (FHOS) (Formin homology 2
           domain-containing protein 1)
          Length = 1196

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 8/64 (12%)
 Frame = -3

Query: 399 APAAADSWGRRGRRTPCC--------TARGSWAPPRPPRSVPEAAAPPVETSPRRGRGEY 244
           A AAA + GRR RR P          +  G   P R P      +A PV ++P  G    
Sbjct: 343 AAAAAAAGGRRERRKPSSEEGKRSRRSLEGGGCPVRAPEPGSTGSASPVGSTPSTGSAPP 402

Query: 243 PCPA 232
             PA
Sbjct: 403 TNPA 406

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>DHN1_PEA (P28639) Dehydrin DHN1|
          Length = 197

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = +2

Query: 242 GYSPRPRRGEVSTGGAAASGTDLGGRGGAQEPRAVQQGVRRPLL 373
           GY   P  G  +TG    +GT  GG G  +  R    G ++ ++
Sbjct: 81  GYGTNPEYGNTNTGSGYGTGTGYGGSGTNEYVREDHHGDKKGVM 124

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>V70K_TYMVA (P20131) 69 kDa protein|
          Length = 628

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 14/28 (50%), Positives = 15/28 (53%)
 Frame = -3

Query: 324 PPRPPRSVPEAAAPPVETSPRRGRGEYP 241
           PP PPR +P  A PP   SP R  G  P
Sbjct: 435 PPPPPRRLPSPATPP--QSPLRDLGRTP 460

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>SOX8_MOUSE (Q04886) Transcription factor SOX-8|
          Length = 464

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = +2

Query: 209 RVGHQLDQAGHGYSPRPRRGEVSTGGAAA-SGTDLGGRGG 325
           RV H+ D   + Y PR RR  V TG + + SGT+LG   G
Sbjct: 156 RVQHKKDHPDYKYQPR-RRKSVKTGRSDSDSGTELGHHPG 194

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>RL3_PSEAE (Q9HWD5) 50S ribosomal protein L3|
          Length = 211

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = -2

Query: 163 QERGFGSTLPRIGEFATGNFGCGLGIWE-GCGEERRASG 50
           + R    T  + G FA  N   G G+WE   GEE+ A+G
Sbjct: 55  ERRASRVTKAQAGHFAKANVAAGRGVWEFRLGEEQYAAG 93

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>TWST1_MOUSE (P26687) Twist-related protein 1 (M-twist)|
          Length = 206

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
 Frame = +2

Query: 182 DDDVHGGPRRVGHQLDQAGHGYSPRPRRGEVSTGGAAASGTDLGGR-GGAQEPRAVQQGV 358
           DD +         Q   +G   + + R    S GG+A  G   GG  GG  EP +  QG 
Sbjct: 14  DDSLSNSEEEPDRQQPASGKRGARKRRSSRRSAGGSAGPGGATGGGIGGGDEPGSPAQGK 73

Query: 359 R 361
           R
Sbjct: 74  R 74

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>PNRC2_MOUSE (Q9CR73) Proline-rich nuclear receptor coactivator 2|
          Length = 140

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 11/43 (25%), Positives = 21/43 (48%)
 Frame = +2

Query: 125 PNPRQRRPKSSLLGLARRGDDDVHGGPRRVGHQLDQAGHGYSP 253
           P+P+ R    +     R+   D +    ++ H+  + GHGY+P
Sbjct: 10  PDPQSRNASKNQEQQNRQKSKDQNSSQTKIAHKKKERGHGYNP 52

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>KRA61_RABIT (Q02957) Keratin, glycine/tyrosine-rich of hair|
          Length = 79

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -2

Query: 121 FATGNFGCGLGIWEGCGEERRASG 50
           +  G  GCGLG + GCG  R   G
Sbjct: 23  YGYGGLGCGLGSYYGCGYRRLGCG 46

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>IER5_MOUSE (O89113) Immediate early response gene 5 protein|
          Length = 308

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 17/53 (32%), Positives = 21/53 (39%)
 Frame = -3

Query: 393 AAADSWGRRGRRTPCCTARGSWAPPRPPRSVPEAAAPPVETSPRRGRGEYPCP 235
           +AA +WGR  R     +  GS A P  PR+V      P     R      P P
Sbjct: 140 SAAAAWGRVERPRAASSGGGSDACPEGPRAVRRPCGCPPAVEERSSEDGSPAP 192

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>TRPF_ASHGO (Q757J9) N-(5'-phosphoribosyl)anthranilate isomerase (EC 5.3.1.24)|
           (PRAI)
          Length = 210

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = -1

Query: 392 RRQTLGGEEADARPVVQRGAPGRR 321
           RR+T+G EEA A     RGAPG R
Sbjct: 34  RRRTVGREEARAIAAAVRGAPGTR 57

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>SF3B4_HUMAN (Q15427) Splicing factor 3B subunit 4 (Spliceosome-associated|
           protein 49) (SAP 49) (SF3b50) (Pre-mRNA-splicing factor
           SF3b 49 kDa subunit)
          Length = 424

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -3

Query: 336 GSWAPPRPPRSVPEAAAPPVETSPR 262
           G   PPRPP  +P    PP+   PR
Sbjct: 330 GGQPPPRPPPGMPHPGPPPMGMPPR 354

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>CI004_HUMAN (Q9P0K9) Protein C9orf4 (Brain protein CG-6)|
          Length = 344

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +2

Query: 254 RPRRGEVSTGGAAASGTDLGGRGGAQEP 337
           RPR+G    GG+AA+    GG GG   P
Sbjct: 3   RPRQGGGGAGGSAAARARAGGLGGGSVP 30

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>IF2_MYCLE (Q9Z5I9) Translation initiation factor IF-2|
          Length = 924

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 21/72 (29%), Positives = 26/72 (36%)
 Frame = +2

Query: 113 SRKFPNPRQRRPKSSLLGLARRGDDDVHGGPRRVGHQLDQAGHGYSPRPRRGEVSTGGAA 292
           +R  P P   RP +S   ++ R    V GG                PRP R  V   G  
Sbjct: 189 ARPIPRPPAPRPSASPSSMSPRPGGAVGGG---------------GPRPPRTGVPRPGGG 233

Query: 293 ASGTDLGGRGGA 328
             G  +GGR  A
Sbjct: 234 RPGAPVGGRSDA 245

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>RHLE_ECOLI (P25888) Putative ATP-dependent RNA helicase rhlE (EC 3.6.1.-)|
          Length = 454

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
 Frame = +2

Query: 194 HGGPRRVGHQLDQAGHGYSPRPRRGEVSTGGAAASGTDLGGRG-GAQEPRAVQQGVRRPL 370
           +G  +R G    Q G     +PRRGE     A+A   +   R  G  +P   QQ  RRP 
Sbjct: 389 NGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSASAKPAEKPSRRLGDAKPAGEQQRRRRPR 448

Query: 371 LP 376
            P
Sbjct: 449 KP 450

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>KTNA1_STRPU (O61577) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)|
           (Katanin p60 subunit) (p60 katanin)
          Length = 516

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
 Frame = +2

Query: 125 PNPRQRRPKSSLLGLARRGDDDVHGGPRRVGHQL---DQAGHGYSPRPRRGEVSTGGAAA 295
           P P   RP       AR+ D      P +  ++    D+ G G  P  RRG+  +GG   
Sbjct: 118 PTPVDHRPSPPYQRAARK-DPPRRSEPSKPANRAPGNDRGGRG--PSDRRGDARSGG--- 171

Query: 296 SGTDLGGRGGAQ 331
                GGRGGA+
Sbjct: 172 -----GGRGGAR 178

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>HORN_HUMAN (Q86YZ3) Hornerin|
          Length = 2850

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 14/45 (31%), Positives = 20/45 (44%)
 Frame = +2

Query: 197 GGPRRVGHQLDQAGHGYSPRPRRGEVSTGGAAASGTDLGGRGGAQ 331
           G  + +GH    +G G SP P RG   +G   +S     G G  +
Sbjct: 523 GSRQSLGHSRHGSGSGQSPSPSRGRHESGSRQSSSYGPHGYGSGR 567

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>DHN3_PEA (P28641) Dehydrin DHN3|
          Length = 232

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +2

Query: 242 GYSPRPRRGEVSTGGAAASGTDLGGRG 322
           GY  +P  G  +TG    +GT  GG G
Sbjct: 82  GYGTKPEYGSTNTGSGYGTGTGYGGSG 108

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>HXA11_MOUSE (P31311) Homeobox protein Hox-A11 (Hox-1.9)|
          Length = 313

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +2

Query: 275 STGGAAASGTDLGGRGGAQEPRAVQQGVRR 364
           +TG  A S +D GG GG QE  A ++  RR
Sbjct: 185 ATGAPATSSSDGGGGGGCQEAAAEEKERRR 214

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>SPEG_HUMAN (Q15772) Striated muscle preferentially expressed protein kinase (EC|
            2.7.11.1) (Aortic preferentially expressed protein 1)
            (APEG-1)
          Length = 3223

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
 Frame = -3

Query: 357  TPCCTARGSWAPPRPPR---SVPEAAAPPVETSPRRGRG 250
            TP        +PP PP    S  +A  PP +T PRR RG
Sbjct: 2813 TPPSVTVSPSSPPTPPSQALSSLKAVGPPPQTPPRRHRG 2851

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>FOG1_HUMAN (Q8IX07) Zinc finger protein ZFPM1 (Zinc finger protein multitype|
           1) (Friend of GATA protein 1) (Friend of GATA-1) (FOG-1)
          Length = 1004

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 27/82 (32%), Positives = 31/82 (37%), Gaps = 6/82 (7%)
 Frame = +2

Query: 110 SSRKFPN--PRQRRPKSSLLGLARRGDDDVHGGPRRV--GHQLDQAGHGYSPRPRRGEVS 277
           S R+ P   P  RRPK+               GP R   G   +      SP P   E  
Sbjct: 599 SGRRAPEDAPAARRPKAP-------------PGPARAPPGQPAEPDAPRSSPGPGAREEG 645

Query: 278 TGGAAASGTDLGGRG--GAQEP 337
            GGAA      GGRG  G+Q P
Sbjct: 646 AGGAATPEDGAGGRGSEGSQSP 667

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>WSP1_SCHPO (O36027) Wiskott-Aldrich syndrome homolog protein 1|
          Length = 574

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
 Frame = -3

Query: 396 PAAADSWGRRGRRTPCCTARGSWAPPRPPRSVPEAAA---PPVETSPRRGRGEYPCP 235
           P +A S GR+    P  ++R    PP PP ++P  +A   PP+  + R      P P
Sbjct: 366 PRSAPSTGRQP--PPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTP 420

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>PG54_MYCTU (O53553) Hypothetical PE-PGRS family protein PE_PGRS54 precursor|
          Length = 1901

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 17/55 (30%), Positives = 24/55 (43%)
 Frame = +2

Query: 164  GLARRGDDDVHGGPRRVGHQLDQAGHGYSPRPRRGEVSTGGAAASGTDLGGRGGA 328
            G    GD++ +GG    G Q  Q G G +       ++  G A      GG+GGA
Sbjct: 1106 GAGGAGDNNFNGGQGGAGGQGGQGGLGGASTT---SINANGGAGGNGGTGGKGGA 1157



 Score = 28.5 bits (62), Expect = 8.7
 Identities = 17/55 (30%), Positives = 24/55 (43%)
 Frame = +2

Query: 164  GLARRGDDDVHGGPRRVGHQLDQAGHGYSPRPRRGEVSTGGAAASGTDLGGRGGA 328
            G    GD++ +GG    G Q  Q G G +       ++  G A      GG+GGA
Sbjct: 905  GAGGAGDNNFNGGQGGAGGQGGQGGLGGASTT---SINANGGAGGNGGTGGKGGA 956

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>SSB_SALTY (P0A2F6) Single-stranded DNA-binding protein (SSB)|
           (Helix-destabilizing protein)
          Length = 175

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
 Frame = +2

Query: 281 GGAAASGTDLGGRGGAQEPRAVQQGVR----RPLLPQESAAAGAN 403
           GGA A G   GG G  Q+P+  Q G +        PQ+SA A +N
Sbjct: 119 GGAPAGGQQQGGWGQPQQPQQPQGGNQFSGGAQSRPQQSAPAPSN 163

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>SSB_SALTI (P0A2F7) Single-stranded DNA-binding protein (SSB)|
           (Helix-destabilizing protein)
          Length = 175

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
 Frame = +2

Query: 281 GGAAASGTDLGGRGGAQEPRAVQQGVR----RPLLPQESAAAGAN 403
           GGA A G   GG G  Q+P+  Q G +        PQ+SA A +N
Sbjct: 119 GGAPAGGQQQGGWGQPQQPQQPQGGNQFSGGAQSRPQQSAPAPSN 163

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>TNFL6_FELCA (Q861W5) Tumor necrosis factor ligand superfamily member 6 (Fas|
           antigen ligand) (Fas ligand) (CD178 antigen) [Contains:
           Tumor necrosis factor ligand superfamily member 6,
           membrane form; Tumor necrosis factor ligand superfamily
           member 6, solub
          Length = 280

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = -3

Query: 396 PAAADSWGRRGRRTPCCTARGSWAPPRPPRSVPEAAAPPVET 271
           P  +   GR G+R P      +  PP PP  +P    PP++T
Sbjct: 31  PCPSSVPGRPGQRRPPPPPPPTLPPPPPPPPLPPLPLPPLKT 72


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,697,552
Number of Sequences: 219361
Number of extensions: 1029543
Number of successful extensions: 7116
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 5674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6975
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2968155324
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result