>MURD_XANCP (Q8P775) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC|
           6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
           synthetase) (D-glutamic acid-adding enzyme)
          Length = 468

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 8/48 (16%)
 Frame = -2

Query: 365 HALRGILGAIGAERGV---GDGAPLLAR-----RRGLHFASLAGSGPA 246
           HA++    A+GA+ GV     GAP          RG HFA LAG  PA
Sbjct: 410 HAMQLARSALGAQGGVLLLSPGAPSFGVYSDYVARGRHFAQLAGFDPA 457

>MURD_XANC8 (Q4UWX9) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC|
           6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
           synthetase) (D-glutamic acid-adding enzyme)
          Length = 468

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 8/48 (16%)
 Frame = -2

Query: 365 HALRGILGAIGAERGV---GDGAPLLAR-----RRGLHFASLAGSGPA 246
           HA++    A+GA+ GV     GAP          RG HFA LAG  PA
Sbjct: 410 HAMQLARSALGAQGGVLLLSPGAPSFGVYSDYVARGRHFAQLAGFDPA 457

>PDC1_MAIZE (P28516) Pyruvate decarboxylase isozyme 1 (EC 4.1.1.1) (PDC)|
          Length = 610

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 10/20 (50%), Positives = 16/20 (80%)
 Frame = -2

Query: 437 DRAEVVQPSRLILVDGPALG 378
           ++A +VQP R+++ DGPA G
Sbjct: 349 EKAVIVQPDRMVVGDGPAFG 368


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.315    0.128    0.421 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,920,234
Number of Sequences: 219361
Number of extensions: 744949
Number of successful extensions: 3426
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3254
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3426
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2793557952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)