Clone Name | bastl03e06 |
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Clone Library Name | barley_pub |
>CR1FA_BACTA (Q03746) Pesticidal crystal protein cry1Fa (Insecticidal| delta-endotoxin CryIF(a)) (Crystaline entomocidal protoxin) (134 kDa crystal protein) Length = 1174 Score = 31.2 bits (69), Expect = 1.5 Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%) Frame = +1 Query: 280 DPRPRSRALGDPLLL-GPFGAPHLLVGV 360 DPRP R L DP+ + G FG PH ++G+ Sbjct: 351 DPRPFYRTLSDPVFVRGGFGNPHYVLGL 378
>CR1FB_BACTM (O66377) Pesticidal crystal protein cry1Fb (Insecticidal| delta-endotoxin CryIF(b)) (Crystaline entomocidal protoxin) (132 kDa crystal protein) Length = 1169 Score = 31.2 bits (69), Expect = 1.5 Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%) Frame = +1 Query: 280 DPRPRSRALGDPLLL-GPFGAPHLLVGV 360 DPRP R L DP+ + G FG PH ++G+ Sbjct: 351 DPRPFYRTLSDPVFVRGGFGNPHYVLGL 378
>TXND3_ANTCR (P90666) Thioredoxin domain-containing protein 3 homolog| (Intermediate chain 1) Length = 837 Score = 30.8 bits (68), Expect = 2.0 Identities = 29/102 (28%), Positives = 45/102 (44%), Gaps = 18/102 (17%) Frame = -3 Query: 459 PGGDPENDVGAEVFFEPSTQFSAISVLYIHLK*NSDEQVGGAERSE------EQGVAQSP 298 PGG+ ++ V ++IS+ +K +E GG E++E E+ A+ P Sbjct: 629 PGGEVKDSV------------ASISMEQSQVKGEGEE--GGEEQTEQPAGEGEEQQAEQP 674 Query: 297 AAWTGVQGREGW------------RRAHTPAAQGGRKPVARE 208 AA +G Q EG ++A P A+GG KP E Sbjct: 675 AAESGEQQAEGGEPATETATEGGEQQAEQPPAEGGEKPAEEE 716
>ATS19_MOUSE (P59509) ADAMTS-19 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase with thrombospondin motifs 19) (ADAM-TS 19) (ADAM-TS19) Length = 1210 Score = 30.4 bits (67), Expect = 2.6 Identities = 17/40 (42%), Positives = 19/40 (47%) Frame = +2 Query: 236 CAAGVCARRQPSLPWTPVHAAGLWATPCSSDRSAPPTCSS 355 C AG C RR P+ P H AG W+ S RS SS Sbjct: 623 CKAGECTRRTPA----PEHLAGEWSPWSSCSRSCSSGVSS 658
>SMBP2_HUMAN (P38935) DNA-binding protein SMUBP-2 (EC 3.6.1.-) (ATP-dependent| helicase IGHMBP2) (Immunoglobulin mu-binding protein 2) (SMUBP-2) (Glial factor 1) (GF-1) Length = 993 Score = 30.0 bits (66), Expect = 3.3 Identities = 15/51 (29%), Positives = 25/51 (49%) Frame = -3 Query: 357 SDEQVGGAERSEEQGVAQSPAAWTGVQGREGWRRAHTPAAQGGRKPVAREM 205 S E G+ + + + + TG Q +EG + A PA QG +KP + + Sbjct: 652 SHENSQGSSHAATKPQGPATSTRTGSQRQEGGQEAAAPARQGRKKPAGKSL 702
>YPC2_ECOLI (P18128) Hypothetical 26.4 kDa protein (ORF 245)| Length = 245 Score = 29.3 bits (64), Expect = 5.7 Identities = 14/32 (43%), Positives = 15/32 (46%), Gaps = 5/32 (15%) Frame = +2 Query: 221 GFRPPCAAGVCARRQPSLP-----WTPVHAAG 301 G RPPC A V P+LP W H AG Sbjct: 76 GIRPPCRAPVLCGNPPTLPGAGAVWESAHLAG 107
>SEY1_CRYNE (Q5K8P4) Protein SEY1| Length = 829 Score = 29.3 bits (64), Expect = 5.7 Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 5/75 (6%) Frame = -3 Query: 462 QPGGDPENDVGAEVFFEPSTQFSAISV-----LYIHLK*NSDEQVGGAERSEEQGVAQSP 298 +P D E+D F+PST F+ ++ L K ++D A+RS VAQ P Sbjct: 667 EPSFDVESDPSP---FDPSTAFTLLTATKLLSLESRFKRDADAAYVEAKRSMVSSVAQIP 723 Query: 297 AAWTGVQGREGWRRA 253 GV GW A Sbjct: 724 VWMYGVLVVLGWNEA 738
>PLDP2_ARATH (Q9M9W8) Phospholipase D p2 (EC 3.1.4.4) (AtPLDp2) (Phospholipase| D2 PHOX and PX containing domain) (Phospholipase D zeta 2) (PLDzeta2) Length = 1046 Score = 28.9 bits (63), Expect = 7.5 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = +2 Query: 257 RRQPSLPWTPVHAAGLWATPC 319 R+ P +PW VH A LW PC Sbjct: 542 RKYPRMPWHDVHCA-LWGPPC 561
>CAC1G_RAT (O54898) Voltage-dependent T-type calcium channel alpha-1G subunit| (Voltage-gated calcium channel alpha subunit Cav3.1) Length = 2254 Score = 28.9 bits (63), Expect = 7.5 Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 4/27 (14%) Frame = +2 Query: 197 PRSIS----RATGFRPPCAAGVCARRQ 265 P SIS + G RPPC+ GVC RR+ Sbjct: 2185 PPSISIDPPESQGSRPPCSPGVCLRRR 2211 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,364,886 Number of Sequences: 219361 Number of extensions: 841407 Number of successful extensions: 2576 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 2492 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2573 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3304846491 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)