ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl03e03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1BGAL_ASPOF (P45582) Beta-galactosidase precursor (EC 3.2.1.23) (... 50 2e-06
2BGAL_MALDO (P48981) Beta-galactosidase precursor (EC 3.2.1.23) (... 48 8e-06
3BGAL_LYCES (P48980) Beta-galactosidase precursor (EC 3.2.1.23) (... 48 1e-05
4BGAL_BRAOL (P49676) Beta-galactosidase precursor (EC 3.2.1.23) (... 43 3e-04
5BGAL_DIACA (Q00662) Putative beta-galactosidase precursor (EC 3.... 43 3e-04
6BGAL_ASPNG (P29853) Beta-galactosidase precursor (EC 3.2.1.23) (... 30 2.9
7G7C_MOUSE (Q9JHA8) Protein G7c precursor 28 6.4

>BGAL_ASPOF (P45582) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase)|
          Length = 832

 Score = 50.1 bits (118), Expect = 2e-06
 Identities = 22/26 (84%), Positives = 24/26 (92%)
 Frame = +3

Query: 336 TYDRKAVLINGQRRILFSGSIHYPRS 413
           TYD K+V+INGQRRIL SGSIHYPRS
Sbjct: 28  TYDHKSVIINGQRRILISGSIHYPRS 53



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>BGAL_MALDO (P48981) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid|
           beta-galactosidase) (Exo-(1-->4)-beta-D-galactanase)
          Length = 731

 Score = 48.1 bits (113), Expect = 8e-06
 Identities = 20/26 (76%), Positives = 24/26 (92%)
 Frame = +3

Query: 336 TYDRKAVLINGQRRILFSGSIHYPRS 413
           +YD KA++INGQ+RIL SGSIHYPRS
Sbjct: 27  SYDHKAIIINGQKRILISGSIHYPRS 52



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>BGAL_LYCES (P48980) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid|
           beta-galactosidase) (Exo-(1-->4)-beta-D-galactanase)
          Length = 835

 Score = 47.8 bits (112), Expect = 1e-05
 Identities = 19/26 (73%), Positives = 24/26 (92%)
 Frame = +3

Query: 336 TYDRKAVLINGQRRILFSGSIHYPRS 413
           +YD KA+++NGQR+IL SGSIHYPRS
Sbjct: 25  SYDHKAIIVNGQRKILISGSIHYPRS 50



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>BGAL_BRAOL (P49676) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase)|
          Length = 828

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 18/26 (69%), Positives = 23/26 (88%)
 Frame = +3

Query: 336 TYDRKAVLINGQRRILFSGSIHYPRS 413
           ++D +A+ I+GQRRIL SGSIHYPRS
Sbjct: 28  SHDERAITIDGQRRILLSGSIHYPRS 53



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>BGAL_DIACA (Q00662) Putative beta-galactosidase precursor (EC 3.2.1.23)|
           (Lactase) (SR12 protein)
          Length = 731

 Score = 42.7 bits (99), Expect = 3e-04
 Identities = 19/25 (76%), Positives = 21/25 (84%)
 Frame = +3

Query: 339 YDRKAVLINGQRRILFSGSIHYPRS 413
           YD +A+ IN QRRIL SGSIHYPRS
Sbjct: 33  YDYRAIKINDQRRILLSGSIHYPRS 57



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>BGAL_ASPNG (P29853) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase)|
           (Tilactase) (Lactase-N)
          Length = 1006

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = +3

Query: 336 TYDRKAVLINGQRRILFSGSIH 401
           T+D K++ ING+R ++FSG  H
Sbjct: 47  TWDDKSLFINGERIMIFSGEFH 68



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>G7C_MOUSE (Q9JHA8) Protein G7c precursor|
          Length = 891

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 16/42 (38%), Positives = 18/42 (42%)
 Frame = -2

Query: 199 DSTRGRAHANAPVPCVVFTGLPPSTPLHHGRTSFSFPVFCWW 74
           D   G AH+ APV   V   L PST +  GR         WW
Sbjct: 835 DQLDGPAHSAAPVLPPVSPALLPSTLVTQGRAGGGMAGKAWW 876


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.132    0.417 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,024,101
Number of Sequences: 219361
Number of extensions: 717366
Number of successful extensions: 2926
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2922
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2169600302
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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