ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl03d12 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CR388032.9| Zebrafish DNA sequence from clone DKEY-22L9 in linkage group 23, complete sequence Length = 271754 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 309 acatgaattctttgtgtgaaaa 330 |||||||||||||||||||||| Sbjct: 115785 acatgaattctttgtgtgaaaa 115806
>emb|BX470099.5| Zebrafish DNA sequence from clone DKEY-14P11 in linkage group 23, complete sequence Length = 199831 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 309 acatgaattctttgtgtgaaaa 330 |||||||||||||||||||||| Sbjct: 67199 acatgaattctttgtgtgaaaa 67178
>dbj|AK141079.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230037M15 product:unclassifiable, full insert sequence Length = 4486 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 16 tgaatgtgttgtcctttcttca 37 |||||||||||||||||||||| Sbjct: 3015 tgaatgtgttgtcctttcttca 3036
>gb|AC154619.2| Mus musculus BAC clone RP23-322I21 from 16, complete sequence Length = 191616 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 16 tgaatgtgttgtcctttcttca 37 |||||||||||||||||||||| Sbjct: 65818 tgaatgtgttgtcctttcttca 65797
>ref|XM_591981.2| PREDICTED: Bos taurus hypothetical LOC514175, transcript variant 1 (LOC514175), mRNA Length = 1556 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 318 ctttgtgtgaaaaaataaatgtcag 342 ||||||| ||||||||||||||||| Sbjct: 1496 ctttgtgagaaaaaataaatgtcag 1520
>ref|XM_871549.1| PREDICTED: Bos taurus hypothetical LOC514175, transcript variant 2 (LOC514175), mRNA Length = 1223 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 318 ctttgtgtgaaaaaataaatgtcag 342 ||||||| ||||||||||||||||| Sbjct: 1163 ctttgtgagaaaaaataaatgtcag 1187
>gb|AC108117.2| Homo sapiens chromosome 5 clone RP11-348K15, complete sequence Length = 159501 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 318 ctttgtgtgaaaaaataaatg 338 ||||||||||||||||||||| Sbjct: 156805 ctttgtgtgaaaaaataaatg 156785
>gb|AC122322.4| Mus musculus BAC clone RP23-321G20 from chromosome 6, complete sequence Length = 203073 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 364 tggtcttggtgattctttatt 384 ||||||||||||||||||||| Sbjct: 16578 tggtcttggtgattctttatt 16598
>gb|AC122887.2| Mus musculus BAC clone RP23-91L6 from 10, complete sequence Length = 186103 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 266 gtagcctatgatgaagaaaat 286 ||||||||||||||||||||| Sbjct: 24492 gtagcctatgatgaagaaaat 24472
>gb|BC102480.1| Bos taurus cDNA clone IMAGE:7951715, containing frame-shift errors Length = 1676 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 318 ctttgtgtgaaaaaataaatgtcag 342 ||||||| ||||||||||||||||| Sbjct: 1624 ctttgtgagaaaaaataaatgtcag 1648
>gb|AC008043.5| Drosophila melanogaster, chromosome 3R, region 94A-94A, BAC clone BACR05A08, complete sequence Length = 169581 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 445 cctgtttgaatcaactaattt 465 ||||||||||||||||||||| Sbjct: 149657 cctgtttgaatcaactaattt 149677
>gb|AC074131.3| Homo sapiens chromosome 5 clone CTD-2232E5, complete sequence Length = 126181 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 318 ctttgtgtgaaaaaataaatg 338 ||||||||||||||||||||| Sbjct: 64677 ctttgtgtgaaaaaataaatg 64697
>gb|AE003738.3| Drosophila melanogaster chromosome 3R, section 76 of 118 of the complete sequence Length = 287397 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 445 cctgtttgaatcaactaattt 465 ||||||||||||||||||||| Sbjct: 132471 cctgtttgaatcaactaattt 132491
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 8 gaacccagtgaatgtgttgtccttt 32 |||||| |||||||||||||||||| Sbjct: 9931658 gaaccctgtgaatgtgttgtccttt 9931634
>gb|AC009915.5|AC009915 Drosophila melanogaster, chromosome 3R, region 94A-94A, BAC clone BACR09L14, complete sequence Length = 167368 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 445 cctgtttgaatcaactaattt 465 ||||||||||||||||||||| Sbjct: 42291 cctgtttgaatcaactaattt 42311
>gb|AC111199.4| Homo sapiens BAC clone RP11-722M4 from 2, complete sequence Length = 66095 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 216 agctagatttgggggctgtaaatat 240 ||||||||||||||||||| ||||| Sbjct: 61774 agctagatttgggggctgtgaatat 61798
>dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete genome Length = 3630528 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 271 ctatgatgaagaaaataagaa 291 ||||||||||||||||||||| Sbjct: 1300740 ctatgatgaagaaaataagaa 1300720
>dbj|AP005007.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0521F09 Length = 164823 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 8 gaacccagtgaatgtgttgtccttt 32 |||||| |||||||||||||||||| Sbjct: 112620 gaaccctgtgaatgtgttgtccttt 112596
>dbj|AP004771.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0413A11 Length = 188440 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 8 gaacccagtgaatgtgttgtccttt 32 |||||| |||||||||||||||||| Sbjct: 6351 gaaccctgtgaatgtgttgtccttt 6327
>gb|AC153930.2| Mus musculus 10 BAC RP24-461H14 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 186915 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 266 gtagcctatgatgaagaaaat 286 ||||||||||||||||||||| Sbjct: 71247 gtagcctatgatgaagaaaat 71267
>gb|AC109157.10| Mus musculus chromosome 7, clone RP24-169M16, complete sequence Length = 164968 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 315 attctttgtgtgaaaaaataaatg 338 ||||| |||||||||||||||||| Sbjct: 78508 attctgtgtgtgaaaaaataaatg 78531
>ref|XM_508147.1| PREDICTED: Pan troglodytes antigen identified by monoclonal antibody Ki-67 (LOC450866), mRNA Length = 6534 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 126 gtggagattttcaggatacttctg 149 |||||||||| ||||||||||||| Sbjct: 4084 gtggagatttacaggatacttctg 4061 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 126 gtggagattttcaggatacttctg 149 |||||||||| ||||||||||||| Sbjct: 2635 gtggagatttgcaggatacttctg 2612
>gb|AC146106.3| Pan troglodytes BAC clone RP43-5I17 from 7, complete sequence Length = 221821 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 326 gaaaaaataaatgtcagcagacctgttg 353 |||||||||||||||| || |||||||| Sbjct: 45317 gaaaaaataaatgtcaccaaacctgttg 45344
>gb|AC087843.2| Bos taurus clone RP42-550C12, complete sequence Length = 157165 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 428 ctgagttctaatccttgcctgttt 451 |||| ||||||||||||||||||| Sbjct: 71670 ctgaattctaatccttgcctgttt 71693
>gb|BT013331.1| Lycopersicon esculentum clone 135057F, mRNA sequence Length = 1713 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 agaaaatggagtttgcgagg 71 |||||||||||||||||||| Sbjct: 929 agaaaatggagtttgcgagg 948
>gb|DP000008.1| Bos taurus target 1 genomic scaffold Length = 2072671 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 428 ctgagttctaatccttgcctgttt 451 |||| ||||||||||||||||||| Sbjct: 514515 ctgaattctaatccttgcctgttt 514538
>gb|AC073273.9| Homo sapiens BAC clone RP11-643A21 from 7, complete sequence Length = 152884 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 326 gaaaaaataaatgtcagcagacctgttg 353 |||||||||||||||| || |||||||| Sbjct: 126149 gaaaaaataaatgtcaccaaacctgttg 126176
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 389 aggtcactaattccttctac 408 |||||||||||||||||||| Sbjct: 1467889 aggtcactaattccttctac 1467908
>gb|AC140053.4| Mus musculus BAC clone RP23-258J2 from chromosome 19, complete sequence Length = 186595 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 gtgtgaaaaaataaatgtca 341 |||||||||||||||||||| Sbjct: 7267 gtgtgaaaaaataaatgtca 7248
>ref|NM_002417.2| Homo sapiens antigen identified by monoclonal antibody Ki-67 (MKI67), mRNA Length = 12515 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 126 gtggagattttcaggatacttctg 149 |||||||||| ||||||||||||| Sbjct: 7598 gtggagatttacaggatacttctg 7575 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 126 gtggagattttcaggatacttctg 149 |||||||||| ||||||||||||| Sbjct: 6149 gtggagatttgcaggatacttctg 6126
>ref|XM_648151.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (89.t00014) partial mRNA Length = 999 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 aagatggtgaaaatgaagga 172 |||||||||||||||||||| Sbjct: 548 aagatggtgaaaatgaagga 567
>gb|AC160553.7| Mus musculus chromosome 7, clone RP23-334C12, complete sequence Length = 191999 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 315 attctttgtgtgaaaaaataaatg 338 ||||| |||||||||||||||||| Sbjct: 6306 attctgtgtgtgaaaaaataaatg 6329
>emb|Z85996.1|HS431A14 Human DNA sequence from clone RP3-431A14 on chromosome 6p21 Contains the CDKN1A gene for cyclin-dependent kinase inhibitor 1A, the gene for a novel protein similar to ras family protein, the gene for a novel copine-like protein (KIA1599), a galanin receptor pseudogene, the 3' end of the PPIL1 gene for peptidylprolyl isomerase protein and 2 CpG islands, complete sequence Length = 195364 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 aaagtggagattttcaggat 142 |||||||||||||||||||| Sbjct: 178227 aaagtggagattttcaggat 178246
>emb|AL513549.13| Human DNA sequence from clone RP11-424H23 on chromosome 6 Contains part of a novel gene (FLJ20342), complete sequence Length = 131374 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 catgatactattgcatactt 108 |||||||||||||||||||| Sbjct: 82352 catgatactattgcatactt 82371
>emb|AL390236.21| Human DNA sequence from clone RP11-380J17 on chromosome 10 Contains the 3' end of the PTPRE gene for protein tyrosine phosphatase receptor type E and the 3' end of the MKI67 gene for antigen identified by monoclonal antibody Ki-67, complete sequence Length = 123057 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 126 gtggagattttcaggatacttctg 149 |||||||||| ||||||||||||| Sbjct: 120579 gtggagatttgcaggatacttctg 120602 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 126 gtggagattttcaggatacttctg 149 |||||||||| ||||||||||||| Sbjct: 119130 gtggagatttacaggatacttctg 119153
>emb|AL355795.13| Human DNA sequence from clone RP4-668G5 on chromosome 1p23.1-23.3 Contains the 3' end of a novel gene, complete sequence Length = 146715 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 gtgattctttattgagcagg 391 |||||||||||||||||||| Sbjct: 41182 gtgattctttattgagcagg 41201
>emb|AL353638.15| Human DNA sequence from clone RP11-338L20 on chromosome 9 Contains a ribosomal protein S26 pseudogene 3 and part the 5' UTR of the PTPRD gene for protein tyrosine phosphatase, receptor type, D (HPTP, PTPD, HPTPD), complete sequence Length = 161067 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 220 agatttgggggctgtaaatataat 243 ||||||||||||||||| |||||| Sbjct: 146893 agatttgggggctgtaagtataat 146916
>emb|AL158077.15| Human DNA sequence from clone RP11-471J7 on chromosome 9 Contains the 5' end of the SLC24A2 gene for solute carrier family 24 (sodium/potassium/calcium exchanger), member 2 (NCKX2) and a CpG island, complete sequence Length = 159900 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 ctgagttctaatccttgcct 447 |||||||||||||||||||| Sbjct: 59687 ctgagttctaatccttgcct 59706
>emb|BX548034.14| Zebrafish DNA sequence from clone DKEY-106M16 in linkage group 1, complete sequence Length = 199490 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 432 gttctaatccttgcctgttt 451 |||||||||||||||||||| Sbjct: 9107 gttctaatccttgcctgttt 9088
>emb|AL974309.17| Zebrafish DNA sequence from clone DKEY-29D5 in linkage group 1, complete sequence Length = 214332 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 432 gttctaatccttgcctgttt 451 |||||||||||||||||||| Sbjct: 170007 gttctaatccttgcctgttt 169988
>dbj|AK056236.1| Homo sapiens cDNA FLJ31674 fis, clone NT2RI2005069 Length = 2603 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 aaagtggagattttcaggat 142 |||||||||||||||||||| Sbjct: 935 aaagtggagattttcaggat 916
>gb|AC079327.3| Homo sapiens chromosome 18, clone RP11-240N5, complete sequence Length = 165642 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 358 tgcttctggtcttggtgattcttt 381 ||||| |||||||||||||||||| Sbjct: 129432 tgcttatggtcttggtgattcttt 129409
>gb|AC099792.2| Homo sapiens chromosome 1 clone RP11-436K8, complete sequence Length = 207243 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 gtgattctttattgagcagg 391 |||||||||||||||||||| Sbjct: 188726 gtgattctttattgagcagg 188745
>gb|AC025508.7|AC025508 Homo sapiens, clone RP11-659A24, complete sequence Length = 193598 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 tttgtgtgaaaaaataaatg 338 |||||||||||||||||||| Sbjct: 118418 tttgtgtgaaaaaataaatg 118437
>gb|AC152506.2| Pan troglodytes BAC clone RP43-4B9 from chromosome 7, complete sequence Length = 181146 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 326 gaaaaaataaatgtcagcagacctgttg 353 |||||||||||||||| || |||||||| Sbjct: 8321 gaaaaaataaatgtcaccaaacctgttg 8348
>gb|AC157519.2| Mus musculus BAC clone RP23-202O17 from chromosome 19, complete sequence Length = 215073 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 gtgtgaaaaaataaatgtca 341 |||||||||||||||||||| Sbjct: 71503 gtgtgaaaaaataaatgtca 71484
>emb|BX248312.11| Zebrafish DNA sequence from clone CH211-139O4, complete sequence Length = 164857 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 gtcctttcttcagtaagagt 45 |||||||||||||||||||| Sbjct: 43180 gtcctttcttcagtaagagt 43199
>dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete genome Length = 3031430 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 cctatgatgaagaaaataag 289 |||||||||||||||||||| Sbjct: 1940381 cctatgatgaagaaaataag 1940362
>dbj|BS000039.1| Pan troglodytes chromosome 22 clone:CH251-530H12, map 22, complete sequences Length = 45920 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 ctttaaagcagtttccaaaa 125 |||||||||||||||||||| Sbjct: 3997 ctttaaagcagtttccaaaa 4016
>emb|BX005239.8| Zebrafish DNA sequence from clone CH211-144F7 in linkage group 18, complete sequence Length = 168745 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 320 ttgtgtgaaaaaataaatgt 339 |||||||||||||||||||| Sbjct: 153355 ttgtgtgaaaaaataaatgt 153336
>gb|AC007632.4|AC007632 Homo sapiens clone R529C19B from chromosome 18, complete sequence Length = 205959 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 358 tgcttctggtcttggtgattcttt 381 ||||| |||||||||||||||||| Sbjct: 126591 tgcttatggtcttggtgattcttt 126614
>dbj|AP001671.1| Homo sapiens genomic DNA, chromosome 21q, section 15/105 Length = 340000 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 ctttaaagcagtttccaaaa 125 |||||||||||||||||||| Sbjct: 156932 ctttaaagcagtttccaaaa 156951
>gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome Length = 2178400 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 gaggaagtagcctatgatga 279 |||||||||||||||||||| Sbjct: 654030 gaggaagtagcctatgatga 654011
>dbj|AP002850.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB87D5 Length = 98988 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 tttaaagcagtttccaaaag 126 |||||||||||||||||||| Sbjct: 80872 tttaaagcagtttccaaaag 80891
>emb|AL713871.8| Mouse DNA sequence from clone RP23-40P1 on chromosome X, complete sequence Length = 230701 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 69 aggcaaatcttggttcagaccatg 92 ||||||||||||||| |||||||| Sbjct: 6029 aggcaaatcttggttaagaccatg 6006
>emb|X65551.1|HSMKI67A H.sapiens mki67a mRNA (short type) for antigen of monoclonal antibody Ki-67 Length = 11435 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 126 gtggagattttcaggatacttctg 149 |||||||||| ||||||||||||| Sbjct: 6518 gtggagatttacaggatacttctg 6495 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 126 gtggagattttcaggatacttctg 149 |||||||||| ||||||||||||| Sbjct: 5069 gtggagatttgcaggatacttctg 5046
>emb|X65550.1|HSMKI67 H.sapiens mki67a mRNA (long type) for antigen of monoclonal antibody Ki-67 Length = 12515 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 126 gtggagattttcaggatacttctg 149 |||||||||| ||||||||||||| Sbjct: 7598 gtggagatttacaggatacttctg 7575 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 126 gtggagattttcaggatacttctg 149 |||||||||| ||||||||||||| Sbjct: 6149 gtggagatttgcaggatacttctg 6126
>emb|X74107.1|HSAMAK67 H.sapiens gene for antigen of the monoclonal antibody Ki-67 Length = 29965 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 126 gtggagattttcaggatacttctg 149 |||||||||| ||||||||||||| Sbjct: 21833 gtggagatttacaggatacttctg 21810 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 126 gtggagattttcaggatacttctg 149 |||||||||| ||||||||||||| Sbjct: 20384 gtggagatttgcaggatacttctg 20361
>dbj|AP000745.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2 clone:B546A20, LL56-APP region, complete sequence Length = 55871 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 ctttaaagcagtttccaaaa 125 |||||||||||||||||||| Sbjct: 19644 ctttaaagcagtttccaaaa 19663
>dbj|AP002905.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1672E10 Length = 158401 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 tttaaagcagtttccaaaag 126 |||||||||||||||||||| Sbjct: 93138 tttaaagcagtttccaaaag 93119
>emb|AL731648.6| Mouse DNA sequence from clone RP23-35I10 on chromosome X, complete sequence Length = 119995 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 327 aaaaaataaatgtcagcaga 346 |||||||||||||||||||| Sbjct: 29273 aaaaaataaatgtcagcaga 29254 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,025,760 Number of Sequences: 3902068 Number of extensions: 6025760 Number of successful extensions: 113612 Number of sequences better than 10.0: 61 Number of HSP's better than 10.0 without gapping: 61 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 113354 Number of HSP's gapped (non-prelim): 258 length of query: 482 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 460 effective length of database: 17,147,199,772 effective search space: 7887711895120 effective search space used: 7887711895120 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
