>ref|XM_477949.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3793

 Score =  139 bits (70), Expect = 1e-29
 Identities = 184/222 (82%)
 Strand = Plus / Plus

                                                                       
Query: 225 ccaagggagtggaagatcacggcgcttctgagaaagttatcacggagaacattctaccaa 284
           |||||| ||| || || ||||||||||| || |||||| ||| ||||||||||||  |||
Sbjct: 430 ccaaggaagtagaggagcacggcgcttccgataaagttgtcatggagaacattctgtcaa 489

                                                                       
Query: 285 acggcgatttttctgaagatctacgtttatggcatcctaacggctgccatgtgtttgttg 344
           ||   |||||||| |||| ||||| ||| ||||||||||| || |||||||  ||||| |
Sbjct: 490 acaatgatttttcggaaggtctacatttgtggcatcctaatggttgccatggatttgtgg 549

                                                                       
Query: 345 ccgttgaagggtctggttaccataatggtataaagccacattcagggtctaaatatgccg 404
           | |||||||| || ||||| ||| |||| |||| ||| || |||||||| || |||||||
Sbjct: 550 ctgttgaaggatcaggttatcatcatggaataaggcctcactcagggtcaaattatgccg 609

                                                     
Query: 405 tggttactcatcgcacacagagttggcaagggcttgagcagg 446
           |  |||||| ||||||||| | ||||||||||||||||||||
Sbjct: 610 tacttactcgtcgcacacataattggcaagggcttgagcagg 651

>dbj|AK100891.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023130H08, full
           insert sequence
          Length = 3792

 Score =  139 bits (70), Expect = 1e-29
 Identities = 184/222 (82%)
 Strand = Plus / Plus

                                                                       
Query: 225 ccaagggagtggaagatcacggcgcttctgagaaagttatcacggagaacattctaccaa 284
           |||||| ||| || || ||||||||||| || |||||| ||| ||||||||||||  |||
Sbjct: 429 ccaaggaagtagaggagcacggcgcttccgataaagttgtcatggagaacattctgtcaa 488

                                                                       
Query: 285 acggcgatttttctgaagatctacgtttatggcatcctaacggctgccatgtgtttgttg 344
           ||   |||||||| |||| ||||| ||| ||||||||||| || |||||||  ||||| |
Sbjct: 489 acaatgatttttcggaaggtctacatttgtggcatcctaatggttgccatggatttgtgg 548

                                                                       
Query: 345 ccgttgaagggtctggttaccataatggtataaagccacattcagggtctaaatatgccg 404
           | |||||||| || ||||| ||| |||| |||| ||| || |||||||| || |||||||
Sbjct: 549 ctgttgaaggatcaggttatcatcatggaataaggcctcactcagggtcaaattatgccg 608

                                                     
Query: 405 tggttactcatcgcacacagagttggcaagggcttgagcagg 446
           |  |||||| ||||||||| | ||||||||||||||||||||
Sbjct: 609 tacttactcgtcgcacacataattggcaagggcttgagcagg 650

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  137 bits (69), Expect = 4e-29
 Identities = 171/205 (83%)
 Strand = Plus / Plus

                                                                            
Query: 242      cacggcgcttctgagaaagttatcacggagaacattctaccaaacggcgatttttctgaa 301
                ||||||||||| || |||||| ||| ||||||||||||  |||||   |||||||| |||
Sbjct: 15831775 cacggcgcttccgataaagttgtcatggagaacattctgtcaaacaatgatttttcggaa 15831834

                                                                            
Query: 302      gatctacgtttatggcatcctaacggctgccatgtgtttgttgccgttgaagggtctggt 361
                | ||||| ||| ||||||||||| || |||||||  ||||| || |||||||| || |||
Sbjct: 15831835 ggtctacatttgtggcatcctaatggttgccatggatttgtggctgttgaaggatcaggt 15831894

                                                                            
Query: 362      taccataatggtataaagccacattcagggtctaaatatgccgtggttactcatcgcaca 421
                || ||| |||| |||| ||| || |||||||| || ||||||||  |||||| |||||||
Sbjct: 15831895 tatcatcatggaataaggcctcactcagggtcaaattatgccgtacttactcgtcgcaca 15831954

                                         
Query: 422      cagagttggcaagggcttgagcagg 446
                || | ||||||||||||||||||||
Sbjct: 15831955 cataattggcaagggcttgagcagg 15831979

>dbj|AP005641.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0027N13
          Length = 179669

 Score =  137 bits (69), Expect = 4e-29
 Identities = 171/205 (83%)
 Strand = Plus / Plus

                                                                         
Query: 242   cacggcgcttctgagaaagttatcacggagaacattctaccaaacggcgatttttctgaa 301
             ||||||||||| || |||||| ||| ||||||||||||  |||||   |||||||| |||
Sbjct: 71289 cacggcgcttccgataaagttgtcatggagaacattctgtcaaacaatgatttttcggaa 71348

                                                                         
Query: 302   gatctacgtttatggcatcctaacggctgccatgtgtttgttgccgttgaagggtctggt 361
             | ||||| ||| ||||||||||| || |||||||  ||||| || |||||||| || |||
Sbjct: 71349 ggtctacatttgtggcatcctaatggttgccatggatttgtggctgttgaaggatcaggt 71408

                                                                         
Query: 362   taccataatggtataaagccacattcagggtctaaatatgccgtggttactcatcgcaca 421
             || ||| |||| |||| ||| || |||||||| || ||||||||  |||||| |||||||
Sbjct: 71409 tatcatcatggaataaggcctcactcagggtcaaattatgccgtacttactcgtcgcaca 71468

                                      
Query: 422   cagagttggcaagggcttgagcagg 446
             || | ||||||||||||||||||||
Sbjct: 71469 cataattggcaagggcttgagcagg 71493

>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV,
              complete sequence
          Length = 1466886

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 64     agccgtagcccccgccgccgtcgccg 89
              ||||||||||||||||||||| ||||
Sbjct: 813608 agccgtagcccccgccgccgtggccg 813633

>gb|AY207047.1| Zea mays ZmMybst1 mRNA, complete cds
          Length = 1555

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 62  ggagccgtagcccccgccgccgtcgccgag 91
           |||| |||||||||||||||||||| ||||
Sbjct: 414 ggaggcgtagcccccgccgccgtcggcgag 385

>ref|NM_209509.1| Eremothecium gossypii ADR060Cp (ADR060C), mRNA
          Length = 735

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 64  agccgtagcccccgccgccgtcgccg 89
           ||||||||||||||||||||| ||||
Sbjct: 295 agccgtagcccccgccgccgtggccg 270

>gb|BC068288.1| Mus musculus cDNA clone IMAGE:6433181
          Length = 600

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 206 ccgccgcctcctcctgtgccc 226
           |||||||||||||||||||||
Sbjct: 362 ccgccgcctcctcctgtgccc 382

>gb|AC127554.4| Mus musculus BAC clone RP24-323K23 from chromosome 8, complete
            sequence
          Length = 178416

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 206  ccgccgcctcctcctgtgccc 226
            |||||||||||||||||||||
Sbjct: 8041 ccgccgcctcctcctgtgccc 8021

>gb|L35949.1| Mus musculus domesticus forkhead box f1 (Foxf1) gene, complete cds
          Length = 1479

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 206 ccgccgcctcctcctgtgccc 226
           |||||||||||||||||||||
Sbjct: 81  ccgccgcctcctcctgtgccc 61

>gb|AC124170.3| Mus musculus BAC clone RP23-155H5 from 8, complete sequence
          Length = 235023

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 206    ccgccgcctcctcctgtgccc 226
              |||||||||||||||||||||
Sbjct: 226106 ccgccgcctcctcctgtgccc 226086

>emb|BX640437.1| Bordetella bronchiseptica strain RB50, complete genome; segment 1/16
          Length = 347356

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 63     gagccgtagcccccgccgccg 83
              |||||||||||||||||||||
Sbjct: 326059 gagccgtagcccccgccgccg 326039

>emb|BX640423.1| Bordetella parapertussis strain 12822, complete genome; segment 1/14
          Length = 348251

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 63     gagccgtagcccccgccgccg 83
              |||||||||||||||||||||
Sbjct: 330712 gagccgtagcccccgccgccg 330692

>emb|BX640413.1| Bordetella pertussis strain Tohama I, complete genome; segment 3/12
          Length = 349028

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 63    gagccgtagcccccgccgccg 83
             |||||||||||||||||||||
Sbjct: 75307 gagccgtagcccccgccgccg 75287

>gb|AF346834.1|AF346834 Mus musculus forkhead protein (Foxf1a) gene, complete cds
          Length = 7243

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 206  ccgccgcctcctcctgtgccc 226
            |||||||||||||||||||||
Sbjct: 2907 ccgccgcctcctcctgtgccc 2887

>emb|AL611987.16| Mouse DNA sequence from clone RP23-320B4 on chromosome 15, complete
             sequence
          Length = 81931

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 422   cagagttggcaagggcttgag 442
             |||||||||||||||||||||
Sbjct: 46466 cagagttggcaagggcttgag 46446

>ref|XM_450955.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1074

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 70  agcccccgccgccgtcgccg 89
           ||||||||||||||||||||
Sbjct: 116 agcccccgccgccgtcgccg 135

>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 41      ccgcgccacaccgacgccgtaggagccg 68
               ||||| ||| ||||||||||||||||||
Sbjct: 3193671 ccgcgacacgccgacgccgtaggagccg 3193698

>ref|XM_967526.1| PREDICTED: Tribolium castaneum similar to CG8789-PA, isoform A
            (LOC661365), mRNA
          Length = 2499

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 282  caaacggcgatttttctgaa 301
            ||||||||||||||||||||
Sbjct: 1446 caaacggcgatttttctgaa 1427

>emb|BX572602.1| Rhodopseudomonas palustris CGA009 complete genome; segment 10/16
          Length = 349981

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 41     ccgcgccacaccgacgccgtaggagccg 68
              ||||| ||| ||||||||||||||||||
Sbjct: 173316 ccgcgacacgccgacgccgtaggagccg 173343

>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 41      ccgcgccacaccgacgccgtaggagccg 68
               ||||| ||| ||||||||||||||||||
Sbjct: 2628991 ccgcgacacgccgacgccgtaggagccg 2628964

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 70       agcccccgccgccgtcgccg 89
                ||||||||||||||||||||
Sbjct: 17780069 agcccccgccgccgtcgccg 17780050

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 66      ccgtagcccccgccgccgtcgccg 89
               |||||||||||||||||| |||||
Sbjct: 4386956 ccgtagcccccgccgccgacgccg 4386979

>dbj|AP003508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0470C02
          Length = 158849

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 66    ccgtagcccccgccgccgtcgccg 89
             |||||||||||||||||| |||||
Sbjct: 34637 ccgtagcccccgccgccgacgccg 34660

>dbj|AP005574.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1595_D08
          Length = 116351

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 70    agcccccgccgccgtcgccg 89
             ||||||||||||||||||||
Sbjct: 20713 agcccccgccgccgtcgccg 20694

>dbj|AP005399.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0676H02
          Length = 144252

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 70    agcccccgccgccgtcgccg 89
             ||||||||||||||||||||
Sbjct: 88703 agcccccgccgccgtcgccg 88684

>dbj|AK099819.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013100I11, full
           insert sequence
          Length = 3733

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 66  ccgtagcccccgccgccgtcgccg 89
           |||||||||||||||||| |||||
Sbjct: 246 ccgtagcccccgccgccgacgccg 223

>dbj|AK064102.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-A07, full
           insert sequence
          Length = 1722

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 70  agcccccgccgccgtcgccg 89
           ||||||||||||||||||||
Sbjct: 488 agcccccgccgccgtcgccg 507


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,344,437
Number of Sequences: 3902068
Number of extensions: 3344437
Number of successful extensions: 86806
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 86251
Number of HSP's gapped (non-prelim): 555
length of query: 496
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 474
effective length of database: 17,147,199,772
effective search space: 8127772691928
effective search space used: 8127772691928
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)