Clone Name | bastl03d02 |
---|---|
Clone Library Name | barley_pub |
>IF41_WHEAT (Q03387) Eukaryotic initiation factor iso-4F subunit p82-34| (eIF-(iso)4F p82-34) Length = 788 Score = 140 bits (353), Expect = 1e-33 Identities = 72/90 (80%), Positives = 76/90 (84%) Frame = +2 Query: 155 MTTDQPVISLXXXXXXXXXXXXXLFAPAFAVAASGSGDFLRPHGGGASGVSRIGDLHFET 334 MTTDQPVISL LFAPAFAVAASGSGDFLRPHGGGASGVSRIGDLH E+ Sbjct: 1 MTTDQPVISLRPGGGGGGPRGGRLFAPAFAVAASGSGDFLRPHGGGASGVSRIGDLHSES 60 Query: 335 RERIRYSRDQLLDLRKITDISEQILRLQQE 424 RER+RYSRDQLLDLRKITD++EQILRLQQE Sbjct: 61 RERVRYSRDQLLDLRKITDVTEQILRLQQE 90
>CEA_CITFR (P04480) Colicin-A| Length = 592 Score = 29.3 bits (64), Expect = 3.9 Identities = 15/37 (40%), Positives = 18/37 (48%) Frame = -2 Query: 174 TGWSVVMAEGPEPDQGTAAARSTGNRRGAGEEIAEES 64 TGWS GPEP G + S G+ RG + ES Sbjct: 13 TGWSSERGSGPEPG-GGSHGNSGGHDRGDSSNVGNES 48
>KPCG_BOVIN (P05128) Protein kinase C gamma type (EC 2.7.11.13) (PKC-gamma)| (Fragment) Length = 682 Score = 28.1 bits (61), Expect = 8.8 Identities = 14/39 (35%), Positives = 22/39 (56%) Frame = -3 Query: 146 VPNPTKAPRQLDRQGIGGAPGRKSRRNPSFFFLLLLGEG 30 +P+P+ +P R G +PGR F FL++LG+G Sbjct: 309 IPSPSPSPTDSKRCFFGASPGR--LHISDFSFLMVLGKG 345
>KPCG_RAT (P63319) Protein kinase C gamma type (EC 2.7.11.13) (PKC-gamma)| Length = 697 Score = 28.1 bits (61), Expect = 8.8 Identities = 14/39 (35%), Positives = 22/39 (56%) Frame = -3 Query: 146 VPNPTKAPRQLDRQGIGGAPGRKSRRNPSFFFLLLLGEG 30 +P+P+ +P R G +PGR F FL++LG+G Sbjct: 324 IPSPSPSPTDSKRCFFGASPGR--LHISDFSFLMVLGKG 360
>KPCG_RABIT (P10829) Protein kinase C gamma type (EC 2.7.11.13) (PKC-gamma)| (PKC-delta) Length = 697 Score = 28.1 bits (61), Expect = 8.8 Identities = 14/39 (35%), Positives = 22/39 (56%) Frame = -3 Query: 146 VPNPTKAPRQLDRQGIGGAPGRKSRRNPSFFFLLLLGEG 30 +P+P+ +P R G +PGR F FL++LG+G Sbjct: 324 IPSPSPSPTDSKRCFFGASPGR--LHISDFSFLMVLGKG 360
>KPCG_MOUSE (P63318) Protein kinase C gamma type (EC 2.7.11.13) (PKC-gamma)| Length = 697 Score = 28.1 bits (61), Expect = 8.8 Identities = 14/39 (35%), Positives = 22/39 (56%) Frame = -3 Query: 146 VPNPTKAPRQLDRQGIGGAPGRKSRRNPSFFFLLLLGEG 30 +P+P+ +P R G +PGR F FL++LG+G Sbjct: 324 IPSPSPSPTDSKRCFFGASPGR--LHISDFSFLMVLGKG 360 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,027,361 Number of Sequences: 219361 Number of extensions: 732353 Number of successful extensions: 2719 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 2599 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2719 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2278320915 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)