>SMG_DROME (Q23972) Protein Smaug|
          Length = 999

 Score = 32.0 bits (71), Expect = 0.87
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = +3

Query: 30  PTNQSQYP*TTLSVGPQLPFPNQN*EPPATLQEHHHPTSQQKILQK 167
           P++Q QY   + S    +  P Q   PP + + HHHP   Q++LQ+
Sbjct: 852 PSHQPQYK--SSSYPSFMGNPQQQPPPPPSSKSHHHPQQMQQMLQQ 895

>SYI_CHLCV (Q822L8) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA|
           ligase) (IleRS)
          Length = 1043

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 22/72 (30%), Positives = 27/72 (37%), Gaps = 14/72 (19%)
 Frame = +3

Query: 105 EPPATLQEHHHPTSQQKILQKSFLYEKEGEILVRFTP------------HHFP--CTGTE 242
           EPP +  EH       KIL  SF+ E EG  +V   P            HH P  C    
Sbjct: 290 EPPFSFFEHKRAEGAYKILSGSFVEESEGTGVVHMAPAFGEADFFVCKEHHVPIVCPVDN 349

Query: 243 ETVPAQFIPRFQ 278
                + IP +Q
Sbjct: 350 HGCFTEEIPEYQ 361

>PEPB_STRA5 (Q8E0C9) Group B oligopeptidase pepB (EC 3.4.24.-)|
          Length = 601

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +3

Query: 129 HHHPTSQQKILQKSFLYEKEGEILVRFTPHHFP 227
           HH+ +++Q  L  +F+ E+  E L++   HH P
Sbjct: 247 HHYQSARQSALSANFIPEEVYETLIKTVNHHLP 279

>PEPB_STRA3 (Q53778) Group B oligopeptidase pepB (EC 3.4.24.-)|
          Length = 601

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +3

Query: 129 HHHPTSQQKILQKSFLYEKEGEILVRFTPHHFP 227
           HH+ +++Q  L  +F+ E+  E L++   HH P
Sbjct: 247 HHYQSARQSALSANFIPEEVYETLIKTVNHHLP 279

>MURC_LACJO (P61680) UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8)|
           (UDP-N-acetylmuramoyl-L-alanine synthetase)
          Length = 437

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 18/58 (31%), Positives = 28/58 (48%)
 Frame = +3

Query: 132 HHPTSQQKILQKSFLYEKEGEILVRFTPHHFPCTGTEETVPAQFIPRFQEILADPGKS 305
           HHPT  +  +Q +     + E++V F PH F  T        ++   F+EIL D  K+
Sbjct: 321 HHPTEMRATIQAARQKFPDKELVVVFQPHTFSRT-------KKYQKDFEEILRDVDKA 371

>MTH_DROYA (Q9GT50) G-protein coupled receptor Mth precursor (Protein|
           methuselah)
          Length = 517

 Score = 26.2 bits (56), Expect(2) = 5.6
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 78  VVQRRVWSMDIGIGWLAWICSQLFS 4
           VV+   W+  +G G   WIC+Q +S
Sbjct: 348 VVENEDWNPRMGFGGHCWICTQSWS 372



 Score = 21.6 bits (44), Expect(2) = 5.6
 Identities = 13/38 (34%), Positives = 15/38 (39%)
 Frame = -3

Query: 185 FFVQKRFLEYFLLGGGMVVFLQSCRGFLVLVGEGELWS 72
           F  + RFL Y     GM V L         V E E W+
Sbjct: 318 FLSEHRFLAYNTYAWGMAVVLTGITYLADKVVENEDWN 355

>RNPH_RHIME (Q92SK2) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA|
           nucleotidyltransferase)
          Length = 239

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +3

Query: 162 QKSFLYEKEGEILVRFTPHHFPCTGT-EETVPA 257
           ++SF    EG  LVRF   H  CT + EE VPA
Sbjct: 17  ERSFSKHAEGSCLVRFGDTHVLCTASLEEKVPA 49

>MNTH_MYCBO (O69443) Probable manganese transport protein mntH (BRAMP)|
          Length = 684

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 15/25 (60%), Positives = 19/25 (76%)
 Frame = +3

Query: 363 LLLLVIQERQGNELFPWVIS*LLVV 437
           LLLL IQ+R+G  LF  VI+ LL+V
Sbjct: 410 LLLLTIQDRRGQRLFERVITALLLV 434

>TRPH_SALTY (O54453) Protein trpH|
          Length = 293

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
 Frame = -3

Query: 377 NEQQQLRELS*SKLCWRSGVGSSTRFAWIGEDFLEP--WNELGRNGFLSAGAWEMMWSKS 204
           NE+ QL  L+     W S          +G DF +P  W ELGR  +L AG  E +W   
Sbjct: 238 NERTQLATLARQHHLWAS----------LGSDFHQPCPWIELGRKLWLPAGV-EGVWQTW 286

Query: 203 DQ 198
           +Q
Sbjct: 287 EQ 288

>AREH_SCHPO (Q10269) Probable sterol O-acyltransferase (EC 2.3.1.26)|
           (Sterol-ester synthase)
          Length = 537

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 18/59 (30%), Positives = 22/59 (37%)
 Frame = +2

Query: 62  TLRWTTAPLPQPKLRTPCNSARTPPSHLPAKNTPEIFFVRKRRGNIGQIYSTSFPMHRH 238
           T R    P P   + T  N     PS    K  PE   V K +G+        FP+ RH
Sbjct: 4   TPRILITPSPLSDISTTINKPNVHPSMSLLKALPECRLVVKSKGDKNNANVVEFPLDRH 62

>MNTH_MYCTU (O05916) Probable manganese transport protein mntH|
          Length = 428

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 15/25 (60%), Positives = 19/25 (76%)
 Frame = +3

Query: 363 LLLLVIQERQGNELFPWVIS*LLVV 437
           LLLL IQ+R+G  LF  VI+ LL+V
Sbjct: 154 LLLLTIQDRRGQRLFERVITALLLV 178

>Y403_RALSO (Q8Y2D3) UPF0042 protein RSc0403|
          Length = 296

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
 Frame = +3

Query: 243 ETVPAQFIPRFQEILADPGKSC*ATHTGAPTKFAS*Q----LPELLLLVIQERQGNELF 407
           + +PAQFIP     LAD G     TH G  T   S +    +PE +  + +E     LF
Sbjct: 30  DNLPAQFIPELARYLADQG----YTHLGVATDIRSRESLRKVPETITQLRKEHDVRMLF 84

>GPMI_GEOSL (Q747Q8) 2,3-bisphosphoglycerate-independent phosphoglycerate|
           mutase (EC 5.4.2.1) (Phosphoglyceromutase)
           (BPG-independent PGAM) (iPGM)
          Length = 513

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 10/61 (16%)
 Frame = -2

Query: 186 LFRTKKISGVFFAGRWDG---------GVLAELQGVLS-FGWGRGAVVQRRVWSMDIGIG 37
           L R + +  VF     DG         G LAEL+  +   G+GR A V  R W+MD    
Sbjct: 134 LARRQGVKDVFVHAFLDGRDTPPSSGAGYLAELEAEIGRIGFGRVATVMGRYWAMDRDNR 193

Query: 36  W 34
           W
Sbjct: 194 W 194

>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1|
          Length = 888

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
 Frame = +2

Query: 89  PQPKLRTPCNSARTPPSHLPAKNTPEIFFVRKRRGNIGQI--YSTSFPMHRH*GNRSGPV 262
           P P+ RTP      PP H  +++      VR+RR +   +   S+S    R       P 
Sbjct: 317 PSPRRRTPPRRMPPPPRHRRSRSP-----VRRRRRSSASLSGSSSSSSSSRSRSPPKKPP 371

Query: 263 HSTVPGNPRRSRQI 304
             TV   PR++R++
Sbjct: 372 KRTVSSPPRKTRRL 385

>GAG_SMRVH (P21411) Gag polyprotein [Contains: Core protein p19; Core protein|
           p16; Probable core protein p35; Probable core protein
           p10]
          Length = 739

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +2

Query: 80  APLPQPKLRTPCNSARTPPSHLP 148
           A L  P +++P + A TPP HLP
Sbjct: 166 ATLTDPPIQSPHSRAHTPPQHLP 188


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,802,976
Number of Sequences: 219361
Number of extensions: 1819102
Number of successful extensions: 5971
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 5634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5966
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3246866728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)