ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl03c07 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 161 bits (81), Expect = 2e-36 Identities = 117/129 (90%) Strand = Plus / Minus Query: 270 gccggggaggcctcgctggggcgccatctggcgcgccggctcgtgcaggtcggcgtcagc 329 ||||| ||||| |||||||| || || |||||| | ||||| |||||||| ||||||||| Sbjct: 10192443 gccggcgaggcgtcgctgggacggcacctggcgaggcggctggtgcaggtgggcgtcagc 10192384 Query: 330 gacgtcttcgccgtgcccggggacttcaacctcacgctgctcgaccacctcgtcgccgag 389 ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 10192383 gacgtgttcgccgtgcccggggacttcaacctcacgctgctcgaccacctgatcgccgag 10192324 Query: 390 cccgggctg 398 ||||||||| Sbjct: 10192323 cccgggctg 10192315 Score = 81.8 bits (41), Expect = 2e-12 Identities = 80/93 (86%) Strand = Plus / Minus Query: 149 gatggacacccacatcgggtccgtcgacgggccgtcgccggcggcggtgaacggcgcggt 208 |||||| ||||| ||||| ||||| |||||| || || ||||||||| ||||||||||| Sbjct: 10192564 gatggagacccatatcggatccgtggacggggcggcggcggcggcggacaacggcgcggt 10192505 Query: 209 gggatgcccggcgtccgcgccggggtgcccgat 241 ||| ||||||||||| ||| |||||||||||| Sbjct: 10192504 ggggtgcccggcgtcggcggtggggtgcccgat 10192472
>gb|AC137072.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0045E22, from chromosome 3, complete sequence Length = 160920 Score = 161 bits (81), Expect = 2e-36 Identities = 117/129 (90%) Strand = Plus / Minus Query: 270 gccggggaggcctcgctggggcgccatctggcgcgccggctcgtgcaggtcggcgtcagc 329 ||||| ||||| |||||||| || || |||||| | ||||| |||||||| ||||||||| Sbjct: 53856 gccggcgaggcgtcgctgggacggcacctggcgaggcggctggtgcaggtgggcgtcagc 53797 Query: 330 gacgtcttcgccgtgcccggggacttcaacctcacgctgctcgaccacctcgtcgccgag 389 ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 53796 gacgtgttcgccgtgcccggggacttcaacctcacgctgctcgaccacctgatcgccgag 53737 Query: 390 cccgggctg 398 ||||||||| Sbjct: 53736 cccgggctg 53728 Score = 81.8 bits (41), Expect = 2e-12 Identities = 80/93 (86%) Strand = Plus / Minus Query: 149 gatggacacccacatcgggtccgtcgacgggccgtcgccggcggcggtgaacggcgcggt 208 |||||| ||||| ||||| ||||| |||||| || || ||||||||| ||||||||||| Sbjct: 53977 gatggagacccatatcggatccgtggacggggcggcggcggcggcggacaacggcgcggt 53918 Query: 209 gggatgcccggcgtccgcgccggggtgcccgat 241 ||| ||||||||||| ||| |||||||||||| Sbjct: 53917 ggggtgcccggcgtcggcggtggggtgcccgat 53885
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 161 bits (81), Expect = 2e-36 Identities = 117/129 (90%) Strand = Plus / Minus Query: 270 gccggggaggcctcgctggggcgccatctggcgcgccggctcgtgcaggtcggcgtcagc 329 ||||| ||||| |||||||| || || |||||| | ||||| |||||||| ||||||||| Sbjct: 10190544 gccggcgaggcgtcgctgggacggcacctggcgaggcggctggtgcaggtgggcgtcagc 10190485 Query: 330 gacgtcttcgccgtgcccggggacttcaacctcacgctgctcgaccacctcgtcgccgag 389 ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 10190484 gacgtgttcgccgtgcccggggacttcaacctcacgctgctcgaccacctgatcgccgag 10190425 Query: 390 cccgggctg 398 ||||||||| Sbjct: 10190424 cccgggctg 10190416 Score = 81.8 bits (41), Expect = 2e-12 Identities = 80/93 (86%) Strand = Plus / Minus Query: 149 gatggacacccacatcgggtccgtcgacgggccgtcgccggcggcggtgaacggcgcggt 208 |||||| ||||| ||||| ||||| |||||| || || ||||||||| ||||||||||| Sbjct: 10190665 gatggagacccatatcggatccgtggacggggcggcggcggcggcggacaacggcgcggt 10190606 Query: 209 gggatgcccggcgtccgcgccggggtgcccgat 241 ||| ||||||||||| ||| |||||||||||| Sbjct: 10190605 ggggtgcccggcgtcggcggtggggtgcccgat 10190573
>dbj|AK119500.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E07, full insert sequence Length = 1331 Score = 161 bits (81), Expect = 2e-36 Identities = 117/129 (90%) Strand = Plus / Plus Query: 270 gccggggaggcctcgctggggcgccatctggcgcgccggctcgtgcaggtcggcgtcagc 329 ||||| ||||| |||||||| || || |||||| | ||||| |||||||| ||||||||| Sbjct: 291 gccggcgaggcgtcgctgggacggcacctggcgaggcggctggtgcaggtgggcgtcagc 350 Query: 330 gacgtcttcgccgtgcccggggacttcaacctcacgctgctcgaccacctcgtcgccgag 389 ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 351 gacgtgttcgccgtgcccggggacttcaacctcacgctgctcgaccacctgatcgccgag 410 Query: 390 cccgggctg 398 ||||||||| Sbjct: 411 cccgggctg 419 Score = 81.8 bits (41), Expect = 2e-12 Identities = 80/93 (86%) Strand = Plus / Plus Query: 149 gatggacacccacatcgggtccgtcgacgggccgtcgccggcggcggtgaacggcgcggt 208 |||||| ||||| ||||| ||||| |||||| || || ||||||||| ||||||||||| Sbjct: 170 gatggagacccatatcggatccgtggacggggcggcggcggcggcggacaacggcgcggt 229 Query: 209 gggatgcccggcgtccgcgccggggtgcccgat 241 ||| ||||||||||| ||| |||||||||||| Sbjct: 230 ggggtgcccggcgtcggcggtggggtgcccgat 262
>dbj|AK101594.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051F01, full insert sequence Length = 2159 Score = 161 bits (81), Expect = 2e-36 Identities = 117/129 (90%) Strand = Plus / Plus Query: 270 gccggggaggcctcgctggggcgccatctggcgcgccggctcgtgcaggtcggcgtcagc 329 ||||| ||||| |||||||| || || |||||| | ||||| |||||||| ||||||||| Sbjct: 282 gccggcgaggcgtcgctgggacggcacctggcgaggcggctggtgcaggtgggcgtcagc 341 Query: 330 gacgtcttcgccgtgcccggggacttcaacctcacgctgctcgaccacctcgtcgccgag 389 ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 342 gacgtgttcgccgtgcccggggacttcaacctcacgctgctcgaccacctgatcgccgag 401 Query: 390 cccgggctg 398 ||||||||| Sbjct: 402 cccgggctg 410 Score = 81.8 bits (41), Expect = 2e-12 Identities = 80/93 (86%) Strand = Plus / Plus Query: 149 gatggacacccacatcgggtccgtcgacgggccgtcgccggcggcggtgaacggcgcggt 208 |||||| ||||| ||||| ||||| |||||| || || ||||||||| ||||||||||| Sbjct: 161 gatggagacccatatcggatccgtggacggggcggcggcggcggcggacaacggcgcggt 220 Query: 209 gggatgcccggcgtccgcgccggggtgcccgat 241 ||| ||||||||||| ||| |||||||||||| Sbjct: 221 ggggtgcccggcgtcggcggtggggtgcccgat 253
>gb|AY106187.1| Zea mays PCO126579 mRNA sequence Length = 2219 Score = 155 bits (78), Expect = 1e-34 Identities = 111/122 (90%) Strand = Plus / Plus Query: 273 ggggaggcctcgctggggcgccatctggcgcgccggctcgtgcaggtcggcgtcagcgac 332 |||||||| |||||||||||||| || ||||| || ||||||||||||||||||| |||| Sbjct: 279 ggggaggcgtcgctggggcgccacctcgcgcgtcgcctcgtgcaggtcggcgtcaacgac 338 Query: 333 gtcttcgccgtgcccggggacttcaacctcacgctgctcgaccacctcgtcgccgagccc 392 |||||||| || || |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 339 gtcttcgcggttccgggggacttcaacctcacgctgctcgaccacctgatcgccgagccc 398 Query: 393 gg 394 || Sbjct: 399 gg 400 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 213 tgcccggcgtccgcgccggggtgcccgat 241 ||||||||||| ||||||||||||||||| Sbjct: 210 tgcccggcgtcggcgccggggtgcccgat 238
>gb|AF370006.2| Zea mays pyruvate decarboxylase (pdc3) gene, complete cds Length = 7773 Score = 139 bits (70), Expect = 8e-30 Identities = 109/122 (89%) Strand = Plus / Plus Query: 273 ggggaggcctcgctggggcgccatctggcgcgccggctcgtgcaggtcggcgtcagcgac 332 |||||||| |||||||||||||| || ||||| || ||||||||||||||||||| ||| Sbjct: 2429 ggggaggcgtcgctggggcgccacctcgcgcgtcgcctcgtgcaggtcggcgtcaacgat 2488 Query: 333 gtcttcgccgtgcccggggacttcaacctcacgctgctcgaccacctcgtcgccgagccc 392 || ||||| || || |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 2489 gtattcgcggttccgggggacttcaacctcacgctgctcgaccacctgatcgccgagccc 2548 Query: 393 gg 394 || Sbjct: 2549 gg 2550 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 213 tgcccggcgtccgcgccggggtgcccgat 241 ||||||||||| ||||||||||||||||| Sbjct: 2360 tgcccggcgtcggcgccggggtgcccgat 2388
>gb|AF370005.1| Zea mays pyruvate decarboxylase (pdc3) mRNA, complete cds Length = 2153 Score = 139 bits (70), Expect = 8e-30 Identities = 109/122 (89%) Strand = Plus / Plus Query: 273 ggggaggcctcgctggggcgccatctggcgcgccggctcgtgcaggtcggcgtcagcgac 332 |||||||| |||||||||||||| || ||||| || ||||||||||||||||||| ||| Sbjct: 225 ggggaggcgtcgctggggcgccacctcgcgcgtcgcctcgtgcaggtcggcgtcaacgat 284 Query: 333 gtcttcgccgtgcccggggacttcaacctcacgctgctcgaccacctcgtcgccgagccc 392 || ||||| || || |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 285 gtattcgcggttccgggggacttcaacctcacgctgctcgaccacctgatcgccgagccc 344 Query: 393 gg 394 || Sbjct: 345 gg 346 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 213 tgcccggcgtccgcgccggggtgcccgat 241 ||||||||||| ||||||||||||||||| Sbjct: 156 tgcccggcgtcggcgccggggtgcccgat 184
>gb|U38199.1|OSU38199 Oryza sativa pyruvate decarboxylase 2 (pdc2) gene, complete cds Length = 5526 Score = 135 bits (68), Expect = 1e-28 Identities = 111/124 (89%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 271 ccggggaggcctcgctggggcgccatctggcgcgccggctcgtgcaggtcggcgtcagcg 330 |||| ||||| |||||||| || || |||||| | ||||| |||||||| |||||||||| Sbjct: 2500 ccggcgaggcgtcgctgggacggcacctggcgaggcggctggtgcaggtgggcgtcagcg 2559 Query: 331 acgtcttcgccgtgcccggggacttcaacctcacgctgctcgaccacctcgtcgccgagc 390 |||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 2560 acgtgttcgc-gtgcccggggacttcaacctcacgctgctcgaccacctgatcgccgagc 2618 Query: 391 ccgg 394 |||| Sbjct: 2619 ccgg 2622 Score = 81.8 bits (41), Expect = 2e-12 Identities = 80/93 (86%) Strand = Plus / Plus Query: 149 gatggacacccacatcgggtccgtcgacgggccgtcgccggcggcggtgaacggcgcggt 208 |||||| ||||| ||||| ||||| |||||| || || ||||||||| ||||||||||| Sbjct: 2380 gatggagacccatatcggatccgtggacggggcggcggcggcggcggacaacggcgcggt 2439 Query: 209 gggatgcccggcgtccgcgccggggtgcccgat 241 ||| ||||||||||| ||| |||||||||||| Sbjct: 2440 ggggtgcccggcgtcggcggtggggtgcccgat 2472
>gb|U27350.1|OSU27350 Oryza sativa pyruvate decarboxylase 2 (Pdc2) mRNA, complete cds Length = 2140 Score = 135 bits (68), Expect = 1e-28 Identities = 111/124 (89%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 271 ccggggaggcctcgctggggcgccatctggcgcgccggctcgtgcaggtcggcgtcagcg 330 |||| ||||| |||||||| || || |||||| | ||||| |||||||| |||||||||| Sbjct: 259 ccggcgaggcgtcgctgggacggcacctggcgaggcggctggtgcaggtgggcgtcagcg 318 Query: 331 acgtcttcgccgtgcccggggacttcaacctcacgctgctcgaccacctcgtcgccgagc 390 |||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 319 acgtgttcgc-gtgcccggggacttcaacctcacgctgctcgaccacctgatcgccgagc 377 Query: 391 ccgg 394 |||| Sbjct: 378 ccgg 381 Score = 81.8 bits (41), Expect = 2e-12 Identities = 80/93 (86%) Strand = Plus / Plus Query: 149 gatggacacccacatcgggtccgtcgacgggccgtcgccggcggcggtgaacggcgcggt 208 |||||| ||||| ||||| ||||| |||||| || || ||||||||| ||||||||||| Sbjct: 139 gatggagacccatatcggatccgtggacggggcggcggcggcggcggacaacggcgcggt 198 Query: 209 gggatgcccggcgtccgcgccggggtgcccgat 241 ||| ||||||||||| ||| |||||||||||| Sbjct: 199 ggggtgcccggcgtcggcggtggggtgcccgat 231
>ref|NM_197032.1| Oryza sativa (japonica cultivar-group) putative pyruvate decarboxylase (OSJNBa0093B11.15), mRNA Length = 1068 Score = 129 bits (65), Expect = 7e-27 Identities = 89/97 (91%) Strand = Plus / Plus Query: 298 tggcgcgccggctcgtgcaggtcggcgtcagcgacgtcttcgccgtgcccggggacttca 357 |||||| ||| ||||||||||| ||||||||| ||||||||||| ||||||||||||| | Sbjct: 86 tggcgcaccgcctcgtgcaggtgggcgtcagcaacgtcttcgccatgcccggggacttga 145 Query: 358 acctcacgctgctcgaccacctcgtcgccgagcccgg 394 |||||||||| |||||||||||| ||||||||||||| Sbjct: 146 acctcacgcttctcgaccacctcatcgccgagcccgg 182
>gb|AC024594.9| Oryza sativa chromosome 10 BAC OSJNBa0093B11 genomic sequence, complete sequence Length = 178692 Score = 129 bits (65), Expect = 7e-27 Identities = 89/97 (91%) Strand = Plus / Minus Query: 298 tggcgcgccggctcgtgcaggtcggcgtcagcgacgtcttcgccgtgcccggggacttca 357 |||||| ||| ||||||||||| ||||||||| ||||||||||| ||||||||||||| | Sbjct: 68967 tggcgcaccgcctcgtgcaggtgggcgtcagcaacgtcttcgccatgcccggggacttga 68908 Query: 358 acctcacgctgctcgaccacctcgtcgccgagcccgg 394 |||||||||| |||||||||||| ||||||||||||| Sbjct: 68907 acctcacgcttctcgaccacctcatcgccgagcccgg 68871
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 129 bits (65), Expect = 7e-27 Identities = 89/97 (91%) Strand = Plus / Plus Query: 298 tggcgcgccggctcgtgcaggtcggcgtcagcgacgtcttcgccgtgcccggggacttca 357 |||||| ||| ||||||||||| ||||||||| ||||||||||| ||||||||||||| | Sbjct: 17605664 tggcgcaccgcctcgtgcaggtgggcgtcagcaacgtcttcgccatgcccggggacttga 17605723 Query: 358 acctcacgctgctcgaccacctcgtcgccgagcccgg 394 |||||||||| |||||||||||| ||||||||||||| Sbjct: 17605724 acctcacgcttctcgaccacctcatcgccgagcccgg 17605760 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 92 tgccgctcccgctcccgctcc 112 ||||||||||||||||||||| Sbjct: 4143316 tgccgctcccgctcccgctcc 4143296 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 gccgctcccgctcccgctcc 112 |||||||||||||||||||| Sbjct: 19438089 gccgctcccgctcccgctcc 19438070
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 129 bits (65), Expect = 7e-27 Identities = 89/97 (91%) Strand = Plus / Plus Query: 298 tggcgcgccggctcgtgcaggtcggcgtcagcgacgtcttcgccgtgcccggggacttca 357 |||||| ||| ||||||||||| ||||||||| ||||||||||| ||||||||||||| | Sbjct: 17614704 tggcgcaccgcctcgtgcaggtgggcgtcagcaacgtcttcgccatgcccggggacttga 17614763 Query: 358 acctcacgctgctcgaccacctcgtcgccgagcccgg 394 |||||||||| |||||||||||| ||||||||||||| Sbjct: 17614764 acctcacgcttctcgaccacctcatcgccgagcccgg 17614800 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 92 tgccgctcccgctcccgctcc 112 ||||||||||||||||||||| Sbjct: 4144137 tgccgctcccgctcccgctcc 4144117 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 gccgctcccgctcccgctcc 112 |||||||||||||||||||| Sbjct: 19449365 gccgctcccgctcccgctcc 19449346
>ref|NM_186185.1| Oryza sativa (japonica cultivar-group), mRNA Length = 966 Score = 127 bits (64), Expect = 3e-26 Identities = 94/104 (90%) Strand = Plus / Minus Query: 291 cgccatctggcgcgccggctcgtgcaggtcggcgtcagcgacgtcttcgccgtgcccggg 350 ||||| |||||| |||| ||||||||||| ||| | |||||||||||||||||||||||| Sbjct: 714 cgccacctggcgtgccgcctcgtgcaggtgggcattagcgacgtcttcgccgtgcccggg 655 Query: 351 gacttcaacctcacgctgctcgaccacctcgtcgccgagcccgg 394 ||||| ||||||||||| |||||||||||| |||| |||||||| Sbjct: 654 gacttgaacctcacgcttctcgaccacctcatcgctgagcccgg 611
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 127 bits (64), Expect = 3e-26 Identities = 94/104 (90%) Strand = Plus / Plus Query: 291 cgccatctggcgcgccggctcgtgcaggtcggcgtcagcgacgtcttcgccgtgcccggg 350 ||||| |||||| |||| ||||||||||| ||| | |||||||||||||||||||||||| Sbjct: 618035 cgccacctggcgtgccgcctcgtgcaggtgggcattagcgacgtcttcgccgtgcccggg 618094 Query: 351 gacttcaacctcacgctgctcgaccacctcgtcgccgagcccgg 394 ||||| ||||||||||| |||||||||||| |||| |||||||| Sbjct: 618095 gacttgaacctcacgcttctcgaccacctcatcgctgagcccgg 618138 Score = 105 bits (53), Expect = 1e-19 Identities = 80/89 (89%) Strand = Plus / Plus Query: 309 ctcgtgcaggtcggcgtcagcgacgtcttcgccgtgcccggggacttcaacctcacgctg 368 ||||||||||| ||||| |||||||| ||||||||||| |||||||||||||| ||||| Sbjct: 29436576 ctcgtgcaggtgggcgtgagcgacgtgttcgccgtgccgggggacttcaacctgacgctt 29436635 Query: 369 ctcgaccacctcgtcgccgagcccgggct 397 || |||||||| |||||||||||||||| Sbjct: 29436636 ctggaccacctgatcgccgagcccgggct 29436664 Score = 44.1 bits (22), Expect = 0.34 Identities = 28/30 (93%) Strand = Plus / Minus Query: 83 cgccccctctgccgctcccgctcccgctcc 112 ||||||| || ||||||||||||||||||| Sbjct: 9070893 cgcccccgctcccgctcccgctcccgctcc 9070864 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 ggccgtcgccggcggcggtg 197 |||||||||||||||||||| Sbjct: 5925525 ggccgtcgccggcggcggtg 5925544
>dbj|AP003746.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1123_C12 Length = 114309 Score = 127 bits (64), Expect = 3e-26 Identities = 94/104 (90%) Strand = Plus / Plus Query: 291 cgccatctggcgcgccggctcgtgcaggtcggcgtcagcgacgtcttcgccgtgcccggg 350 ||||| |||||| |||| ||||||||||| ||| | |||||||||||||||||||||||| Sbjct: 52537 cgccacctggcgtgccgcctcgtgcaggtgggcattagcgacgtcttcgccgtgcccggg 52596 Query: 351 gacttcaacctcacgctgctcgaccacctcgtcgccgagcccgg 394 ||||| ||||||||||| |||||||||||| |||| |||||||| Sbjct: 52597 gacttgaacctcacgcttctcgaccacctcatcgctgagcccgg 52640
>gb|AC120533.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0081F16 map E50055S, complete sequence Length = 148220 Score = 123 bits (62), Expect = 5e-25 Identities = 80/86 (93%) Strand = Plus / Plus Query: 309 ctcgtgcaggtcggcgtcagcgacgtcttcgccgtgcccggggacttcaacctcacgctg 368 ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| | Sbjct: 133032 ctcgtgcaggtgggcgtcagcgacgtcttcgccgtgcccggggacttgaacctcacgatt 133091 Query: 369 ctcgaccacctcgtcgccgagcccgg 394 ||| |||||||| ||||||||||||| Sbjct: 133092 ctcaaccacctcatcgccgagcccgg 133117
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 123 bits (62), Expect = 5e-25 Identities = 80/86 (93%) Strand = Plus / Plus Query: 309 ctcgtgcaggtcggcgtcagcgacgtcttcgccgtgcccggggacttcaacctcacgctg 368 ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| | Sbjct: 3127662 ctcgtgcaggtgggcgtcagcgacgtcttcgccgtgcccggggacttgaacctcacgatt 3127721 Query: 369 ctcgaccacctcgtcgccgagcccgg 394 ||| |||||||| ||||||||||||| Sbjct: 3127722 ctcaaccacctcatcgccgagcccgg 3127747 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 gccgctcccgctcccgctcc 112 |||||||||||||||||||| Sbjct: 2800670 gccgctcccgctcccgctcc 2800651
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 123 bits (62), Expect = 5e-25 Identities = 80/86 (93%) Strand = Plus / Plus Query: 309 ctcgtgcaggtcggcgtcagcgacgtcttcgccgtgcccggggacttcaacctcacgctg 368 ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| | Sbjct: 3136693 ctcgtgcaggtgggcgtcagcgacgtcttcgccgtgcccggggacttgaacctcacgatt 3136752 Query: 369 ctcgaccacctcgtcgccgagcccgg 394 ||| |||||||| ||||||||||||| Sbjct: 3136753 ctcaaccacctcatcgccgagcccgg 3136778 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 gccgctcccgctcccgctcc 112 |||||||||||||||||||| Sbjct: 2809701 gccgctcccgctcccgctcc 2809682
>gb|AC121364.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0052E20, complete sequence Length = 162434 Score = 113 bits (57), Expect = 4e-22 Identities = 81/89 (91%) Strand = Plus / Plus Query: 309 ctcgtgcaggtcggcgtcagcgacgtcttcgccgtgcccggggacttcaacctcacgctg 368 ||||||||| |||||| || |||||| |||||||| |||||||||||||||||||| ||| Sbjct: 24630 ctcgtgcagatcggcgccaccgacgtgttcgccgtccccggggacttcaacctcaccctg 24689 Query: 369 ctcgaccacctcgtcgccgagcccgggct 397 |||||| ||||| |||||||||||||||| Sbjct: 24690 ctcgactacctcatcgccgagcccgggct 24718 Score = 113 bits (57), Expect = 4e-22 Identities = 81/89 (91%) Strand = Plus / Plus Query: 309 ctcgtgcaggtcggcgtcagcgacgtcttcgccgtgcccggggacttcaacctcacgctg 368 ||||||||| |||||| || |||||| |||||||| |||||||||||||||||||| ||| Sbjct: 17960 ctcgtgcagatcggcgccaccgacgtgttcgccgtccccggggacttcaacctcaccctg 18019 Query: 369 ctcgaccacctcgtcgccgagcccgggct 397 |||||| ||||| |||||||||||||||| Sbjct: 18020 ctcgactacctcatcgccgagcccgggct 18048
>gb|AC112159.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1058_C01, complete sequence Length = 114236 Score = 113 bits (57), Expect = 4e-22 Identities = 81/89 (91%) Strand = Plus / Plus Query: 309 ctcgtgcaggtcggcgtcagcgacgtcttcgccgtgcccggggacttcaacctcacgctg 368 ||||||||| |||||| || |||||| |||||||| |||||||||||||||||||| ||| Sbjct: 112651 ctcgtgcagatcggcgccaccgacgtgttcgccgtccccggggacttcaacctcaccctg 112710 Query: 369 ctcgaccacctcgtcgccgagcccgggct 397 |||||| ||||| |||||||||||||||| Sbjct: 112711 ctcgactacctcatcgccgagcccgggct 112739
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 113 bits (57), Expect = 4e-22 Identities = 81/89 (91%) Strand = Plus / Plus Query: 309 ctcgtgcaggtcggcgtcagcgacgtcttcgccgtgcccggggacttcaacctcacgctg 368 ||||||||| |||||| || |||||| |||||||| |||||||||||||||||||| ||| Sbjct: 22920617 ctcgtgcagatcggcgccaccgacgtgttcgccgtccccggggacttcaacctcaccctg 22920676 Query: 369 ctcgaccacctcgtcgccgagcccgggct 397 |||||| ||||| |||||||||||||||| Sbjct: 22920677 ctcgactacctcatcgccgagcccgggct 22920705 Score = 113 bits (57), Expect = 4e-22 Identities = 81/89 (91%) Strand = Plus / Plus Query: 309 ctcgtgcaggtcggcgtcagcgacgtcttcgccgtgcccggggacttcaacctcacgctg 368 ||||||||| |||||| || |||||| |||||||| |||||||||||||||||||| ||| Sbjct: 22913947 ctcgtgcagatcggcgccaccgacgtgttcgccgtccccggggacttcaacctcaccctg 22914006 Query: 369 ctcgaccacctcgtcgccgagcccgggct 397 |||||| ||||| |||||||||||||||| Sbjct: 22914007 ctcgactacctcatcgccgagcccgggct 22914035 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 92 tgccgctcccgctcccgctcc 112 ||||||||||||||||||||| Sbjct: 26884629 tgccgctcccgctcccgctcc 26884609
>dbj|AB040742.1| Oryza sativa RRJ2 premature mRNA for pyruvate decarboxylase, partial cds Length = 2233 Score = 113 bits (57), Expect = 4e-22 Identities = 81/89 (91%) Strand = Plus / Plus Query: 309 ctcgtgcaggtcggcgtcagcgacgtcttcgccgtgcccggggacttcaacctcacgctg 368 ||||||||| |||||| || |||||| |||||||| |||||||||||||||||||| ||| Sbjct: 210 ctcgtgcagatcggcgccaccgacgtgttcgccgtccccggggacttcaacctcaccctg 269 Query: 369 ctcgaccacctcgtcgccgagcccgggct 397 |||||| ||||| |||||||||||||||| Sbjct: 270 ctcgactacctcatcgccgagcccgggct 298
>dbj|AK101272.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033033A07, full insert sequence Length = 2203 Score = 113 bits (57), Expect = 4e-22 Identities = 81/89 (91%) Strand = Plus / Plus Query: 309 ctcgtgcaggtcggcgtcagcgacgtcttcgccgtgcccggggacttcaacctcacgctg 368 ||||||||| |||||| || |||||| |||||||| |||||||||||||||||||| ||| Sbjct: 277 ctcgtgcagatcggcgccaccgacgtgttcgccgtccccggggacttcaacctcaccctg 336 Query: 369 ctcgaccacctcgtcgccgagcccgggct 397 |||||| ||||| |||||||||||||||| Sbjct: 337 ctcgactacctcatcgccgagcccgggct 365
>dbj|AK100501.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099J05, full insert sequence Length = 3062 Score = 113 bits (57), Expect = 4e-22 Identities = 81/89 (91%) Strand = Plus / Plus Query: 309 ctcgtgcaggtcggcgtcagcgacgtcttcgccgtgcccggggacttcaacctcacgctg 368 ||||||||| |||||| || |||||| |||||||| |||||||||||||||||||| ||| Sbjct: 1015 ctcgtgcagatcggcgccaccgacgtgttcgccgtccccggggacttcaacctcaccctg 1074 Query: 369 ctcgaccacctcgtcgccgagcccgggct 397 |||||| ||||| |||||||||||||||| Sbjct: 1075 ctcgactacctcatcgccgagcccgggct 1103
>gb|U26660.1|OSU26660 Oryza sativa pyruvate decarboxylase (Pdc1) gene, complete cds Length = 4233 Score = 113 bits (57), Expect = 4e-22 Identities = 81/89 (91%) Strand = Plus / Plus Query: 309 ctcgtgcaggtcggcgtcagcgacgtcttcgccgtgcccggggacttcaacctcacgctg 368 ||||||||| |||||| || |||||| |||||||| |||||||||||||||||||| ||| Sbjct: 1480 ctcgtgcagatcggcgccaccgacgtgttcgccgtccccggggacttcaacctcaccctg 1539 Query: 369 ctcgaccacctcgtcgccgagcccgggct 397 |||||| ||||| |||||||||||||||| Sbjct: 1540 ctcgactacctcatcgccgagcccgggct 1568
>gb|U07339.1|OSU07339 Oryza sativa pyruvate decarboxylase 1 (pdc1) mRNA, complete cds Length = 2128 Score = 113 bits (57), Expect = 4e-22 Identities = 81/89 (91%) Strand = Plus / Plus Query: 309 ctcgtgcaggtcggcgtcagcgacgtcttcgccgtgcccggggacttcaacctcacgctg 368 ||||||||| |||||| || |||||| |||||||| |||||||||||||||||||| ||| Sbjct: 265 ctcgtgcagatcggcgccaccgacgtgttcgccgtccccggggacttcaacctcaccctg 324 Query: 369 ctcgaccacctcgtcgccgagcccgggct 397 |||||| ||||| |||||||||||||||| Sbjct: 325 ctcgactacctcatcgccgagcccgggct 353
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 111 bits (56), Expect = 2e-21 Identities = 92/104 (88%) Strand = Plus / Minus Query: 291 cgccatctggcgcgccggctcgtgcaggtcggcgtcagcgacgtcttcgccgtgcccggg 350 ||||| ||||||| ||| ||||||||||| ||||||||| ||||||||||| |||||||| Sbjct: 12318832 cgccacctggcgcaccgcctcgtgcaggtgggcgtcagcaacgtcttcgccatgcccggg 12318773 Query: 351 gacttcaacctcacgctgctcgaccacctcgtcgccgagcccgg 394 ||||| || || ||||| ||||| |||||| ||||||||||||| Sbjct: 12318772 gacttgaaactgacgcttctcgatcacctcatcgccgagcccgg 12318729 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Minus Query: 328 gcgacgtcttcgccgtgcccggggacttcaacctcacgct 367 |||||||||||||| || | |||||||| ||||||||||| Sbjct: 10292775 gcgacgtcttcgccatgtcgggggactttaacctcacgct 10292736
>dbj|AP005872.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1168F12 Length = 141524 Score = 111 bits (56), Expect = 2e-21 Identities = 92/104 (88%) Strand = Plus / Minus Query: 291 cgccatctggcgcgccggctcgtgcaggtcggcgtcagcgacgtcttcgccgtgcccggg 350 ||||| ||||||| ||| ||||||||||| ||||||||| ||||||||||| |||||||| Sbjct: 102386 cgccacctggcgcaccgcctcgtgcaggtgggcgtcagcaacgtcttcgccatgcccggg 102327 Query: 351 gacttcaacctcacgctgctcgaccacctcgtcgccgagcccgg 394 ||||| || || ||||| ||||| |||||| ||||||||||||| Sbjct: 102326 gacttgaaactgacgcttctcgatcacctcatcgccgagcccgg 102283
>emb|X59546.1|ZMPDCMRNA Z.mays Pdc mRNA for pyruvate decarboxylase Length = 4040 Score = 109 bits (55), Expect = 7e-21 Identities = 85/95 (89%) Strand = Plus / Plus Query: 297 ctggcgcgccggctcgtgcaggtcggcgtcagcgacgtcttcgccgtgcccggggacttc 356 ||||||||||| ||||||||| |||||| | ||||||||||||||| || ||||||||| Sbjct: 1574 ctggcgcgccgcctcgtgcagatcggcgcctccgacgtcttcgccgtcccgggggacttc 1633 Query: 357 aacctcacgctgctcgaccacctcgtcgccgagcc 391 |||||||| ||||||||| ||||| |||||||||| Sbjct: 1634 aacctcaccctgctcgactacctcatcgccgagcc 1668
>emb|X17555.1|ZMPDCGENE Zea mays mRNA for pyruvate decarboxylase Length = 2123 Score = 109 bits (55), Expect = 7e-21 Identities = 85/95 (89%) Strand = Plus / Plus Query: 297 ctggcgcgccggctcgtgcaggtcggcgtcagcgacgtcttcgccgtgcccggggacttc 356 ||||||||||| ||||||||| |||||| | ||||||||||||||| || ||||||||| Sbjct: 187 ctggcgcgccgcctcgtgcagatcggcgcctccgacgtcttcgccgtcccgggggacttc 246 Query: 357 aacctcacgctgctcgaccacctcgtcgccgagcc 391 |||||||| ||||||||| ||||| |||||||||| Sbjct: 247 aacctcaccctgctcgactacctcatcgccgagcc 281
>ref|NM_185571.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1970 Score = 105 bits (53), Expect = 1e-19 Identities = 80/89 (89%) Strand = Plus / Plus Query: 309 ctcgtgcaggtcggcgtcagcgacgtcttcgccgtgcccggggacttcaacctcacgctg 368 ||||||||||| ||||| |||||||| ||||||||||| |||||||||||||| ||||| Sbjct: 145 ctcgtgcaggtgggcgtgagcgacgtgttcgccgtgccgggggacttcaacctgacgctt 204 Query: 369 ctcgaccacctcgtcgccgagcccgggct 397 || |||||||| |||||||||||||||| Sbjct: 205 ctggaccacctgatcgccgagcccgggct 233
>dbj|AK100678.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023113E15, full insert sequence Length = 2224 Score = 105 bits (53), Expect = 1e-19 Identities = 80/89 (89%) Strand = Plus / Plus Query: 309 ctcgtgcaggtcggcgtcagcgacgtcttcgccgtgcccggggacttcaacctcacgctg 368 ||||| ||| |||||| || |||||| |||||||| |||||||||||||||||||| ||| Sbjct: 298 ctcgtacagatcggcgccaccgacgtgttcgccgtccccggggacttcaacctcaccctg 357 Query: 369 ctcgaccacctcgtcgccgagcccgggct 397 |||||| ||||| |||||||||||||||| Sbjct: 358 ctcgactacctcatcgccgagcccgggct 386
>dbj|AK100433.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088I11, full insert sequence Length = 1970 Score = 105 bits (53), Expect = 1e-19 Identities = 80/89 (89%) Strand = Plus / Plus Query: 309 ctcgtgcaggtcggcgtcagcgacgtcttcgccgtgcccggggacttcaacctcacgctg 368 ||||||||||| ||||| |||||||| ||||||||||| |||||||||||||| ||||| Sbjct: 145 ctcgtgcaggtgggcgtgagcgacgtgttcgccgtgccgggggacttcaacctgacgctt 204 Query: 369 ctcgaccacctcgtcgccgagcccgggct 397 || |||||||| |||||||||||||||| Sbjct: 205 ctggaccacctgatcgccgagcccgggct 233
>dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0034A04 Length = 151263 Score = 105 bits (53), Expect = 1e-19 Identities = 80/89 (89%) Strand = Plus / Plus Query: 309 ctcgtgcaggtcggcgtcagcgacgtcttcgccgtgcccggggacttcaacctcacgctg 368 ||||||||||| ||||| |||||||| ||||||||||| |||||||||||||| ||||| Sbjct: 99498 ctcgtgcaggtgggcgtgagcgacgtgttcgccgtgccgggggacttcaacctgacgctt 99557 Query: 369 ctcgaccacctcgtcgccgagcccgggct 397 || |||||||| |||||||||||||||| Sbjct: 99558 ctggaccacctgatcgccgagcccgggct 99586
>dbj|AB111050.1| Oryza sativa (japonica cultivar-group) PDC3 mRNA for pyruvate decarboxylase 3, complete cds Length = 1967 Score = 105 bits (53), Expect = 1e-19 Identities = 80/89 (89%) Strand = Plus / Plus Query: 309 ctcgtgcaggtcggcgtcagcgacgtcttcgccgtgcccggggacttcaacctcacgctg 368 ||||||||||| ||||| |||||||| ||||||||||| |||||||||||||| ||||| Sbjct: 129 ctcgtgcaggtgggcgtgagcgacgtgttcgccgtgccgggggacttcaacctgacgctt 188 Query: 369 ctcgaccacctcgtcgccgagcccgggct 397 || |||||||| |||||||||||||||| Sbjct: 189 ctggaccacctgatcgccgagcccgggct 217
>gb|U07338.1|OSU07338 Oryza sativa pyruvate decarboxylase (pdc3) gene, complete cds Length = 3044 Score = 103 bits (52), Expect = 4e-19 Identities = 91/104 (87%) Strand = Plus / Plus Query: 294 catctggcgcgccggctcgtgcaggtcggcgtcagcgacgtcttcgccgtgcccggggac 353 ||||||||||| || ||||||||||| ||||| |||||||| ||||||||||| |||||| Sbjct: 1140 catctggcgcggcgcctcgtgcaggtgggcgtgagcgacgtgttcgccgtgccgggggac 1199 Query: 354 ttcaacctcacgctgctcgaccacctcgtcgccgagcccgggct 397 |||||||| || || || ||| |||| |||||||||||||||| Sbjct: 1200 ttcaacctgacccttctggactacctgatcgccgagcccgggct 1243
>gb|AY227204.1| Lotus corniculatus pyruvate decarboxylase 1 (Pdc1) mRNA, complete cds Length = 2207 Score = 101 bits (51), Expect = 2e-18 Identities = 84/95 (88%) Strand = Plus / Plus Query: 291 cgccatctggcgcgccggctcgtgcaggtcggcgtcagcgacgtcttcgccgtgcccggg 350 ||||| || |||||||| |||| |||| ||||||||| |||||| ||| |||| ||||| Sbjct: 292 cgccacctcgcgcgccgcctcgcgcagatcggcgtcaccgacgtgttctccgtccccggc 351 Query: 351 gacttcaacctcacgctgctcgaccacctcgtcgc 385 |||||||||||||||||||||||||||||| |||| Sbjct: 352 gacttcaacctcacgctgctcgaccacctcatcgc 386
>ref|NM_193629.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1485 Score = 95.6 bits (48), Expect = 1e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 313 tgcaggtcggcgtcagcgacgtcttcgccgtgcccggggacttcaacctcacgctgctcg 372 ||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 1094 tgcaggtgggcatcagcgacgtcttcgccgtgcccggggacttgaacctcacgcttctca 1153 Query: 373 accacctc 380 |||||||| Sbjct: 1154 accacctc 1161
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 95.6 bits (48), Expect = 1e-16 Identities = 63/68 (92%) Strand = Plus / Minus Query: 313 tgcaggtcggcgtcagcgacgtcttcgccgtgcccggggacttcaacctcacgctgctcg 372 ||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 22250578 tgcaggtgggcatcagcgacgtcttcgccgtgcccggggacttgaacctcacgcttctca 22250519 Query: 373 accacctc 380 |||||||| Sbjct: 22250518 accacctc 22250511 Score = 73.8 bits (37), Expect = 4e-10 Identities = 85/101 (84%) Strand = Plus / Minus Query: 274 gggaggcctcgctggggcgccatctggcgcgccggctcgtgcaggtcggcgtcagcgacg 333 |||||||| |||||||||| || || ||||| ||||| | | ||||||| | |||||| Sbjct: 3139022 gggaggccacgctggggcggcacctcgcgcggcggctggcggaggtcggggcgcgcgacg 3138963 Query: 334 tcttcgccgtgcccggggacttcaacctcacgctgctcgac 374 | ||| | ||||| ||||||||||||||||||||||||||| Sbjct: 3138962 tgttcacggtgccgggggacttcaacctcacgctgctcgac 3138922 Score = 46.1 bits (23), Expect = 0.086 Identities = 29/31 (93%) Strand = Plus / Minus Query: 82 ccgccccctctgccgctcccgctcccgctcc 112 ||||| ||||| ||||||||||||||||||| Sbjct: 42749469 ccgccgcctctcccgctcccgctcccgctcc 42749439 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 91 ctgccgctcccgctcccgctcc 112 |||||||||||||||||||||| Sbjct: 17947618 ctgccgctcccgctcccgctcc 17947597 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 94 ccgctcccgctcccgctccagcccc 118 ||||||||||||||||||| ||||| Sbjct: 29356883 ccgctcccgctcccgctcccgcccc 29356907
>dbj|AP003310.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0022F12 Length = 137716 Score = 95.6 bits (48), Expect = 1e-16 Identities = 63/68 (92%) Strand = Plus / Minus Query: 313 tgcaggtcggcgtcagcgacgtcttcgccgtgcccggggacttcaacctcacgctgctcg 372 ||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 33057 tgcaggtgggcatcagcgacgtcttcgccgtgcccggggacttgaacctcacgcttctca 32998 Query: 373 accacctc 380 |||||||| Sbjct: 32997 accacctc 32990
>gb|AY109914.1| Zea mays CL1676_1 mRNA sequence Length = 2129 Score = 87.7 bits (44), Expect = 3e-14 Identities = 81/95 (85%) Strand = Plus / Plus Query: 297 ctggcgcgccggctcgtgcaggtcggcgtcagcgacgtcttcgccgtgcccggggacttc 356 ||||||||||| ||||||||| |||||| | ||||||||||||||| || ||||| Sbjct: 187 ctggcgcgccgcctcgtgcagatcggcgcctccgacgtcttcgccgtcccnnnnnacttc 246 Query: 357 aacctcacgctgctcgaccacctcgtcgccgagcc 391 |||||||| ||||||||| ||||| |||||||||| Sbjct: 247 aacctcaccctgctcgactacctcatcgccgagcc 281
>ref|XM_479618.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1734 Score = 85.7 bits (43), Expect = 1e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 309 ctcgtgcaggtcggcgtcagcgacgtcttcgccgtgcccggggacttcaacctcacgctg 368 ||||||||||| ||||| |||||||| ||||||||||| |||||||||||||| ||||| Sbjct: 142 ctcgtgcaggtgggcgtgagcgacgtgttcgccgtgccgggggacttcaacctgacgctt 201 Query: 369 ctcgaccacct 379 || |||||||| Sbjct: 202 ctggaccacct 212
>dbj|AK071795.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023113B12, full insert sequence Length = 1731 Score = 85.7 bits (43), Expect = 1e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 309 ctcgtgcaggtcggcgtcagcgacgtcttcgccgtgcccggggacttcaacctcacgctg 368 ||||||||||| ||||| |||||||| ||||||||||| |||||||||||||| ||||| Sbjct: 142 ctcgtgcaggtgggcgtgagcgacgtgttcgccgtgccgggggacttcaacctgacgctt 201 Query: 369 ctcgaccacct 379 || |||||||| Sbjct: 202 ctggaccacct 212
>gb|AF193791.1|AF193791 Fragaria x ananassa pyruvate decarboxylase (PDC) mRNA, complete cds Length = 2141 Score = 79.8 bits (40), Expect = 6e-12 Identities = 88/104 (84%) Strand = Plus / Plus Query: 291 cgccatctggcgcgccggctcgtgcaggtcggcgtcagcgacgtcttcgccgtgcccggg 350 ||||| ||||| ||||| ||||| || ||||||||| |||||||||| |||| ||||| Sbjct: 216 cgccacctggcacgccgcctcgttcaaatcggcgtcaccgacgtcttcaccgtccccggc 275 Query: 351 gacttcaacctcacgctgctcgaccacctcgtcgccgagcccgg 394 ||||||||| | || || || ||||||||| ||||||||||||| Sbjct: 276 gacttcaacttgacccttcttgaccacctcatcgccgagcccgg 319
>ref|XM_493771.2| Oryza sativa (japonica cultivar-group), mRNA Length = 2096 Score = 73.8 bits (37), Expect = 4e-10 Identities = 85/101 (84%) Strand = Plus / Plus Query: 274 gggaggcctcgctggggcgccatctggcgcgccggctcgtgcaggtcggcgtcagcgacg 333 |||||||| |||||||||| || || ||||| ||||| | | ||||||| | |||||| Sbjct: 197 gggaggccacgctggggcggcacctcgcgcggcggctggcggaggtcggggcgcgcgacg 256 Query: 334 tcttcgccgtgcccggggacttcaacctcacgctgctcgac 374 | ||| | ||||| ||||||||||||||||||||||||||| Sbjct: 257 tgttcacggtgccgggggacttcaacctcacgctgctcgac 297
>dbj|AP002521.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0041E11 Length = 146335 Score = 73.8 bits (37), Expect = 4e-10 Identities = 85/101 (84%) Strand = Plus / Minus Query: 274 gggaggcctcgctggggcgccatctggcgcgccggctcgtgcaggtcggcgtcagcgacg 333 |||||||| |||||||||| || || ||||| ||||| | | ||||||| | |||||| Sbjct: 82810 gggaggccacgctggggcggcacctcgcgcggcggctggcggaggtcggggcgcgcgacg 82751 Query: 334 tcttcgccgtgcccggggacttcaacctcacgctgctcgac 374 | ||| | ||||| ||||||||||||||||||||||||||| Sbjct: 82750 tgttcacggtgccgggggacttcaacctcacgctgctcgac 82710
>dbj|AK069905.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023034H21, full insert sequence Length = 2096 Score = 73.8 bits (37), Expect = 4e-10 Identities = 85/101 (84%) Strand = Plus / Plus Query: 274 gggaggcctcgctggggcgccatctggcgcgccggctcgtgcaggtcggcgtcagcgacg 333 |||||||| |||||||||| || || ||||| ||||| | | ||||||| | |||||| Sbjct: 197 gggaggccacgctggggcggcacctcgcgcggcggctggcggaggtcggggcgcgcgacg 256 Query: 334 tcttcgccgtgcccggggacttcaacctcacgctgctcgac 374 | ||| | ||||| ||||||||||||||||||||||||||| Sbjct: 257 tgttcacggtgccgggggacttcaacctcacgctgctcgac 297
>dbj|AP002539.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0433F09 Length = 150150 Score = 73.8 bits (37), Expect = 4e-10 Identities = 85/101 (84%) Strand = Plus / Minus Query: 274 gggaggcctcgctggggcgccatctggcgcgccggctcgtgcaggtcggcgtcagcgacg 333 |||||||| |||||||||| || || ||||| ||||| | | ||||||| | |||||| Sbjct: 107062 gggaggccacgctggggcggcacctcgcgcggcggctggcggaggtcggggcgcgcgacg 107003 Query: 334 tcttcgccgtgcccggggacttcaacctcacgctgctcgac 374 | ||| | ||||| ||||||||||||||||||||||||||| Sbjct: 107002 tgttcacggtgccgggggacttcaacctcacgctgctcgac 106962
>gb|AF333772.1| Fragaria x ananassa cv. Chandler pyruvate decarboxylase (pdc1) gene, complete cds Length = 4304 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 291 cgccatctggcgcgccggctcgtgcaggtcggcgtcagcgacgtcttcgccgtgcccggg 350 ||||| ||||| ||||| ||||| || ||||| ||| |||||||||| |||| ||||| Sbjct: 912 cgccacctggcacgccgcctcgttcaaatcggcatcaccgacgtcttcaccgtccccggc 971 Query: 351 gacttcaacctcacgctgctcgaccacctcgtcgccgagcccgg 394 ||||||||| | || || || ||||||||| ||||||||||||| Sbjct: 972 gacttcaacttgacccttctggaccacctcatcgccgagcccgg 1015
>emb|AJ717413.1| Lotus corniculatus var. japonicus mRNA for pyruvate decarboxylase isozyme 1 (pdc1 gene), clone LjPdc1 Length = 2116 Score = 65.9 bits (33), Expect = 9e-08 Identities = 63/73 (86%) Strand = Plus / Plus Query: 319 tcggcgtcagcgacgtcttcgccgtgcccggggacttcaacctcacgctgctcgaccacc 378 |||||||||| ||||||||| |||| ||||| ||||||||| | || || |||||||||| Sbjct: 205 tcggcgtcagggacgtcttctccgttcccggcgacttcaacttaactctcctcgaccacc 264 Query: 379 tcgtcgccgagcc 391 || ||| |||||| Sbjct: 265 tcatcggcgagcc 277
>ref|XM_527118.1| PREDICTED: Pan troglodytes similar to KIAA1295 protein (LOC471740), mRNA Length = 2400 Score = 56.0 bits (28), Expect = 9e-05 Identities = 28/28 (100%) Strand = Plus / Minus Query: 88 cctctgccgctcccgctcccgctccagc 115 |||||||||||||||||||||||||||| Sbjct: 1299 cctctgccgctcccgctcccgctccagc 1272
>ref|NM_001017995.1| Homo sapiens SH3 and PX domains 2B (SH3PXD2B), mRNA Length = 7777 Score = 56.0 bits (28), Expect = 9e-05 Identities = 28/28 (100%) Strand = Plus / Minus Query: 88 cctctgccgctcccgctcccgctccagc 115 |||||||||||||||||||||||||||| Sbjct: 1806 cctctgccgctcccgctcccgctccagc 1779
>gb|AC090064.3| Homo sapiens chromosome 5 clone CTB-43C3, complete sequence Length = 124882 Score = 56.0 bits (28), Expect = 9e-05 Identities = 28/28 (100%) Strand = Plus / Plus Query: 88 cctctgccgctcccgctcccgctccagc 115 |||||||||||||||||||||||||||| Sbjct: 10801 cctctgccgctcccgctcccgctccagc 10828
>dbj|AB037716.1| Homo sapiens mRNA for KIAA1295 protein, partial cds Length = 6524 Score = 56.0 bits (28), Expect = 9e-05 Identities = 28/28 (100%) Strand = Plus / Minus Query: 88 cctctgccgctcccgctcccgctccagc 115 |||||||||||||||||||||||||||| Sbjct: 553 cctctgccgctcccgctcccgctccagc 526
>gb|AY263388.1| Dianthus caryophyllus pyruvate decarboxylase mRNA, complete cds Length = 2010 Score = 50.1 bits (25), Expect = 0.006 Identities = 52/61 (85%) Strand = Plus / Plus Query: 319 tcggcgtcagcgacgtcttcgccgtgcccggggacttcaacctcacgctgctcgaccacc 378 ||||||| | |||||||||| | || ||||| ||||||||||| || || |||||||||| Sbjct: 225 tcggcgtgaacgacgtcttctctgttcccggcgacttcaaccttactctcctcgaccacc 284 Query: 379 t 379 | Sbjct: 285 t 285
>gb|AF370004.1| Zea mays pyruvate decarboxylase (pdc2) gene, complete cds Length = 5443 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 342 gtgcccggggacttcaacctcacgctgctcgac 374 ||||| |||||||||||||||||||| |||||| Sbjct: 919 gtgccgggggacttcaacctcacgctcctcgac 951
>gb|AF370003.1| Zea mays pyruvate decarboxylase (pdc2) mRNA, complete cds Length = 2118 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 342 gtgcccggggacttcaacctcacgctgctcgac 374 ||||| |||||||||||||||||||| |||||| Sbjct: 224 gtgccgggggacttcaacctcacgctcctcgac 256
>ref|XM_603745.2| PREDICTED: Bos taurus similar to CTD-binding SR-like protein rA9 (LOC525392), mRNA Length = 4966 Score = 48.1 bits (24), Expect = 0.022 Identities = 27/28 (96%) Strand = Plus / Plus Query: 87 ccctctgccgctcccgctcccgctccag 114 |||||| ||||||||||||||||||||| Sbjct: 2837 ccctctcccgctcccgctcccgctccag 2864
>dbj|AP005091.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1104_G11 Length = 140093 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Minus Query: 328 gcgacgtcttcgccgtgcccggggacttcaacctcacgct 367 |||||||||||||| || | |||||||| ||||||||||| Sbjct: 480 gcgacgtcttcgccatgtcgggggactttaacctcacgct 441
>dbj|AP005554.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1118_A10 Length = 95161 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Minus Query: 328 gcgacgtcttcgccgtgcccggggacttcaacctcacgct 367 |||||||||||||| || | |||||||| ||||||||||| Sbjct: 93924 gcgacgtcttcgccatgtcgggggactttaacctcacgct 93885
>ref|NM_120210.2| Arabidopsis thaliana pyruvate decarboxylase AT5G01320 mRNA, complete cds Length = 1994 Score = 46.1 bits (23), Expect = 0.086 Identities = 41/47 (87%) Strand = Plus / Plus Query: 345 cccggggacttcaacctcacgctgctcgaccacctcgtcgccgagcc 391 ||||| || |||||||| || || |||||||||||| |||||||||| Sbjct: 187 cccggtgatttcaacctaactcttctcgaccacctcatcgccgagcc 233
>gb|AC102567.8| Mus musculus chromosome 9, clone RP23-224F1, complete sequence Length = 198097 Score = 46.1 bits (23), Expect = 0.086 Identities = 29/31 (93%) Strand = Plus / Plus Query: 82 ccgccccctctgccgctcccgctcccgctcc 112 |||| |||||| ||||||||||||||||||| Sbjct: 138481 ccgctccctctcccgctcccgctcccgctcc 138511
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 46.1 bits (23), Expect = 0.086 Identities = 23/23 (100%) Strand = Plus / Plus Query: 184 cgccggcggcggtgaacggcgcg 206 ||||||||||||||||||||||| Sbjct: 3853556 cgccggcggcggtgaacggcgcg 3853578
>emb|AL583921.1|MLEPRTN5 Mycobacterium leprae strain TN complete genome; segment 5/10 Length = 332450 Score = 46.1 bits (23), Expect = 0.086 Identities = 23/23 (100%) Strand = Plus / Plus Query: 187 cggcggcggtgaacggcgcggtg 209 ||||||||||||||||||||||| Sbjct: 63580 cggcggcggtgaacggcgcggtg 63602
>emb|AL161746.2|ATT10O8 Arabidopsis thaliana DNA chromosome 5, BAC clone T10O8 (ESSA project) Length = 83499 Score = 46.1 bits (23), Expect = 0.086 Identities = 41/47 (87%) Strand = Plus / Minus Query: 345 cccggggacttcaacctcacgctgctcgaccacctcgtcgccgagcc 391 ||||| || |||||||| || || |||||||||||| |||||||||| Sbjct: 19497 cccggtgatttcaacctaactcttctcgaccacctcatcgccgagcc 19451
>emb|AL049478.1|MLCL458 Mycobacterium leprae cosmid L458 Length = 43839 Score = 46.1 bits (23), Expect = 0.086 Identities = 23/23 (100%) Strand = Plus / Plus Query: 187 cggcggcggtgaacggcgcggtg 209 ||||||||||||||||||||||| Sbjct: 20314 cggcggcggtgaacggcgcggtg 20336
>gb|L78823.1|MSGB13GS Mycobacterium leprae cosmid B13 DNA sequence Length = 42923 Score = 46.1 bits (23), Expect = 0.086 Identities = 23/23 (100%) Strand = Plus / Minus Query: 187 cggcggcggtgaacggcgcggtg 209 ||||||||||||||||||||||| Sbjct: 31697 cggcggcggtgaacggcgcggtg 31675
>dbj|AP003448.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1656_A11 Length = 148887 Score = 46.1 bits (23), Expect = 0.086 Identities = 29/31 (93%) Strand = Plus / Minus Query: 82 ccgccccctctgccgctcccgctcccgctcc 112 ||||| ||||| ||||||||||||||||||| Sbjct: 82234 ccgccgcctctcccgctcccgctcccgctcc 82204
>gb|BT004248.1| Arabidopsis thaliana clone RAFL14-79-I15 (R20268) putative pyruvate decarboxylase (At5g01320) mRNA, partial cds Length = 1895 Score = 46.1 bits (23), Expect = 0.086 Identities = 41/47 (87%) Strand = Plus / Plus Query: 345 cccggggacttcaacctcacgctgctcgaccacctcgtcgccgagcc 391 ||||| || |||||||| || || |||||||||||| |||||||||| Sbjct: 72 cccggtgatttcaacctaactcttctcgaccacctcatcgccgagcc 118
>gb|AC155813.2| Mus musculus BAC clone RP24-167L2 from 9, complete sequence Length = 166097 Score = 46.1 bits (23), Expect = 0.086 Identities = 29/31 (93%) Strand = Plus / Plus Query: 82 ccgccccctctgccgctcccgctcccgctcc 112 |||| |||||| ||||||||||||||||||| Sbjct: 38881 ccgctccctctcccgctcccgctcccgctcc 38911
>gb|AC135668.5| Mus musculus BAC clone RP23-280P7 from chromosome 6, complete sequence Length = 207975 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Minus Query: 87 ccctctgccgctcccgctcccgctcc 112 |||||| ||||||||||||||||||| Sbjct: 176154 ccctctcccgctcccgctcccgctcc 176129
>ref|XM_482009.1| Oryza sativa (japonica cultivar-group), mRNA Length = 786 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 366 ctgctcgaccacctcgtcgccg 387 |||||||||||||||||||||| Sbjct: 340 ctgctcgaccacctcgtcgccg 319
>ref|XM_466956.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1833 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 366 ctgctcgaccacctcgtcgccg 387 |||||||||||||||||||||| Sbjct: 1602 ctgctcgaccacctcgtcgccg 1581
>ref|NM_193757.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 975 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 91 ctgccgctcccgctcccgctcc 112 |||||||||||||||||||||| Sbjct: 78 ctgccgctcccgctcccgctcc 99
>ref|NM_186930.2| Oryza sativa (japonica cultivar-group), mRNA Length = 2015 Score = 44.1 bits (22), Expect = 0.34 Identities = 28/30 (93%) Strand = Plus / Plus Query: 83 cgccccctctgccgctcccgctcccgctcc 112 ||||||| || ||||||||||||||||||| Sbjct: 490 cgcccccgctcccgctcccgctcccgctcc 519
>ref|XM_612879.2| PREDICTED: Bos taurus similar to Protein KIAA0853, transcript variant 1 (LOC540735), mRNA Length = 7344 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Minus Query: 87 ccctctgccgctcccgctcccgctcc 112 |||||| ||||||||||||||||||| Sbjct: 2596 ccctctcccgctcccgctcccgctcc 2571
>ref|XM_864457.1| PREDICTED: Bos taurus similar to Protein KIAA0853, transcript variant 3 (LOC540735), mRNA Length = 7503 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Minus Query: 87 ccctctgccgctcccgctcccgctcc 112 |||||| ||||||||||||||||||| Sbjct: 2755 ccctctcccgctcccgctcccgctcc 2730
>ref|XM_585928.2| PREDICTED: Bos taurus similar to Scaffold attachment factor B2 (LOC509045), mRNA Length = 2431 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 95 cgctcccgctcccgctccagcc 116 |||||||||||||||||||||| Sbjct: 1424 cgctcccgctcccgctccagcc 1403
>ref|XM_974040.1| PREDICTED: Mus musculus PHD finger protein 3, transcript variant 4 (Phf3), mRNA Length = 4180 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 91 ctgccgctcccgctcccgctcc 112 |||||||||||||||||||||| Sbjct: 1498 ctgccgctcccgctcccgctcc 1477
>ref|XM_974079.1| PREDICTED: Mus musculus PHD finger protein 3, transcript variant 5 (Phf3), mRNA Length = 4562 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 91 ctgccgctcccgctcccgctcc 112 |||||||||||||||||||||| Sbjct: 1880 ctgccgctcccgctcccgctcc 1859
>ref|XM_974113.1| PREDICTED: Mus musculus PHD finger protein 3, transcript variant 6 (Phf3), mRNA Length = 4750 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 91 ctgccgctcccgctcccgctcc 112 |||||||||||||||||||||| Sbjct: 2068 ctgccgctcccgctcccgctcc 2047
>ref|XM_974154.1| PREDICTED: Mus musculus PHD finger protein 3, transcript variant 7 (Phf3), mRNA Length = 7295 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 91 ctgccgctcccgctcccgctcc 112 |||||||||||||||||||||| Sbjct: 4613 ctgccgctcccgctcccgctcc 4592
>ref|XM_974187.1| PREDICTED: Mus musculus PHD finger protein 3, transcript variant 8 (Phf3), mRNA Length = 5869 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 91 ctgccgctcccgctcccgctcc 112 |||||||||||||||||||||| Sbjct: 3187 ctgccgctcccgctcccgctcc 3166
>ref|XM_974221.1| PREDICTED: Mus musculus PHD finger protein 3, transcript variant 9 (Phf3), mRNA Length = 7561 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 91 ctgccgctcccgctcccgctcc 112 |||||||||||||||||||||| Sbjct: 4879 ctgccgctcccgctcccgctcc 4858
>ref|XM_980418.1| PREDICTED: Mus musculus PHD finger protein 3, transcript variant 10 (Phf3), mRNA Length = 4180 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 91 ctgccgctcccgctcccgctcc 112 |||||||||||||||||||||| Sbjct: 1498 ctgccgctcccgctcccgctcc 1477
>ref|XM_980449.1| PREDICTED: Mus musculus PHD finger protein 3, transcript variant 11 (Phf3), mRNA Length = 4562 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 91 ctgccgctcccgctcccgctcc 112 |||||||||||||||||||||| Sbjct: 1880 ctgccgctcccgctcccgctcc 1859
>ref|XM_980481.1| PREDICTED: Mus musculus PHD finger protein 3, transcript variant 12 (Phf3), mRNA Length = 4750 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 91 ctgccgctcccgctcccgctcc 112 |||||||||||||||||||||| Sbjct: 2068 ctgccgctcccgctcccgctcc 2047
>ref|XM_897697.2| PREDICTED: Mus musculus PHD finger protein 3, transcript variant 9 (Phf3), mRNA Length = 7295 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 91 ctgccgctcccgctcccgctcc 112 |||||||||||||||||||||| Sbjct: 4613 ctgccgctcccgctcccgctcc 4592
>ref|XM_897637.2| PREDICTED: Mus musculus PHD finger protein 3, transcript variant 4 (Phf3), mRNA Length = 5869 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 91 ctgccgctcccgctcccgctcc 112 |||||||||||||||||||||| Sbjct: 3187 ctgccgctcccgctcccgctcc 3166
>ref|XM_129836.7| PREDICTED: Mus musculus PHD finger protein 3, transcript variant 1 (Phf3), mRNA Length = 7561 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 91 ctgccgctcccgctcccgctcc 112 |||||||||||||||||||||| Sbjct: 4879 ctgccgctcccgctcccgctcc 4858
>gb|AC125055.3| Mus musculus BAC clone RP23-397L11 from chromosome 7, complete sequence Length = 209066 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Plus Query: 87 ccctctgccgctcccgctcccgctcc 112 |||||| ||||||||||||||||||| Sbjct: 114790 ccctctcccgctcccgctcccgctcc 114815
>gb|AC124469.4| Mus musculus BAC clone RP24-172B22 from chromosome 1, complete sequence Length = 162294 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 91 ctgccgctcccgctcccgctcc 112 |||||||||||||||||||||| Sbjct: 111363 ctgccgctcccgctcccgctcc 111384
>gb|AC125175.4| Mus musculus BAC clone RP24-572I8 from chromosome 6, complete sequence Length = 167991 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Plus Query: 87 ccctctgccgctcccgctcccgctcc 112 |||||| ||||||||||||||||||| Sbjct: 137056 ccctctcccgctcccgctcccgctcc 137081
>emb|AL355377.25| Human DNA sequence from clone RP11-392A14 on chromosome 9 Contains a novel pseudogene, a glutamate-ammonia ligase (glutamine synthase) (GLUL) (GLNS) pseudogene, a tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide (YWHAZ) (KCIP-1) pseudogene, a novel gene (KIAA1045), the DNAJB5 gene for DnaJ (Hsp40) homolog, subfamily B, member 5 (Hcs40), a GCIP-interacting protein p29 (DKFZP564O2082) pseudogene, a novel gene and 3 CpG islands, complete sequence Length = 157041 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Plus Query: 87 ccctctgccgctcccgctcccgctcc 112 |||||| ||||||||||||||||||| Sbjct: 60779 ccctctcccgctcccgctcccgctcc 60804
>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29 Length = 303550 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 91 ctgccgctcccgctcccgctcc 112 |||||||||||||||||||||| Sbjct: 231716 ctgccgctcccgctcccgctcc 231737
>emb|AL928592.13| Mouse DNA sequence from clone RP24-168J7 on chromosome 4 Contains a novel pseudogene and a novel gene, complete sequence Length = 126611 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 94 ccgctcccgctcccgctccagc 115 |||||||||||||||||||||| Sbjct: 41300 ccgctcccgctcccgctccagc 41321
>gb|AC010692.4| Drosophila melanogaster 3L BAC RP98-11B23 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179164 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Minus Query: 88 cctctgccgctcccgctcccgctcca 113 ||||| |||||||||||||||||||| Sbjct: 24841 cctctcccgctcccgctcccgctcca 24816
>gb|AC108027.5| Homo sapiens BAC clone RP11-64C8 from 4, complete sequence Length = 73256 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Plus Query: 87 ccctctgccgctcccgctcccgctcc 112 |||||| ||||||||||||||||||| Sbjct: 32996 ccctctcccgctcccgctcccgctcc 33021
>gb|AC153137.4| Mus musculus BAC clone RP23-471J16 from chromosome 1, complete sequence Length = 201668 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 91 ctgccgctcccgctcccgctcc 112 |||||||||||||||||||||| Sbjct: 23211 ctgccgctcccgctcccgctcc 23232
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Plus Query: 91 ctgccgctcccgctcccgctccagcc 116 |||||||||||||| ||||||||||| Sbjct: 26172369 ctgccgctcccgctaccgctccagcc 26172394 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 366 ctgctcgaccacctcgtcgccg 387 |||||||||||||||||||||| Sbjct: 6391634 ctgctcgaccacctcgtcgccg 6391655 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 88 cctctgccgctcccgctcccgctcc 112 |||| |||||||||||||||||||| Sbjct: 25287236 cctccgccgctcccgctcccgctcc 25287260
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 366 ctgctcgaccacctcgtcgccg 387 |||||||||||||||||||||| Sbjct: 17150771 ctgctcgaccacctcgtcgccg 17150750
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 366 ctgctcgaccacctcgtcgccg 387 |||||||||||||||||||||| Sbjct: 25602499 ctgctcgaccacctcgtcgccg 25602520 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 gccgctcccgctcccgctcc 112 |||||||||||||||||||| Sbjct: 25749214 gccgctcccgctcccgctcc 25749233
>gb|AC092824.13| Homo sapiens 12 BAC RP11-158N24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 40182 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Minus Query: 87 ccctctgccgctcccgctcccgctcc 112 |||||| ||||||||||||||||||| Sbjct: 6633 ccctctcccgctcccgctcccgctcc 6608
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Minus Query: 93 gccgctcccgctcccgctccagcccc 118 |||||||||||||||||||| ||||| Sbjct: 3827470 gccgctcccgctcccgctcccgcccc 3827445 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 ccgctcccgctcccgctcca 113 |||||||||||||||||||| Sbjct: 5060119 ccgctcccgctcccgctcca 5060138
>dbj|AP003077.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0520B06 Length = 142667 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 91 ctgccgctcccgctcccgctcc 112 |||||||||||||||||||||| Sbjct: 67453 ctgccgctcccgctcccgctcc 67432
>dbj|AP003756.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1370_E02 Length = 128326 Score = 44.1 bits (22), Expect = 0.34 Identities = 28/30 (93%) Strand = Plus / Minus Query: 83 cgccccctctgccgctcccgctcccgctcc 112 ||||||| || ||||||||||||||||||| Sbjct: 61300 cgcccccgctcccgctcccgctcccgctcc 61271
>dbj|AP003755.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1354_H07 Length = 157974 Score = 44.1 bits (22), Expect = 0.34 Identities = 28/30 (93%) Strand = Plus / Minus Query: 83 cgccccctctgccgctcccgctcccgctcc 112 ||||||| || ||||||||||||||||||| Sbjct: 122336 cgcccccgctcccgctcccgctcccgctcc 122307
>dbj|AP005513.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0014E22 Length = 157627 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 366 ctgctcgaccacctcgtcgccg 387 |||||||||||||||||||||| Sbjct: 72546 ctgctcgaccacctcgtcgccg 72567
>dbj|AP004768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0010C01 Length = 186185 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 366 ctgctcgaccacctcgtcgccg 387 |||||||||||||||||||||| Sbjct: 5175 ctgctcgaccacctcgtcgccg 5196 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 gccgctcccgctcccgctcc 112 |||||||||||||||||||| Sbjct: 151890 gccgctcccgctcccgctcc 151909
>dbj|AP005389.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0091C18 Length = 154416 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 366 ctgctcgaccacctcgtcgccg 387 |||||||||||||||||||||| Sbjct: 74626 ctgctcgaccacctcgtcgccg 74605
>dbj|AP005298.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1770_H03 Length = 189893 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 366 ctgctcgaccacctcgtcgccg 387 |||||||||||||||||||||| Sbjct: 11396 ctgctcgaccacctcgtcgccg 11375
>dbj|AK104796.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-H05, full insert sequence Length = 1173 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 91 ctgccgctcccgctcccgctcc 112 |||||||||||||||||||||| Sbjct: 113 ctgccgctcccgctcccgctcc 134
>dbj|AK072814.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023141A19, full insert sequence Length = 1318 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 91 ctgccgctcccgctcccgctcc 112 |||||||||||||||||||||| Sbjct: 118 ctgccgctcccgctcccgctcc 139
>dbj|AK067947.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013124I12, full insert sequence Length = 2015 Score = 44.1 bits (22), Expect = 0.34 Identities = 28/30 (93%) Strand = Plus / Plus Query: 83 cgccccctctgccgctcccgctcccgctcc 112 ||||||| || ||||||||||||||||||| Sbjct: 490 cgcccccgctcccgctcccgctcccgctcc 519
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 366 ctgctcgaccacctcgtcgccg 387 |||||||||||||||||||||| Sbjct: 1063187 ctgctcgaccacctcgtcgccg 1063166
>gb|AE003533.4| Drosophila melanogaster chromosome 3L, section 52 of 83 of the complete sequence Length = 289141 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Plus Query: 88 cctctgccgctcccgctcccgctcca 113 ||||| |||||||||||||||||||| Sbjct: 122649 cctctcccgctcccgctcccgctcca 122674
>dbj|AK122230.1| Mus musculus mRNA for mKIAA0244 protein Length = 4250 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 91 ctgccgctcccgctcccgctcc 112 |||||||||||||||||||||| Sbjct: 2330 ctgccgctcccgctcccgctcc 2309
>dbj|AP002982.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1683C8 Length = 176644 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Plus Query: 87 ccctctgccgctcccgctcccgctcc 112 |||||| ||||||||||||||||||| Sbjct: 134067 ccctctcccgctcccgctcccgctcc 134092
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Plus Query: 91 ctgccgctcccgctcccgctccagcc 116 |||||||||||||| ||||||||||| Sbjct: 26100545 ctgccgctcccgctaccgctccagcc 26100570 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 366 ctgctcgaccacctcgtcgccg 387 |||||||||||||||||||||| Sbjct: 6391509 ctgctcgaccacctcgtcgccg 6391530 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 88 cctctgccgctcccgctcccgctcc 112 |||| |||||||||||||||||||| Sbjct: 25215412 cctccgccgctcccgctcccgctcc 25215436
>emb|AL732649.3|CNS08C9O Oryza sativa chromosome 12, . BAC OSJNBb0067N05 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 109555 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 366 ctgctcgaccacctcgtcgccg 387 |||||||||||||||||||||| Sbjct: 53182 ctgctcgaccacctcgtcgccg 53203
>emb|BX000457.2|CNS08CDE Oryza sativa chromosome 12, . BAC OJ1388_B05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 144241 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Plus Query: 91 ctgccgctcccgctcccgctccagcc 116 |||||||||||||| ||||||||||| Sbjct: 62607 ctgccgctcccgctaccgctccagcc 62632
>emb|AJ437300.2|AMY437300 Alopecurus myosuroides als gene for acetolactate synthase Length = 2038 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 320 cggcgtcagcgacgtcttcgcc 341 |||||||||||||||||||||| Sbjct: 246 cggcgtcagcgacgtcttcgcc 267
>gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 9, complete sequence Length = 1178688 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 95 cgctcccgctcccgctccagcccca 119 |||||||||||||||||| |||||| Sbjct: 44382 cgctcccgctcccgctcccgcccca 44406
>gb|AC104278.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1345_B12, complete sequence Length = 119909 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 92 tgccgctcccgctcccgctcc 112 ||||||||||||||||||||| Sbjct: 37061 tgccgctcccgctcccgctcc 37041
>ref|XM_752163.1| Ustilago maydis 521 hypothetical protein (UM01109.1) partial mRNA Length = 4137 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 94 ccgctcccgctcccgctccag 114 ||||||||||||||||||||| Sbjct: 2927 ccgctcccgctcccgctccag 2947
>ref|XM_572740.1| Cryptococcus neoformans var. neoformans JEC21 ubiquitin-like conjugating enzyme (CNI00160) partial mRNA Length = 2064 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 95 cgctcccgctcccgctccagcccca 119 |||||||||||||||||| |||||| Sbjct: 1497 cgctcccgctcccgctcccgcccca 1473
>ref|XM_807247.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein (MASP) (Tc00.1047053506703.110) partial mRNA Length = 870 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 92 tgccgctcccgctcccgctcc 112 ||||||||||||||||||||| Sbjct: 255 tgccgctcccgctcccgctcc 235
>emb|Z77665.1|CEK02E11 Caenorhabditis elegans Cosmid K02E11, complete sequence Length = 32960 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 166 ggtccgtcgacgggccgtcgccggc 190 ||||||| ||||||||||||||||| Sbjct: 14059 ggtccgtagacgggccgtcgccggc 14083
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 362 cacgctgctcgaccacctcgtcgcc 386 ||||||||| ||||||||||||||| Sbjct: 898139 cacgctgctggaccacctcgtcgcc 898115
>emb|CR932968.2| Medicago truncatula chromosome 5 clone mth2-8e17, COMPLETE SEQUENCE Length = 128179 Score = 42.1 bits (21), Expect = 1.3 Identities = 42/49 (85%) Strand = Plus / Minus Query: 329 cgacgtcttcgccgtgcccggggacttcaacctcacgctgctcgaccac 377 |||| ||||| |||| || || ||||||||||| ||| ||||||||||| Sbjct: 75257 cgacatcttcaccgtccctggtgacttcaacctgacgttgctcgaccac 75209
>gb|AE012308.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 216 of 460 of the complete genome Length = 11019 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 94 ccgctcccgctcccgctccagcccc 118 ||||||||||||||||||| ||||| Sbjct: 2696 ccgctcccgctcccgctcccgcccc 2672
>gb|AF436852.1|AF436852 Cucumis melo pyruvate decarboxylase mRNA, partial cds Length = 588 Score = 42.1 bits (21), Expect = 1.3 Identities = 42/49 (85%) Strand = Plus / Plus Query: 319 tcggcgtcagcgacgtcttcgccgtgcccggggacttcaacctcacgct 367 ||||||||| ||| |||||| |||| ||||| || || ||||||||||| Sbjct: 242 tcggcgtcaccgatgtcttcaccgtccccggcgattttaacctcacgct 290
>gb|AC078944.5|AC078944 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0089D15, from Chromosome 10, complete sequence Length = 164679 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 92 tgccgctcccgctcccgctcc 112 ||||||||||||||||||||| Sbjct: 140145 tgccgctcccgctcccgctcc 140125
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 94 ccgctcccgctcccgctccagcccc 118 ||||||||||||||||||| ||||| Sbjct: 20143300 ccgctcccgctcccgctcccgcccc 20143276
>gb|AC026172.3|AC026172 Homo sapiens chromosome 3 clone RP11-168L3 map 3p, complete sequence Length = 181598 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 88 cctctgccgctcccgctcccgctcc 112 ||||| ||||||||||||||||||| Sbjct: 36538 cctctcccgctcccgctcccgctcc 36514
>gb|AC019072.7| Homo sapiens BAC clone RP11-289A15 from 2, complete sequence Length = 148438 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 ccgctcccgctcccgctccag 114 ||||||||||||||||||||| Sbjct: 102353 ccgctcccgctcccgctccag 102333
>gb|AC007850.29|AC007850 Homo sapiens 3 BAC CTB-237N12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 157872 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 88 cctctgccgctcccgctcccgctcc 112 ||||| ||||||||||||||||||| Sbjct: 39287 cctctcccgctcccgctcccgctcc 39311
>dbj|AP003381.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0692C11 Length = 169562 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 94 ccgctcccgctcccgctccagcccc 118 ||||||||||||||||||| ||||| Sbjct: 135746 ccgctcccgctcccgctcccgcccc 135770
>dbj|AP003273.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0510F09 Length = 138277 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 94 ccgctcccgctcccgctccagcccc 118 ||||||||||||||||||| ||||| Sbjct: 51945 ccgctcccgctcccgctcccgcccc 51969
>dbj|AP003608.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0007G12 Length = 111819 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 94 ccgctcccgctcccgctccagcccc 118 ||||||||||||||||||| ||||| Sbjct: 9300 ccgctcccgctcccgctcccgcccc 9276
>dbj|AP004810.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1068H08 Length = 152794 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 94 ccgctcccgctcccgctccagcccc 118 ||||||||||||||||||| ||||| Sbjct: 131574 ccgctcccgctcccgctcccgcccc 131550
>gb|AE005054.1| Halobacterium sp. NRC-1 section 85 of 170 of the complete genome Length = 10173 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 ccgtcgacgggccgtcgccgg 189 ||||||||||||||||||||| Sbjct: 6075 ccgtcgacgggccgtcgccgg 6095
>dbj|AK122147.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033138G15, full insert sequence Length = 3697 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 88 cctctgccgctcccgctcccgctcc 112 |||| |||||||||||||||||||| Sbjct: 307 cctccgccgctcccgctcccgctcc 283
>dbj|AK107731.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-132-F08, full insert sequence Length = 519 Score = 42.1 bits (21), Expect = 1.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 187 cggcggcggtgaacggcgcggtgggatgcccggcgtc 223 ||||| ||| ||||||||||||||| |||| |||||| Sbjct: 57 cggcgccggagaacggcgcggtggggtgcctggcgtc 93
>dbj|AK065374.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013003B24, full insert sequence Length = 1884 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 94 ccgctcccgctcccgctccagcccc 118 ||||||||||||||||||| ||||| Sbjct: 1152 ccgctcccgctcccgctcccgcccc 1176
>emb|AL732535.4|CNS08C9A Oryza sativa chromosome 12, . BAC OSJNBa0035N13 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 158927 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 88 cctctgccgctcccgctcccgctcc 112 |||| |||||||||||||||||||| Sbjct: 49954 cctccgccgctcccgctcccgctcc 49930
>gb|AC026194.4| Homo sapiens chromosome 3 clone RP11-45B16 map 3p, complete sequence Length = 181604 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 88 cctctgccgctcccgctcccgctcc 112 ||||| ||||||||||||||||||| Sbjct: 36544 cctctcccgctcccgctcccgctcc 36520
>gb|AC024163.3| Homo sapiens chromosome 3 clone RP11-326O24 map 3p, complete sequence Length = 176647 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 88 cctctgccgctcccgctcccgctcc 112 ||||| ||||||||||||||||||| Sbjct: 51667 cctctcccgctcccgctcccgctcc 51691
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 214 gcccggcgtccgcgccggggtgcccgat 241 |||||||| |||||||||||||| |||| Sbjct: 773718 gcccggcggccgcgccggggtgctcgat 773745
>ref|XM_508393.1| PREDICTED: Pan troglodytes similar to glycosyltransferase-like 1B; ortholog of mouse glycosyltransferase-like 1B (LOC451151), mRNA Length = 2010 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 ctcccgctcccgctccagccccac 120 |||||||| ||||||||||||||| Sbjct: 1863 ctcccgcttccgctccagccccac 1886
>ref|XM_466986.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1732 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 gccgctcccgctcccgctcc 112 |||||||||||||||||||| Sbjct: 200 gccgctcccgctcccgctcc 219
>ref|NM_197357.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0076F20.12), mRNA Length = 1551 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 gccgctcccgctcccgctcc 112 |||||||||||||||||||| Sbjct: 42 gccgctcccgctcccgctcc 61
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 gccggctcgtgcaggtcggc 323 |||||||||||||||||||| Sbjct: 511456 gccggctcgtgcaggtcggc 511475
>ref|XM_477103.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2292 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 ggccgtcgccggcggcggtg 197 |||||||||||||||||||| Sbjct: 328 ggccgtcgccggcggcggtg 309
>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete sequence Length = 1019846 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 ctgccgctcccgctcccgct 110 |||||||||||||||||||| Sbjct: 200929 ctgccgctcccgctcccgct 200948
>gb|AC133217.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0052H02, complete sequence Length = 159632 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 gccgctcccgctcccgctcc 112 |||||||||||||||||||| Sbjct: 80477 gccgctcccgctcccgctcc 80458
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 181 cgtcgccggcggcggtgaacggcg 204 |||||||||||||||||| ||||| Sbjct: 1608479 cgtcgccggcggcggtgaccggcg 1608456
>ref|XM_360897.1| Magnaporthe grisea 70-15 hypothetical protein (MG03440.4) partial mRNA Length = 984 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 91 ctgccgctcccgctcccgctccagcccc 118 |||| ||||||||||||||||| ||||| Sbjct: 809 ctgctgctcccgctcccgctcccgcccc 836
>ref|XM_418543.1| PREDICTED: Gallus gallus similar to DNA-repair protein XRCC2 (X-ray repair cross-complementing protein 2) (LOC420438), mRNA Length = 1694 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 94 ccgctcccgctcccgctccagccc 117 ||||||||| |||||||||||||| Sbjct: 564 ccgctcccgatcccgctccagccc 541
>gb|AY881693.1| Baboon herpesvirus 2 strain 860 ICP22 (US1), US2 (US2), protein kinase (US3), glycoprotein G (US4), glycoprotein J (US5), glycoprotein D (US6), glycoprotein I (US7), glycoprotein E (US8), US8.5 (US8.5), US9 (US9), US10 (US10), tegument protein (US11), and ICP47 (US12) genes, complete cds Length = 15072 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 cccgctcccgctccagcccc 118 |||||||||||||||||||| Sbjct: 3770 cccgctcccgctccagcccc 3789
>ref|XM_880988.1| PREDICTED: Bos taurus similar to Splicing factor, arginine/serine-rich 16 (Suppressor of white-apricot homolog 2), transcript variant 5 (LOC509208), mRNA Length = 2187 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 gctcccgctcccgctccagc 115 |||||||||||||||||||| Sbjct: 1249 gctcccgctcccgctccagc 1268
>ref|XM_880966.1| PREDICTED: Bos taurus similar to Splicing factor, arginine/serine-rich 16 (Suppressor of white-apricot homolog 2), transcript variant 4 (LOC509208), mRNA Length = 1991 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 gctcccgctcccgctccagc 115 |||||||||||||||||||| Sbjct: 1249 gctcccgctcccgctccagc 1268
>ref|XM_867858.1| PREDICTED: Bos taurus similar to Splicing factor, arginine/serine-rich 16 (Suppressor of white-apricot homolog 2), transcript variant 2 (LOC509208), mRNA Length = 2476 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 gctcccgctcccgctccagc 115 |||||||||||||||||||| Sbjct: 1249 gctcccgctcccgctccagc 1268
>ref|XM_322738.1| Neurospora crassa OR74A hypothetical protein (NCU03481.1) partial mRNA Length = 4035 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 91 ctgccgctcccgctcccgctccagcccc 118 ||||| |||||||||||||||| ||||| Sbjct: 832 ctgcccctcccgctcccgctcctgcccc 805
>ref|XM_951277.1| Neurospora crassa OR74A hypothetical protein (NCU03481.1) partial mRNA Length = 4035 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 91 ctgccgctcccgctcccgctccagcccc 118 ||||| |||||||||||||||| ||||| Sbjct: 832 ctgcccctcccgctcccgctcctgcccc 805
>ref|XM_876111.1| PREDICTED: Bos taurus similar to Intersectin 1 (SH3 domain-containing protein 1A) (SH3P17), transcript variant 8 (LOC510879), mRNA Length = 5190 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 ccctctgccgctcccgctcccgct 110 |||||||||||||| ||||||||| Sbjct: 1298 ccctctgccgctccagctcccgct 1275
>ref|XM_876039.1| PREDICTED: Bos taurus similar to Intersectin 1 (SH3 domain-containing protein 1A) (SH3P17), transcript variant 7 (LOC510879), mRNA Length = 4992 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 ccctctgccgctcccgctcccgct 110 |||||||||||||| ||||||||| Sbjct: 1298 ccctctgccgctccagctcccgct 1275
>ref|XM_875828.1| PREDICTED: Bos taurus similar to Intersectin 1 (SH3 domain-containing protein 1A) (SH3P17), transcript variant 4 (LOC510879), mRNA Length = 5205 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 ccctctgccgctcccgctcccgct 110 |||||||||||||| ||||||||| Sbjct: 1298 ccctctgccgctccagctcccgct 1275
>ref|XM_865329.1| PREDICTED: Bos taurus similar to Intersectin 1 (SH3 domain-containing protein 1A) (SH3P17), transcript variant 2 (LOC510879), mRNA Length = 4505 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 ccctctgccgctcccgctcccgct 110 |||||||||||||| ||||||||| Sbjct: 1298 ccctctgccgctccagctcccgct 1275
>ref|XM_588069.2| PREDICTED: Bos taurus similar to pericentrin 2 (LOC510855), mRNA Length = 6849 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ccgctcccgctcccgctcca 113 |||||||||||||||||||| Sbjct: 1464 ccgctcccgctcccgctcca 1445
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 gccggctcgtgcaggtcggc 323 |||||||||||||||||||| Sbjct: 620967 gccggctcgtgcaggtcggc 620948
>ref|XM_655383.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN2871.2), mRNA Length = 2613 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 gccgctcccgctcccgctcc 112 |||||||||||||||||||| Sbjct: 709 gccgctcccgctcccgctcc 728
>gb|AY742915.1| Mus musculus glycosyltransferase-like 1B splice form 2 (Gyltl1b) mRNA, complete cds, alternatively spliced Length = 2291 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 ctcccgctcccgctccagccccac 120 |||||||| ||||||||||||||| Sbjct: 1935 ctcccgcttccgctccagccccac 1958
>gb|AY742914.1| Mus musculus glycosyltransferase-like 1B splice form 1 (Gyltl1b) mRNA, complete cds, alternatively spliced Length = 2396 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 ctcccgctcccgctccagccccac 120 |||||||| ||||||||||||||| Sbjct: 2040 ctcccgcttccgctccagccccac 2063
>ref|XM_536114.2| PREDICTED: Canis familiaris similar to glutaredoxin 2 isoform 1 (LOC478956), mRNA Length = 621 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 gctcccgctcccgctccagc 115 |||||||||||||||||||| Sbjct: 66 gctcccgctcccgctccagc 47
>gb|AC125291.3| Drosophila melanogaster X BAC CH221-17A11 (CHORI Sheared BAC Drosophila melanogaster library) complete sequence Length = 166613 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ccgctcccgctcccgctcca 113 |||||||||||||||||||| Sbjct: 76652 ccgctcccgctcccgctcca 76633
>ref|XM_488937.4| PREDICTED: Mus musculus hypothetical LOC433408 (LOC433408), mRNA Length = 1295 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 gccgctcccgctcccgctcc 112 |||||||||||||||||||| Sbjct: 39 gccgctcccgctcccgctcc 58
>ref|XM_754472.1| Ustilago maydis 521 hypothetical protein (UM03418.1) partial mRNA Length = 4074 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 cgctcccgctcccgctccag 114 |||||||||||||||||||| Sbjct: 144 cgctcccgctcccgctccag 163
>ref|XM_389406.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG09230.1) partial mRNA Length = 597 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 ctgccgctcccgctcccgct 110 |||||||||||||||||||| Sbjct: 461 ctgccgctcccgctcccgct 480
>ref|XM_567624.1| Cryptococcus neoformans var. neoformans JEC21 endocytosis-related protein (CNK00600) partial mRNA Length = 4870 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 ctgccgctcccgctcccgct 110 |||||||||||||||||||| Sbjct: 1544 ctgccgctcccgctcccgct 1563
>emb|AL591786.1|SME591786 Sinorhizobium meliloti 1021 complete chromosome; segment 5/12 Length = 299350 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 gccggcggcggtgaacggcg 204 |||||||||||||||||||| Sbjct: 3180 gccggcggcggtgaacggcg 3161
>gb|BC058199.1| Mus musculus glycosyltransferase-like 1B, mRNA (cDNA clone IMAGE:5351903), partial cds Length = 2636 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 ctcccgctcccgctccagccccac 120 |||||||| ||||||||||||||| Sbjct: 2245 ctcccgcttccgctccagccccac 2268
>gb|BC033922.1| Mus musculus glycosyltransferase-like 1B, mRNA (cDNA clone IMAGE:5068548), partial cds Length = 1113 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 ctcccgctcccgctccagccccac 120 |||||||| ||||||||||||||| Sbjct: 717 ctcccgcttccgctccagccccac 740
>gb|BC008849.1| Homo sapiens polymerase I and transcript release factor, mRNA (cDNA clone MGC:14316 IMAGE:4140111), complete cds Length = 1748 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 ctcccgctcccgctccagccccac 120 |||||||||| ||||||||||||| Sbjct: 29 ctcccgctccagctccagccccac 52
>emb|AL662864.14| Human DNA sequence from clone RP11-493K23 on chromosome X Contains two novel genes, two novel genes similar to poly(A) binding protein cytoplasmic 1 (LOC340530, LOC340529) and two CpG islands, complete sequence Length = 120769 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 81 accgccccctctgccgctcccgctcccgctcc 112 ||||| |||||| || |||||||||||||||| Sbjct: 76259 accgctccctctccccctcccgctcccgctcc 76290
>ref|XM_502647.1| Yarrowia lipolytica CLIB122, YALI0D10131g predicted mRNA Length = 1716 Score = 40.1 bits (20), Expect = 5.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 342 gtgcccggggacttcaacctcacgctgctcgaccac 377 |||||||| |||||||||||||| ||| | |||||| Sbjct: 88 gtgcccggcgacttcaacctcaccctgttggaccac 123
>gb|AC107993.9| Homo sapiens chromosome 17, clone RP11-194N12, complete sequence Length = 173608 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 97 ctcccgctcccgctccagccccac 120 |||||||||| ||||||||||||| Sbjct: 95553 ctcccgctccagctccagccccac 95530
>emb|X60194.1|RC257 R.capsulatus ORF257 gene for enoyl-CoA hydratase homologue Length = 1002 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 ggcggcggtgaacggcgcgg 207 |||||||||||||||||||| Sbjct: 457 ggcggcggtgaacggcgcgg 476
>ref|NM_001031529.1| Gallus gallus similar to hypothetical protein FLJ11749 (LOC428673), mRNA Length = 2946 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 96 gctcccgctcccgctccagcccca 119 ||||||||||||||||||| |||| Sbjct: 199 gctcccgctcccgctccaggccca 176
>gb|BC061762.1| Rattus norvegicus glycosyltransferase-like 1B, mRNA (cDNA clone MGC:72631 IMAGE:5621056), complete cds Length = 2455 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 ctcccgctcccgctccagccccac 120 |||||||| ||||||||||||||| Sbjct: 2023 ctcccgcttccgctccagccccac 2046
>emb|BX842576.1| Mycobacterium tuberculosis H37Rv complete genome; segment 5/13 Length = 348264 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 181 cgtcgccggcggcggtgaacggcg 204 |||||||||||||||||| ||||| Sbjct: 225580 cgtcgccggcggcggtgaccggcg 225557
>emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genome; segment 15/16 Length = 345012 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 279 gcctcgctggggcgccatctggcg 302 ||||||||||||||| |||||||| Sbjct: 76882 gcctcgctggggcgcaatctggcg 76859
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 gccggctcgtgcaggtcggc 323 |||||||||||||||||||| Sbjct: 1940695 gccggctcgtgcaggtcggc 1940676
>gb|BC066123.1| Homo sapiens polymerase I and transcript release factor, mRNA (cDNA clone MGC:71738 IMAGE:5269172), complete cds Length = 3580 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 ctcccgctcccgctccagccccac 120 |||||||||| ||||||||||||| Sbjct: 106 ctcccgctccagctccagccccac 129
>emb|BX248338.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 5/14 Length = 299450 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 181 cgtcgccggcggcggtgaacggcg 204 |||||||||||||||||| ||||| Sbjct: 290330 cgtcgccggcggcggtgaccggcg 290307
>emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete genome; segment 5/29 Length = 339650 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 gccgtcgccggcggcggtga 198 |||||||||||||||||||| Sbjct: 284477 gccgtcgccggcggcggtga 284496
>emb|AL669988.1|NCB23H20 Neurospora crassa DNA linkage group II BAC contig B23H20 Length = 122151 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 91 ctgccgctcccgctcccgctccagcccc 118 ||||| |||||||||||||||| ||||| Sbjct: 96035 ctgcccctcccgctcccgctcctgcccc 96008
>emb|AL669989.1|NCB8L21 Neurospora crassa DNA linkage group II BAC clone B8L21 Length = 70704 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 91 ctgccgctcccgctcccgctccagcccc 118 ||||| |||||||||||||||| ||||| Sbjct: 47749 ctgcccctcccgctcccgctcctgcccc 47776
>emb|AJ580915.1|SPA580915 Streptomyces parvulus Tu4055 cluster for borrelidin biosynthesis Length = 74787 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 217 cggcgtccgcgccggggtgcccga 240 ||||||||||||||||||| |||| Sbjct: 38619 cggcgtccgcgccggggtggccga 38596
>emb|AJ511783.1|FRU511783 Takifugu rubripes partial junB gene Length = 4050 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 gggaggcctcgctggggcgc 293 |||||||||||||||||||| Sbjct: 1693 gggaggcctcgctggggcgc 1712
>gb|AF533768.1| Cercopithecine herpesvirus 1 strain E2490, complete genome Length = 156789 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 cgacgggccgtcgccggcgg 192 |||||||||||||||||||| Sbjct: 52398 cgacgggccgtcgccggcgg 52379
>ref|NM_199107.1| Rattus norvegicus glycosyltransferase-like 1B (Gyltl1b), mRNA Length = 2455 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 ctcccgctcccgctccagccccac 120 |||||||| ||||||||||||||| Sbjct: 2023 ctcccgcttccgctccagccccac 2046
>emb|AL645850.6| Mouse DNA sequence from clone RP23-13I22 on chromosome 11, complete sequence Length = 58200 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 94 ccgctcccgctcccgctccagccc 117 ||||||||||||||||||| |||| Sbjct: 12705 ccgctcccgctcccgctcccgccc 12728
>emb|AJ719879.1| Gallus gallus mRNA for hypothetical protein, clone 7k13 Length = 2946 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 96 gctcccgctcccgctccagcccca 119 ||||||||||||||||||| |||| Sbjct: 199 gctcccgctcccgctccaggccca 176
>gb|BC037291.2| Homo sapiens glycosyltransferase-like 1B, mRNA (cDNA clone MGC:33333 IMAGE:4821103), complete cds Length = 2530 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 ctcccgctcccgctccagccccac 120 |||||||| ||||||||||||||| Sbjct: 2118 ctcccgcttccgctccagccccac 2141
>gb|AC011495.8| Homo sapiens chromosome 19 clone CTB-33G10, complete sequence Length = 209844 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 ccgctcccgctcccgctcca 113 |||||||||||||||||||| Sbjct: 77927 ccgctcccgctcccgctcca 77946 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 gccgctcccgctcccgctcc 112 |||||||||||||||||||| Sbjct: 77914 gccgctcccgctcccgctcc 77933
>dbj|AK220181.1| Mus musculus mRNA for mKIAA4105 protein Length = 4879 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 ctcccgctcccgctccagccccac 120 |||||||| ||||||||||||||| Sbjct: 4499 ctcccgcttccgctccagccccac 4522
>gb|BC112800.1| Bos taurus cholecystokinin B receptor, mRNA (cDNA clone MGC:137600 IMAGE:8169302), complete cds Length = 2477 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ccgctcccgctcccgctcca 113 |||||||||||||||||||| Sbjct: 1495 ccgctcccgctcccgctcca 1476
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 213 tgcccggcgtccgcgccggggtgc 236 ||||||||||| |||||||||||| Sbjct: 4405534 tgcccggcgtcggcgccggggtgc 4405511
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 ccgctcccgctccagcccca 119 |||||||||||||||||||| Sbjct: 460459 ccgctcccgctccagcccca 460478
>gb|AC023709.4| Drosophila melanogaster X BAC RP98-10I17 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 163710 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ccgctcccgctcccgctcca 113 |||||||||||||||||||| Sbjct: 37956 ccgctcccgctcccgctcca 37937
>emb|CR619128.1| full-length cDNA clone CS0DI067YB06 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 501 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 ctcccgctcccgctccagccccac 120 |||||||| ||||||||||||||| Sbjct: 103 ctcccgcttccgctccagccccac 126
>dbj|AK096021.1| Homo sapiens cDNA FLJ38702 fis, clone KIDNE2002262, moderately similar to Glycosyltransferase Length = 2528 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 ctcccgctcccgctccagccccac 120 |||||||| ||||||||||||||| Sbjct: 2130 ctcccgcttccgctccagccccac 2153
>dbj|AK092526.1| Homo sapiens cDNA FLJ35207 fis, clone PLACE6018863 Length = 2294 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 ctcccgctcccgctccagccccac 120 |||||||| ||||||||||||||| Sbjct: 1896 ctcccgcttccgctccagccccac 1919
>dbj|AK092406.1| Homo sapiens cDNA FLJ35087 fis, clone PLACE6005546, highly similar to Homo sapiens leucine-zipper protein FKSG13 Length = 2085 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 ctcccgctcccgctccagccccac 120 |||||||||| ||||||||||||| Sbjct: 106 ctcccgctccagctccagccccac 129
>dbj|AK074512.1| Homo sapiens cDNA FLJ90031 fis, clone HEMBA1001390, weakly similar to Mus musculus polymerase I-transcript release factor mRNA Length = 1648 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 ctcccgctcccgctccagccccac 120 |||||||||| ||||||||||||| Sbjct: 106 ctcccgctccagctccagccccac 129
>emb|CR597410.1| full-length cDNA clone CS0DI083YB20 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1474 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 ctcccgctcccgctccagccccac 120 |||||||| ||||||||||||||| Sbjct: 1090 ctcccgcttccgctccagccccac 1113
>dbj|AK055829.1| Homo sapiens cDNA FLJ31267 fis, clone KIDNE2006053, moderately similar to Mus musculus mRNA for acetylglucosaminyltransferase-like protein Length = 2459 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 ctcccgctcccgctccagccccac 120 |||||||| ||||||||||||||| Sbjct: 2061 ctcccgcttccgctccagccccac 2084
>gb|AF452637.1| Mus musculus distal-less homeo box 7 (Dlx7) and distal-less homeo box 3 (Dlx3) genes, complete cds Length = 78651 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 94 ccgctcccgctcccgctccagccc 117 ||||||||||||||||||| |||| Sbjct: 47883 ccgctcccgctcccgctcccgccc 47860
>ref|NM_012232.2| Homo sapiens polymerase I and transcript release factor (PTRF), mRNA Length = 3580 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 ctcccgctcccgctccagccccac 120 |||||||||| ||||||||||||| Sbjct: 106 ctcccgctccagctccagccccac 129
>ref|XM_944939.1| PREDICTED: Homo sapiens chromosome 19 open reading frame 29, transcript variant 9 (C19orf29), mRNA Length = 3344 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 ctcccgctcccgctccagcc 116 |||||||||||||||||||| Sbjct: 818 ctcccgctcccgctccagcc 799
>ref|XM_944935.1| PREDICTED: Homo sapiens chromosome 19 open reading frame 29, transcript variant 8 (C19orf29), mRNA Length = 3613 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 ctcccgctcccgctccagcc 116 |||||||||||||||||||| Sbjct: 818 ctcccgctcccgctccagcc 799
>ref|XM_944932.1| PREDICTED: Homo sapiens chromosome 19 open reading frame 29, transcript variant 7 (C19orf29), mRNA Length = 2669 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 ctcccgctcccgctccagcc 116 |||||||||||||||||||| Sbjct: 818 ctcccgctcccgctccagcc 799
>ref|XM_941007.1| PREDICTED: Homo sapiens chromosome 19 open reading frame 29, transcript variant 6 (C19orf29), mRNA Length = 2805 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 ctcccgctcccgctccagcc 116 |||||||||||||||||||| Sbjct: 818 ctcccgctcccgctccagcc 799
>ref|XM_933019.1| PREDICTED: Homo sapiens chromosome 19 open reading frame 29, transcript variant 4 (C19orf29), mRNA Length = 3344 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 ctcccgctcccgctccagcc 116 |||||||||||||||||||| Sbjct: 818 ctcccgctcccgctccagcc 799
>ref|XM_933013.1| PREDICTED: Homo sapiens chromosome 19 open reading frame 29, transcript variant 3 (C19orf29), mRNA Length = 3613 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 ctcccgctcccgctccagcc 116 |||||||||||||||||||| Sbjct: 818 ctcccgctcccgctccagcc 799
>ref|XM_933009.1| PREDICTED: Homo sapiens chromosome 19 open reading frame 29, transcript variant 2 (C19orf29), mRNA Length = 2669 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 ctcccgctcccgctccagcc 116 |||||||||||||||||||| Sbjct: 818 ctcccgctcccgctccagcc 799
>ref|XM_928631.1| PREDICTED: Homo sapiens chromosome 19 open reading frame 29, transcript variant 1 (C19orf29), mRNA Length = 2805 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 ctcccgctcccgctccagcc 116 |||||||||||||||||||| Sbjct: 818 ctcccgctcccgctccagcc 799
>ref|NM_174262.3| Bos taurus cholecystokinin B receptor (CCKBR), mRNA Length = 2477 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ccgctcccgctcccgctcca 113 |||||||||||||||||||| Sbjct: 1495 ccgctcccgctcccgctcca 1476
>gb|AC167287.2| Pan troglodytes chromosome X clone RP43-056J23 map human ortholog p11.4, complete sequence Length = 164383 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 85 ccccctctgccgctcccgctcccgctcc 112 ||||||| ||||||||||||||||||| Sbjct: 148849 ccccctcccccgctcccgctcccgctcc 148876
>dbj|AB096216.1| Paecilomyces tenuipes genes for DNA lyase, MAT1-1-2, MAT1-1-1, complete cds Length = 10239 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ccgctcccgctcccgctcca 113 |||||||||||||||||||| Sbjct: 1446 ccgctcccgctcccgctcca 1427
>gb|AC025296.10| Oryza sativa chromosome 10 BAC OSJNBa0076F20 genomic sequence, complete sequence Length = 165394 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 gccgctcccgctcccgctcc 112 |||||||||||||||||||| Sbjct: 65955 gccgctcccgctcccgctcc 65936
>gb|AC068385.9| Homo sapiens chromosome 11, clone RP11-618K13, complete sequence Length = 171115 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 ctcccgctcccgctccagccccac 120 |||||||| ||||||||||||||| Sbjct: 102642 ctcccgcttccgctccagccccac 102665
>dbj|AK077630.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730485C17 product:hypothetical Nucleotide-diphospho-sugar transferases structure containing protein, full insert sequence Length = 2310 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 ctcccgctcccgctccagccccac 120 |||||||| ||||||||||||||| Sbjct: 1935 ctcccgcttccgctccagccccac 1958
>gb|AF312393.1|AF312393 Homo sapiens leucine-zipper protein FKSG13 (FKSG13) mRNA, complete cds Length = 2362 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 ctcccgctcccgctccagccccac 120 |||||||||| ||||||||||||| Sbjct: 367 ctcccgctccagctccagccccac 390
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 279 gcctcgctggggcgccatctggcg 302 ||||||||||||||| |||||||| Sbjct: 4787492 gcctcgctggggcgcaatctggcg 4787469
>gb|BC096655.1| Mus musculus glycosyltransferase-like 1B, mRNA (cDNA clone MGC:106915 IMAGE:5057489), complete cds Length = 2398 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 ctcccgctcccgctccagccccac 120 |||||||| ||||||||||||||| Sbjct: 1991 ctcccgcttccgctccagccccac 2014
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 gccggctcgtgcaggtcggc 323 |||||||||||||||||||| Sbjct: 574610 gccggctcgtgcaggtcggc 574629
>gb|BC004023.1| Mus musculus glycosyltransferase-like 1B, mRNA (cDNA clone IMAGE:3494411) Length = 1063 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 ctcccgctcccgctccagccccac 120 |||||||| ||||||||||||||| Sbjct: 669 ctcccgcttccgctccagccccac 692
>gb|AC091874.4| Homo sapiens chromosome 5 clone CTD-2593A12, complete sequence Length = 146078 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 82 ccgccccctctgccgctcccgctcccgctcca 113 |||||||||| ||||| | ||||||||||||| Sbjct: 5972 ccgccccctccgccgcgcgcgctcccgctcca 5941
>gb|AE004752.1| Pseudomonas aeruginosa PAO1, section 313 of 529 of the complete genome Length = 12131 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 283 cgctggggcgccatctggcgcgcc 306 ||||||||||||| |||||||||| Sbjct: 2579 cgctggggcgccaactggcgcgcc 2556
>ref|NM_172670.1| Mus musculus glycosyltransferase-like 1B (Gyltl1b), mRNA Length = 2310 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 ctcccgctcccgctccagccccac 120 |||||||| ||||||||||||||| Sbjct: 1935 ctcccgcttccgctccagccccac 1958
>gb|AF254411.1|AF254411 Homo sapiens ser/arg-rich pre-mRNA splicing factor SR-A1 (SR-A1) gene, complete cds Length = 18497 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 ccgctcccgctcccgctcca 113 |||||||||||||||||||| Sbjct: 11852 ccgctcccgctcccgctcca 11871 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 gccgctcccgctcccgctcc 112 |||||||||||||||||||| Sbjct: 11839 gccgctcccgctcccgctcc 11858
>gb|AF187532.1|AF187532 Streptomyces nogalater SnoN (snoN) gene, partial cds; C-7 ketoreductase (snoaF), SnoO (snoO), SnoL (snoL), putative glycosyl transferase (snogE), putative hydroxylase (snoaW), putative glycosyl transferase (snogD), SnoK (snoK), nogalonic acid methyl ester cyclase (snoaL), putative dTDP-glucose-4,6-dehydratase (snogK), putative dTDP-4-dehydrorhamnose reductase (snogC), SnoG (snoG), SnogN (snogN), putative polyketide cyclase (snoaM), putative amino methylase (snogA), and putative dTDP-glucose synthase (snogJ) genes, complete cds; and putative aminotransferase (snogI) gene, partial cds Length = 16065 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 371 cgaccacctcgtcgccgagcccgg 394 ||||||||||| |||||||||||| Sbjct: 3187 cgaccacctcgacgccgagcccgg 3210
>dbj|AB103335.1| Paecilomyces tenuipes genes for DNA lyase, MAT1-2-1, complete cds, MAT1-1-1 pseudogene Length = 9741 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ccgctcccgctcccgctcca 113 |||||||||||||||||||| Sbjct: 1441 ccgctcccgctcccgctcca 1422
>dbj|AP003748.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1136_A05 Length = 120823 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 ggccgtcgccggcggcggtg 197 |||||||||||||||||||| Sbjct: 67973 ggccgtcgccggcggcggtg 67992
>dbj|AK024444.1| Homo sapiens mRNA for FLJ00034 protein, partial cds Length = 4305 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 ccgctcccgctcccgctcca 113 |||||||||||||||||||| Sbjct: 1852 ccgctcccgctcccgctcca 1871 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 gccgctcccgctcccgctcc 112 |||||||||||||||||||| Sbjct: 1839 gccgctcccgctcccgctcc 1858
>dbj|AK120944.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037N02, full insert sequence Length = 2827 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 ggccgtcgccggcggcggtg 197 |||||||||||||||||||| Sbjct: 558 ggccgtcgccggcggcggtg 539 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,637,598 Number of Sequences: 3902068 Number of extensions: 2637598 Number of successful extensions: 69899 Number of sequences better than 10.0: 269 Number of HSP's better than 10.0 without gapping: 281 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 65422 Number of HSP's gapped (non-prelim): 4436 length of query: 398 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 376 effective length of database: 17,147,199,772 effective search space: 6447347114272 effective search space used: 6447347114272 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
