>gb|AE002146.1| Ureaplasma parvum serovar 3 str. ATCC 700970 section 47 of 59 of the
            complete genome
          Length = 11528

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 444  ttaatttttgtaagattaagtt 465
            ||||||||||||||||||||||
Sbjct: 9690 ttaatttttgtaagattaagtt 9711

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 256     gtggttgctttatggatgtggatgttcagc 285
               ||||||||||||||||||  ||||||||||
Sbjct: 8786673 gtggttgctttatggatgctgatgttcagc 8786702

>dbj|AP002817.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0699D11
          Length = 140825

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 256    gtggttgctttatggatgtggatgttcagc 285
              ||||||||||||||||||  ||||||||||
Sbjct: 104130 gtggttgctttatggatgctgatgttcagc 104159

>dbj|AP001366.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0469E09
          Length = 146081

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 256   gtggttgctttatggatgtggatgttcagc 285
             ||||||||||||||||||  ||||||||||
Sbjct: 22701 gtggttgctttatggatgctgatgttcagc 22730

>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome
          Length = 2702173

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 203    cggacgccgccgctccctgatc 224
              ||||||||||||||||||||||
Sbjct: 699048 cggacgccgccgctccctgatc 699069

>emb|AL928581.8| Mouse DNA sequence from clone RP23-318H20 on chromosome 2, complete
             sequence
          Length = 178735

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 84    ccccagcccagcccggcgcgcg 105
             ||||||||||||||||||||||
Sbjct: 74025 ccccagcccagcccggcgcgcg 74046

>gb|AC008309.8| Drosophila melanogaster clone BACR06L13, complete sequence
          Length = 163325

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 262    gctttatggatgtggatgttc 282
              |||||||||||||||||||||
Sbjct: 148571 gctttatggatgtggatgttc 148591

>emb|AL137020.13| Human DNA sequence from clone RP11-146B14 on chromosome 9 Contains part
             of the JMJD2C gene for jumonji domain containing 2C,
             complete sequence
          Length = 182231

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 457   gattaagttttaccttaattt 477
             |||||||||||||||||||||
Sbjct: 48696 gattaagttttaccttaattt 48716

>emb|AL121898.23|HSA430K20 Human DNA sequence from clone RP11-430K20 on chromosome 20 Contains the
             5' end of the PLCB4 gene for phospholipase C beta 4 and a
             CpG island, complete sequence
          Length = 210359

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 84    ccccagcccagcccggcgcgc 104
             |||||||||||||||||||||
Sbjct: 98997 ccccagcccagcccggcgcgc 99017

>emb|AL513412.3|HS403H13 Homo sapiens chromosome 9 BAC RP11-403H13, complete sequence
          Length = 191668

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 457    gattaagttttaccttaattt 477
              |||||||||||||||||||||
Sbjct: 152183 gattaagttttaccttaattt 152203

>gb|AC016132.4|AC016132 Drosophila melanogaster, chromosome 3R, region 93D-93D, BAC clone
             BACR34E13, complete sequence
          Length = 167475

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 262   gctttatggatgtggatgttc 282
             |||||||||||||||||||||
Sbjct: 53885 gctttatggatgtggatgttc 53905

>gb|AE003734.3| Drosophila melanogaster chromosome 3R, section 72 of 118 of the complete
              sequence
          Length = 250533

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 262    gctttatggatgtggatgttc 282
              |||||||||||||||||||||
Sbjct: 189030 gctttatggatgtggatgttc 189050

>gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete genome
          Length = 2201561

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 433     aatttcacttcttaattttt 452
               ||||||||||||||||||||
Sbjct: 1707945 aatttcacttcttaattttt 1707926

>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 92      cagcccggcgcgcgtccgtt 111
               ||||||||||||||||||||
Sbjct: 3607521 cagcccggcgcgcgtccgtt 3607502

>gb|AC130835.3| Mus musculus BAC clone RP24-132F18 from chromosome 19, complete
             sequence
          Length = 170078

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 448   tttttgtaagattaagtttt 467
             ||||||||||||||||||||
Sbjct: 33797 tttttgtaagattaagtttt 33778

>gb|AC140033.3| Medicago truncatula clone mth2-24f11, complete sequence
          Length = 120384

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 432  taatttcacttcttaatttt 451
            ||||||||||||||||||||
Sbjct: 5679 taatttcacttcttaatttt 5698

>gb|AC140544.21| Medicago truncatula clone mth2-17g16, complete sequence
          Length = 118777

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 432   taatttcacttcttaatttt 451
             ||||||||||||||||||||
Sbjct: 51597 taatttcacttcttaatttt 51616

>gb|AC072046.11| Homo sapiens 3 BAC RP11-450H5 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 186117

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 309    gtcttcaggggatatttgtgtgtggaatgcat 340
              |||||||||| | | |||||||||||||||||
Sbjct: 176430 gtcttcagggtagagttgtgtgtggaatgcat 176399

>gb|AC113337.2| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar
             Nipponbare clone OSJNBa0061H20, from chromosome 10,
             complete sequence
          Length = 135876

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 441   ttcttaatttttgtaagatt 460
             ||||||||||||||||||||
Sbjct: 24424 ttcttaatttttgtaagatt 24443

>emb|AL607146.6| Mouse DNA sequence from clone RP23-312G6 on chromosome 11 Contains the 5'
              end of a novel gene, complete sequence
          Length = 191046

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 437    tcacttcttaatttttgtaa 456
              ||||||||||||||||||||
Sbjct: 116225 tcacttcttaatttttgtaa 116206

>gb|AF186190.4| Homo sapiens chromosome 8 clone CTC-369M3 map 8q24.3 , complete
             sequence
          Length = 152405

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 85    cccagcccagcccggcgcgc 104
             ||||||||||||||||||||
Sbjct: 46065 cccagcccagcccggcgcgc 46046

>gb|AF192304.6| Homo sapiens chromosome 8 clone CTC-458A3 map 8q24.3, complete sequence
          Length = 177028

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 85     cccagcccagcccggcgcgc 104
              ||||||||||||||||||||
Sbjct: 135528 cccagcccagcccggcgcgc 135509

>dbj|AB236144.1| Rattus norvegicus PGAP2 mRNA for post-GPI-attachment to proteins
          2, complete cds
          Length = 1234

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 80 ggagccccagcccagcccgg 99
          ||||||||||||||||||||
Sbjct: 30 ggagccccagcccagcccgg 11

>dbj|AK126924.1| Homo sapiens cDNA FLJ44977 fis, clone BRAWH3002513, highly  similar
           to NDRG1 PROTEIN
          Length = 3755

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 85  cccagcccagcccggcgcgc 104
           ||||||||||||||||||||
Sbjct: 182 cccagcccagcccggcgcgc 201

>ref|NM_053895.1| Rattus norvegicus FGF receptor activating protein 1 (Frag1), mRNA
          Length = 1780

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 80  ggagccccagcccagcccgg 99
           ||||||||||||||||||||
Sbjct: 547 ggagccccagcccagcccgg 528

>gb|AC023608.3| Mus musculus chromosome 18 clone CT7-402J1, complete sequence
          Length = 138710

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 437   tcacttcttaatttttgtaa 456
             ||||||||||||||||||||
Sbjct: 33013 tcacttcttaatttttgtaa 33032

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 441     ttcttaatttttgtaagatt 460
               ||||||||||||||||||||
Sbjct: 4598380 ttcttaatttttgtaagatt 4598399

>gb|AC134829.3| Mus musculus BAC clone RP24-491N21 from 6, complete sequence
          Length = 173494

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 368    ttaaattaattatatattgc 387
              ||||||||||||||||||||
Sbjct: 130488 ttaaattaattatatattgc 130507

>emb|BX510919.4| Zebrafish DNA sequence from clone DKEY-164K19 in linkage group 20,
              complete sequence
          Length = 243899

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 261    tgctttatggatgtggatgt 280
              ||||||||||||||||||||
Sbjct: 179027 tgctttatggatgtggatgt 179008

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 441     ttcttaatttttgtaagatt 460
               ||||||||||||||||||||
Sbjct: 4599201 ttcttaatttttgtaagatt 4599220

>gb|AC161464.3| Gallus gallus BAC clone CH261-163N1 from chromosome ul, complete
             sequence
          Length = 149167

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 318   ggatatttgtgtgtggaatg 337
             ||||||||||||||||||||
Sbjct: 98594 ggatatttgtgtgtggaatg 98575

>gb|U57715.1|RNU57715 Rattus norvegicus FGF receptor activating protein FRAG1 (FRAG1)
           mRNA, complete cds
          Length = 1780

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 80  ggagccccagcccagcccgg 99
           ||||||||||||||||||||
Sbjct: 547 ggagccccagcccagcccgg 528

>emb|AL732403.9| Mouse DNA sequence from clone RP23-119L20 on chromosome 2, complete
              sequence
          Length = 211892

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 306    aatgtcttcaggggatattt 325
              ||||||||||||||||||||
Sbjct: 203534 aatgtcttcaggggatattt 203515


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,921,965
Number of Sequences: 3902068
Number of extensions: 4921965
Number of successful extensions: 94911
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94682
Number of HSP's gapped (non-prelim): 229
length of query: 512
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 489
effective length of database: 17,143,297,704
effective search space: 8383072577256
effective search space used: 8383072577256
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)