Clone Name | bastl03c01 |
---|---|
Clone Library Name | barley_pub |
>CMTA2_ARATH (Q6NPP4) Calmodulin-binding transcription activator 2| (Signal-responsive protein 4) (Ethylene-induced calmodulin-binding protein c) (EICBP.c) (AtER66) Length = 1050 Score = 97.8 bits (242), Expect = 1e-20 Identities = 42/68 (61%), Positives = 55/68 (80%) Frame = +1 Query: 232 DINVLLGEAKSRWLKPSEVYYILLNHEQLQITHEPPNKPPSGSLFLYNRRVNRFFRKDGY 411 DI LL EA+ RWL+P+E+ IL NH++ I EPPN+PPSGSLFL++R+V R+FRKDG+ Sbjct: 14 DIKQLLSEAQHRWLRPAEICEILRNHQKFHIASEPPNRPPSGSLFLFDRKVLRYFRKDGH 73 Query: 412 AWRRKKDG 435 WR+KKDG Sbjct: 74 NWRKKKDG 81
>CMTA4_ARATH (Q9FYG2) Calmodulin-binding transcription activator 4| (Signal-responsive protein 5) (Ethylene-induced calmodulin-binding protein d) (EICBP.d) (Ethylene-induced calmodulin-binding protein 4) (EICBP4) (AtFIN21) Length = 1016 Score = 93.2 bits (230), Expect = 2e-19 Identities = 41/69 (59%), Positives = 53/69 (76%) Frame = +1 Query: 229 FDINVLLGEAKSRWLKPSEVYYILLNHEQLQITHEPPNKPPSGSLFLYNRRVNRFFRKDG 408 ++I+ L EA SRWLKP EV +IL NHE L +T+ P +P SGSL L+N+RV +FFRKDG Sbjct: 36 YEISTLYQEAHSRWLKPPEVLFILQNHESLTLTNTAPQRPTSGSLLLFNKRVLKFFRKDG 95 Query: 409 YAWRRKKDG 435 + WRRK+DG Sbjct: 96 HQWRRKRDG 104
>CMTA3_ARATH (Q8GSA7) Calmodulin-binding transcription activator 3| (Signal-responsive protein 1) (Ethylene-induced calmodulin-binding protein a) (EICBP.a) (Ethylene-induced calmodulin-binding protein 1) (EICBP1) Length = 1032 Score = 87.4 bits (215), Expect = 1e-17 Identities = 36/68 (52%), Positives = 53/68 (77%) Frame = +1 Query: 232 DINVLLGEAKSRWLKPSEVYYILLNHEQLQITHEPPNKPPSGSLFLYNRRVNRFFRKDGY 411 D+ +L EA+ RWL+P E+ IL N+++ QI+ EPP P SGS+F+++R+V R+FRKDG+ Sbjct: 14 DVGQILSEARHRWLRPPEICEILQNYQRFQISTEPPTTPSSGSVFMFDRKVLRYFRKDGH 73 Query: 412 AWRRKKDG 435 WR+KKDG Sbjct: 74 NWRKKKDG 81
>CMTA1_ARATH (Q9FY74) Calmodulin-binding transcription activator 1| (Signal-responsive protein 2) (Ethylene-induced calmodulin-binding protein b) (EICBP.b) Length = 1007 Score = 86.3 bits (212), Expect = 3e-17 Identities = 38/75 (50%), Positives = 53/75 (70%) Frame = +1 Query: 211 VTMSQSFDINVLLGEAKSRWLKPSEVYYILLNHEQLQITHEPPNKPPSGSLFLYNRRVNR 390 +T D+ LL EA+ RWL+P+E+ IL N+ + I E P +P SGSLFL++R+V R Sbjct: 10 ITPPLQLDMEQLLSEAQHRWLRPTEICEILQNYHKFHIASESPTRPASGSLFLFDRKVLR 69 Query: 391 FFRKDGYAWRRKKDG 435 +FRKDG+ WR+KKDG Sbjct: 70 YFRKDGHNWRKKKDG 84
>CMTA5_ARATH (O23463) Calmodulin-binding transcription activator 5| (Signal-responsive protein 6) (Ethylene-induced calmodulin-binding protein f) (EICBP.f) Length = 923 Score = 79.3 bits (194), Expect = 4e-15 Identities = 34/71 (47%), Positives = 51/71 (71%) Frame = +1 Query: 223 QSFDINVLLGEAKSRWLKPSEVYYILLNHEQLQITHEPPNKPPSGSLFLYNRRVNRFFRK 402 Q DI +L EA SRWL+P+E++ +L NH+ I +P N P SG++ L++R++ R FRK Sbjct: 21 QDLDIQTMLDEAYSRWLRPNEIHALLCNHKFFTINVKPVNLPKSGTIVLFDRKMLRNFRK 80 Query: 403 DGYAWRRKKDG 435 DG+ W++KKDG Sbjct: 81 DGHNWKKKKDG 91
>CMTA6_ARATH (Q9LSP8) Calmodulin-binding transcription activator 6| (Signal-responsive protein 3) (Ethylene-induced calmodulin-binding protein e) (EICBP.e) (Ethylene-induced calmodulin-binding protein 5) (EICBP5) Length = 838 Score = 58.5 bits (140), Expect = 7e-09 Identities = 28/71 (39%), Positives = 42/71 (59%) Frame = +1 Query: 223 QSFDINVLLGEAKSRWLKPSEVYYILLNHEQLQITHEPPNKPPSGSLFLYNRRVNRFFRK 402 Q D+ +L EAKSRWL+P+E++ IL G + L++R++ R FRK Sbjct: 21 QDLDVQTMLEEAKSRWLRPNEIHAILC-----------------GRIILFDRKMLRNFRK 63 Query: 403 DGYAWRRKKDG 435 DG+ W++KKDG Sbjct: 64 DGHNWKKKKDG 74
>CMTA1_HUMAN (Q9Y6Y1) Calmodulin-binding transcription activator 1| Length = 1673 Score = 50.8 bits (120), Expect = 1e-06 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 2/65 (3%) Frame = +1 Query: 247 LGEAKSRWLKPSEVYYILLNHEQLQ--ITHEPPNKPPSGSLFLYNRRVNRFFRKDGYAWR 420 L + + RW E+ L+ E+ + +T P +P +GS+ LYNR+ ++ RKDGY W+ Sbjct: 67 LPKERHRWNTNEEIAAYLITFEKHEEWLTTSPKTRPQNGSMILYNRKKVKY-RKDGYCWK 125 Query: 421 RKKDG 435 ++KDG Sbjct: 126 KRKDG 130
>CMTA2_HUMAN (O94983) Calmodulin-binding transcription activator 2| Length = 1202 Score = 47.8 bits (112), Expect = 1e-05 Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 2/66 (3%) Frame = +1 Query: 244 LLGEAKSRWLKPSEVYYILLNHEQLQ--ITHEPPNKPPSGSLFLYNRRVNRFFRKDGYAW 417 LL + RW E+ L+ E+ ++ P +P +GS+ LYNR+ ++ RKDGY W Sbjct: 33 LLPPERLRWNTNEEIASYLITFEKHDEWLSCAPKTRPQNGSIILYNRKKVKY-RKDGYLW 91 Query: 418 RRKKDG 435 +++KDG Sbjct: 92 KKRKDG 97
>CMTA2_MOUSE (Q80Y50) Calmodulin-binding transcription activator 2| Length = 1208 Score = 47.8 bits (112), Expect = 1e-05 Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 2/66 (3%) Frame = +1 Query: 244 LLGEAKSRWLKPSEVYYILLNHEQLQ--ITHEPPNKPPSGSLFLYNRRVNRFFRKDGYAW 417 LL + RW E+ L+ E+ ++ P +P +GS+ LYNR+ ++ RKDGY W Sbjct: 33 LLPPERLRWNTNEEIASYLITFEKHDEWLSCAPKTRPQNGSIILYNRKKVKY-RKDGYLW 91 Query: 418 RRKKDG 435 +++KDG Sbjct: 92 KKRKDG 97
>SYN_XYLFT (Q87A82) Asparaginyl-tRNA synthetase (EC 6.1.1.22)| (Asparagine--tRNA ligase) (AsnRS) Length = 466 Score = 32.7 bits (73), Expect = 0.39 Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 8/83 (9%) Frame = +1 Query: 193 GAGSPQVTMSQSFDINVLLGEAKSRWLKPSEVYYILLNHEQLQITHEPPNKPPSGSLF-- 366 G +P + Q F+I E W++ E Y I L+ E + P +LF Sbjct: 78 GTLAPSLGQGQQFEIQAQSIEVVG-WVEDPETYPIQPKQHSLEFLREVAHLRPRTNLFGA 136 Query: 367 ------LYNRRVNRFFRKDGYAW 417 ++ V+RFF ++GY W Sbjct: 137 VARIRHCLSQAVHRFFHENGYYW 159
>SYN_XYLFA (Q9PAF5) Asparaginyl-tRNA synthetase (EC 6.1.1.22)| (Asparagine--tRNA ligase) (AsnRS) Length = 466 Score = 32.7 bits (73), Expect = 0.39 Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 8/83 (9%) Frame = +1 Query: 193 GAGSPQVTMSQSFDINVLLGEAKSRWLKPSEVYYILLNHEQLQITHEPPNKPPSGSLF-- 366 G +P + Q F+I E W++ E Y I L+ E + P +LF Sbjct: 78 GTLAPSLGQGQQFEIQAQSIEVVG-WVEDPETYPIQPKQHSLEFLREVAHLRPRTNLFGA 136 Query: 367 ------LYNRRVNRFFRKDGYAW 417 ++ V+RFF ++GY W Sbjct: 137 VARIRHCLSQAVHRFFHENGYYW 159
>YHP7_YEAST (P38809) Protein YHR097C| Length = 366 Score = 30.8 bits (68), Expect = 1.5 Identities = 15/41 (36%), Positives = 23/41 (56%) Frame = -3 Query: 232 QNSGSWSLAEIRHRQPRSSHGRRGLDKSSTKWKPRLQTNKN 110 ++SGS S H R+SHG R DK +K + +++ KN Sbjct: 89 RSSGSNSHQHNHHHHRRTSHGHRDKDKQKSKSRTKVKPPKN 129
>ISCS_AZOVI (O31269) Cysteine desulfurase (EC 2.8.1.7) (NifS protein homolog)| Length = 403 Score = 30.8 bits (68), Expect = 1.5 Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Frame = -1 Query: 291 VDFRRL*PPALCFS-EKHVDVKTLAHGHLRRSGTGSLEALMEGGGSTRAPRSGSPASKQ 118 +D R+ + FS K K + ++RR LEA M GGG R RSG+ A+ Q Sbjct: 189 IDLERMKVDLMSFSAHKTYGPKGIGALYVRRKPRVRLEAQMHGGGHERGMRSGTLATHQ 247
>RSP4_CHLRE (Q01656) Flagellar radial spoke protein 4| Length = 465 Score = 30.4 bits (67), Expect = 1.9 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = -2 Query: 200 PAPAASKLSWKEGARQELHEVEAPPPNKQE 111 P P A + +W E QEL APPP ++E Sbjct: 431 PPPVAQEFAWGEVETQELELKPAPPPPEEE 460
>NFS1_ARATH (O49543) Cysteine desulfurase, mitochondrial precursor (EC 2.8.1.7)| Length = 453 Score = 29.6 bits (65), Expect = 3.3 Identities = 15/32 (46%), Positives = 20/32 (62%) Frame = -1 Query: 213 HLRRSGTGSLEALMEGGGSTRAPRSGSPASKQ 118 ++RR LE LM GGG R RSG+ A++Q Sbjct: 265 YVRRRPRIRLEPLMNGGGQERGLRSGTGATQQ 296
>SCG1_MOUSE (P16014) Secretogranin-1 precursor (Secretogranin I) (SgI)| (Chromogranin B) (CgB) Length = 677 Score = 29.6 bits (65), Expect = 3.3 Identities = 13/28 (46%), Positives = 18/28 (64%) Frame = -3 Query: 214 SLAEIRHRQPRSSHGRRGLDKSSTKWKP 131 S +E+ R+PR HGR G +KSS + P Sbjct: 279 SASEVTKRRPRHHHGRSGSNKSSYEGHP 306
>ADHX_SPAAU (P79896) Alcohol dehydrogenase class 3 (EC 1.1.1.1) (Alcohol| dehydrogenase class III) (S-(hydroxymethyl)glutathione dehydrogenase) (EC 1.1.1.284) (Glutathione-dependent formaldehyde dehydrogenase) (FDH) (FALDH) Length = 376 Score = 29.3 bits (64), Expect = 4.3 Identities = 12/38 (31%), Positives = 19/38 (50%) Frame = -2 Query: 218 MVTCGDPAPAASKLSWKEGARQELHEVEAPPPNKQELK 105 M T G + ++W+ G + EVE PPN E++ Sbjct: 1 METAGKVIKCKAAVAWEPGKPLSIEEVEVAPPNAHEVR 38
>CCM2_BRARE (Q6DRP4) Malcavernin (Cerebral cavernous malformations protein 2| homolog) Length = 455 Score = 29.3 bits (64), Expect = 4.3 Identities = 18/60 (30%), Positives = 30/60 (50%) Frame = -1 Query: 252 SEKHVDVKTLAHGHLRRSGTGSLEALMEGGGSTRAPRSGSPASKQTRTETVSRQGSEGAD 73 S VDVK + + T S ++ +E G S+ + +PAS QT+T + S + A+ Sbjct: 250 SSSKVDVKDVFEAE---ASTFSFQSSLEAGHSSSPSPTSAPASPQTKTASESELSTTAAE 306
>VIT2_PERAM (Q9BPS0) Vitellogenin 2 precursor (Vg-2)| Length = 1876 Score = 29.3 bits (64), Expect = 4.3 Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 3/89 (3%) Frame = -1 Query: 324 DLELLMIQQDIV---DFRRL*PPALCFSEKHVDVKTLAHGHLRRSGTGSLEALMEGGGST 154 D+E L++ +V D RL +C E V H H +SG + + S+ Sbjct: 1685 DVEDLILAYTLVRDLDRSRLRDENICVREDVQLVNLTNHRHAEKSGIRPYDIDDDSSSSS 1744 Query: 153 RAPRSGSPASKQTRTETVSRQGSEGADAA 67 + S S +S +++ + S SE ++A Sbjct: 1745 SSSSSSSSSSSSSKSNSTSSSSSESNESA 1773
>ADH6_PONPY (Q5R7Z8) Alcohol dehydrogenase 6 (EC 1.1.1.1)| Length = 375 Score = 29.3 bits (64), Expect = 4.3 Identities = 13/38 (34%), Positives = 19/38 (50%) Frame = -2 Query: 218 MVTCGDPAPAASKLSWKEGARQELHEVEAPPPNKQELK 105 M T G + + WK GA + EVE PP +E++ Sbjct: 1 MSTTGQVIRCKAAILWKPGAPFSIEEVEVAPPKAKEVR 38
>ADH6_HUMAN (P28332) Alcohol dehydrogenase 6 (EC 1.1.1.1)| Length = 368 Score = 29.3 bits (64), Expect = 4.3 Identities = 13/38 (34%), Positives = 19/38 (50%) Frame = -2 Query: 218 MVTCGDPAPAASKLSWKEGARQELHEVEAPPPNKQELK 105 M T G + + WK GA + EVE PP +E++ Sbjct: 1 MSTTGQVIRCKAAILWKPGAPFSIEEVEVAPPKAKEVR 38
>RW1_MOUSE (O70472) RW1 protein| Length = 1829 Score = 28.9 bits (63), Expect = 5.7 Identities = 14/33 (42%), Positives = 20/33 (60%) Frame = -2 Query: 185 SKLSWKEGARQELHEVEAPPPNKQELKQ*AGKG 87 S +S +G + L + +A PP KQE K+ GKG Sbjct: 1323 SPMSKSKGKGKSLQQRKAKPPKKQEEKEKRGKG 1355
>P2Y13_RAT (Q6GUG4) P2Y purinoceptor 13 (P2Y13)| Length = 336 Score = 28.5 bits (62), Expect = 7.4 Identities = 14/48 (29%), Positives = 20/48 (41%) Frame = +3 Query: 51 FKSKHKQHQRLHSLACLLFQFLFVWRRGFHFVXXXXXXXXXXXXRGCR 194 FKS+ +H+RL + ++ FV FHFV CR Sbjct: 224 FKSRDSKHKRLEAKVFIVMAVFFVCFAPFHFVRVPYTHSQTTNKTDCR 271
>PROA_SYMTH (Q67LC2) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)| (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase) Length = 425 Score = 28.1 bits (61), Expect = 9.7 Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 2/62 (3%) Frame = -1 Query: 261 LCFSEKHVDVKTLAHGHLRRSGTGSLEALMEG--GGSTRAPRSGSPASKQTRTETVSRQG 88 LC + K V A H+ R GTG EA++ G G + R RS A+ T G Sbjct: 325 LCLAVKVVSGLDEALAHIARYGTGHSEAIVTGDAGAADRFLRSVDAAAVYHNASTRFTDG 384 Query: 87 SE 82 E Sbjct: 385 GE 386
>LASS1_HUMAN (P27544) LAG1 longevity assurance homolog 1 (UOG-1 protein) (LAG1| protein) Length = 350 Score = 28.1 bits (61), Expect = 9.7 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 4/35 (11%) Frame = +3 Query: 51 FKSKHKQHQRLHSLA----CLLFQFLFVWRRGFHF 143 FKS+ + RLH+LA CL F F + W R + F Sbjct: 225 FKSRGGSYHRLHALAADLGCLSFGFSWFWFRLYWF 259
>GLPK_PASMU (P57944) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol| 3-phosphotransferase) (Glycerokinase) (GK) Length = 502 Score = 28.1 bits (61), Expect = 9.7 Identities = 11/32 (34%), Positives = 16/32 (50%) Frame = +1 Query: 94 PAYCFSSCLFGGGASTSWSSCRAPSFHESFEA 189 PAY +F GGAS W H+S+++ Sbjct: 299 PAYALEGSIFMGGASIQWLRDELKIVHDSYDS 330
>NFS1_SCHPO (O74351) Probable cysteine desulfurase, mitochondrial precursor (EC| 2.8.1.7) Length = 498 Score = 28.1 bits (61), Expect = 9.7 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = -1 Query: 231 KTLAHGHLRRSGTGSLEALMEGGGSTRAPRSGSPASKQ 118 K + ++RR LE L+ GGG R RSG+ A Q Sbjct: 305 KGIGAAYVRRRPRVRLEPLISGGGQERGLRSGTLAPSQ 342
>SCG1_BOVIN (P23389) Secretogranin-1 precursor (Secretogranin I) (SgI)| (Chromogranin B) (CgB) [Contains: GAWK peptide; Peptide BAM-1745; Secretolytin] Length = 646 Score = 28.1 bits (61), Expect = 9.7 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = -3 Query: 199 RHRQPRSSHGRRGLDKSSTKWKPRLQ 122 RH +PR HGR D+SS + P L+ Sbjct: 260 RHSRPRHHHGRSRPDRSSQEGNPPLE 285 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 68,214,687 Number of Sequences: 219361 Number of extensions: 1421662 Number of successful extensions: 4739 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 4472 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4721 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2511994855 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)