Clone Name | bastl03b08 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | ATBF1_MOUSE (Q61329) Alpha-fetoprotein enhancer-binding protein ... | 28 | 7.6 | 2 | VGP_EBOIC (Q66810) Structural glycoprotein precursor (Virion spi... | 27 | 9.9 |
---|
>ATBF1_MOUSE (Q61329) Alpha-fetoprotein enhancer-binding protein (AT motif-binding| factor) (AT-binding transcription factor 1) Length = 3726 Score = 27.7 bits (60), Expect = 7.6 Identities = 11/28 (39%), Positives = 15/28 (53%) Frame = +1 Query: 1 PFPSSPRERFSKTLPRRSTPFLPIPPTQ 84 P SP+ K +PR +P LP PP + Sbjct: 3439 PAKESPKPEEQKNVPRELSPLLPKPPEE 3466
>VGP_EBOIC (Q66810) Structural glycoprotein precursor (Virion spike| glycoprotein) [Contains: GP1; GP2] Length = 676 Score = 27.3 bits (59), Expect = 9.9 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = +1 Query: 19 RERFSKTLPRRSTPFLPIPPTQN 87 ++ F+KTL F+P+P TQN Sbjct: 294 KKNFTKTLSSEELSFVPVPETQN 316 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.137 0.423 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 21,070,594 Number of Sequences: 219361 Number of extensions: 194430 Number of successful extensions: 661 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 653 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 661 length of database: 80,573,946 effective HSP length: 81 effective length of database: 62,805,705 effective search space used: 1507336920 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)