>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 57/63 (90%)
 Strand = Plus / Minus

                                                                           
Query: 113     aatggaggtgccgccggagatgctcgacaccctggcgggctggttcgcgcagaccctctc 172
               |||||||||| ||||||||| ||||||||||||| |||| |||||||||||| | |||||
Sbjct: 7481689 aatggaggtggcgccggagacgctcgacaccctgtcggggtggttcgcgcagtcgctctc 7481630

                  
Query: 173     ccc 175
               |||
Sbjct: 7481629 ccc 7481627

>dbj|AP001539.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0708G02
          Length = 168976

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 57/63 (90%)
 Strand = Plus / Minus

                                                                         
Query: 113   aatggaggtgccgccggagatgctcgacaccctggcgggctggttcgcgcagaccctctc 172
             |||||||||| ||||||||| ||||||||||||| |||| |||||||||||| | |||||
Sbjct: 30481 aatggaggtggcgccggagacgctcgacaccctgtcggggtggttcgcgcagtcgctctc 30422

                
Query: 173   ccc 175
             |||
Sbjct: 30421 ccc 30419

>dbj|AK064696.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-F11, full
           insert sequence
          Length = 1754

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 57/63 (90%)
 Strand = Plus / Plus

                                                                       
Query: 113 aatggaggtgccgccggagatgctcgacaccctggcgggctggttcgcgcagaccctctc 172
           |||||||||| ||||||||| ||||||||||||| |||| |||||||||||| | |||||
Sbjct: 126 aatggaggtggcgccggagacgctcgacaccctgtcggggtggttcgcgcagtcgctctc 185

              
Query: 173 ccc 175
           |||
Sbjct: 186 ccc 188

>ref|NM_188661.1| Oryza sativa (japonica cultivar-group), Ozsa8264 predicted mRNA
          Length = 2952

 Score = 75.8 bits (38), Expect = 8e-11
 Identities = 56/62 (90%)
 Strand = Plus / Plus

                                                                       
Query: 114 atggaggtgccgccggagatgctcgacaccctggcgggctggttcgcgcagaccctctcc 173
           ||||||||| ||||||||| ||||||||||||| |||| |||||||||||| | ||||||
Sbjct: 1   atggaggtggcgccggagacgctcgacaccctgtcggggtggttcgcgcagtcgctctcc 60

             
Query: 174 cc 175
           ||
Sbjct: 61  cc 62

>gb|BT017810.1| Zea mays clone EL01N0507A04.c mRNA sequence
          Length = 1011

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 116 ggaggtgccgccggagatgc 135
           ||||||||||||||||||||
Sbjct: 239 ggaggtgccgccggagatgc 258

>gb|AY725781.1| Oncometopia nigricans putative rhodopsin mRNA, complete cds
          Length = 1146

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 118 aggtgccgccggagatgctc 137
           ||||||||||||||||||||
Sbjct: 83  aggtgccgccggagatgctc 102

>gb|DQ442996.1| Triticum aestivum phosphomannomutase mRNA, complete cds
          Length = 750

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 116 ggaggtgccgccggagatgctcga 139
           ||||||| ||||||||||||||||
Sbjct: 75  ggaggtgacgccggagatgctcga 98

>gb|AC124591.4| Mus musculus BAC clone RP23-136G17 from chromosome 8, complete sequence
          Length = 201039

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     cccttcccctcttctccacg 20
             ||||||||||||||||||||
Sbjct: 98543 cccttcccctcttctccacg 98562

>gb|BC093401.1| Rattus norvegicus cathepsin W, mRNA (cDNA clone MGC:112764
           IMAGE:7389584), complete cds
          Length = 1272

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 42  acctcgccgctccaccccct 61
           ||||||||||||||||||||
Sbjct: 947 acctcgccgctccaccccct 966

>gb|AC162945.5| Mus musculus BAC clone RP23-60O19 from chromosome 8, complete sequence
          Length = 221852

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 1      cccttcccctcttctccacg 20
              ||||||||||||||||||||
Sbjct: 196548 cccttcccctcttctccacg 196567

>ref|NM_001024242.1| Rattus norvegicus cathepsin W (Ctsw), mRNA
          Length = 1272

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 42  acctcgccgctccaccccct 61
           ||||||||||||||||||||
Sbjct: 947 acctcgccgctccaccccct 966

>gb|AC114897.43| Mus musculus strain C57BL/6J clone rp23-158e11 map 8, complete sequence
          Length = 202175

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     cccttcccctcttctccacg 20
             ||||||||||||||||||||
Sbjct: 98783 cccttcccctcttctccacg 98802


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,435,004
Number of Sequences: 3902068
Number of extensions: 1435004
Number of successful extensions: 25972
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 25944
Number of HSP's gapped (non-prelim): 28
length of query: 318
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 296
effective length of database: 17,147,199,772
effective search space: 5075571132512
effective search space used: 5075571132512
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)