ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl03b02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK121271.1| Oryza sativa (japonica cultivar-group) cDNA clon... 149 1e-32
2dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 145 2e-31
3emb|AL662958.3|OSJN00156 Oryza sativa genomic DNA, chromosome 4,... 145 2e-31
4emb|AL731629.2|OSJN00274 Oryza sativa genomic DNA, chromosome 4,... 145 2e-31
5ref|XM_473207.1| Oryza sativa (japonica cultivar-group), predic... 143 6e-31
6gb|AC151485.5| Monodelphis domestica, clone XX-214B11, complete ... 44 0.43
7ref|XM_364860.1| Magnaporthe grisea 70-15 hypothetical protein (... 42 1.7
8emb|BX927144.24| Zebrafish DNA sequence from clone CH211-216K22 ... 42 1.7
9emb|BX530098.6| Zebrafish DNA sequence from clone RP71-1G9, comp... 42 1.7
10emb|BX784023.10| Zebrafish DNA sequence from clone DKEY-163F12 i... 42 1.7
11gb|AC012377.5|AC012377 Homo sapiens chromosome 15 clone RP11-325... 42 1.7
12gb|AC023908.6|AC023908 Homo sapiens chromosome 15 clone RP11-37C... 42 1.7
13ref|XM_364064.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 6.6
14ref|XM_419772.1| PREDICTED: Gallus gallus similar to ST3A1 (LOC4... 40 6.6
15gb|AC137592.2| Oryza sativa (Japonica cultiva-group) chromosome ... 40 6.6
16gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, c... 40 6.6
17gb|AC136965.2| Canis familiaris clone RP81-213K20, complete sequ... 40 6.6
18gb|AC124364.4| Mus musculus BAC clone RP24-538E16 from chromosom... 40 6.6
19gb|AC095281.6| Rattus norvegicus 4 BAC CH230-10M16 (Children's H... 40 6.6
20gb|AC093043.6| Mus Musculus Strain C57BL6/J Chromosome 14 BAC, R... 40 6.6
21emb|BX842650.1| Bdellovibrio bacteriovorus complete genome, stra... 40 6.6
22emb|AL589722.17| Mouse DNA sequence from clone RP23-169M24 on ch... 40 6.6
23emb|CR318611.4| Zebrafish DNA sequence from clone DKEY-199F5 in ... 40 6.6
24emb|BX248113.22| Zebrafish DNA sequence from clone CH211-132F21,... 40 6.6
25gb|AC093022.4| Mus Musculus Chromosome 14 Strain C57Bl6/J Clone ... 40 6.6
26ref|XM_695675.1| PREDICTED: Danio rerio similar to immunoglobuli... 40 6.6
27gb|AC157591.2| Mus musculus BAC clone RP23-311C13 from chromosom... 40 6.6
28emb|BX682531.11| Zebrafish DNA sequence from clone CH211-12C17 i... 40 6.6
29dbj|AK080448.1| Mus musculus 7 days neonate cerebellum cDNA, RIK... 40 6.6
30dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
31gb|AC098828.3| Homo sapiens BAC clone RP11-644K8 from 2, complet... 40 6.6
32gb|AC009034.10| Homo sapiens chromosome 16 clone RP11-141O15, co... 40 6.6
33emb|BX934942.1| Gallus gallus finished cDNA, clone ChEST151l24 40 6.6
34emb|BX323052.5| Zebrafish DNA sequence from clone CH211-234A12 i... 40 6.6
35gb|AC090957.1| Homo sapiens chromosome 3 clone RP11-708D1 map 3p... 40 6.6
36emb|BX248122.10| Zebrafish DNA sequence from clone CH211-214C20 ... 40 6.6
37emb|BX511214.8| Zebrafish DNA sequence from clone DKEY-191C11, c... 40 6.6
38emb|BX001033.6| Zebrafish DNA sequence from clone CH211-286F4 in... 40 6.6
39dbj|AK069699.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.6
40emb|BX649578.14| Zebrafish DNA sequence from clone CH211-196L7 i... 40 6.6
41emb|AL714005.17| Zebrafish DNA sequence from clone BUSM1-13F19 i... 40 6.6
42emb|AL928944.8| Zebrafish DNA sequence from clone DKEYP-2H4 in l... 40 6.6
43tpe|BN000728.1| TPA: TPA_exp: Canis familiaris col6a3 gene for c... 40 6.6
44emb|CR450837.12| Zebrafish DNA sequence from clone CH211-51L13 i... 40 6.6
45emb|CT010507.11| Mouse DNA sequence from clone RP23-259G10 on ch... 40 6.6
46gb|AC137708.16| Mus musculus chromosome 3, clone RP24-277H8, com... 40 6.6
47emb|AL079307.7|CNS00M8N Human chromosome 14 DNA sequence BAC R-2... 40 6.6
48emb|AJ920047.1| Canis familiaris melanophilin gene locus, breed ... 40 6.6
49emb|AL954724.9| Zebrafish DNA sequence from clone CH211-265P12, ... 40 6.6
50emb|AL845430.12| Mouse DNA sequence from clone RP23-402L5 on chr... 40 6.6
51gb|AC140321.3| Mus musculus BAC clone RP23-402K6 from 1, complet... 40 6.6
52gb|AC159824.2| Mus musculus BAC clone RP23-122E19 from chromosom... 40 6.6
53emb|AL669961.8| Mouse DNA sequence from clone RP23-43M17 on chro... 40 6.6 
>dbj|AK121271.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023106H08, full
           insert sequence
          Length = 4625

 Score =  149 bits (75), Expect = 1e-32
 Identities = 128/146 (87%)
 Strand = Plus / Plus

                                                                       
Query: 325 ttgctggggttgtttatacttttccttcatggatcctggtctgtttaccgtatgcagttt 384
           |||||||| ||||| ||  | |||||||||||||||||||||||||| ||| | ||||||
Sbjct: 315 ttgctgggattgttgatggtcttccttcatggatcctggtctgtttatcgttttcagttt 374

                                                                       
Query: 385 gcaaatcttcctttgccccttaatgctgagcaggctggtaagcggnggttctcagaggct 444
           ||||||||||||||||||||| ||||||| |||||||| |||||  ||||||||||||| 
Sbjct: 375 gcaaatcttcctttgccccttgatgctgaacaggctggcaagcgtgggttctcagaggca 434

                                     
Query: 445 tctgcccttaagcatgtgaagtactt 470
           ||||| ||  ||||||| ||||||||
Sbjct: 435 tctgctctggagcatgttaagtactt 460



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                       
Query: 208 acatacagaatgcctcgagggcgaggttcgtctgtgtcaacccaagagaagcctaatgct 267
           |||| ||||||||||||||||||||| || |||||  ||||||| ||||| || || | |
Sbjct: 198 acatgcagaatgcctcgagggcgaggctcttctgtcacaacccatgagaaacccaaagtt 257

                       
Query: 268 gatgcagcagtc 279
           |||| |||||||
Sbjct: 258 gatgaagcagtc 269
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  145 bits (73), Expect = 2e-31
 Identities = 126/144 (87%)
 Strand = Plus / Minus

                                                                            
Query: 325      ttgctggggttgtttatacttttccttcatggatcctggtctgtttaccgtatgcagttt 384
                |||||||| ||||| ||  | |||||||||||||||||||||||||| ||| | ||||||
Sbjct: 26007107 ttgctgggattgttgatggtcttccttcatggatcctggtctgtttatcgttttcagttt 26007048

                                                                            
Query: 385      gcaaatcttcctttgccccttaatgctgagcaggctggtaagcggnggttctcagaggct 444
                ||||||||||||||||||||| ||||||| |||||||| |||||  ||||||||||||| 
Sbjct: 26007047 gcaaatcttcctttgccccttgatgctgaacaggctggcaagcgtgggttctcagaggca 26006988

                                        
Query: 445      tctgcccttaagcatgtgaagtac 468
                ||||| ||  ||||||| ||||||
Sbjct: 26006987 tctgctctggagcatgttaagtac 26006964



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                            
Query: 208      acatacagaatgcctcgagggcgaggttcgtctgtgtcaacccaagagaagcctaatgct 267
                |||| ||||||||||||||||||||| || |||||  ||||||| ||||| || || | |
Sbjct: 26007224 acatgcagaatgcctcgagggcgaggctcttctgtcacaacccatgagaaacccaaagtt 26007165

                            
Query: 268      gatgcagcagtc 279
                |||| |||||||
Sbjct: 26007164 gatgaagcagtc 26007153
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>emb|AL662958.3|OSJN00156 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019D11,
             complete sequence
          Length = 163039

 Score =  145 bits (73), Expect = 2e-31
 Identities = 126/144 (87%)
 Strand = Plus / Minus

                                                                         
Query: 325   ttgctggggttgtttatacttttccttcatggatcctggtctgtttaccgtatgcagttt 384
             |||||||| ||||| ||  | |||||||||||||||||||||||||| ||| | ||||||
Sbjct: 41434 ttgctgggattgttgatggtcttccttcatggatcctggtctgtttatcgttttcagttt 41375

                                                                         
Query: 385   gcaaatcttcctttgccccttaatgctgagcaggctggtaagcggnggttctcagaggct 444
             ||||||||||||||||||||| ||||||| |||||||| |||||  ||||||||||||| 
Sbjct: 41374 gcaaatcttcctttgccccttgatgctgaacaggctggcaagcgtgggttctcagaggca 41315

                                     
Query: 445   tctgcccttaagcatgtgaagtac 468
             ||||| ||  ||||||| ||||||
Sbjct: 41314 tctgctctggagcatgttaagtac 41291



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                         
Query: 208   acatacagaatgcctcgagggcgaggttcgtctgtgtcaacccaagagaagcctaatgct 267
             |||| ||||||||||||||||||||| || |||||  ||||||| ||||| || || | |
Sbjct: 41551 acatgcagaatgcctcgagggcgaggctcttctgtcacaacccatgagaaacccaaagtt 41492

                         
Query: 268   gatgcagcagtc 279
             |||| |||||||
Sbjct: 41491 gatgaagcagtc 41480
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>emb|AL731629.2|OSJN00274 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0061C13,
              complete sequence
          Length = 139226

 Score =  145 bits (73), Expect = 2e-31
 Identities = 126/144 (87%)
 Strand = Plus / Minus

                                                                          
Query: 325    ttgctggggttgtttatacttttccttcatggatcctggtctgtttaccgtatgcagttt 384
              |||||||| ||||| ||  | |||||||||||||||||||||||||| ||| | ||||||
Sbjct: 133369 ttgctgggattgttgatggtcttccttcatggatcctggtctgtttatcgttttcagttt 133310

                                                                          
Query: 385    gcaaatcttcctttgccccttaatgctgagcaggctggtaagcggnggttctcagaggct 444
              ||||||||||||||||||||| ||||||| |||||||| |||||  ||||||||||||| 
Sbjct: 133309 gcaaatcttcctttgccccttgatgctgaacaggctggcaagcgtgggttctcagaggca 133250

                                      
Query: 445    tctgcccttaagcatgtgaagtac 468
              ||||| ||  ||||||| ||||||
Sbjct: 133249 tctgctctggagcatgttaagtac 133226



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                          
Query: 208    acatacagaatgcctcgagggcgaggttcgtctgtgtcaacccaagagaagcctaatgct 267
              |||| ||||||||||||||||||||| || |||||  ||||||| ||||| || || | |
Sbjct: 133486 acatgcagaatgcctcgagggcgaggctcttctgtcacaacccatgagaaacccaaagtt 133427

                          
Query: 268    gatgcagcagtc 279
              |||| |||||||
Sbjct: 133426 gatgaagcagtc 133415
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>ref|XM_473207.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2607

 Score =  143 bits (72), Expect = 6e-31
 Identities = 110/123 (89%)
 Strand = Plus / Plus

                                                                       
Query: 346 ttccttcatggatcctggtctgtttaccgtatgcagtttgcaaatcttcctttgcccctt 405
           |||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||
Sbjct: 7   ttccttcatggatcctggtctgtttatcgttttcagtttgcaaatcttcctttgcccctt 66

                                                                       
Query: 406 aatgctgagcaggctggtaagcggnggttctcagaggcttctgcccttaagcatgtgaag 465
            ||||||| |||||||| |||||  ||||||||||||| ||||| ||  ||||||| |||
Sbjct: 67  gatgctgaacaggctggcaagcgtgggttctcagaggcatctgctctggagcatgttaag 126

              
Query: 466 tac 468
           |||
Sbjct: 127 tac 129
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>gb|AC151485.5| Monodelphis domestica, clone XX-214B11, complete sequence
          Length = 182310

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 114    ccagcctccctctgctcctccc 135
              ||||||||||||||||||||||
Sbjct: 144662 ccagcctccctctgctcctccc 144641
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>ref|XM_364860.1| Magnaporthe grisea 70-15 hypothetical protein (MG09705.4) partial
           mRNA
          Length = 966

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 4   cgggcgtctgctgctgctgct 24
           |||||||||||||||||||||
Sbjct: 490 cgggcgtctgctgctgctgct 470
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>emb|BX927144.24| Zebrafish DNA sequence from clone CH211-216K22 in linkage group 8,
            complete sequence
          Length = 168503

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 186  ctggcgtttcacttacatttaaacataca 214
            |||||||||||| |||||||||| |||||
Sbjct: 1900 ctggcgtttcacctacatttaaaaataca 1872
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>emb|BX530098.6| Zebrafish DNA sequence from clone RP71-1G9, complete sequence
          Length = 156637

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 186   ctggcgtttcacttacatttaaacataca 214
             |||||||||||| |||||||||| |||||
Sbjct: 68357 ctggcgtttcacctacatttaaaaataca 68385
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>emb|BX784023.10| Zebrafish DNA sequence from clone DKEY-163F12 in linkage group 8,
           complete sequence
          Length = 231254

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 186 ctggcgtttcacttacatttaaacataca 214
           |||||||||||| |||||||||| |||||
Sbjct: 101 ctggcgtttcacctacatttaaaaataca 129
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>gb|AC012377.5|AC012377 Homo sapiens chromosome 15 clone RP11-325N19 map 15q14, complete
             sequence
          Length = 197782

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 118   cctccctctgctcctcccctc 138
             |||||||||||||||||||||
Sbjct: 15308 cctccctctgctcctcccctc 15288



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 118   cctccctctgctcctcccctc 138
             |||||||||||||||||||||
Sbjct: 15291 cctccctctgctcctcccctc 15271
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>gb|AC023908.6|AC023908 Homo sapiens chromosome 15 clone RP11-37C7 map 15q14, complete sequence
          Length = 169670

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 118   cctccctctgctcctcccctc 138
             |||||||||||||||||||||
Sbjct: 90477 cctccctctgctcctcccctc 90457



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 118   cctccctctgctcctcccctc 138
             |||||||||||||||||||||
Sbjct: 90460 cctccctctgctcctcccctc 90440
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>ref|XM_364064.1| Magnaporthe grisea 70-15 hypothetical protein (MG08909.4) partial
           mRNA
          Length = 2766

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 2   tgcgggcgtctgctgctgct 21
           ||||||||||||||||||||
Sbjct: 549 tgcgggcgtctgctgctgct 530
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>ref|XM_419772.1| PREDICTED: Gallus gallus similar to ST3A1 (LOC421740), mRNA
          Length = 1398

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 382 tttgcaaatcttcctttgcc 401
           ||||||||||||||||||||
Sbjct: 363 tttgcaaatcttcctttgcc 382
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>gb|AC137592.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone
             OSJNBa0035B22, complete sequence
          Length = 155788

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 118   cctccctctgctcctcccctcgccgtcg 145
             ||||||||| |||||| |||||||||||
Sbjct: 23908 cctccctctcctcctctcctcgccgtcg 23881
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>gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, complete sequence
          Length = 1212674

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 72     cctcatcccctccccttcca 91
              ||||||||||||||||||||
Sbjct: 765625 cctcatcccctccccttcca 765606
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>gb|AC136965.2| Canis familiaris clone RP81-213K20, complete sequence
          Length = 157884

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 119    ctccctctgctcctcccctc 138
              ||||||||||||||||||||
Sbjct: 121677 ctccctctgctcctcccctc 121658
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>gb|AC124364.4| Mus musculus BAC clone RP24-538E16 from chromosome 12, complete
             sequence
          Length = 177697

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 65    cctgccgcctcatcccctcc 84
             ||||||||||||||||||||
Sbjct: 77305 cctgccgcctcatcccctcc 77324
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>gb|AC095281.6| Rattus norvegicus 4 BAC CH230-10M16 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 228330

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 116   agcctccctctgctcctccc 135
             ||||||||||||||||||||
Sbjct: 28901 agcctccctctgctcctccc 28920
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>gb|AC093043.6| Mus Musculus Strain C57BL6/J Chromosome 14 BAC, RP23-337O1, complete
              sequence
          Length = 232491

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 433    ttctcagaggcttctgccct 452
              ||||||||||||||||||||
Sbjct: 159605 ttctcagaggcttctgccct 159586
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>emb|BX842650.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 5/11
          Length = 349723

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 174    attcttcttccgctggcgtt 193
              ||||||||||||||||||||
Sbjct: 244157 attcttcttccgctggcgtt 244176
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>emb|AL589722.17| Mouse DNA sequence from clone RP23-169M24 on chromosome 13 Contains the
              gene for a novel protein similar to ribosomal protein S8
              (Rps8) and a CpG island, complete sequence
          Length = 200125

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 436    tcagaggcttctgcccttaa 455
              ||||||||||||||||||||
Sbjct: 129318 tcagaggcttctgcccttaa 129337
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>emb|CR318611.4| Zebrafish DNA sequence from clone DKEY-199F5 in linkage group 16,
             complete sequence
          Length = 162349

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 195   cacttacatttaaacatacagaat 218
             |||||||||||||| |||||||||
Sbjct: 87050 cacttacatttaaaaatacagaat 87073
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>emb|BX248113.22| Zebrafish DNA sequence from clone CH211-132F21, complete sequence
          Length = 146026

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 195   cacttacatttaaacatacagaat 218
             |||||||||||||| |||||||||
Sbjct: 18233 cacttacatttaaaaatacagaat 18210
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>gb|AC093022.4| Mus Musculus Chromosome 14 Strain C57Bl6/J Clone RP23-297E8, complete
             sequence
          Length = 158591

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 433   ttctcagaggcttctgccct 452
             ||||||||||||||||||||
Sbjct: 43739 ttctcagaggcttctgccct 43720
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>ref|XM_695675.1| PREDICTED: Danio rerio similar to immunoglobulin superfamily,
          member 3 isoform 2 (LOC572021), mRNA
          Length = 2594

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 5  gggcgtctgctgctgctgct 24
          ||||||||||||||||||||
Sbjct: 19 gggcgtctgctgctgctgct 38
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>gb|AC157591.2| Mus musculus BAC clone RP23-311C13 from chromosome 9, complete sequence
          Length = 213461

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 196   acttacatttaaacatacag 215
             ||||||||||||||||||||
Sbjct: 94705 acttacatttaaacatacag 94724
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>emb|BX682531.11| Zebrafish DNA sequence from clone CH211-12C17 in linkage group 23,
             complete sequence
          Length = 171113

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 195   cacttacatttaaacatacagaat 218
             |||||||||||||| |||||||||
Sbjct: 88909 cacttacatttaaaaatacagaat 88886
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>dbj|AK080448.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length
           enriched library, clone:A730015F23
           product:unclassifiable, full insert sequence
          Length = 821

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 72  cctcatcccctccccttccagact 95
           ||||||||| ||||||||||||||
Sbjct: 581 cctcatcccttccccttccagact 558
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 118      cctccctctgctcctcccctcgccgtcg 145
                ||||||||| |||||| |||||||||||
Sbjct: 21818474 cctccctctcctcctctcctcgccgtcg 21818447
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>gb|AC098828.3| Homo sapiens BAC clone RP11-644K8 from 2, complete sequence
          Length = 127408

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 434   tctcagaggcttctgccctt 453
             ||||||||||||||||||||
Sbjct: 44343 tctcagaggcttctgccctt 44324
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>gb|AC009034.10| Homo sapiens chromosome 16 clone RP11-141O15, complete sequence
          Length = 166419

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                         
Query: 425    agcggnggttctcagaggcttctgccc 451
              ||||| |||||||||||| ||||||||
Sbjct: 118121 agcggcggttctcagagggttctgccc 118095
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>emb|BX934942.1| Gallus gallus finished cDNA, clone ChEST151l24
          Length = 1382

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 382 tttgcaaatcttcctttgcc 401
           ||||||||||||||||||||
Sbjct: 347 tttgcaaatcttcctttgcc 366
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>emb|BX323052.5| Zebrafish DNA sequence from clone CH211-234A12 in linkage group 24,
              complete sequence
          Length = 173982

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 195    cacttacatttaaacatacagaat 218
              |||||||||||||| |||||||||
Sbjct: 119847 cacttacatttaaaaatacagaat 119824
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>gb|AC090957.1| Homo sapiens chromosome 3 clone RP11-708D1 map 3p, complete sequence
          Length = 151677

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 328   ctggggttgtttatacttttcctt 351
             |||||||||||| |||||||||||
Sbjct: 63357 ctggggttgtttgtacttttcctt 63380
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>emb|BX248122.10| Zebrafish DNA sequence from clone CH211-214C20 in linkage group 4,
              complete sequence
          Length = 216208

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 195    cacttacatttaaacatacagaat 218
              |||||||||||||| |||||||||
Sbjct: 213476 cacttacatttaaaaatacagaat 213453
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>emb|BX511214.8| Zebrafish DNA sequence from clone DKEY-191C11, complete sequence
          Length = 211331

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 195   cacttacatttaaacatacagaat 218
             |||||||||||||| |||||||||
Sbjct: 24293 cacttacatttaaaaatacagaat 24316
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>emb|BX001033.6| Zebrafish DNA sequence from clone CH211-286F4 in linkage group 7,
             complete sequence
          Length = 144689

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 195   cacttacatttaaacatacagaat 218
             |||||||||||||| |||||||||
Sbjct: 95163 cacttacatttaaaaatacagaat 95140
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>dbj|AK069699.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027G01, full
           insert sequence
          Length = 2196

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 118 cctccctctgctcctcccctcgccgtcg 145
           ||||||||| |||||| |||||||||||
Sbjct: 100 cctccctctcctcctctcctcgccgtcg 127
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>emb|BX649578.14| Zebrafish DNA sequence from clone CH211-196L7 in linkage group 18,
              complete sequence
          Length = 211922

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 376    atgcagtttgcaaatcttcctttg 399
              ||||||||||||||||||| ||||
Sbjct: 141769 atgcagtttgcaaatcttcatttg 141792
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>emb|AL714005.17| Zebrafish DNA sequence from clone BUSM1-13F19 in linkage group 9,
             complete sequence
          Length = 104829

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 195   cacttacatttaaacatacagaat 218
             |||||||||||||| |||||||||
Sbjct: 43154 cacttacatttaaaaatacagaat 43177
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>emb|AL928944.8| Zebrafish DNA sequence from clone DKEYP-2H4 in linkage group 8,
            complete sequence
          Length = 55565

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 195  cacttacatttaaacatacagaat 218
            |||||||||||||| |||||||||
Sbjct: 7720 cacttacatttaaaaatacagaat 7743
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>tpe|BN000728.1| TPA: TPA_exp: Canis familiaris col6a3 gene for collagen, type VI, alpha
             3 and mlph gene for melanophilin
          Length = 212696

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 119   ctccctctgctcctcccctc 138
             ||||||||||||||||||||
Sbjct: 36460 ctccctctgctcctcccctc 36479
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>emb|CR450837.12| Zebrafish DNA sequence from clone CH211-51L13 in linkage group 16,
              complete sequence
          Length = 166747

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 195    cacttacatttaaacatacagaat 218
              |||||||||||||| |||||||||
Sbjct: 127993 cacttacatttaaaaatacagaat 128016
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>emb|CT010507.11| Mouse DNA sequence from clone RP23-259G10 on chromosome 9, complete
            sequence
          Length = 213433

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 196  acttacatttaaacatacag 215
            ||||||||||||||||||||
Sbjct: 4484 acttacatttaaacatacag 4503
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>gb|AC137708.16| Mus musculus chromosome 3, clone RP24-277H8, complete sequence
          Length = 154779

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 72    cctcatcccctccccttccagact 95
             ||||||||| ||||||||||||||
Sbjct: 79232 cctcatcccttccccttccagact 79209
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>emb|AL079307.7|CNS00M8N Human chromosome 14 DNA sequence BAC R-280K24 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 190519

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 195   cacttacatttaaacataca 214
             ||||||||||||||||||||
Sbjct: 72141 cacttacatttaaacataca 72122
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>emb|AJ920047.1| Canis familiaris melanophilin gene locus, breed Doberman
          Length = 197532

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 119   ctccctctgctcctcccctc 138
             ||||||||||||||||||||
Sbjct: 36510 ctccctctgctcctcccctc 36529
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>emb|AL954724.9| Zebrafish DNA sequence from clone CH211-265P12, complete sequence
          Length = 136892

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 195   cacttacatttaaacatacagaat 218
             |||||||||||||| |||||||||
Sbjct: 76181 cacttacatttaaaaatacagaat 76158
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>emb|AL845430.12| Mouse DNA sequence from clone RP23-402L5 on chromosome 2, complete
              sequence
          Length = 201232

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 64     gcctgccgcctcatcccctccccttcca 91
              ||||||| ||||| ||||||||||||||
Sbjct: 149951 gcctgcctcctcagcccctccccttcca 149924
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>gb|AC140321.3| Mus musculus BAC clone RP23-402K6 from 1, complete sequence
          Length = 215225

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 323    tgttgctggggttgtttatacttt 346
              ||||||||||| ||||||||||||
Sbjct: 124748 tgttgctggggctgtttatacttt 124725
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>gb|AC159824.2| Mus musculus BAC clone RP23-122E19 from chromosome 9, complete sequence
          Length = 225745

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 119    ctccctctgctcctcccctc 138
              ||||||||||||||||||||
Sbjct: 141614 ctccctctgctcctcccctc 141633
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>emb|AL669961.8| Mouse DNA sequence from clone RP23-43M17 on chromosome 2, complete
             sequence
          Length = 202937

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 385   gcaaatcttcctttgcccct 404
             ||||||||||||||||||||
Sbjct: 23242 gcaaatcttcctttgcccct 23223


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,104,340
Number of Sequences: 3902068
Number of extensions: 5104340
Number of successful extensions: 259588
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 259169
Number of HSP's gapped (non-prelim): 418
length of query: 491
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 469
effective length of database: 17,147,199,772
effective search space: 8042036693068
effective search space used: 8042036693068
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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