Clone Name | bastl02h11 |
---|---|
Clone Library Name | barley_pub |
>gb|AY483150.1| Hordeum vulgare putative cellulose synthase catalytic subunit (CesA1) mRNA, complete cds Length = 3605 Score = 827 bits (417), Expect = 0.0 Identities = 426/429 (99%) Strand = Plus / Plus Query: 35 gtgggaggagccgctccagctcggttgtcggcggtgccgggttgatcgccctgccgcgcc 94 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gtgggaggagccgctccagctcggttgtcggcggtgccgggttgatcgccctgccgcgcc 60 Query: 95 atggacggcgacgcggacgccctgaagtccgggaggcacggggccggggacgtgtgccag 154 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 atggacggcgacgcggacgccctgaagtccgggaggcacggggccggggacgtgtgccag 120 Query: 155 atctgcgccgacagcctgggcaccacggtggacggcgaggtcttcgccgcctgcgacgtc 214 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 121 atctgcgccgacagcctgggcaccacggtggacggcgaggtcttcaccgcctgcgacgtc 180 Query: 215 tgccgcttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcacccaggcc 274 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tgccgcttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcacccaggcc 240 Query: 275 tgcctccagtgcaagaccaagtacaagcgccacaaagggagcccagcgatccgcggggag 334 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 241 tgcctccagtgcaagaccaagtacaagcgccacaaagggagcccagtgatccgcggggag 300 Query: 335 gaaggcgacgacactgatgccgatgatggcagtgacttcaactaccctgcatctggcact 394 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gaaggcgacgacactgatgccgatgatggcagtgacttcaactaccctgcatctggcact 360 Query: 395 gaggaccagaagcagaagattgctgataggatgcgcagctggcgcatgaacaccgggggc 454 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 361 gaggaccagaagcagaagattgctgataggatgcgcagctggcgcatgaacaccggtggc 420 Query: 455 agtgggaat 463 ||||||||| Sbjct: 421 agtgggaat 429
>dbj|AB158407.1| Triticum aestivum CesA mRNA for putative cellulose synthase, complete cds Length = 3681 Score = 767 bits (387), Expect = 0.0 Identities = 434/449 (96%), Gaps = 3/449 (0%) Strand = Plus / Plus Query: 11 ccccctccgcgctccggacattgggtgggaggagccgctccagctcggttgtcggcggtg 70 |||||||||||||||| |||||||||||||||||| ||||||||||||||||||| || Sbjct: 5 ccccctccgcgctccgcacattgggtgggaggagctgctccagctcggttgtcgg---tg 61 Query: 71 ccgggttgatcgccctgccgcgccatggacggcgacgcggacgccctgaagtccgggagg 130 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 ccgggtggatcgccctgccgcgccatggacggcgacgcggacgccctgaagtccgggagg 121 Query: 131 cacggggccggggacgtgtgccagatctgcgccgacagcctgggcaccacggtggacggc 190 |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 122 cacggggccggggacgtgtgccagatctgcgccgacgggctgggcaccacggtggacggc 181 Query: 191 gaggtcttcgccgcctgcgacgtctgccgcttcccggtctgccgcccctgctacgagcac 250 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 gaggtcttcaccgcctgcgacgtctgccgcttcccggtctgccgcccctgctacgagcac 241 Query: 251 gagcgcaaggagggcacccaggcctgcctccagtgcaagaccaagtacaagcgccacaaa 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 242 gagcgcaaggagggcacccaggcctgcctccagtgcaagaccaagtacaagcgccacaga 301 Query: 311 gggagcccagcgatccgcggggaggaaggcgacgacactgatgccgatgatggcagtgac 370 |||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 302 gggagccctccgatccgcggggaggaaggcgatgacaccgatgccgatgatggcagtgac 361 Query: 371 ttcaactaccctgcatctggcactgaggaccagaagcagaagattgctgataggatgcgc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 362 ttcaactaccctgcatctggcactgaggaccagaagcagaagattgctgataggatgcgc 421 Query: 431 agctggcgcatgaacaccgggggcagtgg 459 ||||||||||||||||||||||| ||||| Sbjct: 422 agctggcgcatgaacaccgggggtagtgg 450
>gb|BT009438.1| Triticum aestivum clone wlmk4.pk0015.a11:fis, full insert mRNA sequence Length = 3626 Score = 700 bits (353), Expect = 0.0 Identities = 400/415 (96%), Gaps = 3/415 (0%) Strand = Plus / Plus Query: 45 ccgctccagctcggttgtcggcggtgccgggttgatcgccctgccgcgccatggacggcg 104 |||||||||||| ||||| |||||| || | |||||| |||||||||||||||||||| Sbjct: 13 ccgctccagctc---tgtcgtcggtgcgggttggatcgctctgccgcgccatggacggcg 69 Query: 105 acgcggacgccctgaagtccgggaggcacggggccggggacgtgtgccagatctgcgccg 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70 acgcggacgccctgaagtccgggaggcacggggccggggacgtgtgccagatctgcgccg 129 Query: 165 acagcctgggcaccacggtggacggcgaggtcttcgccgcctgcgacgtctgccgcttcc 224 || |||||||||||||| |||||||||| |||||| |||||||||||||||||||||||| Sbjct: 130 acggcctgggcaccacgttggacggcgacgtcttcaccgcctgcgacgtctgccgcttcc 189 Query: 225 cggtctgccgcccctgctacgagcacgagcgcaaggagggcacccaggcctgcctccagt 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 190 cggtctgccgcccctgctacgagcacgagcgcaaggagggcacccaggcctgcctccagt 249 Query: 285 gcaagaccaagtacaagcgccacaaagggagcccagcgatccgcggggaggaaggcgacg 344 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 250 gcaagaccaagtacaagcgccacagagggagcccagcgatccgcggggaggaaggcgacg 309 Query: 345 acactgatgccgatgatggcagtgacttcaactaccctgcatctggcactgaggaccaga 404 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 310 acactgatgccgatgatggtagtgacttcaactaccctgcatctggcactgaggaccaga 369 Query: 405 agcagaagattgctgataggatgcgcagctggcgcatgaacaccgggggcagtgg 459 |||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 370 agcagaagattgctgacaggatgcgcagctggcgcatgaacaccgggggcagtgg 424
>gb|DQ020211.1| Bambusa oldhamii cellulose synthase BoCesA4a mRNA, complete cds Length = 3756 Score = 458 bits (231), Expect = e-126 Identities = 324/355 (91%) Strand = Plus / Plus Query: 90 gcgccatggacggcgacgcggacgccctgaagtccgggaggcacggggccggggacgtgt 149 |||||||||| ||||||||||| ||| ||||||| ||||||||||| |||| | |||| Sbjct: 292 gcgccatggagggcgacgcggaggccgtgaagtcggggaggcacggcagcgggcaggtgt 351 Query: 150 gccagatctgcgccgacagcctgggcaccacggtggacggcgaggtcttcgccgcctgcg 209 |||||||||||| |||| || |||||||||||| ||| ||||| |||||||||||||||| Sbjct: 352 gccagatctgcggcgacggcgtgggcaccacggcggagggcgacgtcttcgccgcctgcg 411 Query: 210 acgtctgccgcttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcaccc 269 |||||||| |||||||||| ||||| |||||||||||| ||||||||||||| ||||||| Sbjct: 412 acgtctgcggcttcccggtgtgccggccctgctacgagtacgagcgcaaggacggcaccc 471 Query: 270 aggcctgcctccagtgcaagaccaagtacaagcgccacaaagggagcccagcgatccgcg 329 |||| |||| ||||||||||| ||||||||||||||||||||||||||| ||||||| | Sbjct: 472 aggcgtgcccgcagtgcaagactaagtacaagcgccacaaagggagcccaccgatccgtg 531 Query: 330 gggaggaaggcgacgacactgatgccgatgatggcagtgacttcaactaccctgcatctg 389 ||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 532 gggaggaaggcgatgacactgatgctgatgatgccagtgacttcaactaccctgcatctg 591 Query: 390 gcactgaggaccagaagcagaagattgctgataggatgcgcagctggcgcatgaa 444 ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 592 gcaatgatgaccagaagcagaagattgctgataggatgcgcagctggcgcatgaa 646
>ref|XM_477093.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3954 Score = 434 bits (219), Expect = e-118 Identities = 321/355 (90%) Strand = Plus / Plus Query: 90 gcgccatggacggcgacgcggacgccctgaagtccgggaggcacggggccggggacgtgt 149 |||||||||||||||||||||| ||| ||||||| |||||||||||| |||| | | || Sbjct: 432 gcgccatggacggcgacgcggatgccgtgaagtcggggaggcacgggagcgggcaggcgt 491 Query: 150 gccagatctgcgccgacagcctgggcaccacggtggacggcgaggtcttcgccgcctgcg 209 |||||||||||| |||| || ||||||| |||| ||| ||||| || ||||||||||||| Sbjct: 492 gccagatctgcggcgacggcgtgggcacgacggcggagggcgacgtgttcgccgcctgcg 551 Query: 210 acgtctgccgcttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcaccc 269 |||||||| |||||||||| |||||||||||||||||| ||||||||||||| ||||||| Sbjct: 552 acgtctgcggcttcccggtgtgccgcccctgctacgagtacgagcgcaaggatggcaccc 611 Query: 270 aggcctgcctccagtgcaagaccaagtacaagcgccacaaagggagcccagcgatccgcg 329 |||| |||| |||||||||||||||||||||||||||||| |||||||| |||||||| | Sbjct: 612 aggcttgcccccagtgcaagaccaagtacaagcgccacaaggggagcccggcgatccgtg 671 Query: 330 gggaggaaggcgacgacactgatgccgatgatggcagtgacttcaactaccctgcatctg 389 ||||||||||||| || |||||||| ||||||| |||||||| ||||||||||||||||| Sbjct: 672 gggaggaaggcgaggatactgatgctgatgatgtcagtgactacaactaccctgcatctg 731 Query: 390 gcactgaggaccagaagcagaagattgctgataggatgcgcagctggcgcatgaa 444 ||| || ||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 732 gcagtgccgaccagaagcagaagattgctgataggatgcgcagttggcgcatgaa 786
>dbj|AK072356.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023059I02, full insert sequence Length = 3954 Score = 434 bits (219), Expect = e-118 Identities = 321/355 (90%) Strand = Plus / Plus Query: 90 gcgccatggacggcgacgcggacgccctgaagtccgggaggcacggggccggggacgtgt 149 |||||||||||||||||||||| ||| ||||||| |||||||||||| |||| | | || Sbjct: 432 gcgccatggacggcgacgcggatgccgtgaagtcggggaggcacgggagcgggcaggcgt 491 Query: 150 gccagatctgcgccgacagcctgggcaccacggtggacggcgaggtcttcgccgcctgcg 209 |||||||||||| |||| || ||||||| |||| ||| ||||| || ||||||||||||| Sbjct: 492 gccagatctgcggcgacggcgtgggcacgacggcggagggcgacgtgttcgccgcctgcg 551 Query: 210 acgtctgccgcttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcaccc 269 |||||||| |||||||||| |||||||||||||||||| ||||||||||||| ||||||| Sbjct: 552 acgtctgcggcttcccggtgtgccgcccctgctacgagtacgagcgcaaggatggcaccc 611 Query: 270 aggcctgcctccagtgcaagaccaagtacaagcgccacaaagggagcccagcgatccgcg 329 |||| |||| |||||||||||||||||||||||||||||| |||||||| |||||||| | Sbjct: 612 aggcttgcccccagtgcaagaccaagtacaagcgccacaaggggagcccggcgatccgtg 671 Query: 330 gggaggaaggcgacgacactgatgccgatgatggcagtgacttcaactaccctgcatctg 389 ||||||||||||| || |||||||| ||||||| |||||||| ||||||||||||||||| Sbjct: 672 gggaggaaggcgaggatactgatgctgatgatgtcagtgactacaactaccctgcatctg 731 Query: 390 gcactgaggaccagaagcagaagattgctgataggatgcgcagctggcgcatgaa 444 ||| || ||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 732 gcagtgccgaccagaagcagaagattgctgataggatgcgcagttggcgcatgaa 786
>gb|AF200533.1|AF200533 Zea mays cellulose synthase-9 (CesA-9) mRNA, complete cds Length = 3795 Score = 375 bits (189), Expect = e-101 Identities = 312/353 (88%) Strand = Plus / Plus Query: 92 gccatggacggcgacgcggacgccctgaagtccgggaggcacggggccggggacgtgtgc 151 |||||||| ||||||||||||| | ||||||| ||||||| ||||| ||| | |||||| Sbjct: 235 gccatggagggcgacgcggacggcgtgaagtcggggaggcgcgggggagggcaggtgtgc 294 Query: 152 cagatctgcgccgacagcctgggcaccacggtggacggcgaggtcttcgccgcctgcgac 211 |||||||||| ||| || ||||||| |||| ||| || || |||||| ||||||||||| Sbjct: 295 cagatctgcggcgatggcgtgggcactacggcggagggagacgtcttcaccgcctgcgac 354 Query: 212 gtctgccgcttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcacccag 271 |||||| | |||||||| |||||||||||||||||| ||||||||||||| ||||| || Sbjct: 355 gtctgcgggttcccggtgtgccgcccctgctacgagtacgagcgcaaggacggcacacaa 414 Query: 272 gcctgcctccagtgcaagaccaagtacaagcgccacaaagggagcccagcgatccgcggg 331 || |||| ||||||||| | |||||||||||||||||| ||||| ||||||||||| ||| Sbjct: 415 gcgtgcccccagtgcaaaaacaagtacaagcgccacaaggggagtccagcgatccgaggg 474 Query: 332 gaggaaggcgacgacactgatgccgatgatggcagtgacttcaactaccctgcatctggc 391 |||||||| ||||| |||||||||||||||| || |||||||||||||||||||||||| Sbjct: 475 gaggaaggagacgatactgatgccgatgatgctagcgacttcaactaccctgcatctggc 534 Query: 392 actgaggaccagaagcagaagattgctgataggatgcgcagctggcgcatgaa 444 | ||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 535 aatgacgaccagaagcagaagattgctgacaggatgcgcagctggcgcatgaa 587
>gb|AF200528.1|AF200528 Zea mays cellulose synthase-4 (CesA-4) mRNA, complete cds Length = 3745 Score = 363 bits (183), Expect = 3e-97 Identities = 311/354 (87%), Gaps = 6/354 (1%) Strand = Plus / Plus Query: 92 gccatggacggcgacgcggacgccctgaagtccgggaggcacggggccggggacgtgtgc 151 |||||||| ||||||||||||| | ||||||| ||||||| ||| | ||| | |||||| Sbjct: 317 gccatggagggcgacgcggacggcgtgaagtcggggaggcgcggtggcggacaggtgtgc 376 Query: 152 cagatctgcgccgacagcctgggcaccacggtggacggcgaggtcttcgccgcctgcgac 211 |||||||||| |||| || |||||||||||| ||| || || |||||||||||||||||| Sbjct: 377 cagatctgcggcgacggcgtgggcaccacggcggagggggacgtcttcgccgcctgcgac 436 Query: 212 gtctgccgcttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcacccag 271 |||||| | || ||||| |||||||||||||||||| ||||||||||||| ||||| ||| Sbjct: 437 gtctgcgggtttccggtgtgccgcccctgctacgagtacgagcgcaaggacggcacgcag 496 Query: 272 gcctgcctccagtgcaagaccaagtacaagcgccacaaagggagcccagcgatccgcggg 331 || |||| |||||||||||||||||||||||||||||| |||||||| |||||||| ||| Sbjct: 497 gcgtgcccccagtgcaagaccaagtacaagcgccacaaggggagcccggcgatccgtggg 556 Query: 332 gaggaaggcgacgacactgatgccgatgatggcagtgacttcaactaccctgcatctggc 391 |||||||| |||||||||||||||||| || |||||||| |||| |||||||||| Sbjct: 557 gaggaaggagacgacactgatgccgat------agcgacttcaattaccttgcatctggc 610 Query: 392 actgaggaccagaagcagaagattgctgataggatgcgcagctggcgcatgaac 445 | |||||||||||||||||||||||| || || ||||||||||||||||||||| Sbjct: 611 aatgaggaccagaagcagaagattgccgacagaatgcgcagctggcgcatgaac 664
>gb|AY108113.1| Zea mays PCO126465 mRNA sequence Length = 3763 Score = 363 bits (183), Expect = 3e-97 Identities = 311/354 (87%), Gaps = 6/354 (1%) Strand = Plus / Plus Query: 92 gccatggacggcgacgcggacgccctgaagtccgggaggcacggggccggggacgtgtgc 151 |||||||| ||||||||||||| | ||||||| ||||||| ||| | ||| | |||||| Sbjct: 335 gccatggagggcgacgcggacggcgtgaagtcggggaggcgcggtggcggacaggtgtgc 394 Query: 152 cagatctgcgccgacagcctgggcaccacggtggacggcgaggtcttcgccgcctgcgac 211 |||||||||| |||| || |||||||||||| ||| || || |||||||||||||||||| Sbjct: 395 cagatctgcggcgacggcgtgggcaccacggcggagggggacgtcttcgccgcctgcgac 454 Query: 212 gtctgccgcttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcacccag 271 |||||| | || ||||| |||||||||||||||||| ||||||||||||| ||||| ||| Sbjct: 455 gtctgcgggtttccggtgtgccgcccctgctacgagtacgagcgcaaggacggcacgcag 514 Query: 272 gcctgcctccagtgcaagaccaagtacaagcgccacaaagggagcccagcgatccgcggg 331 || |||| |||||||||||||||||||||||||||||| |||||||| |||||||| ||| Sbjct: 515 gcgtgcccccagtgcaagaccaagtacaagcgccacaaggggagcccggcgatccgtggg 574 Query: 332 gaggaaggcgacgacactgatgccgatgatggcagtgacttcaactaccctgcatctggc 391 |||||||| |||||||||||||||||| || |||||||| |||| |||||||||| Sbjct: 575 gaggaaggagacgacactgatgccgat------agcgacttcaattaccttgcatctggc 628 Query: 392 actgaggaccagaagcagaagattgctgataggatgcgcagctggcgcatgaac 445 | |||||||||||||||||||||||| || || ||||||||||||||||||||| Sbjct: 629 aatgaggaccagaagcagaagattgccgacagaatgcgcagctggcgcatgaac 682
>gb|DQ020212.1| Bambusa oldhamii cellulose synthase BoCesA4b mRNA, partial cds Length = 3409 Score = 353 bits (178), Expect = 3e-94 Identities = 273/305 (89%), Gaps = 6/305 (1%) Strand = Plus / Plus Query: 146 gtgtgccagatctgcgccgacagcctgggcaccacggtggacggcgaggtcttcgccgcc 205 |||||||||||||||| |||| || |||||||||||| ||| ||||| |||||||||||| Sbjct: 4 gtgtgccagatctgcggcgacggcgtgggcaccacggcggagggcgacgtcttcgccgcc 63 Query: 206 tgcgacgtctgccgcttcccggtctgccgcccctgctacgagcacgagcgcaaggagggc 265 |||||||||||| |||||||||| ||||| |||||||||||| ||||||||||||| ||| Sbjct: 64 tgcgacgtctgcggcttcccggtgtgccggccctgctacgagtacgagcgcaaggacggc 123 Query: 266 acccaggcctgcctccagtgcaagaccaagtacaagcgccacaaagg------gagccca 319 |||||||| |||| ||||||||||| |||||||||||||||||||| |||||| Sbjct: 124 acccaggcgtgcccgcagtgcaagactaagtacaagcgccacaaaggttcatcaagccca 183 Query: 320 gcgatccgcggggaggaaggcgacgacactgatgccgatgatggcagtgacttcaactac 379 | ||||| ||||||| |||||| ||||||||||| ||||||| |||||||||||||||| Sbjct: 184 ccaatccgtggggagggaggcgatgacactgatgctgatgatgccagtgacttcaactac 243 Query: 380 cctgcatctggcactgaggaccagaagcagaagattgctgataggatgcgcagctggcgc 439 ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 cctgcatctggcaacgatgaccagaagcagaagattgctgataggatgcgcagctggcgc 303 Query: 440 atgaa 444 ||||| Sbjct: 304 atgaa 308
>gb|AY112236.1| Zea mays CL1160_1 mRNA sequence Length = 3728 Score = 299 bits (151), Expect = 4e-78 Identities = 258/297 (86%) Strand = Plus / Plus Query: 148 gtgccagatctgcgccgacagcctgggcaccacggtggacggcgaggtcttcgccgcctg 207 |||||||||||||| ||| || ||||||| |||| ||| || || |||||| ||||||| Sbjct: 291 gtgccagatctgcggcgatggcgtgggcactacggcggagggagacgtcttcaccgcctg 350 Query: 208 cgacgtctgccgcttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcac 267 |||||||||| | |||||||| |||||||||||||||||| ||||||||||||| ||||| Sbjct: 351 cgacgtctgcgggttcccggtgtgccgcccctgctacgagtacgagcgcaaggacggcac 410 Query: 268 ccaggcctgcctccagtgcaagaccaagtacaagcgccacaaagggagcccagcgatccg 327 || || || ||||| |||||||||||||||||| ||||| ||||||||||| Sbjct: 411 acaagcgtgnnnnnagtgcnnnnncaagtacaagcgccacaaggggagtccagcgatccg 470 Query: 328 cggggaggaaggcgacgacactgatgccgatgatggcagtgacttcaactaccctgcatc 387 ||||||||||| ||||| |||||||||||||||| || |||||||||||||||||||| Sbjct: 471 aggggaggaaggagacgatactgatgccgatgatgctagcgacttcaactaccctgcatc 530 Query: 388 tggcactgaggaccagaagcagaagattgctgataggatgcgcagctggcgcatgaa 444 ||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 531 tggcaatgacgaccagaagcagaagattgctgacaggatgcgcagctggcgcatgaa 587
>gb|DQ020213.1| Bambusa oldhamii cellulose synthase BoCesA5 mRNA, complete cds Length = 3613 Score = 278 bits (140), Expect = 2e-71 Identities = 260/300 (86%) Strand = Plus / Plus Query: 146 gtgtgccagatctgcgccgacagcctgggcaccacggtggacggcgaggtcttcgccgcc 205 |||||||||||||||| ||||||| ||||||| |||| |||||||||| | ||| | ||| Sbjct: 263 gtgtgccagatctgcggcgacagcgtgggcacgacggcggacggcgagctgttcacggcc 322 Query: 206 tgcgacgtctgccgcttcccggtctgccgcccctgctacgagcacgagcgcaaggagggc 265 |||||||||||| | |||||||| ||||| |||||||||||| ||||||||||||| ||| Sbjct: 323 tgcgacgtctgcgggttcccggtgtgccggccctgctacgagtacgagcgcaaggacggc 382 Query: 266 acccaggcctgcctccagtgcaagaccaagtacaagcgccacaaagggagcccagcgatc 325 |||||||| |||| ||||||||||||||||||||||||||||||||||||||| | || Sbjct: 383 acccaggcgtgcccgcagtgcaagaccaagtacaagcgccacaaagggagcccaccaata 442 Query: 326 cgcggggaggaaggcgacgacactgatgccgatgatggcagtgacttcaactaccctgca 385 || ||||||||| |||| || |||||| ||||||| |||||||||||||||||| ||| Sbjct: 443 cgtggggaggaaagcgaggatgttgatgcagatgatgccagtgacttcaactacccagca 502 Query: 386 tctggcactgaggaccagaagcagaagattgctgataggatgcgcagctggcgcatgaac 445 | |||| |||| || ||||| ||||||||||| ||||||| || ||||||||||||| Sbjct: 503 cccggcaaccaggatcataagcacaagattgctgagaggatgctcacctggcgcatgaac 562
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 222 bits (112), Expect = 8e-55 Identities = 172/192 (89%) Strand = Plus / Minus Query: 118 gaagtccgggaggcacggggccggggacgtgtgccagatctgcgccgacagcctgggcac 177 |||||| |||||||||||| |||| | | |||||||||||||| |||| || ||||||| Sbjct: 5890183 gaagtcggggaggcacgggagcgggcaggcgtgccagatctgcggcgacggcgtgggcac 5890124 Query: 178 cacggtggacggcgaggtcttcgccgcctgcgacgtctgccgcttcccggtctgccgccc 237 |||| ||| ||||| || ||||||||||||||||||||| |||||||||| |||||||| Sbjct: 5890123 gacggcggagggcgacgtgttcgccgcctgcgacgtctgcggcttcccggtgtgccgccc 5890064 Query: 238 ctgctacgagcacgagcgcaaggagggcacccaggcctgcctccagtgcaagaccaagta 297 |||||||||| ||||||||||||| ||||||||||| |||| |||||||||||||||||| Sbjct: 5890063 ctgctacgagtacgagcgcaaggatggcacccaggcttgcccccagtgcaagaccaagta 5890004 Query: 298 caagcgccacaa 309 |||||||||||| Sbjct: 5890003 caagcgccacaa 5889992 Score = 180 bits (91), Expect = 3e-42 Identities = 124/135 (91%) Strand = Plus / Minus Query: 310 agggagcccagcgatccgcggggaggaaggcgacgacactgatgccgatgatggcagtga 369 ||||||||| |||||||| |||||||||||||| || |||||||| ||||||| |||||| Sbjct: 5889696 agggagcccggcgatccgtggggaggaaggcgaggatactgatgctgatgatgtcagtga 5889637 Query: 370 cttcaactaccctgcatctggcactgaggaccagaagcagaagattgctgataggatgcg 429 || |||||||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 5889636 ctacaactaccctgcatctggcagtgccgaccagaagcagaagattgctgataggatgcg 5889577 Query: 430 cagctggcgcatgaa 444 ||| ||||||||||| Sbjct: 5889576 cagttggcgcatgaa 5889562 Score = 58.0 bits (29), Expect = 3e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 220 cttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcacccaggcctgcct 279 ||||||||| |||||| |||||||||| |||||||| |||||||| ||| ||||| Sbjct: 13693009 cttcccggtgtgccgcgactgctacgagtacgagcgccgcgagggcacgcagaactgccc 13692950 Query: 280 ccagtgcaagacc 292 ||||||||||||| Sbjct: 13692949 ccagtgcaagacc 13692937 Score = 50.1 bits (25), Expect = 0.006 Identities = 61/73 (83%) Strand = Plus / Plus Query: 220 cttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcacccaggcctgcct 279 |||||| ||||||||| ||||||||| |||||||| |||||| | ||||| |||| Sbjct: 8528702 cttccccgtctgccgcaactgctacgactacgagcgccgcgagggctcgcaggcttgccc 8528761 Query: 280 ccagtgcaagacc 292 ||||||||||||| Sbjct: 8528762 ccagtgcaagacc 8528774 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 90 gcgccatggacggcgacgcgga 111 |||||||||||||||||||||| Sbjct: 5890341 gcgccatggacggcgacgcgga 5890320
>dbj|AP003748.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1136_A05 Length = 120823 Score = 222 bits (112), Expect = 8e-55 Identities = 172/192 (89%) Strand = Plus / Minus Query: 118 gaagtccgggaggcacggggccggggacgtgtgccagatctgcgccgacagcctgggcac 177 |||||| |||||||||||| |||| | | |||||||||||||| |||| || ||||||| Sbjct: 32631 gaagtcggggaggcacgggagcgggcaggcgtgccagatctgcggcgacggcgtgggcac 32572 Query: 178 cacggtggacggcgaggtcttcgccgcctgcgacgtctgccgcttcccggtctgccgccc 237 |||| ||| ||||| || ||||||||||||||||||||| |||||||||| |||||||| Sbjct: 32571 gacggcggagggcgacgtgttcgccgcctgcgacgtctgcggcttcccggtgtgccgccc 32512 Query: 238 ctgctacgagcacgagcgcaaggagggcacccaggcctgcctccagtgcaagaccaagta 297 |||||||||| ||||||||||||| ||||||||||| |||| |||||||||||||||||| Sbjct: 32511 ctgctacgagtacgagcgcaaggatggcacccaggcttgcccccagtgcaagaccaagta 32452 Query: 298 caagcgccacaa 309 |||||||||||| Sbjct: 32451 caagcgccacaa 32440 Score = 180 bits (91), Expect = 3e-42 Identities = 124/135 (91%) Strand = Plus / Minus Query: 310 agggagcccagcgatccgcggggaggaaggcgacgacactgatgccgatgatggcagtga 369 ||||||||| |||||||| |||||||||||||| || |||||||| ||||||| |||||| Sbjct: 32144 agggagcccggcgatccgtggggaggaaggcgaggatactgatgctgatgatgtcagtga 32085 Query: 370 cttcaactaccctgcatctggcactgaggaccagaagcagaagattgctgataggatgcg 429 || |||||||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 32084 ctacaactaccctgcatctggcagtgccgaccagaagcagaagattgctgataggatgcg 32025 Query: 430 cagctggcgcatgaa 444 ||| ||||||||||| Sbjct: 32024 cagttggcgcatgaa 32010 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 90 gcgccatggacggcgacgcgga 111 |||||||||||||||||||||| Sbjct: 32789 gcgccatggacggcgacgcgga 32768
>dbj|AP003837.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1559_F09 Length = 87792 Score = 222 bits (112), Expect = 8e-55 Identities = 172/192 (89%) Strand = Plus / Minus Query: 118 gaagtccgggaggcacggggccggggacgtgtgccagatctgcgccgacagcctgggcac 177 |||||| |||||||||||| |||| | | |||||||||||||| |||| || ||||||| Sbjct: 64857 gaagtcggggaggcacgggagcgggcaggcgtgccagatctgcggcgacggcgtgggcac 64798 Query: 178 cacggtggacggcgaggtcttcgccgcctgcgacgtctgccgcttcccggtctgccgccc 237 |||| ||| ||||| || ||||||||||||||||||||| |||||||||| |||||||| Sbjct: 64797 gacggcggagggcgacgtgttcgccgcctgcgacgtctgcggcttcccggtgtgccgccc 64738 Query: 238 ctgctacgagcacgagcgcaaggagggcacccaggcctgcctccagtgcaagaccaagta 297 |||||||||| ||||||||||||| ||||||||||| |||| |||||||||||||||||| Sbjct: 64737 ctgctacgagtacgagcgcaaggatggcacccaggcttgcccccagtgcaagaccaagta 64678 Query: 298 caagcgccacaa 309 |||||||||||| Sbjct: 64677 caagcgccacaa 64666 Score = 180 bits (91), Expect = 3e-42 Identities = 124/135 (91%) Strand = Plus / Minus Query: 310 agggagcccagcgatccgcggggaggaaggcgacgacactgatgccgatgatggcagtga 369 ||||||||| |||||||| |||||||||||||| || |||||||| ||||||| |||||| Sbjct: 64370 agggagcccggcgatccgtggggaggaaggcgaggatactgatgctgatgatgtcagtga 64311 Query: 370 cttcaactaccctgcatctggcactgaggaccagaagcagaagattgctgataggatgcg 429 || |||||||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 64310 ctacaactaccctgcatctggcagtgccgaccagaagcagaagattgctgataggatgcg 64251 Query: 430 cagctggcgcatgaa 444 ||| ||||||||||| Sbjct: 64250 cagttggcgcatgaa 64236 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 90 gcgccatggacggcgacgcgga 111 |||||||||||||||||||||| Sbjct: 65015 gcgccatggacggcgacgcgga 64994
>gb|AF200529.1|AF200529 Zea mays cellulose synthase-5 (CesA-5) mRNA, complete cds Length = 3676 Score = 206 bits (104), Expect = 5e-50 Identities = 199/230 (86%), Gaps = 3/230 (1%) Strand = Plus / Plus Query: 90 gcgccatggacggcgacgcggacgccctgaagtccgggaggcacggggccggggacgtgt 149 ||||||||||||||| | |||||| ||| || |||| ||| | ||||||| | |||| Sbjct: 249 gcgccatggacggcggc---gacgccacgaattcggggaagcatgtggccgggcaggtgt 305 Query: 150 gccagatctgcgccgacagcctgggcaccacggtggacggcgaggtcttcgccgcctgcg 209 |||||||||||| |||| || |||||||| ||| ||||||||| ||||| ||||||||| Sbjct: 306 gccagatctgcggcgacggcgtgggcaccgcggcggacggcgacctcttcaccgcctgcg 365 Query: 210 acgtctgccgcttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcaccc 269 |||||||| ||||||| || |||||||| ||||||||| ||||||||||||| ||||||| Sbjct: 366 acgtctgcggcttccccgtgtgccgcccatgctacgagtacgagcgcaaggacggcaccc 425 Query: 270 aggcctgcctccagtgcaagaccaagtacaagcgccacaaagggagccca 319 |||| |||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 426 aggcgtgcccgcagtgcaagactaagtacaagcgccacaaagggagccca 475 Score = 48.1 bits (24), Expect = 0.026 Identities = 48/56 (85%) Strand = Plus / Plus Query: 365 agtgacttcaactaccctgcatctggcactgaggaccagaagcagaagattgctga 420 ||||||| |||||||| |||||||||| |||| |||||||| ||||||||||| Sbjct: 521 agtgactacaactaccaagcatctggcaaccaggatcagaagcaaaagattgctga 576
>gb|AY110079.1| Zea mays CL1164_1 mRNA sequence Length = 3696 Score = 206 bits (104), Expect = 5e-50 Identities = 199/230 (86%), Gaps = 3/230 (1%) Strand = Plus / Plus Query: 90 gcgccatggacggcgacgcggacgccctgaagtccgggaggcacggggccggggacgtgt 149 ||||||||||||||| | |||||| ||| || |||| ||| | ||||||| | |||| Sbjct: 249 gcgccatggacggcggc---gacgccacgaattcggggaagcatgtggccgggcaggtgt 305 Query: 150 gccagatctgcgccgacagcctgggcaccacggtggacggcgaggtcttcgccgcctgcg 209 |||||||||||| |||| || |||||||| ||| ||||||||| ||||| ||||||||| Sbjct: 306 gccagatctgcggcgacggcgtgggcaccgcggcggacggcgacctcttcaccgcctgcg 365 Query: 210 acgtctgccgcttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcaccc 269 |||||||| ||||||| || |||||||| ||||||||| ||||||||||||| ||||||| Sbjct: 366 acgtctgcggcttccccgtgtgccgcccatgctacgagtacgagcgcaaggacggcaccc 425 Query: 270 aggcctgcctccagtgcaagaccaagtacaagcgccacaaagggagccca 319 |||| |||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 426 aggcgtgcccgcagtgcaagactaagtacaagcgccacaaagggagccca 475 Score = 48.1 bits (24), Expect = 0.026 Identities = 48/56 (85%) Strand = Plus / Plus Query: 365 agtgacttcaactaccctgcatctggcactgaggaccagaagcagaagattgctga 420 ||||||| |||||||| |||||||||| |||| |||||||| ||||||||||| Sbjct: 521 agtgactacaactaccaagcatctggcaaccaggatcagaagcaaaagattgctga 576
>gb|AY483151.1| Hordeum vulgare putative cellulose synthase catalytic subunit (CesA3) mRNA, partial cds Length = 3362 Score = 202 bits (102), Expect = 7e-49 Identities = 156/174 (89%) Strand = Plus / Plus Query: 146 gtgtgccagatctgcgccgacagcctgggcaccacggtggacggcgaggtcttcgccgcc 205 |||||||||||||||| |||| || ||||| | ||| | |||||||| ||||||||||| Sbjct: 10 gtgtgccagatctgcggcgacggcgtgggcgcggcggcgaacggcgagctcttcgccgcc 69 Query: 206 tgcgacgtctgccgcttcccggtctgccgcccctgctacgagcacgagcgcaaggagggc 265 |||||||||||| |||||| |||||||| |||||||||||| ||||||||||||||||| Sbjct: 70 tgcgacgtctgcgccttccccgtctgccggccctgctacgagtacgagcgcaaggagggc 129 Query: 266 acccaggcctgcctccagtgcaagaccaagtacaagcgccacaaagggagccca 319 ||||||||||||| ||||||||||||||||||||||||||||| || |||||| Sbjct: 130 acccaggcctgcccgcagtgcaagaccaagtacaagcgccacaagggtagccca 183
>ref|XM_470040.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3607 Score = 192 bits (97), Expect = 7e-46 Identities = 247/297 (83%) Strand = Plus / Plus Query: 149 tgccagatctgcgccgacagcctgggcaccacggtggacggcgaggtcttcgccgcctgc 208 ||||||||||||| |||| || ||||||| ||| |||||||||| ||||| |||||||| Sbjct: 422 tgccagatctgcggcgacggcgtgggcacggcggcggacggcgagctcttcaccgcctgc 481 Query: 209 gacgtctgccgcttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcacc 268 ||||||||| | |||||||| ||||| || ||||||||| ||||||||||||| |||| | Sbjct: 482 gacgtctgcgggttcccggtgtgccggccatgctacgagtacgagcgcaaggacggcagc 541 Query: 269 caggcctgcctccagtgcaagaccaagtacaagcgccacaaagggagcccagcgatccgc 328 ||||| |||| ||||||||||||||||||||||||||||| |||||||| |||| | Sbjct: 542 caggcgtgcccgcagtgcaagaccaagtacaagcgccacaaggggagcccgccgatactt 601 Query: 329 ggggaggaaggcgacgacactgatgccgatgatggcagtgacttcaactaccctgcatct 388 ||||| ||| |||| || |||||| ||||||| ||||| | ||||| || |||| Sbjct: 602 ggggatgaaagcgatgatgttgatgcggatgatgctagtgatgtgaactatccaacatcc 661 Query: 389 ggcactgaggaccagaagcagaagattgctgataggatgcgcagctggcgcatgaac 445 |||| ||||||| ||||| |||||||| || ||||||| || ||||||||||||| Sbjct: 662 ggcaaccaggaccataagcacaagattgccgagaggatgctcacctggcgcatgaac 718
>dbj|AK069196.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003G18, full insert sequence Length = 4282 Score = 192 bits (97), Expect = 7e-46 Identities = 247/297 (83%) Strand = Plus / Plus Query: 149 tgccagatctgcgccgacagcctgggcaccacggtggacggcgaggtcttcgccgcctgc 208 ||||||||||||| |||| || ||||||| ||| |||||||||| ||||| |||||||| Sbjct: 311 tgccagatctgcggcgacggcgtgggcacggcggcggacggcgagctcttcaccgcctgc 370 Query: 209 gacgtctgccgcttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcacc 268 ||||||||| | |||||||| ||||| || ||||||||| ||||||||||||| |||| | Sbjct: 371 gacgtctgcgggttcccggtgtgccggccatgctacgagtacgagcgcaaggacggcagc 430 Query: 269 caggcctgcctccagtgcaagaccaagtacaagcgccacaaagggagcccagcgatccgc 328 ||||| |||| ||||||||||||||||||||||||||||| |||||||| |||| | Sbjct: 431 caggcgtgcccgcagtgcaagaccaagtacaagcgccacaaggggagcccgccgatactt 490 Query: 329 ggggaggaaggcgacgacactgatgccgatgatggcagtgacttcaactaccctgcatct 388 ||||| ||| |||| || |||||| ||||||| ||||| | ||||| || |||| Sbjct: 491 ggggatgaaagcgatgatgttgatgcggatgatgctagtgatgtgaactatccaacatcc 550 Query: 389 ggcactgaggaccagaagcagaagattgctgataggatgcgcagctggcgcatgaac 445 |||| ||||||| ||||| |||||||| || ||||||| || ||||||||||||| Sbjct: 551 ggcaaccaggaccataagcacaagattgccgagaggatgctcacctggcgcatgaac 607
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 168 bits (85), Expect = 1e-38 Identities = 142/161 (88%) Strand = Plus / Minus Query: 149 tgccagatctgcgccgacagcctgggcaccacggtggacggcgaggtcttcgccgcctgc 208 ||||||||||||| |||| || ||||||| ||| |||||||||| ||||| |||||||| Sbjct: 33481894 tgccagatctgcggcgacggcgtgggcacggcggcggacggcgagctcttcaccgcctgc 33481835 Query: 209 gacgtctgccgcttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcacc 268 ||||||||| | |||||||| ||||| || ||||||||| ||||||||||||| |||| | Sbjct: 33481834 gacgtctgcgggttcccggtgtgccggccatgctacgagtacgagcgcaaggacggcagc 33481775 Query: 269 caggcctgcctccagtgcaagaccaagtacaagcgccacaa 309 ||||| |||| ||||||||||||||||||||||||||||| Sbjct: 33481774 caggcgtgcccgcagtgcaagaccaagtacaagcgccacaa 33481734 Score = 63.9 bits (32), Expect = 4e-07 Identities = 89/108 (82%) Strand = Plus / Plus Query: 185 gacggcgaggtcttcgccgcctgcgacgtctgccgcttcccggtctgccgcccctgctac 244 ||||||||| ||||| ||||||| ||| ||| |||||| ||||||||| ||||||| Sbjct: 34874283 gacggcgagcccttcgtcgcctgcaacgagtgcgccttccccgtctgccgcgactgctac 34874342 Query: 245 gagcacgagcgcaaggagggcacccaggcctgcctccagtgcaagacc 292 ||| |||||||| |||||||| ||| ||||| ||||||||||||| Sbjct: 34874343 gagtacgagcgccgcgagggcacgcagaactgcccccagtgcaagacc 34874390 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 396 aggaccagaagcagaagattgctgataggatgcgcagctggcgcatgaac 445 ||||||| ||||| |||||||| || ||||||| || ||||||||||||| Sbjct: 33481315 aggaccataagcacaagattgccgagaggatgctcacctggcgcatgaac 33481266 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 cccctccccctccgcgctcc 25 |||||||||||||||||||| Sbjct: 14593095 cccctccccctccgcgctcc 14593076
>gb|AC145384.2| Oryza sativa chromosome 3 BAC OSJNBa0060M17 genomic sequence, complete sequence Length = 41693 Score = 168 bits (85), Expect = 1e-38 Identities = 142/161 (88%) Strand = Plus / Minus Query: 149 tgccagatctgcgccgacagcctgggcaccacggtggacggcgaggtcttcgccgcctgc 208 ||||||||||||| |||| || ||||||| ||| |||||||||| ||||| |||||||| Sbjct: 11121 tgccagatctgcggcgacggcgtgggcacggcggcggacggcgagctcttcaccgcctgc 11062 Query: 209 gacgtctgccgcttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcacc 268 ||||||||| | |||||||| ||||| || ||||||||| ||||||||||||| |||| | Sbjct: 11061 gacgtctgcgggttcccggtgtgccggccatgctacgagtacgagcgcaaggacggcagc 11002 Query: 269 caggcctgcctccagtgcaagaccaagtacaagcgccacaa 309 ||||| |||| ||||||||||||||||||||||||||||| Sbjct: 11001 caggcgtgcccgcagtgcaagaccaagtacaagcgccacaa 10961 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 396 aggaccagaagcagaagattgctgataggatgcgcagctggcgcatgaac 445 ||||||| ||||| |||||||| || ||||||| || ||||||||||||| Sbjct: 10542 aggaccataagcacaagattgccgagaggatgctcacctggcgcatgaac 10493
>gb|AC135958.2| Oryza sativa chromosome 3 BAC OSJNBa0059E14 genomic sequence, complete sequence Length = 154555 Score = 168 bits (85), Expect = 1e-38 Identities = 142/161 (88%) Strand = Plus / Plus Query: 149 tgccagatctgcgccgacagcctgggcaccacggtggacggcgaggtcttcgccgcctgc 208 ||||||||||||| |||| || ||||||| ||| |||||||||| ||||| |||||||| Sbjct: 16217 tgccagatctgcggcgacggcgtgggcacggcggcggacggcgagctcttcaccgcctgc 16276 Query: 209 gacgtctgccgcttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcacc 268 ||||||||| | |||||||| ||||| || ||||||||| ||||||||||||| |||| | Sbjct: 16277 gacgtctgcgggttcccggtgtgccggccatgctacgagtacgagcgcaaggacggcagc 16336 Query: 269 caggcctgcctccagtgcaagaccaagtacaagcgccacaa 309 ||||| |||| ||||||||||||||||||||||||||||| Sbjct: 16337 caggcgtgcccgcagtgcaagaccaagtacaagcgccacaa 16377 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 396 aggaccagaagcagaagattgctgataggatgcgcagctggcgcatgaac 445 ||||||| ||||| |||||||| || ||||||| || ||||||||||||| Sbjct: 16796 aggaccataagcacaagattgccgagaggatgctcacctggcgcatgaac 16845
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 168 bits (85), Expect = 1e-38 Identities = 142/161 (88%) Strand = Plus / Minus Query: 149 tgccagatctgcgccgacagcctgggcaccacggtggacggcgaggtcttcgccgcctgc 208 ||||||||||||| |||| || ||||||| ||| |||||||||| ||||| |||||||| Sbjct: 33572404 tgccagatctgcggcgacggcgtgggcacggcggcggacggcgagctcttcaccgcctgc 33572345 Query: 209 gacgtctgccgcttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcacc 268 ||||||||| | |||||||| ||||| || ||||||||| ||||||||||||| |||| | Sbjct: 33572344 gacgtctgcgggttcccggtgtgccggccatgctacgagtacgagcgcaaggacggcagc 33572285 Query: 269 caggcctgcctccagtgcaagaccaagtacaagcgccacaa 309 ||||| |||| ||||||||||||||||||||||||||||| Sbjct: 33572284 caggcgtgcccgcagtgcaagaccaagtacaagcgccacaa 33572244 Score = 63.9 bits (32), Expect = 4e-07 Identities = 89/108 (82%) Strand = Plus / Plus Query: 185 gacggcgaggtcttcgccgcctgcgacgtctgccgcttcccggtctgccgcccctgctac 244 ||||||||| ||||| ||||||| ||| ||| |||||| ||||||||| ||||||| Sbjct: 34964355 gacggcgagcccttcgtcgcctgcaacgagtgcgccttccccgtctgccgcgactgctac 34964414 Query: 245 gagcacgagcgcaaggagggcacccaggcctgcctccagtgcaagacc 292 ||| |||||||| |||||||| ||| ||||| ||||||||||||| Sbjct: 34964415 gagtacgagcgccgcgagggcacgcagaactgcccccagtgcaagacc 34964462 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 396 aggaccagaagcagaagattgctgataggatgcgcagctggcgcatgaac 445 ||||||| ||||| |||||||| || ||||||| || ||||||||||||| Sbjct: 33571825 aggaccataagcacaagattgccgagaggatgctcacctggcgcatgaac 33571776 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 cccctccccctccgcgctcc 25 |||||||||||||||||||| Sbjct: 14588070 cccctccccctccgcgctcc 14588051
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 139 bits (70), Expect = 9e-30 Identities = 97/106 (91%) Strand = Plus / Plus Query: 207 gcgacgtctgccgcttcccggtctgccgcccctgctacgagcacgagcgcaaggagggca 266 ||||||||||| |||||||||| |||||||||||||| ||| ||||||| ||||| ||| Sbjct: 288468 gcgacgtctgcggcttcccggtgtgccgcccctgctatgagtacgagcgaaaggatggcg 288527 Query: 267 cccaggcctgcctccagtgcaagaccaagtacaagcgccacaaagg 312 ||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 288528 cccaggcttgcccccagtgcaagaccaagtacaagcgccacaaagg 288573
>dbj|AP002863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0005A05 Length = 190834 Score = 139 bits (70), Expect = 9e-30 Identities = 97/106 (91%) Strand = Plus / Plus Query: 207 gcgacgtctgccgcttcccggtctgccgcccctgctacgagcacgagcgcaaggagggca 266 ||||||||||| |||||||||| |||||||||||||| ||| ||||||| ||||| ||| Sbjct: 40306 gcgacgtctgcggcttcccggtgtgccgcccctgctatgagtacgagcgaaaggatggcg 40365 Query: 267 cccaggcctgcctccagtgcaagaccaagtacaagcgccacaaagg 312 ||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 40366 cccaggcttgcccccagtgcaagaccaagtacaagcgccacaaagg 40411
>dbj|AP002818.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0436E04 Length = 144644 Score = 139 bits (70), Expect = 9e-30 Identities = 97/106 (91%) Strand = Plus / Plus Query: 207 gcgacgtctgccgcttcccggtctgccgcccctgctacgagcacgagcgcaaggagggca 266 ||||||||||| |||||||||| |||||||||||||| ||| ||||||| ||||| ||| Sbjct: 130138 gcgacgtctgcggcttcccggtgtgccgcccctgctatgagtacgagcgaaaggatggcg 130197 Query: 267 cccaggcctgcctccagtgcaagaccaagtacaagcgccacaaagg 312 ||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 130198 cccaggcttgcccccagtgcaagaccaagtacaagcgccacaaagg 130243
>dbj|AK106913.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-A09, full insert sequence Length = 1950 Score = 137 bits (69), Expect = 4e-29 Identities = 96/105 (91%) Strand = Plus / Plus Query: 207 gcgacgtctgccgcttcccggtctgccgcccctgctacgagcacgagcgcaaggagggca 266 ||||||||||| |||||||||| |||||||||||||| ||| ||||||| ||||| ||| Sbjct: 909 gcgacgtctgcggcttcccggtgtgccgcccctgctatgagtacgagcgaaaggatggcg 968 Query: 267 cccaggcctgcctccagtgcaagaccaagtacaagcgccacaaag 311 ||||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 969 cccaggcttgcccccagtgcaagaccaagtacaagcgccacaaag 1013
>dbj|AK121170.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023081B08, full insert sequence Length = 3631 Score = 107 bits (54), Expect = 3e-20 Identities = 114/134 (85%) Strand = Plus / Plus Query: 185 gacggcgaggtcttcgccgcctgcgacgtctgccgcttcccggtctgccgcccctgctac 244 |||||||| |||||| ||||||| ||| ||| |||||||||| ||||||||||||||| Sbjct: 240 gacggcgacctcttcgtcgcctgcaacgagtgcggcttcccggtgtgccgcccctgctac 299 Query: 245 gagcacgagcgcaaggagggcacccaggcctgcctccagtgcaagaccaagtacaagcgc 304 ||| |||||||| |||||||||||| ||||| ||||||||||||| ||||||||| Sbjct: 300 gagtacgagcgccgcgagggcacccagaactgcccccagtgcaagacccgctacaagcgc 359 Query: 305 cacaaagggagccc 318 | ||| |||||||| Sbjct: 360 ctcaaggggagccc 373
>gb|AY372246.1| Zea mays cellulose synthase catalytic subunit 12 (CesA12) mRNA, complete cds Length = 3443 Score = 97.6 bits (49), Expect = 3e-17 Identities = 118/141 (83%) Strand = Plus / Plus Query: 178 cacggtggacggcgaggtcttcgccgcctgcgacgtctgccgcttcccggtctgccgccc 237 ||||||||||||||| |||||| ||||||| ||| ||| ||||||| || ||||| || Sbjct: 229 cacggtggacggcgacctcttcgtcgcctgcaacgagtgcggcttccccgtgtgccggcc 288 Query: 238 ctgctacgagcacgagcgcaaggagggcacccaggcctgcctccagtgcaagaccaagta 297 |||||||||| |||||||| ||||||||| ||| ||||| |||||||||||| || Sbjct: 289 ctgctacgagtacgagcgccgggagggcacgcagaactgcccccagtgcaagacgcgcta 348 Query: 298 caagcgccacaaagggagccc 318 |||||||| ||| |||||||| Sbjct: 349 caagcgcctcaaggggagccc 369
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 97.6 bits (49), Expect = 3e-17 Identities = 103/121 (85%) Strand = Plus / Plus Query: 185 gacggcgaggtcttcgccgcctgcgacgtctgccgcttcccggtctgccgcccctgctac 244 |||||||| |||||| ||||||| ||| ||| |||||||||| ||||||||||||||| Sbjct: 15226906 gacggcgacctcttcgtcgcctgcaacgagtgcggcttcccggtgtgccgcccctgctac 15226965 Query: 245 gagcacgagcgcaaggagggcacccaggcctgcctccagtgcaagaccaagtacaagcgc 304 ||| |||||||| |||||||||||| ||||| ||||||||||||| ||||||||| Sbjct: 15226966 gagtacgagcgccgcgagggcacccagaactgcccccagtgcaagacccgctacaagcgc 15227025 Query: 305 c 305 | Sbjct: 15227026 c 15227026
>dbj|AP005579.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1740_D06 Length = 187410 Score = 97.6 bits (49), Expect = 3e-17 Identities = 103/121 (85%) Strand = Plus / Plus Query: 185 gacggcgaggtcttcgccgcctgcgacgtctgccgcttcccggtctgccgcccctgctac 244 |||||||| |||||| ||||||| ||| ||| |||||||||| ||||||||||||||| Sbjct: 120882 gacggcgacctcttcgtcgcctgcaacgagtgcggcttcccggtgtgccgcccctgctac 120941 Query: 245 gagcacgagcgcaaggagggcacccaggcctgcctccagtgcaagaccaagtacaagcgc 304 ||| |||||||| |||||||||||| ||||| ||||||||||||| ||||||||| Sbjct: 120942 gagtacgagcgccgcgagggcacccagaactgcccccagtgcaagacccgctacaagcgc 121001 Query: 305 c 305 | Sbjct: 121002 c 121002
>dbj|AP005420.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0418B08 Length = 165909 Score = 97.6 bits (49), Expect = 3e-17 Identities = 103/121 (85%) Strand = Plus / Plus Query: 185 gacggcgaggtcttcgccgcctgcgacgtctgccgcttcccggtctgccgcccctgctac 244 |||||||| |||||| ||||||| ||| ||| |||||||||| ||||||||||||||| Sbjct: 6095 gacggcgacctcttcgtcgcctgcaacgagtgcggcttcccggtgtgccgcccctgctac 6154 Query: 245 gagcacgagcgcaaggagggcacccaggcctgcctccagtgcaagaccaagtacaagcgc 304 ||| |||||||| |||||||||||| ||||| ||||||||||||| ||||||||| Sbjct: 6155 gagtacgagcgccgcgagggcacccagaactgcccccagtgcaagacccgctacaagcgc 6214 Query: 305 c 305 | Sbjct: 6215 c 6215
>dbj|AK102140.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033085K01, full insert sequence Length = 3768 Score = 85.7 bits (43), Expect = 1e-13 Identities = 85/99 (85%) Strand = Plus / Plus Query: 220 cttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcacccaggcctgcct 279 |||||||||||||||||| ||||||||| ||||||||||||| || | |||| ||||| Sbjct: 378 cttcccggtctgccgcccttgctacgagtacgagcgcaaggaagggaaccagtgctgccc 437 Query: 280 ccagtgcaagaccaagtacaagcgccacaaagggagccc 318 |||||||||||| | |||||| | |||||||| ||||| Sbjct: 438 ccagtgcaagactagatacaagaggcacaaaggtagccc 476
>dbj|AK100188.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023034D20, full insert sequence Length = 3897 Score = 85.7 bits (43), Expect = 1e-13 Identities = 85/99 (85%) Strand = Plus / Plus Query: 220 cttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcacccaggcctgcct 279 |||||||||||||||||| ||||||||| ||||||||||||| || | |||| ||||| Sbjct: 378 cttcccggtctgccgcccttgctacgagtacgagcgcaaggaagggaaccagtgctgccc 437 Query: 280 ccagtgcaagaccaagtacaagcgccacaaagggagccc 318 |||||||||||| | |||||| | |||||||| ||||| Sbjct: 438 ccagtgcaagactagatacaagaggcacaaaggtagccc 476
>dbj|AK099281.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023125F05, full insert sequence Length = 3801 Score = 85.7 bits (43), Expect = 1e-13 Identities = 85/99 (85%) Strand = Plus / Plus Query: 220 cttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcacccaggcctgcct 279 |||||||||||||||||| ||||||||| ||||||||||||| || | |||| ||||| Sbjct: 378 cttcccggtctgccgcccttgctacgagtacgagcgcaaggaagggaaccagtgctgccc 437 Query: 280 ccagtgcaagaccaagtacaagcgccacaaagggagccc 318 |||||||||||| | |||||| | |||||||| ||||| Sbjct: 438 ccagtgcaagactagatacaagaggcacaaaggtagccc 476
>dbj|AK099228.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091P03, full insert sequence Length = 3732 Score = 85.7 bits (43), Expect = 1e-13 Identities = 85/99 (85%) Strand = Plus / Plus Query: 220 cttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcacccaggcctgcct 279 |||||||||||||||||| ||||||||| ||||||||||||| || | |||| ||||| Sbjct: 378 cttcccggtctgccgcccttgctacgagtacgagcgcaaggaagggaaccagtgctgccc 437 Query: 280 ccagtgcaagaccaagtacaagcgccacaaagggagccc 318 |||||||||||| | |||||| | |||||||| ||||| Sbjct: 438 ccagtgcaagactagatacaagaggcacaaaggtagccc 476
>dbj|AK098978.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092B06, full insert sequence Length = 3764 Score = 85.7 bits (43), Expect = 1e-13 Identities = 85/99 (85%) Strand = Plus / Plus Query: 220 cttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcacccaggcctgcct 279 |||||||||||||||||| ||||||||| ||||||||||||| || | |||| ||||| Sbjct: 378 cttcccggtctgccgcccttgctacgagtacgagcgcaaggaagggaaccagtgctgccc 437 Query: 280 ccagtgcaagaccaagtacaagcgccacaaagggagccc 318 |||||||||||| | |||||| | |||||||| ||||| Sbjct: 438 ccagtgcaagactagatacaagaggcacaaaggtagccc 476
>dbj|AK067967.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013125H24, full insert sequence Length = 3802 Score = 85.7 bits (43), Expect = 1e-13 Identities = 85/99 (85%) Strand = Plus / Plus Query: 220 cttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcacccaggcctgcct 279 |||||||||||||||||| ||||||||| ||||||||||||| || | |||| ||||| Sbjct: 378 cttcccggtctgccgcccttgctacgagtacgagcgcaaggaagggaaccagtgctgccc 437 Query: 280 ccagtgcaagaccaagtacaagcgccacaaagggagccc 318 |||||||||||| | |||||| | |||||||| ||||| Sbjct: 438 ccagtgcaagactagatacaagaggcacaaaggtagccc 476
>dbj|AK067850.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123A09, full insert sequence Length = 1444 Score = 85.7 bits (43), Expect = 1e-13 Identities = 85/99 (85%) Strand = Plus / Plus Query: 220 cttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcacccaggcctgcct 279 |||||||||||||||||| ||||||||| ||||||||||||| || | |||| ||||| Sbjct: 381 cttcccggtctgccgcccttgctacgagtacgagcgcaaggaagggaaccagtgctgccc 440 Query: 280 ccagtgcaagaccaagtacaagcgccacaaagggagccc 318 |||||||||||| | |||||| | |||||||| ||||| Sbjct: 441 ccagtgcaagactagatacaagaggcacaaaggtagccc 479
>gb|AF030052.1|AF030052 Oryza sativa subsp. japonica RSW1-like cellulose synthase catalytic subunit mRNA, partial cds Length = 1838 Score = 85.7 bits (43), Expect = 1e-13 Identities = 85/99 (85%) Strand = Plus / Plus Query: 220 cttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcacccaggcctgcct 279 |||||||||||||||||| ||||||||| ||||||||||||| || | |||| ||||| Sbjct: 281 cttcccggtctgccgcccttgctacgagtacgagcgcaaggaagggaaccagtgctgccc 340 Query: 280 ccagtgcaagaccaagtacaagcgccacaaagggagccc 318 |||||||||||| | |||||| | |||||||| ||||| Sbjct: 341 ccagtgcaagactagatacaagaggcacaaaggtagccc 379
>ref|NM_196933.1| Oryza sativa (japonica cultivar-group) putative cellulose synthase (OSJNBa0006L06.10), mRNA Length = 3408 Score = 81.8 bits (41), Expect = 2e-12 Identities = 86/101 (85%) Strand = Plus / Plus Query: 219 gcttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcacccaggcctgcc 278 |||||||||| ||| |||||||||||| ||||||||| |||||||||||| ||||| Sbjct: 122 gcttcccggtgtgcaagccctgctacgagtacgagcgcagcgagggcacccagtgctgcc 181 Query: 279 tccagtgcaagaccaagtacaagcgccacaaagggagccca 319 ||||||||| ||| |||||||||||||||||| ||||| Sbjct: 182 cccagtgcaacacccgctacaagcgccacaaagggtgccca 222
>gb|AC135426.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0617A08, complete sequence Length = 144781 Score = 81.8 bits (41), Expect = 2e-12 Identities = 80/93 (86%) Strand = Plus / Minus Query: 220 cttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcacccaggcctgcct 279 |||||||||||||||||| ||||||||| ||||||||||||| || | |||| ||||| Sbjct: 132977 cttcccggtctgccgcccttgctacgagtacgagcgcaaggaagggaaccagtgctgccc 132918 Query: 280 ccagtgcaagaccaagtacaagcgccacaaagg 312 |||||||||||| | |||||| | |||||||| Sbjct: 132917 ccagtgcaagactagatacaagaggcacaaagg 132885
>gb|AC144738.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0029B02, complete sequence Length = 156649 Score = 81.8 bits (41), Expect = 2e-12 Identities = 80/93 (86%) Strand = Plus / Minus Query: 220 cttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcacccaggcctgcct 279 |||||||||||||||||| ||||||||| ||||||||||||| || | |||| ||||| Sbjct: 21820 cttcccggtctgccgcccttgctacgagtacgagcgcaaggaagggaaccagtgctgccc 21761 Query: 280 ccagtgcaagaccaagtacaagcgccacaaagg 312 |||||||||||| | |||||| | |||||||| Sbjct: 21760 ccagtgcaagactagatacaagaggcacaaagg 21728
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 81.8 bits (41), Expect = 2e-12 Identities = 80/93 (86%) Strand = Plus / Minus Query: 220 cttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcacccaggcctgcct 279 |||||||||||||||||| ||||||||| ||||||||||||| || | |||| ||||| Sbjct: 4511353 cttcccggtctgccgcccttgctacgagtacgagcgcaaggaagggaaccagtgctgccc 4511294 Query: 280 ccagtgcaagaccaagtacaagcgccacaaagg 312 |||||||||||| | |||||| | |||||||| Sbjct: 4511293 ccagtgcaagactagatacaagaggcacaaagg 4511261
>dbj|AK072259.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023009D02, full insert sequence Length = 3426 Score = 81.8 bits (41), Expect = 2e-12 Identities = 86/101 (85%) Strand = Plus / Plus Query: 219 gcttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcacccaggcctgcc 278 |||||||||| ||| |||||||||||| ||||||||| |||||||||||| ||||| Sbjct: 155 gcttcccggtgtgcaagccctgctacgagtacgagcgcagcgagggcacccagtgctgcc 214 Query: 279 tccagtgcaagaccaagtacaagcgccacaaagggagccca 319 ||||||||| ||| |||||||||||||||||| ||||| Sbjct: 215 cccagtgcaacacccgctacaagcgccacaaagggtgccca 255
>gb|AC022457.8| Oryza sativa chromosome 10 BAC OSJNBa0006L06 genomic sequence, complete sequence Length = 162339 Score = 75.8 bits (38), Expect = 1e-10 Identities = 80/94 (85%) Strand = Plus / Plus Query: 219 gcttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcacccaggcctgcc 278 |||||||||| ||| |||||||||||| ||||||||| |||||||||||| ||||| Sbjct: 91755 gcttcccggtgtgcaagccctgctacgagtacgagcgcagcgagggcacccagtgctgcc 91814 Query: 279 tccagtgcaagaccaagtacaagcgccacaaagg 312 ||||||||| ||| ||||||||||||||||| Sbjct: 91815 cccagtgcaacacccgctacaagcgccacaaagg 91848
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 75.8 bits (38), Expect = 1e-10 Identities = 80/94 (85%) Strand = Plus / Plus Query: 219 gcttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcacccaggcctgcc 278 |||||||||| ||| |||||||||||| ||||||||| |||||||||||| ||||| Sbjct: 16747238 gcttcccggtgtgcaagccctgctacgagtacgagcgcagcgagggcacccagtgctgcc 16747297 Query: 279 tccagtgcaagaccaagtacaagcgccacaaagg 312 ||||||||| ||| ||||||||||||||||| Sbjct: 16747298 cccagtgcaacacccgctacaagcgccacaaagg 16747331
>gb|DQ014506.1| Eucalyptus grandis cellulose synthase 2 (CesA2) mRNA, complete cds Length = 3471 Score = 75.8 bits (38), Expect = 1e-10 Identities = 101/122 (82%) Strand = Plus / Plus Query: 197 ttcgccgcctgcgacgtctgccgcttcccggtctgccgcccctgctacgagcacgagcgc 256 |||| ||||||| ||| ||| ||||||| ||||||||||||||||||| |||||||| Sbjct: 250 ttcgtcgcctgccacgagtgcggcttccccgtctgccgcccctgctacgtctacgagcgc 309 Query: 257 aaggagggcacccaggcctgcctccagtgcaagaccaagtacaagcgccacaaagggagc 316 | || ||||||||| ||||| ||||||||| || |||||||||||||||||| || Sbjct: 310 agcgacggcacccagtgctgcccccagtgcaacgcccgctacaagcgccacaaagggtgc 369 Query: 317 cc 318 || Sbjct: 370 cc 371
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 75.8 bits (38), Expect = 1e-10 Identities = 80/94 (85%) Strand = Plus / Plus Query: 219 gcttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcacccaggcctgcc 278 |||||||||| ||| |||||||||||| ||||||||| |||||||||||| ||||| Sbjct: 16756278 gcttcccggtgtgcaagccctgctacgagtacgagcgcagcgagggcacccagtgctgcc 16756337 Query: 279 tccagtgcaagaccaagtacaagcgccacaaagg 312 ||||||||| ||| ||||||||||||||||| Sbjct: 16756338 cccagtgcaacacccgctacaagcgccacaaagg 16756371
>gb|AY372244.1| Zea mays cellulose synthase catalytic subunit 10 (CesA10) mRNA, complete cds Length = 3470 Score = 71.9 bits (36), Expect = 2e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 219 gcttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcacccaggcctgcc 278 ||||||| |||||||| |||||||||||| ||||||||| |||||||| ||| ||||| Sbjct: 219 gcttccccgtctgccggccctgctacgagtacgagcgcagcgagggcacgcagtgctgcc 278 Query: 279 tccagtgcaagaccaagtacaagcgccacaaagggagccc 318 |||||||| ||| ||||||||||| |||||| |||| Sbjct: 279 cgcagtgcaacacccgctacaagcgccagaaagggtgccc 318
>gb|DQ020208.1| Bambusa oldhamii cellulose synthase BoCesA1b mRNA, complete cds Length = 3453 Score = 69.9 bits (35), Expect = 7e-09 Identities = 83/99 (83%) Strand = Plus / Plus Query: 220 cttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcacccaggcctgcct 279 |||||||||||||||||| ||||| ||| ||||||||||||| || | |||| ||||| Sbjct: 365 cttcccggtctgccgcccttgctatgagtacgagcgcaaggaagggaaccagtgctgccc 424 Query: 280 ccagtgcaagaccaagtacaagcgccacaaagggagccc 318 ||||||||||| | |||||| | |||||||| ||||| Sbjct: 425 tcagtgcaagactagatacaagagacacaaaggtagccc 463
>gb|AY483155.1| Hordeum vulgare putative cellulose synthase catalytic subunit (CesA6) mRNA, complete cds Length = 3745 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 220 cttcccggtctgccgcccctgctacgagcacgagcgcaagga 261 |||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 395 cttcccggtctgccgcccttgctacgagtacgagcgcaagga 436
>ref|XM_470347.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3905 Score = 63.9 bits (32), Expect = 4e-07 Identities = 89/108 (82%) Strand = Plus / Plus Query: 185 gacggcgaggtcttcgccgcctgcgacgtctgccgcttcccggtctgccgcccctgctac 244 ||||||||| ||||| ||||||| ||| ||| |||||| ||||||||| ||||||| Sbjct: 151 gacggcgagcccttcgtcgcctgcaacgagtgcgccttccccgtctgccgcgactgctac 210 Query: 245 gagcacgagcgcaaggagggcacccaggcctgcctccagtgcaagacc 292 ||| |||||||| |||||||| ||| ||||| ||||||||||||| Sbjct: 211 gagtacgagcgccgcgagggcacgcagaactgcccccagtgcaagacc 258
>gb|DQ020207.1| Bambusa oldhamii cellulose synthase BoCesA1a mRNA, complete cds Length = 3547 Score = 63.9 bits (32), Expect = 4e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 220 cttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcacccaggcctgcct 279 |||||||||||||||||| ||||| ||| ||||||||||||| || | |||| ||||| Sbjct: 208 cttcccggtctgccgcccttgctatgagtacgagcgcaaggaagggaaccagtgctgccc 267 Query: 280 ccagtgcaagac 291 ||||||||||| Sbjct: 268 tcagtgcaagac 279
>gb|AC104487.3| Oryza sativa chromosome 3 BAC OSJNBa0042I09 genomic sequence, complete sequence Length = 171376 Score = 63.9 bits (32), Expect = 4e-07 Identities = 89/108 (82%) Strand = Plus / Minus Query: 185 gacggcgaggtcttcgccgcctgcgacgtctgccgcttcccggtctgccgcccctgctac 244 ||||||||| ||||| ||||||| ||| ||| |||||| ||||||||| ||||||| Sbjct: 141197 gacggcgagcccttcgtcgcctgcaacgagtgcgccttccccgtctgccgcgactgctac 141138 Query: 245 gagcacgagcgcaaggagggcacccaggcctgcctccagtgcaagacc 292 ||| |||||||| |||||||| ||| ||||| ||||||||||||| Sbjct: 141137 gagtacgagcgccgcgagggcacgcagaactgcccccagtgcaagacc 141090
>dbj|AK100877.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023127C10, full insert sequence Length = 4029 Score = 63.9 bits (32), Expect = 4e-07 Identities = 89/108 (82%) Strand = Plus / Plus Query: 185 gacggcgaggtcttcgccgcctgcgacgtctgccgcttcccggtctgccgcccctgctac 244 ||||||||| ||||| ||||||| ||| ||| |||||| ||||||||| ||||||| Sbjct: 321 gacggcgagcccttcgtcgcctgcaacgagtgcgccttccccgtctgccgcgactgctac 380 Query: 245 gagcacgagcgcaaggagggcacccaggcctgcctccagtgcaagacc 292 ||| |||||||| |||||||| ||| ||||| ||||||||||||| Sbjct: 381 gagtacgagcgccgcgagggcacgcagaactgcccccagtgcaagacc 428
>gb|AY483152.1| Hordeum vulgare putative cellulose synthase catalytic subunit (CesA2) mRNA, complete cds Length = 3907 Score = 60.0 bits (30), Expect = 7e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 220 cttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcacccaggcctgcct 279 |||||| ||||||||| |||||||||| ||||||| |||||||||||| ||||| Sbjct: 260 cttccccgtctgccgcgactgctacgagtacgagcgacgcgagggcacccagaactgccc 319 Query: 280 ccagtgcaagaccaagtacaagcgcc 305 ||||||||||||| |||||||||| Sbjct: 320 acagtgcaagaccagatacaagcgcc 345
>dbj|AP004298.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0409D09 Length = 150485 Score = 58.0 bits (29), Expect = 3e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 220 cttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcacccaggcctgcct 279 ||||||||| |||||| |||||||||| |||||||| |||||||| ||| ||||| Sbjct: 44001 cttcccggtgtgccgcgactgctacgagtacgagcgccgcgagggcacgcagaactgccc 43942 Query: 280 ccagtgcaagacc 292 ||||||||||||| Sbjct: 43941 ccagtgcaagacc 43929
>dbj|AK121193.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086F23, full insert sequence Length = 4127 Score = 58.0 bits (29), Expect = 3e-05 Identities = 62/73 (84%) Strand = Plus / Plus Query: 220 cttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcacccaggcctgcct 279 ||||||||| |||||| |||||||||| |||||||| |||||||| ||| ||||| Sbjct: 441 cttcccggtgtgccgcgactgctacgagtacgagcgccgcgagggcacgcagaactgccc 500 Query: 280 ccagtgcaagacc 292 ||||||||||||| Sbjct: 501 ccagtgcaagacc 513
>dbj|AK120236.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043M21, full insert sequence Length = 2931 Score = 58.0 bits (29), Expect = 3e-05 Identities = 62/73 (84%) Strand = Plus / Plus Query: 220 cttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcacccaggcctgcct 279 ||||||||| |||||| |||||||||| |||||||| |||||||| ||| ||||| Sbjct: 443 cttcccggtgtgccgcgactgctacgagtacgagcgccgcgagggcacgcagaactgccc 502 Query: 280 ccagtgcaagacc 292 ||||||||||||| Sbjct: 503 ccagtgcaagacc 515
>dbj|AK073561.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033042D15, full insert sequence Length = 4208 Score = 58.0 bits (29), Expect = 3e-05 Identities = 62/73 (84%) Strand = Plus / Plus Query: 220 cttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcacccaggcctgcct 279 ||||||||| |||||| |||||||||| |||||||| |||||||| ||| ||||| Sbjct: 522 cttcccggtgtgccgcgactgctacgagtacgagcgccgcgagggcacgcagaactgccc 581 Query: 280 ccagtgcaagacc 292 ||||||||||||| Sbjct: 582 ccagtgcaagacc 594
>gb|AY110415.1| Zea mays CL1166_1 mRNA sequence Length = 3898 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 220 cttcccggtctgccgcccctgctacgagcacgagcgcaaggaggg 264 |||||| ||||||||||| ||||| ||| |||||||||||||||| Sbjct: 380 cttccctgtctgccgcccttgctatgagtacgagcgcaaggaggg 424
>gb|AF200525.1|AF200525 Zea mays cellulose synthase-1 (CesA-1) mRNA, complete cds Length = 3752 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 220 cttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcacccaggcctgcct 279 |||||| ||||||||||| ||||| ||| | |||||||||||||| | ||| ||||| Sbjct: 374 cttccctgtctgccgcccatgctatgagtatgagcgcaaggaggggaaccaatgctgccc 433 Query: 280 ccagtgcaagac 291 |||||||||||| Sbjct: 434 ccagtgcaagac 445
>gb|AF200526.1|AF200526 Zea mays cellulose synthase-2 (CesA-2) mRNA, complete cds Length = 3725 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 220 cttcccggtctgccgcccctgctacgagcacgagcgcaagga 261 |||||| ||||||||||| ||||| ||| ||||||||||||| Sbjct: 370 cttccctgtctgccgcccttgctatgagtacgagcgcaagga 411
>gb|AY103701.1| Zea mays PCO120363 mRNA sequence Length = 3788 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Plus Query: 220 cttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcacccaggcctgcct 279 |||||| ||||||||| ||||||||||| |||||||| |||||| | ||||| |||| Sbjct: 392 cttccccgtctgccgcgcctgctacgagtacgagcgccgcgagggctcgcaggcgtgccc 451 Query: 280 ccagtgcaagaccaagtacaagcgcc 305 ||||||| |||| |||||||||| Sbjct: 452 gcagtgcaggacccgctacaagcgcc 477
>ref|XM_477282.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3746 Score = 50.1 bits (25), Expect = 0.006 Identities = 61/73 (83%) Strand = Plus / Plus Query: 220 cttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcacccaggcctgcct 279 |||||| ||||||||| ||||||||| |||||||| |||||| | ||||| |||| Sbjct: 260 cttccccgtctgccgcaactgctacgactacgagcgccgcgagggctcgcaggcttgccc 319 Query: 280 ccagtgcaagacc 292 ||||||||||||| Sbjct: 320 ccagtgcaagacc 332
>gb|AF200532.1|AF200532 Zea mays cellulose synthase-8 (CesA-8) mRNA, complete cds Length = 3812 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 220 cttcccggtctgccgcccctgctacgagcacgagcgc 256 |||||| ||||||||| ||||||||||| |||||||| Sbjct: 405 cttccccgtctgccgcgcctgctacgagtacgagcgc 441
>dbj|AP005824.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0669H03 Length = 167878 Score = 50.1 bits (25), Expect = 0.006 Identities = 61/73 (83%) Strand = Plus / Plus Query: 220 cttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcacccaggcctgcct 279 |||||| ||||||||| ||||||||| |||||||| |||||| | ||||| |||| Sbjct: 61170 cttccccgtctgccgcaactgctacgactacgagcgccgcgagggctcgcaggcttgccc 61229 Query: 280 ccagtgcaagacc 292 ||||||||||||| Sbjct: 61230 ccagtgcaagacc 61242
>dbj|AK099735.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013090G16, full insert sequence Length = 2064 Score = 50.1 bits (25), Expect = 0.006 Identities = 61/73 (83%) Strand = Plus / Plus Query: 220 cttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcacccaggcctgcct 279 |||||| ||||||||| ||||||||| |||||||| |||||| | ||||| |||| Sbjct: 260 cttccccgtctgccgcaactgctacgactacgagcgccgcgagggctcgcaggcttgccc 319 Query: 280 ccagtgcaagacc 292 ||||||||||||| Sbjct: 320 ccagtgcaagacc 332
>dbj|AK100914.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133D04, full insert sequence Length = 3746 Score = 50.1 bits (25), Expect = 0.006 Identities = 61/73 (83%) Strand = Plus / Plus Query: 220 cttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcacccaggcctgcct 279 |||||| ||||||||| ||||||||| |||||||| |||||| | ||||| |||| Sbjct: 260 cttccccgtctgccgcaactgctacgactacgagcgccgcgagggctcgcaggcttgccc 319 Query: 280 ccagtgcaagacc 292 ||||||||||||| Sbjct: 320 ccagtgcaagacc 332
>gb|AF200531.1|AF200531 Zea mays cellulose synthase-7 (CesA-7) mRNA, complete cds Length = 3968 Score = 48.1 bits (24), Expect = 0.026 Identities = 60/72 (83%) Strand = Plus / Plus Query: 220 cttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcacccaggcctgcct 279 |||||| |||||||| ||||||||| |||||||| ||||||||| ||| ||||| Sbjct: 328 cttccccgtctgccgggactgctacgaatacgagcgccgggagggcacgcagaactgccc 387 Query: 280 ccagtgcaagac 291 |||||||||||| Sbjct: 388 ccagtgcaagac 399
>gb|AY103655.1| Zea mays PCO096398 mRNA sequence Length = 3897 Score = 48.1 bits (24), Expect = 0.026 Identities = 60/72 (83%) Strand = Plus / Plus Query: 220 cttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcacccaggcctgcct 279 |||||| |||||||| ||||||||| |||||||| ||||||||| ||| ||||| Sbjct: 341 cttccccgtctgccgggactgctacgaatacgagcgccgggagggcacgcagaactgccc 400 Query: 280 ccagtgcaagac 291 |||||||||||| Sbjct: 401 ccagtgcaagac 412
>gb|DQ160225.1| Physcomitrella patens cellulose synthase catalytic subunit (CesA7) mRNA, complete cds Length = 4016 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 221 ttcccggtctgccgcccctgctacgag 247 |||||||| |||||||||||||||||| Sbjct: 317 ttcccggtgtgccgcccctgctacgag 343
>gb|DQ160224.1| Physcomitrella patens cellulose synthase catalytic subunit (CesA6) mRNA, complete cds Length = 4070 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 221 ttcccggtctgccgcccctgctacgag 247 |||||||| |||||||||||||||||| Sbjct: 344 ttcccggtgtgccgcccctgctacgag 370
>gb|AF200530.1|AF200530 Zea mays cellulose synthase-6 (CesA-6) mRNA, complete cds Length = 3538 Score = 46.1 bits (23), Expect = 0.10 Identities = 47/55 (85%) Strand = Plus / Plus Query: 238 ctgctacgagcacgagcgcaaggagggcacccaggcctgcctccagtgcaagacc 292 |||||||||| |||||||| |||||||| ||| ||||| ||||||||||||| Sbjct: 156 ctgctacgagtacgagcgccgcgagggcacgcagaactgcccccagtgcaagacc 210
>gb|AY104730.1| Zea mays PCO100501 mRNA sequence Length = 3783 Score = 46.1 bits (23), Expect = 0.10 Identities = 47/55 (85%) Strand = Plus / Plus Query: 238 ctgctacgagcacgagcgcaaggagggcacccaggcctgcctccagtgcaagacc 292 |||||||||| |||||||| |||||||| ||| ||||| ||||||||||||| Sbjct: 389 ctgctacgagtacgagcgccgcgagggcacgcagaactgcccccagtgcaagacc 443
>gb|AC103796.3| Homo sapiens chromosome 11, clone RP11-1033A18, complete sequence Length = 211799 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 392 actgaggaccagaagcagaaga 413 |||||||||||||||||||||| Sbjct: 166122 actgaggaccagaagcagaaga 166143
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 344 gacactgatgccgatgatggcagtga 369 |||||||||||||||| ||||||||| Sbjct: 1060740 gacactgatgccgatgctggcagtga 1060765 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 acggcgaggtcttcgccgcc 205 |||||||||||||||||||| Sbjct: 3744082 acggcgaggtcttcgccgcc 3744063
>gb|AC007326.28| Homo sapiens chromosome 22 clone p423 map 22q11, complete sequence Length = 102898 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 258 aggagggcacccaggcctgcct 279 |||||||||||||||||||||| Sbjct: 81836 aggagggcacccaggcctgcct 81857
>gb|AC000069.2| Homo sapiens Chromosome 22q11.2 Cosmid Clone 103a2 In DGCR Region, complete sequence Length = 39859 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 258 aggagggcacccaggcctgcct 279 |||||||||||||||||||||| Sbjct: 17256 aggagggcacccaggcctgcct 17277
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 37 gggaggagccgctccagctcgg 58 |||||||||||||||||||||| Sbjct: 3786976 gggaggagccgctccagctcgg 3786955
>ref|XM_516181.1| PREDICTED: Pan troglodytes similar to RAB17, member RAS oncogene family (LOC460049), mRNA Length = 2145 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 125 gggaggcacggggccggggac 145 ||||||||||||||||||||| Sbjct: 256 gggaggcacggggccggggac 236
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 cgcgccatggacggcgacgcg 109 ||||||||||||||||||||| Sbjct: 2097739 cgcgccatggacggcgacgcg 2097759
>gb|AC161530.4| Mus musculus chromosome 18, clone RP24-339M16, complete sequence Length = 168512 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 87 gccgcgccatggacggcgacg 107 ||||||||||||||||||||| Sbjct: 4187 gccgcgccatggacggcgacg 4167
>ref|XM_974899.1| PREDICTED: Mus musculus RIKEN cDNA 5730405I09 gene, transcript variant 4 (5730405I09Rik), mRNA Length = 7274 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 87 gccgcgccatggacggcgacg 107 ||||||||||||||||||||| Sbjct: 63 gccgcgccatggacggcgacg 43
>gb|BC035524.1| Mus musculus RIKEN cDNA 5730405I09 gene, mRNA (cDNA clone MGC:40707 IMAGE:4974858), complete cds Length = 2525 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 87 gccgcgccatggacggcgacg 107 ||||||||||||||||||||| Sbjct: 184 gccgcgccatggacggcgacg 164
>gb|BC023321.1| Mus musculus RIKEN cDNA 5730405I09 gene, mRNA (cDNA clone MGC:28252 IMAGE:3995040), complete cds Length = 2104 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 87 gccgcgccatggacggcgacg 107 ||||||||||||||||||||| Sbjct: 323 gccgcgccatggacggcgacg 303
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 194 gtcttcgccgcctgcgacgtc 214 ||||||||||||||||||||| Sbjct: 3933713 gtcttcgccgcctgcgacgtc 3933693
>dbj|AK006341.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:1700025H17 product:RIKEN cDNA 1700025H17 gene, full insert sequence Length = 868 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 87 gccgcgccatggacggcgacg 107 ||||||||||||||||||||| Sbjct: 208 gccgcgccatggacggcgacg 188
>gb|AC158568.6| Mus musculus chromosome 18, clone RP24-249D7, complete sequence Length = 151345 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 gccgcgccatggacggcgacg 107 ||||||||||||||||||||| Sbjct: 59590 gccgcgccatggacggcgacg 59610
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 342 acgacactgatgccgatgatg 362 ||||||||||||||||||||| Sbjct: 2388849 acgacactgatgccgatgatg 2388869
>dbj|AK028696.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732438K01 product:CYCLIN-BOX CARRYING PROTEIN homolog [Homo sapiens], full insert sequence Length = 4018 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 87 gccgcgccatggacggcgacg 107 ||||||||||||||||||||| Sbjct: 355 gccgcgccatggacggcgacg 335
>dbj|AK017493.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730405I09 product:CYCLIN-BOX CARRYING PROTEIN homolog [Homo sapiens], full insert sequence Length = 1947 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 87 gccgcgccatggacggcgacg 107 ||||||||||||||||||||| Sbjct: 187 gccgcgccatggacggcgacg 167
>dbj|AK014201.1| Mus musculus 13 days embryo head cDNA, RIKEN full-length enriched library, clone:3110050L10 product:weakly similar to CYCLIN-BOX CARRYING PROTEIN [Homo sapiens], full insert sequence Length = 1048 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 87 gccgcgccatggacggcgacg 107 ||||||||||||||||||||| Sbjct: 358 gccgcgccatggacggcgacg 338
>gb|AC024361.21| Homo sapiens chromosome 17, clone RP11-388C12, complete sequence Length = 111473 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 259 ggagggcacccaggcctgcct 279 ||||||||||||||||||||| Sbjct: 87802 ggagggcacccaggcctgcct 87782
>gb|AC068014.16| Homo sapiens chromosome 17, clone RP11-567O16, complete sequence Length = 148509 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 259 ggagggcacccaggcctgcct 279 ||||||||||||||||||||| Sbjct: 85817 ggagggcacccaggcctgcct 85837
>gb|AC117540.9| Mus musculus chromosome 18, clone RP23-131B4, complete sequence Length = 198854 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 gccgcgccatggacggcgacg 107 ||||||||||||||||||||| Sbjct: 128830 gccgcgccatggacggcgacg 128850
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 94 catggacggcgacgcggacgccctg 118 |||||||| |||||||||||||||| Sbjct: 524243 catggacgccgacgcggacgccctg 524219
>ref|NM_026484.2| Mus musculus RIKEN cDNA 5730405I09 gene (5730405I09Rik), mRNA Length = 4018 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 87 gccgcgccatggacggcgacg 107 ||||||||||||||||||||| Sbjct: 355 gccgcgccatggacggcgacg 335
>gb|BT017904.1| Zea mays clone EL01N0516E03.c mRNA sequence Length = 1433 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 atctggcactgaggaccaga 404 |||||||||||||||||||| Sbjct: 819 atctggcactgaggaccaga 838
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 333 aggaaggcgacgacactgatgccg 356 |||||||||||||||| ||||||| Sbjct: 3418003 aggaaggcgacgacaccgatgccg 3417980
>emb|BX000981.34| Zebrafish DNA sequence from clone DKEY-9P20 in linkage group 14, complete sequence Length = 236476 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 aggaccagaagcagaagatt 415 |||||||||||||||||||| Sbjct: 99603 aggaccagaagcagaagatt 99622 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 aggaccagaagcagaagatt 415 |||||||||||||||||||| Sbjct: 65152 aggaccagaagcagaagatt 65133
>emb|CR730398.2|CNS0GQIR Tetraodon nigroviridis full-length cDNA Length = 1151 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 aggaccagaagcagaagatt 415 |||||||||||||||||||| Sbjct: 661 aggaccagaagcagaagatt 680
>emb|CR728178.2|CNS0GOT4 Tetraodon nigroviridis full-length cDNA Length = 1255 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 aggaccagaagcagaagatt 415 |||||||||||||||||||| Sbjct: 735 aggaccagaagcagaagatt 754
>emb|CR728388.1|CNS0GOYY Tetraodon nigroviridis full-length cDNA Length = 1200 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 aggaccagaagcagaagatt 415 |||||||||||||||||||| Sbjct: 711 aggaccagaagcagaagatt 730
>emb|CR727604.2|CNS0GOD6 Tetraodon nigroviridis full-length cDNA Length = 1255 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 aggaccagaagcagaagatt 415 |||||||||||||||||||| Sbjct: 735 aggaccagaagcagaagatt 754
>emb|CR725585.2|CNS0GMT3 Tetraodon nigroviridis full-length cDNA Length = 1254 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 aggaccagaagcagaagatt 415 |||||||||||||||||||| Sbjct: 735 aggaccagaagcagaagatt 754
>emb|CR720120.2|CNS0GILA Tetraodon nigroviridis full-length cDNA Length = 1264 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 aggaccagaagcagaagatt 415 |||||||||||||||||||| Sbjct: 743 aggaccagaagcagaagatt 762
>emb|CR718814.2|CNS0GHL0 Tetraodon nigroviridis full-length cDNA Length = 823 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 aggaccagaagcagaagatt 415 |||||||||||||||||||| Sbjct: 366 aggaccagaagcagaagatt 385
>emb|CR713974.2|CNS0GDUQ Tetraodon nigroviridis full-length cDNA Length = 1235 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 aggaccagaagcagaagatt 415 |||||||||||||||||||| Sbjct: 712 aggaccagaagcagaagatt 731
>emb|CR698335.2|CNS0G1SB Tetraodon nigroviridis full-length cDNA Length = 1149 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 aggaccagaagcagaagatt 415 |||||||||||||||||||| Sbjct: 654 aggaccagaagcagaagatt 673
>emb|CR695593.2|CNS0FZO5 Tetraodon nigroviridis full-length cDNA Length = 1224 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 aggaccagaagcagaagatt 415 |||||||||||||||||||| Sbjct: 719 aggaccagaagcagaagatt 738
>emb|CR695322.2|CNS0FZGM Tetraodon nigroviridis full-length cDNA Length = 1175 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 aggaccagaagcagaagatt 415 |||||||||||||||||||| Sbjct: 727 aggaccagaagcagaagatt 746
>emb|CR681079.1|CNS0FOGZ Tetraodon nigroviridis full-length cDNA Length = 1220 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 aggaccagaagcagaagatt 415 |||||||||||||||||||| Sbjct: 722 aggaccagaagcagaagatt 741
>emb|CR679430.2|CNS0FN76 Tetraodon nigroviridis full-length cDNA Length = 880 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 aggaccagaagcagaagatt 415 |||||||||||||||||||| Sbjct: 366 aggaccagaagcagaagatt 385
>emb|CR672430.2|CNS0FHTG Tetraodon nigroviridis full-length cDNA Length = 1252 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 aggaccagaagcagaagatt 415 |||||||||||||||||||| Sbjct: 737 aggaccagaagcagaagatt 756
>emb|CR665772.2|CNS0FCOI Tetraodon nigroviridis full-length cDNA Length = 1264 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 aggaccagaagcagaagatt 415 |||||||||||||||||||| Sbjct: 744 aggaccagaagcagaagatt 763
>emb|CR662667.2|CNS0FAA9 Tetraodon nigroviridis full-length cDNA Length = 1213 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 aggaccagaagcagaagatt 415 |||||||||||||||||||| Sbjct: 746 aggaccagaagcagaagatt 765
>emb|CR660792.2|CNS0F8U6 Tetraodon nigroviridis full-length cDNA Length = 1251 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 aggaccagaagcagaagatt 415 |||||||||||||||||||| Sbjct: 735 aggaccagaagcagaagatt 754
>emb|CR657094.2|CNS0F5ZG Tetraodon nigroviridis full-length cDNA Length = 799 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 aggaccagaagcagaagatt 415 |||||||||||||||||||| Sbjct: 283 aggaccagaagcagaagatt 302
>emb|CR653487.2|CNS0F379 Tetraodon nigroviridis full-length cDNA Length = 1156 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 aggaccagaagcagaagatt 415 |||||||||||||||||||| Sbjct: 713 aggaccagaagcagaagatt 732
>emb|CR650471.2|CNS0F0VH Tetraodon nigroviridis full-length cDNA Length = 1232 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 aggaccagaagcagaagatt 415 |||||||||||||||||||| Sbjct: 725 aggaccagaagcagaagatt 744
>emb|CR648494.1|CNS0EZCK Tetraodon nigroviridis full-length cDNA Length = 1229 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 aggaccagaagcagaagatt 415 |||||||||||||||||||| Sbjct: 723 aggaccagaagcagaagatt 742
>emb|CR648117.2|CNS0EZ23 Tetraodon nigroviridis full-length cDNA Length = 1198 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 aggaccagaagcagaagatt 415 |||||||||||||||||||| Sbjct: 689 aggaccagaagcagaagatt 708
>emb|CR647070.2|CNS0EY90 Tetraodon nigroviridis full-length cDNA Length = 886 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 aggaccagaagcagaagatt 415 |||||||||||||||||||| Sbjct: 366 aggaccagaagcagaagatt 385
>emb|CR634699.2|CNS0EOPD Tetraodon nigroviridis full-length cDNA Length = 1203 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 aggaccagaagcagaagatt 415 |||||||||||||||||||| Sbjct: 700 aggaccagaagcagaagatt 719
>gb|AC137522.11| Medicago truncatula clone mth2-9h8, complete sequence Length = 117720 Score = 40.1 bits (20), Expect = 6.2 Identities = 74/92 (80%) Strand = Plus / Minus Query: 221 ttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcacccaggcctgcctc 280 ||||| || ||||| || ||||||||| ||||||| || || || | |||||||||| Sbjct: 98153 ttccctgtttgccggccttgctacgagtacgagcgaaaagaagggaatcaggcctgccct 98094 Query: 281 cagtgcaagaccaagtacaagcgccacaaagg 312 ||||||||||| | ||||| |||| |||||| Sbjct: 98093 cagtgcaagactagatacaaacgcctcaaagg 98062
>emb|AL359815.26| Human DNA sequence from clone RP11-63N8 on chromosome 1 Contains the 3' end of the ALPL gene for alkaline phosphatase, liver/bone/kidney, the RAP1GA1 gene for RAP1, GTPase activating protein 1, a novel gene, the 3' end of the USP31 gene for ubiquitin specific protease 31 and a CpG island, complete sequence Length = 149651 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 gggcacccaggcctgcctcc 281 |||||||||||||||||||| Sbjct: 43332 gggcacccaggcctgcctcc 43351
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 tgccgggttgatcgccctgc 88 |||||||||||||||||||| Sbjct: 2361290 tgccgggttgatcgccctgc 2361309
>gb|AC084765.9| Oryza sativa chromosome 3 BAC OSJNBa0090L05 genomic sequence, complete sequence Length = 147130 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 cccctccccctccgcgctcc 25 |||||||||||||||||||| Sbjct: 64616 cccctccccctccgcgctcc 64635
>emb|CR387927.9| Zebrafish DNA sequence from clone CH211-260P11 in linkage group 14, complete sequence Length = 149672 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 aggaccagaagcagaagatt 415 |||||||||||||||||||| Sbjct: 139684 aggaccagaagcagaagatt 139703
>emb|BX927102.12| Zebrafish DNA sequence from clone CH211-139C17 in linkage group 12, complete sequence Length = 166615 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 277 cctccagtgcaagaccaagtacaa 300 |||||||||||||||||| ||||| Sbjct: 10173 cctccagtgcaagaccaaatacaa 10196
>gb|AC010030.10| Drosophila melanogaster 3L BAC RP98-2C14 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 200859 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 actgccccctccccctccgc 20 |||||||||||||||||||| Sbjct: 91720 actgccccctccccctccgc 91739
>gb|AE011925.1| Xanthomonas axonopodis pv. citri str. 306, section 303 of 469 of the complete genome Length = 12478 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 333 aggaaggcgacgacactgatgccg 356 |||||||||||||||| ||||||| Sbjct: 11960 aggaaggcgacgacaccgatgccg 11937
>gb|AC008774.7| Homo sapiens chromosome 5 clone CTD-2018M7, complete sequence Length = 128781 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 cactgaggaccagaagcaga 410 |||||||||||||||||||| Sbjct: 88667 cactgaggaccagaagcaga 88648
>gb|AC034245.5| Homo sapiens chromosome 5 clone RP11-155L15, complete sequence Length = 158094 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 cactgaggaccagaagcaga 410 |||||||||||||||||||| Sbjct: 113245 cactgaggaccagaagcaga 113264
>gb|AC159747.8| Mus musculus 10 BAC RP23-416G20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 194198 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 aggagggcacccaggcctgc 277 |||||||||||||||||||| Sbjct: 30706 aggagggcacccaggcctgc 30725
>ref|XM_579834.1| PREDICTED: Rattus norvegicus LOC498535 (LOC498535), mRNA Length = 830 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 393 ctgaggaccagaagcagaag 412 |||||||||||||||||||| Sbjct: 50 ctgaggaccagaagcagaag 31
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 gacggcgaggtcttcgccgc 204 |||||||||||||||||||| Sbjct: 65079 gacggcgaggtcttcgccgc 65098
>emb|BX005404.7| Zebrafish DNA sequence from clone DKEY-21I14 in linkage group 15, complete sequence Length = 229643 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 aggaccagaagcagaagatt 415 |||||||||||||||||||| Sbjct: 193032 aggaccagaagcagaagatt 193013
>emb|BX248121.9| Zebrafish DNA sequence from clone CH211-160D20 in linkage group 18, complete sequence Length = 201816 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 aggaccagaagcagaagatt 415 |||||||||||||||||||| Sbjct: 32705 aggaccagaagcagaagatt 32724
>gb|AE003546.4| Drosophila melanogaster chromosome 3L, section 39 of 83 of the complete sequence Length = 281589 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 actgccccctccccctccgc 20 |||||||||||||||||||| Sbjct: 20334 actgccccctccccctccgc 20353
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 catggacggcgacgcggacg 113 |||||||||||||||||||| Sbjct: 1043437 catggacggcgacgcggacg 1043418
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 150 gccagatctgcgccgacagcctgg 173 |||||||| ||||||||||||||| Sbjct: 1089165 gccagatcggcgccgacagcctgg 1089142 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,753,525 Number of Sequences: 3902068 Number of extensions: 3753525 Number of successful extensions: 93619 Number of sequences better than 10.0: 145 Number of HSP's better than 10.0 without gapping: 148 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 91936 Number of HSP's gapped (non-prelim): 1680 length of query: 463 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 441 effective length of database: 17,147,199,772 effective search space: 7561915099452 effective search space used: 7561915099452 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)