>COPG2_MOUSE (Q9QXK3) Coatomer subunit gamma-2 (Gamma-2 coat protein) (Gamma-2|
           COP)
          Length = 871

 Score = 80.1 bits (196), Expect = 2e-15
 Identities = 36/60 (60%), Positives = 48/60 (80%)
 Frame = +3

Query: 255 IEKGAVLQEARVFHDPQLDARRCCQVITKLLYLLNQGDTFTKVEATEVFFATTKLFQSKD 434
           +EK AVLQEAR+F++  ++ RRC  ++TK+LYLLNQG+ F  +EATE FFA T+LFQS D
Sbjct: 22  LEKSAVLQEARIFNETPINPRRCLHILTKILYLLNQGEHFGTMEATEAFFAMTRLFQSND 81

>COPG2_HUMAN (Q9UBF2) Coatomer subunit gamma-2 (Gamma-2 coat protein) (Gamma-2|
           COP)
          Length = 871

 Score = 79.7 bits (195), Expect = 3e-15
 Identities = 36/60 (60%), Positives = 47/60 (78%)
 Frame = +3

Query: 255 IEKGAVLQEARVFHDPQLDARRCCQVITKLLYLLNQGDTFTKVEATEVFFATTKLFQSKD 434
           +EK AVLQEAR+F++  ++ RRC  ++TK+LYLLNQG+ F   EATE FFA T+LFQS D
Sbjct: 22  LEKSAVLQEARIFNETPINPRRCLHILTKILYLLNQGEHFGTTEATEAFFAMTRLFQSND 81

>COPG_HUMAN (Q9Y678) Coatomer subunit gamma (Gamma-coat protein) (Gamma-COP)|
          Length = 874

 Score = 77.4 bits (189), Expect = 1e-14
 Identities = 35/60 (58%), Positives = 46/60 (76%)
 Frame = +3

Query: 255 IEKGAVLQEARVFHDPQLDARRCCQVITKLLYLLNQGDTFTKVEATEVFFATTKLFQSKD 434
           +EK AVLQEARVF++  ++ R+C  ++TK+LYL+NQG+     EATE FFA TKLFQS D
Sbjct: 22  LEKSAVLQEARVFNETPINPRKCAHILTKILYLINQGEHLGTTEATEAFFAMTKLFQSND 81

>COPG_BOVIN (P53620) Coatomer subunit gamma (Gamma-coat protein) (Gamma-COP)|
          Length = 874

 Score = 77.4 bits (189), Expect = 1e-14
 Identities = 35/60 (58%), Positives = 46/60 (76%)
 Frame = +3

Query: 255 IEKGAVLQEARVFHDPQLDARRCCQVITKLLYLLNQGDTFTKVEATEVFFATTKLFQSKD 434
           +EK AVLQEARVF++  ++ R+C  ++TK+LYL+NQG+     EATE FFA TKLFQS D
Sbjct: 22  LEKSAVLQEARVFNETPINPRKCAHILTKILYLINQGEHLGTTEATEAFFAMTKLFQSND 81

>COPG_CAEEL (Q22498) Probable coatomer subunit gamma (Gamma-coat protein)|
           (Gamma-COP)
          Length = 870

 Score = 73.6 bits (179), Expect = 2e-13
 Identities = 30/60 (50%), Positives = 48/60 (80%)
 Frame = +3

Query: 255 IEKGAVLQEARVFHDPQLDARRCCQVITKLLYLLNQGDTFTKVEATEVFFATTKLFQSKD 434
           ++K +VLQEAR F++  ++AR+CC +++KL+Y++ QG++  + EATE FF  TKL+QSKD
Sbjct: 18  LDKTSVLQEARAFNETPINARKCCFILSKLIYIIQQGESIGRTEATEAFFGVTKLWQSKD 77

>COPG_SCHPO (P87140) Probable coatomer subunit gamma (Gamma-coat protein)|
           (Gamma-COP)
          Length = 905

 Score = 52.4 bits (124), Expect = 5e-07
 Identities = 23/60 (38%), Positives = 39/60 (65%)
 Frame = +3

Query: 255 IEKGAVLQEARVFHDPQLDARRCCQVITKLLYLLNQGDTFTKVEATEVFFATTKLFQSKD 434
           + +  V Q+AR F+   +  R+  ++++K+ YL+  G+ F + +ATE+FF  TKLFQ KD
Sbjct: 18  VNQVTVTQDARAFNSSSISPRKSRRLLSKIAYLIYTGEHFQEKQATELFFGITKLFQHKD 77

>COPG_YEAST (P32074) Coatomer subunit gamma (Gamma-coat protein) (Gamma-COP)|
          Length = 935

 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 23/60 (38%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
 Frame = +3

Query: 258 EKGAVLQEA-RVFHDPQLDARRCCQVITKLLYLLNQGDTFTKVEATEVFFATTKLFQSKD 434
           +K  + Q+    F++  ++++RC  +I++LL LL QG+TF + EAT +FF+ +KLFQ ++
Sbjct: 19  DKMTIYQDCMNTFNESPVNSKRCRLLISRLLRLLAQGETFPQNEATALFFSISKLFQHQN 78

>ICP0_EHV1V (P84445) Trans-acting transcriptional protein ICP0 (Infected cell|
           protein 0)
          Length = 532

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = +1

Query: 49  SSLAKPRDKDSRELSRRPAPPPFSRHSGR 135
           SS   PR +DSR    RP PP   R  GR
Sbjct: 247 SSAQAPRQEDSRPARARPGPPTRGRRRGR 275

>ICP0_EHV1B (P28990) Trans-acting transcriptional protein ICP0|
          Length = 532

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = +1

Query: 49  SSLAKPRDKDSRELSRRPAPPPFSRHSGR 135
           SS   PR +DSR    RP PP   R  GR
Sbjct: 247 SSAQAPRQEDSRPARARPGPPTRGRRRGR 275

>MTB1_BRUAB (P0C116) Modification methylase BabI (EC 2.1.1.72)|
           (Adenine-specific methyltransferase BabI) (M.BabI)
           (M.CcrMI)
          Length = 377

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -2

Query: 323 ASPRIKLRVVEDAGLLQDGTLLDAEGRR 240
           A PR+    V +AGLL+ GT+L  E RR
Sbjct: 284 AEPRVAFTSVMEAGLLRPGTVLCDERRR 311

>MTB1_BRUA2 (Q2YMK2) Modification methylase BabI (EC 2.1.1.72)|
           (Adenine-specific methyltransferase BabI) (M.BabI)
           (M.CcrMI)
          Length = 377

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -2

Query: 323 ASPRIKLRVVEDAGLLQDGTLLDAEGRR 240
           A PR+    V +AGLL+ GT+L  E RR
Sbjct: 284 AEPRVAFTSVMEAGLLRPGTVLCDERRR 311


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,824,042
Number of Sequences: 219361
Number of extensions: 718175
Number of successful extensions: 2592
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2580
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2511994855
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)