ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl02g12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC147427.2| Oryza sativa chromosome 3 B1394A07 genomic sequence, complete sequence Length = 175704 Score = 194 bits (98), Expect = 2e-46 Identities = 125/134 (93%) Strand = Plus / Plus Query: 309 gcggcggggcgccgcaggtggacacaggcaagtacgtgcgctacacccccgagcaggtgg 368 |||| ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 91176 gcggaggggcgccgcaagtggacacgggcaagtacgtgcgctacaccccggagcaggtgg 91235 Query: 369 atgcgctggagcgcgtctacagcgagtgccccaagcccagctcgctccgccggcagcagc 428 | ||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 91236 aggcgctggagcgggtctacggcgagtgccccaagcccagctcgctccgccgccagcagc 91295 Query: 429 tcatacgcgagtgc 442 |||| ||||||||| Sbjct: 91296 tcatccgcgagtgc 91309 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 117 ggcatgacgcggcggcgaccctggccctggctc 149 ||||||||||||||||| || ||||| |||||| Sbjct: 90967 ggcatgacgcggcggcgcccgtggccgtggctc 90999
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 194 bits (98), Expect = 2e-46 Identities = 125/134 (93%) Strand = Plus / Minus Query: 309 gcggcggggcgccgcaggtggacacaggcaagtacgtgcgctacacccccgagcaggtgg 368 |||| ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 24544684 gcggaggggcgccgcaagtggacacgggcaagtacgtgcgctacaccccggagcaggtgg 24544625 Query: 369 atgcgctggagcgcgtctacagcgagtgccccaagcccagctcgctccgccggcagcagc 428 | ||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 24544624 aggcgctggagcgggtctacggcgagtgccccaagcccagctcgctccgccgccagcagc 24544565 Query: 429 tcatacgcgagtgc 442 |||| ||||||||| Sbjct: 24544564 tcatccgcgagtgc 24544551 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 335 ggcaagtacgtgcgctacacccccgagcaggtggatgcgctggagcgcgtctacagcgag 394 ||||||||||||| |||||| || | |||||||| ||||||||||| || ||| |||| Sbjct: 31566247 ggcaagtacgtgcactacacgccgggtcaggtggaggcgctggagcgggtgtacgccgag 31566306 Query: 395 tgccccaagcccag 408 |||||||||||||| Sbjct: 31566307 tgccccaagcccag 31566320 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 344 gtgcgctacacccccgagcaggtggatgcgctggagcgcgtctacagcgagtgccccaag 403 ||||||||||| || ||||||||||| ||||| ||||| || ||| ||| ||||||||| Sbjct: 529286 gtgcgctacacgcctgagcaggtggaggcgcttgagcgggtgtacgccgattgccccaag 529345 Query: 404 cc 405 || Sbjct: 529346 cc 529347 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 117 ggcatgacgcggcggcgaccctggccctggctc 149 ||||||||||||||||| || ||||| |||||| Sbjct: 24544893 ggcatgacgcggcggcgcccgtggccgtggctc 24544861 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 ccggcggcggcagcggcggg 316 |||||||||||||||||||| Sbjct: 35256183 ccggcggcggcagcggcggg 35256202 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 cggcggcggcagcggcgggg 317 |||||||||||||||||||| Sbjct: 34048889 cggcggcggcagcggcgggg 34048870 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 cggcggcggcagcggcgggg 317 |||||||||||||||||||| Sbjct: 32061883 cggcggcggcagcggcgggg 32061864 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 297 ccggcggcggcagcggcggggcgc 320 ||||||||||| |||||||||||| Sbjct: 30323317 ccggcggcggcggcggcggggcgc 30323340
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 194 bits (98), Expect = 2e-46 Identities = 125/134 (93%) Strand = Plus / Minus Query: 309 gcggcggggcgccgcaggtggacacaggcaagtacgtgcgctacacccccgagcaggtgg 368 |||| ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 24462153 gcggaggggcgccgcaagtggacacgggcaagtacgtgcgctacaccccggagcaggtgg 24462094 Query: 369 atgcgctggagcgcgtctacagcgagtgccccaagcccagctcgctccgccggcagcagc 428 | ||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 24462093 aggcgctggagcgggtctacggcgagtgccccaagcccagctcgctccgccgccagcagc 24462034 Query: 429 tcatacgcgagtgc 442 |||| ||||||||| Sbjct: 24462033 tcatccgcgagtgc 24462020 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 335 ggcaagtacgtgcgctacacccccgagcaggtggatgcgctggagcgcgtctacagcgag 394 ||||||||||||| |||||| || | |||||||| ||||||||||| || ||| |||| Sbjct: 31656753 ggcaagtacgtgcactacacgccgggtcaggtggaggcgctggagcgggtgtacgccgag 31656812 Query: 395 tgccccaagcccag 408 |||||||||||||| Sbjct: 31656813 tgccccaagcccag 31656826 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 344 gtgcgctacacccccgagcaggtggatgcgctggagcgcgtctacagcgagtgccccaag 403 ||||||||||| || ||||||||||| ||||| ||||| || ||| ||| ||||||||| Sbjct: 529284 gtgcgctacacgcctgagcaggtggaggcgcttgagcgggtgtacgccgattgccccaag 529343 Query: 404 cc 405 || Sbjct: 529344 cc 529345 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 117 ggcatgacgcggcggcgaccctggccctggctc 149 ||||||||||||||||| || ||||| |||||| Sbjct: 24462362 ggcatgacgcggcggcgcccgtggccgtggctc 24462330 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 ccggcggcggcagcggcggg 316 |||||||||||||||||||| Sbjct: 35346255 ccggcggcggcagcggcggg 35346274 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 cggcggcggcagcggcgggg 317 |||||||||||||||||||| Sbjct: 34139361 cggcggcggcagcggcgggg 34139342 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 cggcggcggcagcggcgggg 317 |||||||||||||||||||| Sbjct: 32152395 cggcggcggcagcggcgggg 32152376 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 297 ccggcggcggcagcggcggggcgc 320 ||||||||||| |||||||||||| Sbjct: 30414739 ccggcggcggcggcggcggggcgc 30414762
>dbj|AK103284.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033124M18, full insert sequence Length = 3082 Score = 194 bits (98), Expect = 2e-46 Identities = 125/134 (93%) Strand = Plus / Plus Query: 309 gcggcggggcgccgcaggtggacacaggcaagtacgtgcgctacacccccgagcaggtgg 368 |||| ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 410 gcggaggggcgccgcaagtggacacgggcaagtacgtgcgctacaccccggagcaggtgg 469 Query: 369 atgcgctggagcgcgtctacagcgagtgccccaagcccagctcgctccgccggcagcagc 428 | ||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 470 aggcgctggagcgggtctacggcgagtgccccaagcccagctcgctccgccgccagcagc 529 Query: 429 tcatacgcgagtgc 442 |||| ||||||||| Sbjct: 530 tcatccgcgagtgc 543 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 117 ggcatgacgcggcggcgaccctggccctggctc 149 ||||||||||||||||| || ||||| |||||| Sbjct: 201 ggcatgacgcggcggcgcccgtggccgtggctc 233
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 141 bits (71), Expect = 2e-30 Identities = 113/127 (88%) Strand = Plus / Minus Query: 316 ggcgccgcaggtggacacaggcaagtacgtgcgctacacccccgagcaggtggatgcgct 375 |||||||||||||||| | || |||||||| || ||||| |||||||||||||| ||||| Sbjct: 25960572 ggcgccgcaggtggacgccgggaagtacgtccggtacacgcccgagcaggtggaggcgct 25960513 Query: 376 ggagcgcgtctacagcgagtgccccaagcccagctcgctccgccggcagcagctcatacg 435 |||||| || |||| ||||||||||||||||||||| |||||||| ||||||||||| || Sbjct: 25960512 ggagcgggtgtacaccgagtgccccaagcccagctcactccgccgccagcagctcatccg 25960453 Query: 436 cgagtgc 442 |||||| Sbjct: 25960452 ggagtgc 25960446 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 gaggcggcgcgcggagggca 120 |||||||||||||||||||| Sbjct: 102528 gaggcggcgcgcggagggca 102547
>dbj|AK102183.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086M14, full insert sequence Length = 3140 Score = 141 bits (71), Expect = 2e-30 Identities = 113/127 (88%) Strand = Plus / Plus Query: 316 ggcgccgcaggtggacacaggcaagtacgtgcgctacacccccgagcaggtggatgcgct 375 |||||||||||||||| | || |||||||| || ||||| |||||||||||||| ||||| Sbjct: 335 ggcgccgcaggtggacgccgggaagtacgtccggtacacgcccgagcaggtggaggcgct 394 Query: 376 ggagcgcgtctacagcgagtgccccaagcccagctcgctccgccggcagcagctcatacg 435 |||||| || |||| ||||||||||||||||||||| |||||||| ||||||||||| || Sbjct: 395 ggagcgggtgtacaccgagtgccccaagcccagctcactccgccgccagcagctcatccg 454 Query: 436 cgagtgc 442 |||||| Sbjct: 455 ggagtgc 461
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 141 bits (71), Expect = 2e-30 Identities = 113/127 (88%) Strand = Plus / Minus Query: 316 ggcgccgcaggtggacacaggcaagtacgtgcgctacacccccgagcaggtggatgcgct 375 |||||||||||||||| | || |||||||| || ||||| |||||||||||||| ||||| Sbjct: 25888750 ggcgccgcaggtggacgccgggaagtacgtccggtacacgcccgagcaggtggaggcgct 25888691 Query: 376 ggagcgcgtctacagcgagtgccccaagcccagctcgctccgccggcagcagctcatacg 435 |||||| || |||| ||||||||||||||||||||| |||||||| ||||||||||| || Sbjct: 25888690 ggagcgggtgtacaccgagtgccccaagcccagctcactccgccgccagcagctcatccg 25888631 Query: 436 cgagtgc 442 |||||| Sbjct: 25888630 ggagtgc 25888624 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 gaggcggcgcgcggagggca 120 |||||||||||||||||||| Sbjct: 102528 gaggcggcgcgcggagggca 102547
>emb|AL713934.5|CNS07YPF Oryza sativa chromosome 12, . Partial sequence from BAC OJ1257_B09 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 61296 Score = 141 bits (71), Expect = 2e-30 Identities = 113/127 (88%) Strand = Plus / Plus Query: 316 ggcgccgcaggtggacacaggcaagtacgtgcgctacacccccgagcaggtggatgcgct 375 |||||||||||||||| | || |||||||| || ||||| |||||||||||||| ||||| Sbjct: 14717 ggcgccgcaggtggacgccgggaagtacgtccggtacacgcccgagcaggtggaggcgct 14776 Query: 376 ggagcgcgtctacagcgagtgccccaagcccagctcgctccgccggcagcagctcatacg 435 |||||| || |||| ||||||||||||||||||||| |||||||| ||||||||||| || Sbjct: 14777 ggagcgggtgtacaccgagtgccccaagcccagctcactccgccgccagcagctcatccg 14836 Query: 436 cgagtgc 442 |||||| Sbjct: 14837 ggagtgc 14843
>emb|AL713940.4|CNS07YPM Oryza sativa chromosome 12, . BAC OJ1327_A12 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 161806 Score = 141 bits (71), Expect = 2e-30 Identities = 113/127 (88%) Strand = Plus / Plus Query: 316 ggcgccgcaggtggacacaggcaagtacgtgcgctacacccccgagcaggtggatgcgct 375 |||||||||||||||| | || |||||||| || ||||| |||||||||||||| ||||| Sbjct: 151097 ggcgccgcaggtggacgccgggaagtacgtccggtacacgcccgagcaggtggaggcgct 151156 Query: 376 ggagcgcgtctacagcgagtgccccaagcccagctcgctccgccggcagcagctcatacg 435 |||||| || |||| ||||||||||||||||||||| |||||||| ||||||||||| || Sbjct: 151157 ggagcgggtgtacaccgagtgccccaagcccagctcactccgccgccagcagctcatccg 151216 Query: 436 cgagtgc 442 |||||| Sbjct: 151217 ggagtgc 151223
>ref|NM_197030.1| Oryza sativa (japonica cultivar-group) putative homeodomain leucine zipper protein (OSJNBa0093B11.11), mRNA Length = 2523 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 335 ggcaagtacgtgcgctacacccccgagcaggtggatgcgctggagcgcgtctacagcgag 394 |||||||||||||| ||||| || ||||||||||| ||||||||| | || ||| |||| Sbjct: 82 ggcaagtacgtgcggtacacgccggagcaggtggaggcgctggagagggtgtacgccgag 141 Query: 395 tgccccaagcccagctcgctccgccggcagcagct 429 ||||||||||||||||| |||||| |||||||| Sbjct: 142 tgccccaagcccagctcctcccgccgccagcagct 176
>gb|AY423716.1| Oryza sativa (japonica cultivar-group) homeodomain leucine-zipper protein Hox9 mRNA, complete cds Length = 3174 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 335 ggcaagtacgtgcgctacacccccgagcaggtggatgcgctggagcgcgtctacagcgag 394 |||||||||||||| ||||| || ||||||||||| ||||||||| | || ||| |||| Sbjct: 363 ggcaagtacgtgcggtacacgccggagcaggtggaggcgctggagagggtgtacgccgag 422 Query: 395 tgccccaagcccagctcgctccgccggcagcagct 429 ||||||||||||||||| |||||| |||||||| Sbjct: 423 tgccccaagcccagctcctcccgccgccagcagct 457
>gb|AC024594.9| Oryza sativa chromosome 10 BAC OSJNBa0093B11 genomic sequence, complete sequence Length = 178692 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Minus Query: 335 ggcaagtacgtgcgctacacccccgagcaggtggatgcgctggagcgcgtctacagcgag 394 |||||||||||||| ||||| || ||||||||||| ||||||||| | || ||| |||| Sbjct: 103130 ggcaagtacgtgcggtacacgccggagcaggtggaggcgctggagagggtgtacgccgag 103071 Query: 395 tgccccaagcccagctcgctccgccggcagcagct 429 ||||||||||||||||| |||||| |||||||| Sbjct: 103070 tgccccaagcccagctcctcccgccgccagcagct 103036
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 335 ggcaagtacgtgcgctacacccccgagcaggtggatgcgctggagcgcgtctacagcgag 394 |||||||||||||| ||||| || ||||||||||| ||||||||| | || ||| |||| Sbjct: 17571501 ggcaagtacgtgcggtacacgccggagcaggtggaggcgctggagagggtgtacgccgag 17571560 Query: 395 tgccccaagcccagctcgctccgccggcagcagct 429 ||||||||||||||||| |||||| |||||||| Sbjct: 17571561 tgccccaagcccagctcctcccgccgccagcagct 17571595 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 335 ggcaagtacgtgcgctacacccccgagcaggtggatgcgctggagcgcgtctacagcgag 394 ||||||||||||| ||||| || || |||||||| ||||||||||| || ||| |||| Sbjct: 2823176 ggcaagtacgtgcagtacacgccggatcaggtggaggcgctggagcgggtgtacgccgag 2823235 Query: 395 tgccccaagcccagct 410 |||||||||||||||| Sbjct: 2823236 tgccccaagcccagct 2823251 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 300 gcggcggcagcggcggggcgccgc 323 ||||||||||||| |||||||||| Sbjct: 22001684 gcggcggcagcgggggggcgccgc 22001707 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 cggcggcggcagcggcgggg 317 |||||||||||||||||||| Sbjct: 21388264 cggcggcggcagcggcgggg 21388245 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 cggcggcggcagcggcgggg 317 |||||||||||||||||||| Sbjct: 10139559 cggcggcggcagcggcgggg 10139540
>dbj|AK102830.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033109G06, full insert sequence Length = 3000 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 335 ggcaagtacgtgcgctacacccccgagcaggtggatgcgctggagcgcgtctacagcgag 394 |||||||||||||| ||||| || ||||||||||| ||||||||| | || ||| |||| Sbjct: 210 ggcaagtacgtgcggtacacgccggagcaggtggaggcgctggagagggtgtacgccgag 269 Query: 395 tgccccaagcccagctcgctccgccggcagcagct 429 ||||||||||||||||| |||||| |||||||| Sbjct: 270 tgccccaagcccagctcctcccgccgccagcagct 304
>dbj|AK102603.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033098N12, full insert sequence Length = 3227 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 335 ggcaagtacgtgcgctacacccccgagcaggtggatgcgctggagcgcgtctacagcgag 394 |||||||||||||| ||||| || ||||||||||| ||||||||| | || ||| |||| Sbjct: 434 ggcaagtacgtgcggtacacgccggagcaggtggaggcgctggagagggtgtacgccgag 493 Query: 395 tgccccaagcccagctcgctccgccggcagcagct 429 ||||||||||||||||| |||||| |||||||| Sbjct: 494 tgccccaagcccagctcctcccgccgccagcagct 528
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 335 ggcaagtacgtgcgctacacccccgagcaggtggatgcgctggagcgcgtctacagcgag 394 |||||||||||||| ||||| || ||||||||||| ||||||||| | || ||| |||| Sbjct: 17580541 ggcaagtacgtgcggtacacgccggagcaggtggaggcgctggagagggtgtacgccgag 17580600 Query: 395 tgccccaagcccagctcgctccgccggcagcagct 429 ||||||||||||||||| |||||| |||||||| Sbjct: 17580601 tgccccaagcccagctcctcccgccgccagcagct 17580635 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 335 ggcaagtacgtgcgctacacccccgagcaggtggatgcgctggagcgcgtctacagcgag 394 ||||||||||||| ||||| || || |||||||| ||||||||||| || ||| |||| Sbjct: 2823127 ggcaagtacgtgcagtacacgccggatcaggtggaggcgctggagcgggtgtacgccgag 2823186 Query: 395 tgccccaagcccagct 410 |||||||||||||||| Sbjct: 2823187 tgccccaagcccagct 2823202 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 300 gcggcggcagcggcggggcgccgc 323 ||||||||||||| |||||||||| Sbjct: 22013347 gcggcggcagcgggggggcgccgc 22013370 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 cggcggcggcagcggcgggg 317 |||||||||||||||||||| Sbjct: 21399527 cggcggcggcagcggcgggg 21399508 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 cggcggcggcagcggcgggg 317 |||||||||||||||||||| Sbjct: 10145598 cggcggcggcagcggcgggg 10145579
>gb|DQ385515.1| Phaeoceros carolinianus class III homeodomain-leucine zipper protein C3HDZ1 (C3HDZ1) mRNA, complete cds Length = 2586 Score = 77.8 bits (39), Expect = 3e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 338 aagtacgtgcgctacacccccgagcaggtggatgcgctggagcgcgtctacagcgagtgc 397 ||||| ||||| |||||| ||||||||||| || |||||||| ||||||| ||| ||| Sbjct: 55 aagtatgtgcgttacaccaatgagcaggtggaggctctggagcgtgtctacaacgaatgc 114 Query: 398 cccaagcccagctcgctccgccggcagcagctcat 432 |||||||||||||| | || |||||||||||||| Sbjct: 115 cccaagcccagctccattcgacggcagcagctcat 149
>ref|NM_194843.1| Oryza sativa (japonica cultivar-group) putative homeodomain leucine zipper protein (OSJNBb0016M10.1), mRNA Length = 654 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 335 ggcaagtacgtgcgctacacccccgagcaggtggatgcgctggagcgcgtctacagcgag 394 ||||||||||||| ||||| || || |||||||| ||||||||||| || ||| |||| Sbjct: 472 ggcaagtacgtgcagtacacgccggatcaggtggaggcgctggagcgggtgtacgccgag 531 Query: 395 tgccccaagcccagct 410 |||||||||||||||| Sbjct: 532 tgccccaagcccagct 547
>gb|AC091665.3| Oryza sativa chromosome 10 clone OSJNBb0016M10, complete sequence Length = 118101 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 335 ggcaagtacgtgcgctacacccccgagcaggtggatgcgctggagcgcgtctacagcgag 394 ||||||||||||| ||||| || || |||||||| ||||||||||| || ||| |||| Sbjct: 4208 ggcaagtacgtgcagtacacgccggatcaggtggaggcgctggagcgggtgtacgccgag 4267 Query: 395 tgccccaagcccagct 410 |||||||||||||||| Sbjct: 4268 tgccccaagcccagct 4283
>dbj|AK059657.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-D05, full insert sequence Length = 1149 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 335 ggcaagtacgtgcgctacacccccgagcaggtggatgcgctggagcgcgtctacagcgag 394 ||||||||||||| ||||| || || |||||||| ||||||||||| || ||| |||| Sbjct: 739 ggcaagtacgtgcagtacacgccggatcaggtggaggcgctggagcgggtgtacgccgag 798 Query: 395 tgccccaagcccagct 410 |||||||||||||||| Sbjct: 799 tgccccaagcccagct 814
>ref|NM_188279.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2697 Score = 67.9 bits (34), Expect = 3e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 336 gcaagtacgtgcgctacacccccgagcaggtggatgcgctggagcgcgtctacagcgagt 395 ||||||||||| | ||||| || ||||||||||| ||||||||| | | ||| ||||| Sbjct: 32 gcaagtacgtgaggtacacgccggagcaggtggaggcgctggagaggctgtactacgagt 91 Query: 396 gccccaagcccagctcgctccgccggcagcagct 429 | |||||||| |||||||| || ||||||||||| Sbjct: 92 gtcccaagccgagctcgctgcggcggcagcagct 125
>gb|AC133450.6| Oryza sativa chromosome 3 BAC OSJNBa0072F13 genomic sequence, complete sequence Length = 150743 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 335 ggcaagtacgtgcgctacacccccgagcaggtggatgcgctggagcgcgtctacagcgag 394 ||||||||||||| |||||| || | |||||||| ||||||||||| || ||| |||| Sbjct: 114420 ggcaagtacgtgcactacacgccgggtcaggtggaggcgctggagcgggtgtacgccgag 114361 Query: 395 tgccccaagcccag 408 |||||||||||||| Sbjct: 114360 tgccccaagcccag 114347
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 335 ggcaagtacgtgcgctacacccccgagcaggtggatgcgctggagcgcgtctacagcgag 394 ||||||||||||| |||||| || | |||||||| ||||||||||| || ||| |||| Sbjct: 26359 ggcaagtacgtgcactacacgccgggtcaggtggaggcgctggagcgggtgtacgccgag 26300 Query: 395 tgccccaagcccag 408 |||||||||||||| Sbjct: 26299 tgccccaagcccag 26286
>gb|DQ385532.1| Marchantia polymorpha class III homeodomain-leucine zipper (C3HDZ1) gene, complete cds Length = 9458 Score = 67.9 bits (34), Expect = 3e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 335 ggcaagtacgtgcgctacacccccgagcaggtggatgcgctggagcgcgtctacagcgag 394 |||||||| ||||||||||| ||| |||||||| || ||||||||||||||| ||| Sbjct: 46 ggcaagtatgtgcgctacacaaacgaacaggtggaggctttggagcgcgtctacaatgag 105 Query: 395 tgccccaagcccagctcg 412 ||||| |||||||||||| Sbjct: 106 tgcccgaagcccagctcg 123
>gb|DQ385514.1| Marchantia polymorpha class III homeodomain-leucine zipper protein C3HDZ1 (C3HDZ1) mRNA, complete cds Length = 2583 Score = 67.9 bits (34), Expect = 3e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 335 ggcaagtacgtgcgctacacccccgagcaggtggatgcgctggagcgcgtctacagcgag 394 |||||||| ||||||||||| ||| |||||||| || ||||||||||||||| ||| Sbjct: 46 ggcaagtatgtgcgctacacaaacgaacaggtggaggctttggagcgcgtctacaatgag 105 Query: 395 tgccccaagcccagctcg 412 ||||| |||||||||||| Sbjct: 106 tgcccgaagcccagctcg 123
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 67.9 bits (34), Expect = 3e-08 Identities = 79/94 (84%) Strand = Plus / Minus Query: 336 gcaagtacgtgcgctacacccccgagcaggtggatgcgctggagcgcgtctacagcgagt 395 ||||||||||| | ||||| || ||||||||||| ||||||||| | | ||| ||||| Sbjct: 5430375 gcaagtacgtgaggtacacgccggagcaggtggaggcgctggagaggctgtactacgagt 5430316 Query: 396 gccccaagcccagctcgctccgccggcagcagct 429 | |||||||| |||||||| || ||||||||||| Sbjct: 5430315 gtcccaagccgagctcgctgcggcggcagcagct 5430282 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 239 cacggcgggcacggcgggcacggcgggg 266 ||||| |||||||| ||||||||||||| Sbjct: 31383564 cacggggggcacggtgggcacggcgggg 31383537 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 cccggcggcggcagcggcgg 315 |||||||||||||||||||| Sbjct: 8743898 cccggcggcggcagcggcgg 8743879
>dbj|AP003197.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1015E06 Length = 164583 Score = 67.9 bits (34), Expect = 3e-08 Identities = 79/94 (84%) Strand = Plus / Minus Query: 336 gcaagtacgtgcgctacacccccgagcaggtggatgcgctggagcgcgtctacagcgagt 395 ||||||||||| | ||||| || ||||||||||| ||||||||| | | ||| ||||| Sbjct: 27215 gcaagtacgtgaggtacacgccggagcaggtggaggcgctggagaggctgtactacgagt 27156 Query: 396 gccccaagcccagctcgctccgccggcagcagct 429 | |||||||| |||||||| || ||||||||||| Sbjct: 27155 gtcccaagccgagctcgctgcggcggcagcagct 27122
>dbj|AK100250.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023060H19, full insert sequence Length = 2349 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 335 ggcaagtacgtgcgctacacccccgagcaggtggatgcgctggagcgcgtctacagcgag 394 ||||||||||||| |||||| || | |||||||| ||||||||||| || ||| |||| Sbjct: 1011 ggcaagtacgtgcactacacgccgggtcaggtggaggcgctggagcgggtgtacgccgag 1070 Query: 395 tgccccaagcccag 408 |||||||||||||| Sbjct: 1071 tgccccaagcccag 1084
>gb|DQ385520.1| Selaginella kraussiana class III homeodomain-leucine zipper protein C3HDZ2 (C3HDZ2) mRNA, complete cds Length = 2523 Score = 63.9 bits (32), Expect = 4e-07 Identities = 89/108 (82%) Strand = Plus / Plus Query: 333 caggcaagtacgtgcgctacacccccgagcaggtggatgcgctggagcgcgtctacagcg 392 ||||||||||| | || ||||| ||||||||||| || ||| ||||||| ||||||| || Sbjct: 44 caggcaagtacatacggtacacgcccgagcaggtcgaggcgttggagcgtgtctacaacg 103 Query: 393 agtgccccaagcccagctcgctccgccggcagcagctcatacgcgagt 440 ||||||| || || || || |||| || ||||||||| | ||||||| Sbjct: 104 agtgcccgaaaccgagttcaatccggcgccagcagctcctccgcgagt 151
>gb|DQ385539.1| Pseudotsuga menziesii class III homeodomain-leucine zipper (C3HDZ1) gene, complete cds Length = 5694 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 359 gagcaggtggatgcgctggagcgcgtctacagcgagtgccccaagcccagctcgctccgc 418 |||||||| || || ||||||||||| ||||||||||| || ||||| |||||||| | Sbjct: 73 gagcaggtcgaagctctggagcgcgtttacagcgagtgtccgaagccaagctcgcttagg 132 Query: 419 cggcagcagct 429 ||||||||||| Sbjct: 133 cggcagcagct 143
>gb|DQ385528.1| Pseudotsuga menziesii class III homeodomain-leucine zipper protein C3HDZ1 (C3HDZ1) mRNA, complete cds Length = 2529 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 359 gagcaggtggatgcgctggagcgcgtctacagcgagtgccccaagcccagctcgctccgc 418 |||||||| || || ||||||||||| ||||||||||| || ||||| |||||||| | Sbjct: 73 gagcaggtcgaagctctggagcgcgtttacagcgagtgtccgaagccaagctcgcttagg 132 Query: 419 cggcagcagct 429 ||||||||||| Sbjct: 133 cggcagcagct 143
>gb|DQ385540.1| Pseudotsuga menziesii class III homeodomain-leucine zipper (C3HDZ2) gene, complete cds Length = 5275 Score = 60.0 bits (30), Expect = 6e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 335 ggcaagtacgtgcgctacacccccgagcaggtggatgcgctggagcgcgtctacagcgag 394 ||||||||||| || ||||| | || |||||||| || ||||| ||| |||||| || Sbjct: 46 ggcaagtacgttcggtacactgcggaacaggtggaagctctggaacgcctctacaatgac 105 Query: 395 tgccccaagcccagctcgctccgccggcagcagctcat 432 ||||||||||||||||| || || || ||||||||||| Sbjct: 106 tgccccaagcccagctctctacgtcgccagcagctcat 143
>gb|DQ385529.1| Pseudotsuga menziesii class III homeodomain-leucine zipper protein C3HDZ2 (C3HDZ2) mRNA, complete cds Length = 2520 Score = 60.0 bits (30), Expect = 6e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 335 ggcaagtacgtgcgctacacccccgagcaggtggatgcgctggagcgcgtctacagcgag 394 ||||||||||| || ||||| | || |||||||| || ||||| ||| |||||| || Sbjct: 46 ggcaagtacgttcggtacactgcggaacaggtggaagctctggaacgcctctacaatgac 105 Query: 395 tgccccaagcccagctcgctccgccggcagcagctcat 432 ||||||||||||||||| || || || ||||||||||| Sbjct: 106 tgccccaagcccagctctctacgtcgccagcagctcat 143
>gb|DQ013803.1| Phyllostachys praecox HB1 mRNA, partial cds Length = 2623 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 335 ggcaagtacgtgcgctacacccccgagcaggtggatgcgctggagcgcgtctacagcgag 394 |||||||||||||| ||||| || ||||||||||| ||||| ||||| | || ||| Sbjct: 32 ggcaagtacgtgcgatacacgccggagcaggtggaggcgctcgagcggatgtatgctgag 91 Query: 395 tgccccaagcccagctc 411 ||||||||||||||||| Sbjct: 92 tgccccaagcccagctc 108
>gb|DQ385531.1| Taxus globosa class III homeodomain-leucine zipper protein C3HDZ2 (C3HDZ2) mRNA, complete cds Length = 2532 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 359 gagcaggtggatgcgctggagcgcgtctacagcgagtgccccaagcccagctcgctccgc 418 ||||||||||| || ||||||||| | ||| |||| || |||||||| ||||| | ||| Sbjct: 70 gagcaggtggaggctctggagcgcctgtaccgcgactgtcccaagccaagctccattcgc 129 Query: 419 cggcagcagctcatacg 435 |||||||||||||||| Sbjct: 130 aggcagcagctcatacg 146
>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29 Length = 313800 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 238 gcacggcgggcacggcgggcacggcgg 264 ||||||||||||||||||||||||||| Sbjct: 139996 gcacggcgggcacggcgggcacggcgg 139970 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ggcacggcgggcacggcggg 265 |||||||||||||||||||| Sbjct: 139997 ggcacggcgggcacggcggg 139978
>ref|XM_468564.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2574 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 344 gtgcgctacacccccgagcaggtggatgcgctggagcgcgtctacagcgagtgccccaag 403 ||||||||||| || ||||||||||| ||||| ||||| || ||| ||| ||||||||| Sbjct: 85 gtgcgctacacgcctgagcaggtggaggcgcttgagcgggtgtacgccgattgccccaag 144 Query: 404 cc 405 || Sbjct: 145 cc 146
>gb|AY425991.1| Oryza sativa (japonica cultivar-group) homeodomain leucine-zipper protein Hox10 mRNA, complete cds Length = 3252 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 344 gtgcgctacacccccgagcaggtggatgcgctggagcgcgtctacagcgagtgccccaag 403 ||||||||||| || ||||||||||| ||||| ||||| || ||| ||| ||||||||| Sbjct: 495 gtgcgctacacgcctgagcaggtggaggcgcttgagcgggtgtacgccgattgccccaag 554 Query: 404 cc 405 || Sbjct: 555 cc 556
>emb|Y10293.1|SPSTTABCD Streptomyces spp. sttA, sttB, sttC, sttD and sttR genes Length = 5213 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 238 gcacggcgggcacggcgggcacggcg 263 |||||||||||||||||||||||||| Sbjct: 3604 gcacggcgggcacggcgggcacggcg 3579 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 244 cgggcacggcgggcacggcggg 265 |||||||||||||||||||||| Sbjct: 3607 cgggcacggcgggcacggcggg 3586
>dbj|AK110678.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-169-H01, full insert sequence Length = 989 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 344 gtgcgctacacccccgagcaggtggatgcgctggagcgcgtctacagcgagtgccccaag 403 ||||||||||| || ||||||||||| ||||| ||||| || ||| ||| ||||||||| Sbjct: 501 gtgcgctacacgcctgagcaggtggaggcgcttgagcgggtgtacgccgattgccccaag 560 Query: 404 cc 405 || Sbjct: 561 cc 562
>dbj|AK102378.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033091P14, full insert sequence Length = 3252 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 344 gtgcgctacacccccgagcaggtggatgcgctggagcgcgtctacagcgagtgccccaag 403 ||||||||||| || ||||||||||| ||||| ||||| || ||| ||| ||||||||| Sbjct: 495 gtgcgctacacgcctgagcaggtggaggcgcttgagcgggtgtacgccgattgccccaag 554 Query: 404 cc 405 || Sbjct: 555 cc 556
>gb|AC105733.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0043C10, complete sequence Length = 108688 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 344 gtgcgctacacccccgagcaggtggatgcgctggagcgcgtctacagcgagtgccccaag 403 ||||||||||| || ||||||||||| ||||| ||||| || ||| ||| ||||||||| Sbjct: 86632 gtgcgctacacgcctgagcaggtggaggcgcttgagcgggtgtacgccgattgccccaag 86573 Query: 404 cc 405 || Sbjct: 86572 cc 86571
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence Length = 1813164 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 242 ggcgggcacggcgggcacggcgggg 266 ||||||||||||||||||||||||| Sbjct: 338182 ggcgggcacggcgggcacggcgggg 338158
>ref|NM_210848.1| Eremothecium gossypii AFL054Cp (AFL054C), mRNA Length = 2055 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 242 ggcgggcacggcgggcacggcgggg 266 ||||||||||||||||||||||||| Sbjct: 52 ggcgggcacggcgggcacggcgggg 76
>gb|DQ216582.1| Taeniopygia guttata clone 0058P0041C09 malate dehydrogenase mitochondrial-like mRNA, complete sequence Length = 1294 Score = 48.1 bits (24), Expect = 0.024 Identities = 24/24 (100%) Strand = Plus / Minus Query: 242 ggcgggcacggcgggcacggcggg 265 |||||||||||||||||||||||| Sbjct: 88 ggcgggcacggcgggcacggcggg 65 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 gcacggcgggcacggcgggc 257 |||||||||||||||||||| Sbjct: 83 gcacggcgggcacggcgggc 64
>gb|DQ216580.1| Taeniopygia guttata clone 0058P0051G04 malate dehydrogenase mitochondrial-like mRNA, complete sequence Length = 1289 Score = 48.1 bits (24), Expect = 0.024 Identities = 24/24 (100%) Strand = Plus / Minus Query: 242 ggcgggcacggcgggcacggcggg 265 |||||||||||||||||||||||| Sbjct: 83 ggcgggcacggcgggcacggcggg 60 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 gcacggcgggcacggcgggc 257 |||||||||||||||||||| Sbjct: 78 gcacggcgggcacggcgggc 59
>gb|DQ216577.1| Taeniopygia guttata clone 0063P0023A06 malate dehydrogenase mitochondrial-like mRNA, complete sequence Length = 1291 Score = 48.1 bits (24), Expect = 0.024 Identities = 24/24 (100%) Strand = Plus / Minus Query: 242 ggcgggcacggcgggcacggcggg 265 |||||||||||||||||||||||| Sbjct: 88 ggcgggcacggcgggcacggcggg 65 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 gcacggcgggcacggcgggc 257 |||||||||||||||||||| Sbjct: 83 gcacggcgggcacggcgggc 64
>gb|DQ216576.1| Taeniopygia guttata clone 0063P0017D08 malate dehydrogenase mitochondrial-like mRNA, complete sequence Length = 1319 Score = 48.1 bits (24), Expect = 0.024 Identities = 24/24 (100%) Strand = Plus / Minus Query: 242 ggcgggcacggcgggcacggcggg 265 |||||||||||||||||||||||| Sbjct: 117 ggcgggcacggcgggcacggcggg 94 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 gcacggcgggcacggcgggc 257 |||||||||||||||||||| Sbjct: 112 gcacggcgggcacggcgggc 93
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 48.1 bits (24), Expect = 0.024 Identities = 27/28 (96%) Strand = Plus / Minus Query: 217 gatggcgggggcgatggtggtgcacggc 244 ||||||||||||||||||| |||||||| Sbjct: 3865473 gatggcgggggcgatggtgctgcacggc 3865446
>gb|DQ216578.1| Taeniopygia guttata clone 0064P0018A04 malate dehydrogenase mitochondrial-like mRNA, complete sequence Length = 1288 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Minus Query: 243 gcgggcacggcgggcacggcggg 265 ||||||||||||||||||||||| Sbjct: 85 gcgggcacggcgggcacggcggg 63 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 gcacggcgggcacggcgggc 257 |||||||||||||||||||| Sbjct: 81 gcacggcgggcacggcgggc 62
>gb|AY501430.1| Zea mays rolled leaf1 mRNA, complete cds Length = 2700 Score = 46.1 bits (23), Expect = 0.096 Identities = 59/71 (83%) Strand = Plus / Plus Query: 341 tacgtgcgctacacccccgagcaggtggatgcgctggagcgcgtctacagcgagtgcccc 400 ||||||||||||||||| ||||| || || | ||| ||||| |||||| || |||||| Sbjct: 154 tacgtgcgctacaccccggagcaagttgaggtgctcgagcggctctacatagattgcccc 213 Query: 401 aagcccagctc 411 ||||| ||||| Sbjct: 214 aagccaagctc 224
>ref|XM_502214.1| Yarrowia lipolytica CLIB122, YALI0C24189g predicted mRNA Length = 2052 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Minus Query: 241 cggcgggcacggcgggcacggcg 263 ||||||||||||||||||||||| Sbjct: 145 cggcgggcacggcgggcacggcg 123
>emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete genome; segment 18/29 Length = 292100 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Minus Query: 356 cccgagcaggtggatgcgctgga 378 ||||||||||||||||||||||| Sbjct: 123484 cccgagcaggtggatgcgctgga 123462
>emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete genome; segment 6/29 Length = 277000 Score = 46.1 bits (23), Expect = 0.096 Identities = 26/27 (96%) Strand = Plus / Minus Query: 239 cacggcgggcacggcgggcacggcggg 265 ||||||||||||||||| ||||||||| Sbjct: 252848 cacggcgggcacggcggacacggcggg 252822 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 241 cggcgggcacggcgggcacggcgg 264 |||||| ||||||||||||||||| Sbjct: 252855 cggcggacacggcgggcacggcgg 252832
>gb|DQ385533.1| Physcomitrella patens class III homeodomain-leucine zipper (C3HDZ1) gene, partial cds Length = 5211 Score = 46.1 bits (23), Expect = 0.096 Identities = 41/47 (87%) Strand = Plus / Plus Query: 338 aagtacgtgcgctacacccccgagcaggtggatgcgctggagcgcgt 384 ||||| |||||||||||| |||||| ||||| || ||||||||||| Sbjct: 16 aagtatgtgcgctacaccaacgagcaagtggaagcactggagcgcgt 62
>gb|DQ385516.1| Physcomitrella patens class III homeodomain-leucine zipper protein C3HDZ1 (C3HDZ1) mRNA, complete cds Length = 2502 Score = 46.1 bits (23), Expect = 0.096 Identities = 41/47 (87%) Strand = Plus / Plus Query: 338 aagtacgtgcgctacacccccgagcaggtggatgcgctggagcgcgt 384 ||||| |||||||||||| |||||| ||||| || ||||||||||| Sbjct: 16 aagtatgtgcgctacaccaacgagcaagtggaagcactggagcgcgt 62
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 46.1 bits (23), Expect = 0.096 Identities = 26/27 (96%) Strand = Plus / Minus Query: 220 ggcgggggcgatggtggtgcacggcgg 246 ||||| ||||||||||||||||||||| Sbjct: 29529099 ggcggcggcgatggtggtgcacggcgg 29529073 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 cccggcggcggcagcggcgg 315 |||||||||||||||||||| Sbjct: 11341760 cccggcggcggcagcggcgg 11341779 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 cggcggcggcagcggcgggg 317 |||||||||||||||||||| Sbjct: 5880256 cggcggcggcagcggcgggg 5880275 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 ccggcggcggcagcggcggg 316 |||||||||||||||||||| Sbjct: 5029520 ccggcggcggcagcggcggg 5029501
>dbj|AP003634.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0655A07 Length = 172473 Score = 46.1 bits (23), Expect = 0.096 Identities = 26/27 (96%) Strand = Plus / Minus Query: 220 ggcgggggcgatggtggtgcacggcgg 246 ||||| ||||||||||||||||||||| Sbjct: 93605 ggcggcggcgatggtggtgcacggcgg 93579
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Plus Query: 241 cggcgggcacggcgggcacggcg 263 ||||||||||||||||||||||| Sbjct: 3233332 cggcgggcacggcgggcacggcg 3233354
>ref|NM_183008.1| Homo sapiens UBX domain containing 5 (UBXD5), transcript variant 2, mRNA Length = 1771 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 264 ggggcagggaccgggaccgggacagg 289 ||||| |||||||||||||||||||| Sbjct: 1696 ggggccgggaccgggaccgggacagg 1671
>ref|NM_146222.2| Mus musculus cDNA sequence BC024479 (BC024479), mRNA Length = 2307 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 293 tcgcccggcggcggcagcggcggggc 318 ||||||||||||||||| |||||||| Sbjct: 250 tcgcccggcggcggcagtggcggggc 275
>gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 9, complete sequence Length = 1178688 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 238 gcacggcgggcacggcgggcac 259 |||||||||||||||||||||| Sbjct: 834133 gcacggcgggcacggcgggcac 834154 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 242 ggcgggcacggcgggcacggcggg 265 |||| ||||||||||||||||||| Sbjct: 834128 ggcgagcacggcgggcacggcggg 834151
>ref|XM_600204.2| PREDICTED: Bos taurus similar to potassium channel, subfamily K, member 12 (LOC521931), mRNA Length = 2867 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 298 cggcggcggcagcggcggggcg 319 |||||||||||||||||||||| Sbjct: 1487 cggcggcggcagcggcggggcg 1466
>gb|AC105958.11| Mus musculus chromosome 9, clone RP24-325P4, complete sequence Length = 195129 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 293 tcgcccggcggcggcagcggcggggc 318 ||||||||||||||||| |||||||| Sbjct: 104231 tcgcccggcggcggcagtggcggggc 104256
>gb|AF370425.1| Homo sapiens PP2243 mRNA, complete cds Length = 1721 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 264 ggggcagggaccgggaccgggacagg 289 ||||| |||||||||||||||||||| Sbjct: 1541 ggggccgggaccgggaccgggacagg 1516
>ref|XM_541888.2| PREDICTED: Canis familiaris similar to DALR anticodon binding domain containing 3 isoform 1 (LOC484772), mRNA Length = 1959 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 241 cggcgggcacggcgggcacggc 262 |||||||||||||||||||||| Sbjct: 667 cggcgggcacggcgggcacggc 646
>gb|AF267536.2| Takifugu rubripes NKX2.9 (nkx2.9) gene, exons 1 and 2 and complete cds; and Pax9 (pax9) gene, exons 1 through 4 and complete cds Length = 24431 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 260 ggcgggggcagggaccgggaccggga 285 |||||||||||||| ||||||||||| Sbjct: 22030 ggcgggggcagggagcgggaccggga 22005
>ref|XM_538483.2| PREDICTED: Canis familiaris similar to potassium channel, subfamily K, member 12 (LOC481362), mRNA Length = 1445 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 298 cggcggcggcagcggcggggcg 319 |||||||||||||||||||||| Sbjct: 69 cggcggcggcagcggcggggcg 48
>emb|CR732076.2|CNS0GRTD Tetraodon nigroviridis full-length cDNA Length = 1324 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 298 cggcggcggcagcggcggggcg 319 |||||||||||||||||||||| Sbjct: 1071 cggcggcggcagcggcggggcg 1050
>emb|AL451139.40| Human DNA sequence from clone RP11-569G9 on chromosome 1 Contains the 3' end of a novel gene (DKFZP434L0117), the SH3BGRL3 gene for SH3 domain binding glutamic acid-rich protein like 3, the gene for socius (SOC), the CDW52 gene for CDW52 antigen (CAMPATH-1 antigen), the AIM1L gene for absent in melanoma 1-like and a novel gene,, complete sequence Length = 145736 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 264 ggggcagggaccgggaccgggacagg 289 ||||| |||||||||||||||||||| Sbjct: 18784 ggggccgggaccgggaccgggacagg 18809
>emb|BX648412.1|HSM808560 Homo sapiens mRNA; cDNA DKFZp686H22235 (from clone DKFZp686H22235) Length = 2590 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 264 ggggcagggaccgggaccgggacagg 289 ||||| |||||||||||||||||||| Sbjct: 2442 ggggccgggaccgggaccgggacagg 2417
>gb|AF521018.1| Homo sapiens SOCIUS protein isoform 2 mRNA, complete cds Length = 1534 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 264 ggggcagggaccgggaccgggacagg 289 ||||| |||||||||||||||||||| Sbjct: 1444 ggggccgggaccgggaccgggacagg 1419
>gb|DQ385537.1| Psilotum nudum class III homeodomain-leucine zipper (C3HDZ1) gene, complete cds Length = 5927 Score = 44.1 bits (22), Expect = 0.38 Identities = 43/50 (86%) Strand = Plus / Plus Query: 359 gagcaggtggatgcgctggagcgcgtctacagcgagtgccccaagcccag 408 ||||||||||| ||||| ||||| |||||| ||||| ||||||||||| Sbjct: 70 gagcaggtggaggcgcttgagcgtctctacaatgagtgtcccaagcccag 119
>emb|CR749413.1| Homo sapiens mRNA; cDNA DKFZp686F04228 (from clone DKFZp686F04228) Length = 2759 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 264 ggggcagggaccgggaccgggacagg 289 ||||| |||||||||||||||||||| Sbjct: 2575 ggggccgggaccgggaccgggacagg 2550
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 302 ggcggcagcggcggggcgccgc 323 |||||||||||||||||||||| Sbjct: 1757762 ggcggcagcggcggggcgccgc 1757741
>gb|DQ385521.1| Psilotum nudum class III homeodomain-leucine zipper protein C3HDZ1 (C3HDZ1) mRNA, partial cds Length = 2482 Score = 44.1 bits (22), Expect = 0.38 Identities = 43/50 (86%) Strand = Plus / Plus Query: 359 gagcaggtggatgcgctggagcgcgtctacagcgagtgccccaagcccag 408 ||||||||||| ||||| ||||| |||||| ||||| ||||||||||| Sbjct: 70 gagcaggtggaggcgcttgagcgtctctacaatgagtgtcccaagcccag 119
>emb|CR625017.1| full-length cDNA clone CS0DK008YF07 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1745 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 264 ggggcagggaccgggaccgggacagg 289 ||||| |||||||||||||||||||| Sbjct: 1668 ggggccgggaccgggaccgggacagg 1643
>dbj|AK097368.1| Homo sapiens cDNA FLJ40049 fis, clone SYNOV2001708 Length = 1920 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 264 ggggcagggaccgggaccgggacagg 289 ||||| |||||||||||||||||||| Sbjct: 1845 ggggccgggaccgggaccgggacagg 1820
>emb|CR612365.1| full-length cDNA clone CS0DL007YI04 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1579 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 264 ggggcagggaccgggaccgggacagg 289 ||||| |||||||||||||||||||| Sbjct: 1544 ggggccgggaccgggaccgggacagg 1519
>dbj|AK094198.1| Homo sapiens cDNA FLJ36879 fis, clone BGGI11000193 Length = 2278 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 264 ggggcagggaccgggaccgggacagg 289 ||||| |||||||||||||||||||| Sbjct: 1199 ggggccgggaccgggaccgggacagg 1174
>dbj|AK093258.1| Homo sapiens cDNA FLJ35939 fis, clone TESTI2011605 Length = 1771 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 264 ggggcagggaccgggaccgggacagg 289 ||||| |||||||||||||||||||| Sbjct: 1696 ggggccgggaccgggaccgggacagg 1671
>emb|CR590200.1| full-length cDNA clone CS0DL011YH08 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1818 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 264 ggggcagggaccgggaccgggacagg 289 ||||| |||||||||||||||||||| Sbjct: 1803 ggggccgggaccgggaccgggacagg 1778
>gb|AC124316.32| Mus musculus chromosome 17, clone RP24-222O13, complete sequence Length = 223552 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 298 cggcggcggcagcggcggggcg 319 |||||||||||||||||||||| Sbjct: 83092 cggcggcggcagcggcggggcg 83113
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.38 Identities = 52/62 (83%) Strand = Plus / Plus Query: 344 gtgcgctacacccccgagcaggtggatgcgctggagcgcgtctacagcgagtgccccaag 403 |||| |||||| || ||||||||||| ||||| ||||| || || | ||| ||||||||| Sbjct: 20463304 gtgcactacacgcctgagcaggtggaggcgcttgagcgggtgtataccgattgccccaag 20463363 Query: 404 cc 405 || Sbjct: 20463364 cc 20463365 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 cggcggcggcagcggcgggg 317 |||||||||||||||||||| Sbjct: 23641050 cggcggcggcagcggcgggg 23641069
>gb|AF287300.1|AF287300 Rattus norvegicus tandem pore domain potassium channel THIK-2 (Kcnk12) mRNA, complete cds Length = 1900 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 298 cggcggcggcagcggcggggcg 319 |||||||||||||||||||||| Sbjct: 536 cggcggcggcagcggcggggcg 515
>ref|NM_022292.1| Rattus norvegicus potassium channel, subfamily K, member 12 (Kcnk12), mRNA Length = 1900 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 298 cggcggcggcagcggcggggcg 319 |||||||||||||||||||||| Sbjct: 536 cggcggcggcagcggcggggcg 515
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 241 cggcgggcacggcgggcacggc 262 |||||||||||||||||||||| Sbjct: 4233510 cggcgggcacggcgggcacggc 4233489 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 241 cggcgggcacggcgggcacggcgggggc 268 ||||||| ||||||| |||||||||||| Sbjct: 5098577 cggcgggtacggcggccacggcgggggc 5098550 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 cacggcgggcacggcgggca 258 |||||||||||||||||||| Sbjct: 451305 cacggcgggcacggcgggca 451286
>ref|NM_199251.1| Mus musculus potassium channel, subfamily K, member 12 (Kcnk12), mRNA Length = 1952 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 298 cggcggcggcagcggcggggcg 319 |||||||||||||||||||||| Sbjct: 587 cggcggcggcagcggcggggcg 566
>gb|AY007163.1| Homo sapiens clone CDABP0155 mRNA sequence Length = 1295 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 264 ggggcagggaccgggaccgggacagg 289 ||||| |||||||||||||||||||| Sbjct: 1211 ggggccgggaccgggaccgggacagg 1186
>emb|BX647774.1|HSM807920 Homo sapiens mRNA; cDNA DKFZp686O1259 (from clone DKFZp686O1259) Length = 2701 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 264 ggggcagggaccgggaccgggacagg 289 ||||| |||||||||||||||||||| Sbjct: 2541 ggggccgggaccgggaccgggacagg 2516
>dbj|AB052939.1| Mus musculus mntk1 mRNA, complete cds Length = 1952 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 298 cggcggcggcagcggcggggcg 319 |||||||||||||||||||||| Sbjct: 587 cggcggcggcagcggcggggcg 566
>dbj|AP004463.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0456B03 Length = 152973 Score = 44.1 bits (22), Expect = 0.38 Identities = 52/62 (83%) Strand = Plus / Plus Query: 344 gtgcgctacacccccgagcaggtggatgcgctggagcgcgtctacagcgagtgccccaag 403 |||| |||||| || ||||||||||| ||||| ||||| || || | ||| ||||||||| Sbjct: 93934 gtgcactacacgcctgagcaggtggaggcgcttgagcgggtgtataccgattgccccaag 93993 Query: 404 cc 405 || Sbjct: 93994 cc 93995
>dbj|AK074358.1| Homo sapiens cDNA FLJ23778 fis, clone HEP20701 Length = 2431 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 264 ggggcagggaccgggaccgggacagg 289 ||||| |||||||||||||||||||| Sbjct: 2261 ggggccgggaccgggaccgggacagg 2236
>gb|BC066002.1| Mus musculus cDNA sequence BC024479, mRNA (cDNA clone MGC:90123 IMAGE:5701381), complete cds Length = 2307 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 293 tcgcccggcggcggcagcggcggggc 318 ||||||||||||||||| |||||||| Sbjct: 250 tcgcccggcggcggcagtggcggggc 275
>gb|AC073435.26| Mus musculus strain C57BL/6J chromosome 9 clone rp23-383h20, complete sequence Length = 221953 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 293 tcgcccggcggcggcagcggcggggc 318 ||||||||||||||||| |||||||| Sbjct: 213784 tcgcccggcggcggcagtggcggggc 213759
>dbj|AU066557.1| Chlamydomonas sp. HS-5 mRNA for hypothetical protein, paraquat inducible, complete cds, clone:PQ2 Length = 665 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 298 cggcggcggcagcggcggggcg 319 |||||||||||||||||||||| Sbjct: 172 cggcggcggcagcggcggggcg 193
>gb|BC108558.1| Xenopus laevis cDNA clone MGC:131026 IMAGE:7980196, complete cds Length = 1403 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 cggcgggggcagggaccgggaccgg 283 |||||| |||||||||||||||||| Sbjct: 740 cggcggcggcagggaccgggaccgg 764
>gb|AC108762.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone OSJNBb0052C07, complete sequence Length = 154528 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 298 cggcggcggcagcggcggggc 318 ||||||||||||||||||||| Sbjct: 81706 cggcggcggcagcggcggggc 81686 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 ccggcggcggcagcggcggg 316 |||||||||||||||||||| Sbjct: 142906 ccggcggcggcagcggcggg 142887
>ref|XM_479146.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1816 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 295 gcccggcggcggcagcggcgg 315 ||||||||||||||||||||| Sbjct: 1399 gcccggcggcggcagcggcgg 1419
>gb|AC161812.3| Mus musculus chromosome 15, clone RP23-195I24, complete sequence Length = 204464 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 262 cgggggcagggaccgggaccgggac 286 ||||||| ||||||||||||||||| Sbjct: 176991 cgggggcggggaccgggaccgggac 176967
>ref|XM_868865.1| PREDICTED: Bos taurus similar to FAS-associated factor 1 (FAF1 protein) (LOC616759), partial mRNA Length = 1156 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 294 cgcccggcggcggcagcggcg 314 ||||||||||||||||||||| Sbjct: 1 cgcccggcggcggcagcggcg 21
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 304 cggcagcggcggggcgccgca 324 ||||||||||||||||||||| Sbjct: 522911 cggcagcggcggggcgccgca 522931
>ref|XM_751805.1| Ustilago maydis 521 hypothetical protein (UM00751.1) partial mRNA Length = 5733 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 299 ggcggcggcagcggcggggcg 319 ||||||||||||||||||||| Sbjct: 5530 ggcggcggcagcggcggggcg 5550
>ref|XM_532944.2| PREDICTED: Canis familiaris hypothetical LOC130733 (LOC475737), mRNA Length = 1850 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 295 gcccggcggcggcagcggcggggcg 319 ||||||||||||| ||||||||||| Sbjct: 179 gcccggcggcggccgcggcggggcg 203
>ref|XM_538738.2| PREDICTED: Canis familiaris similar to Exosome complex exonuclease RRP40 (Ribosomal RNA processing protein 40) (Exosome component 3) (p10) (LOC481616), mRNA Length = 1100 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 295 gcccggcggcggcagcggcgg 315 ||||||||||||||||||||| Sbjct: 270 gcccggcggcggcagcggcgg 290
>emb|AL590233.23| Human DNA sequence from clone RP13-93L13 on chromosome 9 Contains a ubiquitin-conjugating enzyme E2 pseudogene, a proliferation-associated 2G4, 38kDa (PA2G4) pseuodgene, the 5' end of the SEMA4D gene for sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D and a CpG island, complete sequence Length = 109008 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 295 gcccggcggcggcagcggcgg 315 ||||||||||||||||||||| Sbjct: 4358 gcccggcggcggcagcggcgg 4338
>emb|BX023094.1|CNS08PZE Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA35BC07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 103 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 261 gcgggggcagggaccgggaccgggacagg 289 |||||| |||||||||| ||||||||||| Sbjct: 63 gcggggacagggaccggcaccgggacagg 35
>emb|BX572596.1| Rhodopseudomonas palustris CGA009 complete genome; segment 4/16 Length = 348942 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 242 ggcgggcacggcgggcacggcgggg 266 |||||||||| |||||||||||||| Sbjct: 86179 ggcgggcacgccgggcacggcgggg 86155
>gb|AC104834.4| Mus Musculus Strain C57BL6/J Chromosome 15 RP23-274F23, complete sequence Length = 215113 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 262 cgggggcagggaccgggaccgggac 286 ||||||| ||||||||||||||||| Sbjct: 103042 cgggggcggggaccgggaccgggac 103066
>gb|AE005750.1| Caulobacter crescentus CB15 section 76 of 359 of the complete genome Length = 11605 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 300 gcggcggcagcggcggggcgccgcaggtg 328 |||||||| |||||||||||||| ||||| Sbjct: 7578 gcggcggcggcggcggggcgccgaaggtg 7550
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 297 ccggcggcggcagcggcggggcgccgcag 325 ||||||||||| ||||||||||| ||||| Sbjct: 1455478 ccggcggcggcggcggcggggcggcgcag 1455506
>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence Length = 1466886 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 241 cggcgggcacggcgggcacggcggg 265 ||||||||||||||||| ||||||| Sbjct: 980234 cggcgggcacggcgggcgcggcggg 980258
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 295 gcccggcggcggcagcggcgg 315 ||||||||||||||||||||| Sbjct: 4693245 gcccggcggcggcagcggcgg 4693265 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 297 ccggcggcggcagcggcggggcgc 320 ||||||||||| |||||||||||| Sbjct: 22338351 ccggcggcggcggcggcggggcgc 22338328
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 295 gcccggcggcggcagcggcgg 315 ||||||||||||||||||||| Sbjct: 25205964 gcccggcggcggcagcggcgg 25205984 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 cggcggcggcagcggcgggg 317 |||||||||||||||||||| Sbjct: 25219951 cggcggcggcagcggcgggg 25219970 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 297 ccggcggcggcagcggcggggcgc 320 ||||||||||| |||||||||||| Sbjct: 20736884 ccggcggcggcggcggcggggcgc 20736861
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 298 cggcggcggcagcggcggggcgccg 322 |||||||||||||||||| |||||| Sbjct: 6532382 cggcggcggcagcggcggcgcgccg 6532358 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 cggcggcggcagcggcgggg 317 |||||||||||||||||||| Sbjct: 3926126 cggcggcggcagcggcgggg 3926107
>gb|AC156445.2| Volvox carteri clone JGIAOBO-25P15, complete sequence Length = 31713 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 295 gcccggcggcggcagcggcgg 315 ||||||||||||||||||||| Sbjct: 7577 gcccggcggcggcagcggcgg 7597
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 243 gcgggcacggcgggcacggcg 263 ||||||||||||||||||||| Sbjct: 313189 gcgggcacggcgggcacggcg 313169
>dbj|AP006446.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1097H10 Length = 159732 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 295 gcccggcggcggcagcggcgg 315 ||||||||||||||||||||| Sbjct: 10849 gcccggcggcggcagcggcgg 10869
>dbj|AP005198.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0616D06 Length = 153800 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 295 gcccggcggcggcagcggcgg 315 ||||||||||||||||||||| Sbjct: 22635 gcccggcggcggcagcggcgg 22655 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 cggcggcggcagcggcgggg 317 |||||||||||||||||||| Sbjct: 36622 cggcggcggcagcggcgggg 36641
>dbj|AP005846.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1307A11 Length = 131538 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 298 cggcggcggcagcggcggggcgccg 322 |||||||||||||||||| |||||| Sbjct: 92995 cggcggcggcagcggcggcgcgccg 92971
>dbj|AK071281.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086E05, full insert sequence Length = 1817 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 295 gcccggcggcggcagcggcgg 315 ||||||||||||||||||||| Sbjct: 1400 gcccggcggcggcagcggcgg 1420
>dbj|AK064834.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000F19, full insert sequence Length = 1601 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 298 cggcggcggcagcggcggggc 318 ||||||||||||||||||||| Sbjct: 475 cggcggcggcagcggcggggc 455
>dbj|AK062257.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-G09, full insert sequence Length = 1508 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 298 cggcggcggcagcggcggggc 318 ||||||||||||||||||||| Sbjct: 531 cggcggcggcagcggcggggc 511
>dbj|AB013791.1| Ceratopteris richardii mRNA for CRHB1, partial cds Length = 765 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 422 cagcagctcatacgcgagtgc 442 ||||||||||||||||||||| Sbjct: 143 cagcagctcatacgcgagtgc 163
>ref|NM_187946.1| Oryza sativa (japonica cultivar-group), Ozsa8366 predicted mRNA Length = 885 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 cccggcggcggcagcggcgg 315 |||||||||||||||||||| Sbjct: 455 cccggcggcggcagcggcgg 436
>ref|XM_482973.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1880 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 cggcggcggcagcggcgggg 317 |||||||||||||||||||| Sbjct: 285 cggcggcggcagcggcgggg 304
>ref|XM_475190.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1158 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 296 cccggcggcggcagcggcggggcg 319 |||||||||||| ||||||||||| Sbjct: 428 cccggcggcggcggcggcggggcg 405
>ref|XM_530793.1| PREDICTED: Pan troglodytes LOC461754 (LOC461754), mRNA Length = 1917 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 cccggcggcggcagcggcgg 315 |||||||||||||||||||| Sbjct: 55 cccggcggcggcagcggcgg 36
>ref|NM_197811.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0057L21.6), mRNA Length = 2076 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 300 gcggcggcagcggcggggcgccgc 323 ||||||||||||| |||||||||| Sbjct: 1104 gcggcggcagcgggggggcgccgc 1081
>ref|NM_195943.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0023M11.12), mRNA Length = 972 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 cggcggcggcagcggcgggg 317 |||||||||||||||||||| Sbjct: 162 cggcggcggcagcggcgggg 181
>gb|BT017144.1| Zea mays clone EL01N0366F12.c mRNA sequence Length = 1174 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 cccggcggcggcagcggcgg 315 |||||||||||||||||||| Sbjct: 827 cccggcggcggcagcggcgg 808
>ref|NM_001007595.1| Homo sapiens nuclear localized factor 2 (NLF2), mRNA Length = 1329 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 302 ggcggcagcggcggggcgccgcag 325 ||||||||||||||||| |||||| Sbjct: 655 ggcggcagcggcggggccccgcag 632
>ref|XM_469706.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1731 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 297 ccggcggcggcagcggcggggcgc 320 ||||||||||| |||||||||||| Sbjct: 379 ccggcggcggcggcggcggggcgc 356
>ref|XM_470403.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1631 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 ccggcggcggcagcggcggg 316 |||||||||||||||||||| Sbjct: 1111 ccggcggcggcagcggcggg 1092
>ref|XM_479147.1| Oryza sativa (japonica cultivar-group), mRNA Length = 492 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 cggcggcggcagcggcgggg 317 |||||||||||||||||||| Sbjct: 345 cggcggcggcagcggcgggg 326
>ref|XM_478529.1| Oryza sativa (japonica cultivar-group), mRNA Length = 871 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 297 ccggcggcggcagcggcggggcgc 320 ||||||||||| |||||||||||| Sbjct: 245 ccggcggcggcggcggcggggcgc 268
>ref|XM_513752.1| PREDICTED: Pan troglodytes B-cell CLL/lymphoma 9 (LOC457248), mRNA Length = 4684 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 cccggcggcggcagcggcgg 315 |||||||||||||||||||| Sbjct: 21 cccggcggcggcagcggcgg 2
>gb|AC108758.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0066E19, complete sequence Length = 145575 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 ccggcggcggcagcggcggg 316 |||||||||||||||||||| Sbjct: 126445 ccggcggcggcagcggcggg 126464
>gb|AF411339.1| Homo sapiens brain-derived neurotrophic factor opposite strand (BDNFOS) gene, partial sequence; and brain-derived neurotrophic factor (BDNF) gene, complete cds Length = 115886 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 cggcggcggcagcggcgggg 317 |||||||||||||||||||| Sbjct: 53391 cggcggcggcagcggcgggg 53372
>gb|AC135421.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0012G21, complete sequence Length = 135750 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 ccggcggcggcagcggcggg 316 |||||||||||||||||||| Sbjct: 30796 ccggcggcggcagcggcggg 30815
>ref|XM_424089.1| PREDICTED: Gallus gallus similar to cytoplasmic activation/proliferation-associated protein 1; caprin-1 (LOC426445), partial mRNA Length = 1652 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 cccggcggcggcagcggcgg 315 |||||||||||||||||||| Sbjct: 538 cccggcggcggcagcggcgg 557
>gb|AC124327.9| Mus musculus chromosome 8, clone RP24-490I13, complete sequence Length = 141781 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 cggcggcggcagcggcgggg 317 |||||||||||||||||||| Sbjct: 94326 cggcggcggcagcggcgggg 94345
>ref|XM_594925.2| PREDICTED: Bos taurus similar to acyl-Coenzyme A binding domain containing 3 (LOC516766), mRNA Length = 1185 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 298 cggcggcggcagcggcggggcgcc 321 ||||||||||||| |||||||||| Sbjct: 873 cggcggcggcagcagcggggcgcc 850
>gb|AY463276.1| Uncultured proteobacterium clone FOR14 carbon monoxide dehydrogenase form I large subunit (coxL) gene, partial cds Length = 448 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 gaccctggccctggctcatc 152 |||||||||||||||||||| Sbjct: 427 gaccctggccctggctcatc 408
>ref|XM_582194.2| PREDICTED: Bos taurus similar to Homeobox protein Hox-C13 (Hox-3G), transcript variant 1 (LOC538716), mRNA Length = 1074 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 cggcggcggcagcggcgggg 317 |||||||||||||||||||| Sbjct: 85 cggcggcggcagcggcgggg 104
>ref|NM_144831.2| Mus musculus DEAH (Asp-Glu-Ala-His) box polypeptide 8 (Dhx8), mRNA Length = 4344 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 gggaccgggaccgggacagg 289 |||||||||||||||||||| Sbjct: 660 gggaccgggaccgggacagg 679
>ref|XM_580301.2| PREDICTED: Bos taurus similar to adenylate cyclase 5 (LOC538432), mRNA Length = 1701 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 cggcggcagcggcggggcgc 320 |||||||||||||||||||| Sbjct: 886 cggcggcagcggcggggcgc 905
>ref|NM_011141.1| Mus musculus POU domain, class 3, transcription factor 1 (Pou3f1), mRNA Length = 1517 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 299 ggcggcggcagcggcggggcgccgcagg 326 ||||||||| ||||||||||| |||||| Sbjct: 15 ggcggcggcggcggcggggcggcgcagg 42
>ref|NM_172755.2| Mus musculus splicing factor, arginine/serine-rich 14 (Sfrs14), mRNA Length = 3891 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 cggcggcggcagcggcgggg 317 |||||||||||||||||||| Sbjct: 375 cggcggcggcagcggcgggg 394
>gb|BC045986.1| Danio rerio makorin, ring finger protein, 2, mRNA (cDNA clone MGC:56198 IMAGE:5600186), complete cds Length = 1519 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 cccggcggcggcagcggcgg 315 |||||||||||||||||||| Sbjct: 539 cccggcggcggcagcggcgg 520
>ref|NM_194268.1| Mus musculus one cut domain, family member 2 (Onecut2), mRNA Length = 1664 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 cggcggcggcagcggcgggg 317 |||||||||||||||||||| Sbjct: 124 cggcggcggcagcggcgggg 143
>ref|NM_005811.2| Homo sapiens growth differentiation factor 11 (GDF11), mRNA Length = 1662 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 cggcggcggcagcggcgggg 317 |||||||||||||||||||| Sbjct: 145 cggcggcggcagcggcgggg 164
>gb|AY745194.1| Gallus gallus cytoplasmic activation- proliferation-associated protein 1 mRNA, complete cds Length = 2109 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 cccggcggcggcagcggcgg 315 |||||||||||||||||||| Sbjct: 72 cccggcggcggcagcggcgg 91
>gb|BC065064.1| Mus musculus DEAH (Asp-Glu-Ala-His) box polypeptide 8, mRNA (cDNA clone IMAGE:6401091), partial cds Length = 4283 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 gggaccgggaccgggacagg 289 |||||||||||||||||||| Sbjct: 589 gggaccgggaccgggacagg 608
>gb|AY264920.1| Ovis aries homeo box C13 (Hoxc13) gene, exon 1 and partial cds Length = 1861 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 cggcggcggcagcggcgggg 317 |||||||||||||||||||| Sbjct: 1211 cggcggcggcagcggcgggg 1230
>gb|BC065352.1| Danio rerio makorin, ring finger protein, 2, mRNA (cDNA clone MGC:77393 IMAGE:6969527), complete cds Length = 2004 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 cccggcggcggcagcggcgg 315 |||||||||||||||||||| Sbjct: 527 cccggcggcggcagcggcgg 508
>gb|AC092852.6| Oryza sativa chromosome 3 BAC OSJNBa0032G11 genomic sequence, complete sequence Length = 156606 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 ccggcggcggcagcggcggg 316 |||||||||||||||||||| Sbjct: 134944 ccggcggcggcagcggcggg 134963
>ref|XM_001001997.1| PREDICTED: Mus musculus hypothetical protein LOC668520 (LOC668520), mRNA Length = 792 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 cccggcggcggcagcggcgg 315 |||||||||||||||||||| Sbjct: 377 cccggcggcggcagcggcgg 396
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gcggcggggcgccgcaggtg 328 |||||||||||||||||||| Sbjct: 1682970 gcggcggggcgccgcaggtg 1682989
>ref|XM_533770.2| PREDICTED: Canis familiaris similar to Membrane associated guanylate kinase, WW and PDZ domain containing protein 1 (BAI1-associated protein 1) (BAP-1) (Membrane associated guanylate kinase inverted-1) (MAGI-1) (Atrophin-1 interacting protein 3) (AIP3) (WW domain-containing p... (LOC476565), mRNA Length = 4782 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 gggaccgggaccgggacagg 289 |||||||||||||||||||| Sbjct: 4478 gggaccgggaccgggacagg 4497
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 gagcaggtggatgcgctgga 378 |||||||||||||||||||| Sbjct: 757802 gagcaggtggatgcgctgga 757821
>gb|BC085956.1| Rattus norvegicus zinc finger, AN1-type domain 3, mRNA (cDNA clone MGC:95308 IMAGE:7134959), complete cds Length = 2617 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 cggcggcggcagcggcgggg 317 |||||||||||||||||||| Sbjct: 33 cggcggcggcagcggcgggg 14
>gb|AC130550.4| Mus musculus BAC clone RP24-463N15 from chromosome 7, complete sequence Length = 152908 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctttcccttcccttccatcc 20 |||||||||||||||||||| Sbjct: 143518 ctttcccttcccttccatcc 143537
>gb|AC106818.2| Homo sapiens chromosome 5 clone RP11-65F13, complete sequence Length = 180056 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 cccggcggcggcagcggcgg 315 |||||||||||||||||||| Sbjct: 48649 cccggcggcggcagcggcgg 48668
>gb|BC057305.1| Mus musculus splicing factor, arginine/serine-rich 14, mRNA (cDNA clone MGC:66544 IMAGE:6822887), complete cds Length = 4296 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 cggcggcggcagcggcgggg 317 |||||||||||||||||||| Sbjct: 35 cggcggcggcagcggcgggg 54
>gb|AC117188.3| Mus musculus BAC clone RP23-42E3 from 1, complete sequence Length = 226443 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 cccggcggcggcagcggcgg 315 |||||||||||||||||||| Sbjct: 154334 cccggcggcggcagcggcgg 154353
>gb|AC098886.4| Mus musculus BAC clone RP23-122M21 from 4, complete sequence Length = 219825 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 299 ggcggcggcagcggcggggcgccgcagg 326 ||||||||| ||||||||||| |||||| Sbjct: 113991 ggcggcggcggcggcggggcggcgcagg 113964
>gb|AC122004.2| Mus musculus BAC clone RP24-337O4 from 18, complete sequence Length = 133247 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 262 cgggggcagggaccgggaccgggacagg 289 ||||||||||||| ||||| |||||||| Sbjct: 56086 cgggggcagggacagggacagggacagg 56059
>gb|BC057390.1| Homo sapiens Ras-induced senescence 1, mRNA (cDNA clone MGC:57838 IMAGE:6175193), complete cds Length = 1798 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 cggcggcggcagcggcgggg 317 |||||||||||||||||||| Sbjct: 1077 cggcggcggcagcggcgggg 1058
>ref|NM_001012175.1| Rattus norvegicus zinc finger, AN1-type domain 3 (Zfand3), mRNA Length = 2617 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 cggcggcggcagcggcgggg 317 |||||||||||||||||||| Sbjct: 33 cggcggcggcagcggcgggg 14
>gb|BC057181.1| Mus musculus cDNA clone IMAGE:5038990, partial cds Length = 1848 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 gtgcacggcgggcacggcgg 255 |||||||||||||||||||| Sbjct: 222 gtgcacggcgggcacggcgg 203
>emb|CR956634.3| Pig DNA sequence from clone CH242-277I8 on chromosome 17, complete sequence Length = 206278 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 ggcggcggcagcggcggggc 318 |||||||||||||||||||| Sbjct: 98539 ggcggcggcagcggcggggc 98520
>gb|AY242995.1| Mus musculus transcription factor ONECUT2 (Oc2) mRNA, complete cds Length = 1664 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 cggcggcggcagcggcgggg 317 |||||||||||||||||||| Sbjct: 124 cggcggcggcagcggcgggg 143
>gb|BC018089.1| Homo sapiens hypothetical gene supported by AK124699, mRNA (cDNA clone IMAGE:4798404) Length = 992 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 cccggcggcggcagcggcgg 315 |||||||||||||||||||| Sbjct: 24 cccggcggcggcagcggcgg 5
>gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, complete sequence Length = 1471779 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 ccccgagcaggtggatgcgc 374 |||||||||||||||||||| Sbjct: 1251351 ccccgagcaggtggatgcgc 1251370
>gb|AY341860.1| Oryza sativa (japonica cultivar-group) WRKY20 mRNA, complete cds Length = 1630 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 gaggcggcgcgcggagggca 120 |||||||||||||||||||| Sbjct: 478 gaggcggcgcgcggagggca 459
>gb|AC092554.3| Papio anubis clone RP41-414G17, complete sequence Length = 167543 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 gcggcggcagcggcggggcg 319 |||||||||||||||||||| Sbjct: 33871 gcggcggcagcggcggggcg 33852
>gb|AC120049.5| Homo sapiens chromosome 18, clone RP11-456K23, complete sequence Length = 125488 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 ggaggcggcgcgcggagggc 119 |||||||||||||||||||| Sbjct: 84872 ggaggcggcgcgcggagggc 84853
>emb|BX067985.1|CNS09OMD Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC51DH12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 851 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 cccggcggcggcagcggcgg 315 |||||||||||||||||||| Sbjct: 848 cccggcggcggcagcggcgg 829
>emb|Z29371.1|OCMRADCYV O.cuniculus mRNA for adenylyl cyclase type V Length = 4995 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 cggcggcagcggcggggcgc 320 |||||||||||||||||||| Sbjct: 940 cggcggcagcggcggggcgc 959
>emb|X98515.1|SPSNBAGEN S.pristinaespiralis snbA gene Length = 1879 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 ggcgggcacggcgggcacgg 261 |||||||||||||||||||| Sbjct: 566 ggcgggcacggcgggcacgg 547
>emb|X78335.1|GGRARA21 Gallus gallus retinoic acid receptor alpha isoform 2-1 mRNA Length = 1494 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 gcgctacacccccgagcagg 365 |||||||||||||||||||| Sbjct: 813 gcgctacacccccgagcagg 832
>emb|X73972.1|GGRARA1 G.gallus RAR-alpha1 mRNA for retinoic acid receptor Length = 1552 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 gcgctacacccccgagcagg 365 |||||||||||||||||||| Sbjct: 882 gcgctacacccccgagcagg 901
>emb|X54628.1|MMOCT6GR M. musculus oct6 gene for the octamer binding factor oct6 Length = 1517 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 299 ggcggcggcagcggcggggcgccgcagg 326 ||||||||| ||||||||||| |||||| Sbjct: 15 ggcggcggcggcggcggggcggcgcagg 42
>gb|AC103796.3| Homo sapiens chromosome 11, clone RP11-1033A18, complete sequence Length = 211799 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 cggcggcggcagcggcgggg 317 |||||||||||||||||||| Sbjct: 3881 cggcggcggcagcggcgggg 3900
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 cgcccggcggcggcagcggc 313 |||||||||||||||||||| Sbjct: 804046 cgcccggcggcggcagcggc 804065
>emb|BX640449.1| Bordetella bronchiseptica strain RB50, complete genome; segment 13/16 Length = 348074 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 ggcggcagcggcggggcgcc 321 |||||||||||||||||||| Sbjct: 314700 ggcggcagcggcggggcgcc 314681
>emb|BX640434.1| Bordetella parapertussis strain 12822, complete genome; segment 12/14 Length = 344805 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 ggcggcagcggcggggcgcc 321 |||||||||||||||||||| Sbjct: 258590 ggcggcagcggcggggcgcc 258571
>emb|BX640420.1| Bordetella pertussis strain Tohama I, complete genome; segment 10/12 Length = 348134 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 ggcggcagcggcggggcgcc 321 |||||||||||||||||||| Sbjct: 114338 ggcggcagcggcggggcgcc 114319
>emb|AJ251217.1|PSP251217 Pseudomonas sp. B4 gene encoding putative transposase, ORF0 and ORF1 DNA, bphA1, bphA2, bphA3 and bphA4 genes Length = 6012 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 ccccgagcaggtggatgcgc 374 |||||||||||||||||||| Sbjct: 4888 ccccgagcaggtggatgcgc 4869
>emb|AJ720561.1| Gallus gallus mRNA for hypothetical protein, clone 20e8 Length = 2247 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 gcccggcggcggcagcggcg 314 |||||||||||||||||||| Sbjct: 264 gcccggcggcggcagcggcg 283
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 124 cgcggcggcgaccctggccctggc 147 ||||||| |||||||||||||||| Sbjct: 2536868 cgcggcgtcgaccctggccctggc 2536845
>gb|AC090668.7| Homo sapiens 12 BAC RP11-791O13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 111375 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 ctggccctggctcatcctct 156 |||||||||||||||||||| Sbjct: 107174 ctggccctggctcatcctct 107155
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 cggcggcagcggcggggcgc 320 |||||||||||||||||||| Sbjct: 270122 cggcggcagcggcggggcgc 270141
>gb|AE006022.1| Caulobacter crescentus CB15 section 348 of 359 of the complete genome Length = 10637 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 gcggcgaccctggccctggc 147 |||||||||||||||||||| Sbjct: 5383 gcggcgaccctggccctggc 5364
>dbj|AK095719.1| Homo sapiens cDNA FLJ38400 fis, clone FEBRA2008159 Length = 2869 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 cccggcggcggcagcggcgg 315 |||||||||||||||||||| Sbjct: 25 cccggcggcggcagcggcgg 6
>emb|CR611917.1| full-length cDNA clone CS0DI082YG05 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1147 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 cggcggcggcagcggcgggg 317 |||||||||||||||||||| Sbjct: 112 cggcggcggcagcggcgggg 131
>gb|AC107988.4| Homo sapiens chromosome 18, clone CTC-346I21, complete sequence Length = 116247 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 ggaggcggcgcgcggagggc 119 |||||||||||||||||||| Sbjct: 4714 ggaggcggcgcgcggagggc 4733
>tpg|BK005060.1| TPA: TPA_inf: Oryza sativa (indica cultivar-group) WRKY transcription factor 57 (WRKY57) gene, complete cds Length = 3018 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 gaggcggcgcgcggagggca 120 |||||||||||||||||||| Sbjct: 429 gaggcggcgcgcggagggca 410
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 tccacgggaggcggcgcgcg 113 |||||||||||||||||||| Sbjct: 951617 tccacgggaggcggcgcgcg 951636
>gb|AC077693.19| Oryza sativa chromosome 10 BAC OSJNBa0095C07 genomic sequence, complete sequence Length = 187707 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 300 gcggcggcagcggcggggcgccgc 323 ||||||||||||| |||||||||| Sbjct: 6228 gcggcggcagcgggggggcgccgc 6251
>gb|AC084320.10| Oryza sativa chromosome 3 BAC OSJNBa0091J19 genomic sequence, complete sequence Length = 178158 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 cggcggcggcagcggcgggg 317 |||||||||||||||||||| Sbjct: 63008 cggcggcggcagcggcgggg 62989
>gb|AC069300.7| Oryza sativa chromosome 10 BAC OSJNBa0010C11 genomic sequence, complete sequence Length = 147117 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 cggcggcggcagcggcgggg 317 |||||||||||||||||||| Sbjct: 63277 cggcggcggcagcggcgggg 63258
>dbj|AB094101.1| Betula maximowicziana DNA, microsatellite Bmax630 Length = 232 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 cggcggcggcagcggcgggg 317 |||||||||||||||||||| Sbjct: 196 cggcggcggcagcggcgggg 215
>gb|AC092749.1| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OSJNBb0023M11, from chromosome 10, complete sequence Length = 138668 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 cggcggcggcagcggcgggg 317 |||||||||||||||||||| Sbjct: 59780 cggcggcggcagcggcgggg 59761
>gb|AC087599.14| Oryza sativa chromosome 10 BAC OSJNBa0057L21 genomic sequence, complete sequence Length = 183046 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 300 gcggcggcagcggcggggcgccgc 323 ||||||||||||| |||||||||| Sbjct: 6637 gcggcggcagcgggggggcgccgc 6614
>dbj|AK142226.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched library, clone:D330014J18 product:DEAH (Asp-Glu-Ala-His) box polypeptide 8, full insert sequence Length = 4250 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 gggaccgggaccgggacagg 289 |||||||||||||||||||| Sbjct: 594 gggaccgggaccgggacagg 613
>gb|AY660573.1| Oryza sativa (japonica cultivar-group) cultivar TP309 putative D type cyclin gene, partial cds Length = 1036 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 cggcggcggcagcggcgggg 317 |||||||||||||||||||| Sbjct: 623 cggcggcggcagcggcgggg 642
>dbj|AK148316.1| Mus musculus B16 F10Y cells cDNA, RIKEN full-length enriched library, clone:G370087H04 product:testis expressed gene 27, full insert sequence Length = 3450 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 cggcggcggcagcggcgggg 317 |||||||||||||||||||| Sbjct: 79 cggcggcggcagcggcgggg 60
>dbj|AK147659.1| Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN full-length enriched library, clone:M5C1102K16 product:B-cell CLL/lymphoma 9, full insert sequence Length = 6103 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 cccggcggcggcagcggcgg 315 |||||||||||||||||||| Sbjct: 34 cccggcggcggcagcggcgg 15
>dbj|AK155423.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630226D05 product:growth factor receptor bound protein 2-associated protein 1, full insert sequence Length = 4864 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 gtgcacggcgggcacggcgg 255 |||||||||||||||||||| Sbjct: 822 gtgcacggcgggcacggcgg 803
>ref|XM_942917.1| PREDICTED: Homo sapiens hypothetical protein LOC647650 (LOC647650), mRNA Length = 1053 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 cccggcggcggcagcggcgg 315 |||||||||||||||||||| Sbjct: 507 cccggcggcggcagcggcgg 488
>ref|XM_932488.1| PREDICTED: Homo sapiens hypothetical protein LOC644880 (LOC644880), mRNA Length = 1242 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 cccggcggcggcagcggcgg 315 |||||||||||||||||||| Sbjct: 696 cccggcggcggcagcggcgg 677
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ggcacggcgggcacggcggg 265 |||||||||||||||||||| Sbjct: 2665025 ggcacggcgggcacggcggg 2665006 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 gcacggcgggcacggcgggc 257 |||||||||||||||||||| Sbjct: 2665024 gcacggcgggcacggcgggc 2665005
>dbj|AK170616.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630110L04 product:DEAH (Asp-Glu-Ala-His) box polypeptide 8, full insert sequence Length = 4245 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 gggaccgggaccgggacagg 289 |||||||||||||||||||| Sbjct: 588 gggaccgggaccgggacagg 607
>gb|AC151294.3| Mus musculus BAC clone RP23-137I7 from chromosome 17, complete sequence Length = 206868 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 cggcggcggcagcggcgggg 317 |||||||||||||||||||| Sbjct: 199661 cggcggcggcagcggcgggg 199642
>gb|AC021766.6| Homo sapiens, clone RP11-9H20, complete sequence Length = 151558 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 ggaggcggcgcgcggagggc 119 |||||||||||||||||||| Sbjct: 33781 ggaggcggcgcgcggagggc 33762
>gb|AC092558.4| Oryza sativa chromosome 3 BAC OSJNBb0036F07 genomic sequence, complete sequence Length = 130359 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 297 ccggcggcggcagcggcggggcgc 320 ||||||||||| |||||||||||| Sbjct: 114997 ccggcggcggcggcggcggggcgc 115020
>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence Length = 1519138 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 245 gggcacggcgggcacggcgggggc 268 ||||| |||||||||||||||||| Sbjct: 1247351 gggcatggcgggcacggcgggggc 1247374
>dbj|AK077951.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length enriched library, clone:6030458K23 product:similar to CHOLINE TRANSPORTER-LIKE PROTEIN 1, SPLICE VARIANT A [Rattus norvegicus], full insert sequence Length = 1941 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 cccggcggcggcagcggcgg 315 |||||||||||||||||||| Sbjct: 80 cccggcggcggcagcggcgg 61
>dbj|AK077950.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length enriched library, clone:6030458J16 product:unclassifiable, full insert sequence Length = 2179 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 cccggcggcggcagcggcgg 315 |||||||||||||||||||| Sbjct: 68 cccggcggcggcagcggcgg 49
>dbj|AK042293.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630079E18 product:hypothetical D111/G-patch domain/Aminoacyl-transfer RNA synthetases class-I/Glutamic acid-rich region/SWAP / SURP containing protein, full insert sequence Length = 3684 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 cggcggcggcagcggcgggg 317 |||||||||||||||||||| Sbjct: 383 cggcggcggcagcggcgggg 402
>gb|AY027651.1| Pseudomonas sp. Cam-1 bph operon, complete cds Length = 6137 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 ccccgagcaggtggatgcgc 374 |||||||||||||||||||| Sbjct: 3021 ccccgagcaggtggatgcgc 3002
>dbj|AK090169.1| Mus musculus 13 days embryo spinal cord cDNA, RIKEN full-length enriched library, clone:G630010A09 product:Rab3 interacting protein 1, full insert sequence Length = 1558 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 cccggcggcggcagcggcgg 315 |||||||||||||||||||| Sbjct: 165 cccggcggcggcagcggcgg 146
>tpg|BK001744.1| TPA: TPA_exp: Suid herpesvirus 1, complete genome Length = 143461 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 gggaccgggaccgggacagg 289 |||||||||||||||||||| Sbjct: 134490 gggaccgggaccgggacagg 134509 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 gggaccgggaccgggacagg 289 |||||||||||||||||||| Sbjct: 110112 gggaccgggaccgggacagg 110093
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 ccggcggcggcagcggcggg 316 |||||||||||||||||||| Sbjct: 669012 ccggcggcggcagcggcggg 668993
>dbj|AK078552.1| Mus musculus 12 days embryo female mullerian duct includes surrounding region cDNA, RIKEN full-length enriched library, clone:6820449B07 product:ATP-DEPENDENT HELICASE DDX8 (RNA HELICASE HRH1) (DEAH-BOX PROTEIN 8) homolog [Homo sapiens], full insert sequence Length = 3856 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 gggaccgggaccgggacagg 289 |||||||||||||||||||| Sbjct: 599 gggaccgggaccgggacagg 618
>gb|AF100907.1|AF100907 Homo sapiens bone morphogenetic protein 11 (BMP11) mRNA, complete cds Length = 1443 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 cggcggcggcagcggcgggg 317 |||||||||||||||||||| Sbjct: 145 cggcggcggcagcggcgggg 164
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 gaggcggcgcgcggagggca 120 |||||||||||||||||||| Sbjct: 106722 gaggcggcgcgcggagggca 106741
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 ccggcggcggcagcggcggg 316 |||||||||||||||||||| Sbjct: 21778387 ccggcggcggcagcggcggg 21778406 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 296 cccggcggcggcagcggcggggcg 319 |||||||||||| ||||||||||| Sbjct: 18798102 cccggcggcggcggcggcggggcg 18798125 Score = 40.1 bits (20), Expect = 5.9 Identities = 44/52 (84%) Strand = Plus / Plus Query: 359 gagcaggtggatgcgctggagcgcgtctacagcgagtgccccaagcccagct 410 ||||||||||| ||||| ||||| || |||| |||||||| ||||| |||| Sbjct: 3331313 gagcaggtggaggcgctagagcgggtgtacactgagtgccctaagcctagct 3331364
>gb|AC099324.5| Oryza sativa chromosome 3 BAC OSJNBb0043P23 genomic sequence, complete sequence Length = 116443 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 ccggcggcggcagcggcggg 316 |||||||||||||||||||| Sbjct: 112271 ccggcggcggcagcggcggg 112252
>gb|AC012671.7| Homo sapiens BAC clone RP11-554H10 from 2, complete sequence Length = 198694 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 133 gaccctggccctggctcatcctct 156 ||||||||| |||||||||||||| Sbjct: 4161 gaccctggctctggctcatcctct 4184
>gb|AC104081.2| Homo sapiens BAC clone RP11-559A1 from 2, complete sequence Length = 142118 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 133 gaccctggccctggctcatcctct 156 ||||||||| |||||||||||||| Sbjct: 66896 gaccctggctctggctcatcctct 66919
>gb|AC155722.9| Mus musculus 6 BAC RP24-204J8 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 198481 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 cccggcggcggcagcggcgg 315 |||||||||||||||||||| Sbjct: 181429 cccggcggcggcagcggcgg 181410
>gb|M86348.1|PSEBPHA Pseudomonas sp. LB400 biphenyl dioxygenase (bphA), biphenyl dioxygenase (bphE), biphenyl dioxygenase (bphF) and biphenyl dioxygenase (bphG)s, complete cds, and dihydrodiol dehydrogenase (bphB), partial cds Length = 5700 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 ccccgagcaggtggatgcgc 374 |||||||||||||||||||| Sbjct: 4462 ccccgagcaggtggatgcgc 4443
>gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic sequence, complete sequence Length = 163828 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 cggcggcggcagcggcgggg 317 |||||||||||||||||||| Sbjct: 12701 cggcggcggcagcggcgggg 12682
>gb|AC073487.34| Homo sapiens 12 BAC RP11-762I7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 54666 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 cggcggcggcagcggcgggg 317 |||||||||||||||||||| Sbjct: 8234 cggcggcggcagcggcgggg 8253
>gb|AC133007.4| Oryza sativa chromosome 3 BAC OSJNBa0094J08 genomic sequence, complete sequence Length = 172337 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 cggcggcggcagcggcgggg 317 |||||||||||||||||||| Sbjct: 8802 cggcggcggcagcggcgggg 8821
>dbj|AP003076.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0481E12 Length = 161563 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 239 cacggcgggcacggcgggcacggcgggg 266 ||||| |||||||| ||||||||||||| Sbjct: 137847 cacggggggcacggtgggcacggcgggg 137820
>ref|NM_204536.1| Gallus gallus retinoic acid receptor alpha 1 isoform (RAR-ALPHA1), mRNA Length = 1552 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 gcgctacacccccgagcagg 365 |||||||||||||||||||| Sbjct: 882 gcgctacacccccgagcagg 901
>gb|AF518875.1| Mus musculus arginine/serine-rich 14 splicing factor (Sfrs14) mRNA, complete cds Length = 3891 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 cggcggcggcagcggcgggg 317 |||||||||||||||||||| Sbjct: 375 cggcggcggcagcggcgggg 394
>ref|XM_345266.2| PREDICTED: Rattus norvegicus tripartite motif protein 33 (predicted) (Trim33_predicted), mRNA Length = 3435 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 gggaccgggaccgggacagg 289 |||||||||||||||||||| Sbjct: 320 gggaccgggaccgggacagg 301
>dbj|AP002817.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0699D11 Length = 140825 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 cccggcggcggcagcggcgg 315 |||||||||||||||||||| Sbjct: 61355 cccggcggcggcagcggcgg 61336
>gb|AC104839.5| Homo sapiens BAC clone RP13-868N24 from 2, complete sequence Length = 38569 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctttcccttcccttccatcc 20 |||||||||||||||||||| Sbjct: 8690 ctttcccttcccttccatcc 8709
>dbj|AP004643.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1113_A10 Length = 160089 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 cggcggcggcagcggcgggg 317 |||||||||||||||||||| Sbjct: 48646 cggcggcggcagcggcgggg 48665
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 289 gtcgtcgcccggcggcggcagcgg 312 ||||||| |||||||||||||||| Sbjct: 1358783 gtcgtcgaccggcggcggcagcgg 1358806
>dbj|AP006164.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1386G10 Length = 121827 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 cccggcggcggcagcggcgg 315 |||||||||||||||||||| Sbjct: 29469 cccggcggcggcagcggcgg 29488
>dbj|AP005558.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1155_H10 Length = 140475 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 297 ccggcggcggcagcggcggggcgc 320 ||||||||||| |||||||||||| Sbjct: 100359 ccggcggcggcggcggcggggcgc 100336
>gb|AC102106.14| Mus musculus chromosome 18, clone RP23-92B24, complete sequence Length = 230823 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 cggcggcggcagcggcgggg 317 |||||||||||||||||||| Sbjct: 136573 cggcggcggcagcggcgggg 136554
>dbj|AP006056.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1172G12 Length = 171974 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 ccggcggcggcagcggcggg 316 |||||||||||||||||||| Sbjct: 71634 ccggcggcggcagcggcggg 71615 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,914,859 Number of Sequences: 3902068 Number of extensions: 2914859 Number of successful extensions: 148621 Number of sequences better than 10.0: 298 Number of HSP's better than 10.0 without gapping: 321 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 141764 Number of HSP's gapped (non-prelim): 6842 length of query: 442 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 420 effective length of database: 17,147,199,772 effective search space: 7201823904240 effective search space used: 7201823904240 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
