Clone Name	bastl02g06
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|DQ201141.1| Hordeum vulgare subsp. vulgare cultivar Kompolti ...	874	0.0
2	gb|DQ201140.1| Hordeum vulgare subsp. vulgare cultivar Morex phy...	866	0.0
3	gb|DQ201139.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo p...	866	0.0
4	emb|AJ313100.1|TAE313100 Triticum aestivum partial phya2 gene fo...	747	0.0
5	emb|AJ313099.1|TAE313099 Triticum aestivum phya1 gene for phytoc...	729	0.0
6	emb|X03243.1|ASAP4R Avena sativa mRNA for phytochrome (AP4)	605	e-170
7	emb|X03244.1|ASAP5R Avena sativa mRNA fragment for phytochrome (...	587	e-164
8	gb|U08166.1|HVU08166 Hordeum vulgare phytochrome (PHYA) gene, pa...	585	e-164
9	gb|M18822.1|ASTPHT3A Avena sativa type 3 phytochrome gene (phy3)...	565	e-158
10	emb|X03242.1|ASAP3R Avena sativa mRNA for phytochrome (AP3)	549	e-153
11	gb|AY466083.1| Sorghum propinquum phytochrome A (PHYA) gene, com...	430	e-117
12	gb|AY466082.1| Sorghum x drummondii voucher PI302233 phytochrome...	430	e-117
13	gb|AY466081.1| Sorghum arundinaceum voucher PI302233 phytochrome...	430	e-117
14	gb|AY466080.1| Sorghum arundinaceum voucher PI225905 phytochrome...	430	e-117
15	gb|AY466079.1| Sorghum arundinaceum voucher IS14485 phytochrome ...	430	e-117
16	gb|AY466078.1| Sorghum arundinaceum voucher PI302105 phytochrome...	430	e-117
17	gb|AY466077.1| Sorghum arundinaceum voucher IS14567 phytochrome ...	430	e-117
18	gb|AY466076.1| Sorghum arundinaceum voucher IS14503 phytochrome ...	430	e-117
19	gb|AY466075.1| Sorghum arundinaceum voucher PI213900 phytochrome...	430	e-117
20	gb|AY466074.1| Sorghum arundinaceum voucher IS14569 phytochrome ...	430	e-117
21	gb|AY466073.1| Sorghum bicolor phytochrome A (PHYA) gene, comple...	430	e-117
22	gb|AY466072.1| Sorghum bicolor isolate PHYA-RTx430 phytochrome A...	430	e-117
23	gb|AY466071.1| Sorghum bicolor voucher NSL83707 phytochrome A (P...	430	e-117
24	gb|AY466070.1| Sorghum bicolor voucher PI152593 phytochrome A (P...	430	e-117
25	gb|AY466069.1| Sorghum bicolor voucher PI229835 phytochrome A (P...	430	e-117
26	gb|AY466068.1| Sorghum bicolor voucher PI153800 phytochrome A (P...	430	e-117
27	gb|AY466067.1| Sorghum bicolor voucher PI267380 phytochrome A (P...	430	e-117
28	gb|AF369906.1| Sorghum bicolor clone BAC10J22 Sbb3766 sequence	430	e-117
29	gb|U56729.1|SBU56729 Sorghum bicolor phytochrome A (PHYA) mRNA, ...	430	e-117
30	gb|AF377946.3| Oryza sativa (japonica cultivar-group) chromosome...	426	e-116
31	gb|AC147426.2| Oryza sativa chromosome 3 B1377B10 genomic seque...	426	e-116
32	gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3	426	e-116
33	dbj|AB109891.1| Oryza sativa (japonica cultivar-group) PHYA mRNA...	426	e-116
34	dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...	426	e-116
35	emb|X14172.1|OSPHY18 Rice phy 18 gene for phytochrome	426	e-116
36	dbj|AK072482.1| Oryza sativa (japonica cultivar-group) cDNA clon...	426	e-116
37	dbj|AK065707.1| Oryza sativa (japonica cultivar-group) cDNA clon...	426	e-116
38	gb|AY260865.1| Zea mays phytochrome A2 (phyA2) gene, complete cds	414	e-112
39	gb|AY234826.1| Zea mays cultivar B73 phytochrome A1 apoprotein (...	414	e-112
40	gb|U61216.1|SVU61216 Stipa viridula phytochrome (PHYA) gene, par...	361	1e-96
41	gb|U61213.1|PPU61213 Poa pratensis phytochrome (PHYA) gene, part...	337	2e-89
42	gb|U61196.1|DUU61196 Danthonia unispicata phytochrome (PHYA) gen...	258	1e-65
43	gb|U61211.1|PAU61211 Phragmites australis phytochrome (PHYA) gen...	256	5e-65
44	gb|U61209.1|PSU61209 Pennisetum setaceum phytochrome (PHYA) gene...	242	8e-61
45	gb|U61185.1|ALU61185 Aristida longiseta phytochrome (PHYA) gene,...	234	2e-58
46	gb|U61190.1|BGU61190 Bouteloua gracilis phytochrome (PHYA) gene,...	224	2e-55
47	gb|U61199.1|ECU61199 Eragrostis cilianense phytochrome (PHYA) ge...	210	3e-51
48	gb|AF190072.1|AF190072 Calycanthus floridus phytochrome A (PHYA)...	200	3e-48
49	gb|U61208.1|PCU61208 Panicum capillare phytochrome (PHYA) gene, ...	186	4e-44
50	gb|U61195.1|CLU61195 Calamovilfa longifolia phytochrome (PHYA) g...	178	1e-41
51	gb|AF276743.1|AF276743 Smilax rotundifolia phytochrome A (PHYA) ...	172	6e-40
52	gb|AF190078.1|AF190078 Degeneria vitiensis phytochrome A (PHYA) ...	165	2e-37
53	gb|AF190089.1|AF190089 Idiospermum australiense phytochrome A (P...	157	4e-35
54	gb|AF190082.1|AF190082 Eupomatia laurina phytochrome A (PHYA) ge...	139	9e-30
55	gb|U61202.1|FIU61202 Flagellaria indica phytochrome (PHYA) gene,...	127	3e-26
56	gb|AF190094.1|AF190094 Magnolia X soulangeana phytochrome A (PHY...	123	5e-25
57	gb|AF276714.1|AF276714 Asparagus falcatus phytochrome A (PHYA) g...	121	2e-24
58	gb|AF276747.1|AF276747 Tacca chantieri phytochrome A (PHYA) gene...	117	3e-23
59	gb|U61187.1|BSU61187 Bambusa sp. Kellogg V6 phytochrome (PHYA) g...	111	2e-21
60	gb|AF276734.1|AF276734 Pachysandra americana phytochrome A (PHYA...	111	2e-21
61	ref|NM_100828.2| Arabidopsis thaliana PHYA (PHYTOCHROME A); G-pr...	109	8e-21
62	gb|AC003970.1| Arabidopsis thaliana chromosome I BAC F14J9 genom...	109	8e-21
63	gb|AY039520.1| Arabidopsis thaliana At1g09570/F14J9_27 mRNA, com...	109	8e-21
64	gb|AF276722.1|AF276722 Hedyosmum sp. SM-2000 phytochrome A (PHYA...	109	8e-21
65	emb|X17341.1|ATPHYA Arabidopsis thaliana phyA mRNA for phytochrome	109	8e-21
66	gb|L21154.1|ATHPHYTOA Arabidopsis thaliana phytochrome A (phyA) ...	109	8e-21
67	gb|AF190064.1|AF190064 Annona sp. SM-1999 phytochrome A (PHYA) g...	107	3e-20
68	emb|AM233982.1| Melampyrum sylvaticum partial phya gene for phyt...	107	3e-20
69	emb|AM233980.1| Melampyrum nemorosum partial phya gene for phyto...	107	3e-20
70	ref|XM_469781.1| Oryza sativa (japonica cultivar-group), mRNA	105	1e-19
71	gb|AF377947.3| Oryza sativa (japonica cultivar-group) chromosome...	105	1e-19
72	gb|AC092556.8| Oryza sativa chromosome 3 BAC OSJNBa0047E24 genom...	105	1e-19
73	gb|AC135225.4| Oryza sativa chromosome 3 BAC OJ1112_G08 genomic ...	105	1e-19
74	dbj|AB018442.1| Oryza sativa (japonica cultivar-group) mRNA for ...	105	1e-19
75	gb|AF141942.1|AF141942 Oryza sativa phytochrome C (phyC) gene, c...	105	1e-19
76	gb|DQ201146.1| Hordeum vulgare subsp. vulgare cultivar Kompolti ...	103	5e-19
77	gb|DQ238106.1| Hordeum vulgare subsp. vulgare cv. Morex phytochr...	103	5e-19
78	gb|DQ201145.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo p...	103	5e-19
79	gb|AF276741.1|AF276741 Sarcandra glabra phytochrome A (PHYA) gen...	103	5e-19
80	gb|U78835.1|SAU78835 Sophora affinis phytochrome A (PHYA) gene, ...	103	5e-19
81	emb|AM233923.1| Ajuga reptans partial phya gene for phytochrome ...	101	2e-18
82	emb|AM233963.1| Glechoma hederacea partial phya gene for phytoch...	101	2e-18
83	dbj|AB036764.1| Armoracia rusticana ArPHYA23 mRNA for phytochrom...	101	2e-18
84	dbj|AB036762.1| Armoracia rusticana phyA mRNA for phytochrome A,...	101	2e-18
85	gb|U78841.1|ABU78841 Austrosteensia blackii phytochrome A (PHYA)...	98	3e-17
86	gb|AY672998.1| Triticum aestivum cultivar Soleil putative non-LT...	96	1e-16
87	gb|AY672997.1| Triticum aestivum cultivar Saitama 27 Tourist MIT...	96	1e-16
88	gb|AY672996.1| Triticum aestivum cultivar Reward Tourist MITE, c...	96	1e-16
89	gb|AY672995.1| Triticum aestivum cultivar Chinese Spring Tourist...	96	1e-16
90	gb|AY672994.1| Triticum aestivum subsp. spelta cultivar Grey Tou...	96	1e-16
91	emb|AJ295224.1|TAE295224 Triticum aestivum phyC gene for phytoch...	96	1e-16
92	gb|AF004804.1|AF004804 Pongamiopsis amygdalina phytochrome A3 (P...	96	1e-16
93	gb|AF004803.1|AF004803 Pongamiopsis amygdalina phytochrome A2 (P...	96	1e-16
94	gb|AF004783.1|AF004783 Millettia dura phytochrome A (PHYA) gene,...	96	1e-16
95	emb|AM233973.1| Lathraea squamaria partial phya gene for phytoch...	94	5e-16
96	emb|AM233966.1| Hyobanche rubra partial phya gene for phytochrom...	94	5e-16
97	emb|AM233935.1| Buchnera floridana partial phya gene for phytoch...	94	5e-16
98	emb|AM234025.1| Striga bilabiata partial phya gene for phytochro...	94	5e-16
99	dbj|AB036763.1| Armoracia rusticana ArPHYA16 mRNA for phytochrom...	94	5e-16
100	gb|AY672999.1| Triticum aestivum cultivar Soleil phytochrome C (...	92	2e-15
101	gb|AF276727.1|AF276727 Hypecoum imberbe phytochrome A (PHYA) gen...	92	2e-15
102	gb|AF190102.1|AF190102 Sagittaria sp. Mathews 383 specimen-vouch...	92	2e-15
103	gb|AF190096.1|AF190096 Nelumbo nucifera phytochrome A (PHYA) gen...	92	2e-15
104	emb|AM233919.1| Melampyrum arvense partial phya gene for phytoch...	92	2e-15
105	emb|AM234031.1| Tozzia alpina partial phya gene for phytochrome ...	92	2e-15
106	emb|AM234026.1| Striga gesnerioides partial phya gene for phytoc...	92	2e-15
107	gb|U78616.1|CMU78616 Coursetia madrensis phytochrome A (PHYA) ge...	92	2e-15
108	emb|AM233999.1| Parentucellia latifolia partial phya gene for ph...	90	7e-15
109	gb|AF004776.1|AF004776 Dahlstedtia pinnata phytochrome A (PHYA) ...	90	7e-15
110	dbj|AP004520.1| Lotus japonicus genomic DNA, chromosome 5, clone...	90	7e-15
111	gb|AY348567.1| Cuscuta pentagona phytochrome A (phyA) mRNA, comp...	88	3e-14
112	gb|U83266.1|PPU83266 Pongamia pinnata phytochrome A (PHYA) gene,...	88	3e-14
113	gb|AF190108.1|AF190108 Trochodendron aralioides phytochrome A (P...	86	1e-13
114	gb|AF190076.1|AF190076 Chloranthus spicatus phytochrome A (PHYA)...	86	1e-13
115	emb|AM234029.1| Striga orobanchoides partial phya gene for phyto...	86	1e-13
116	emb|AM234027.1| Striga linearifolia partial phya gene for phytoc...	86	1e-13
117	gb|AF004802.1|AF004802 Pongamiopsis amygdalina phytochrome A (PH...	86	1e-13
118	gb|AY673002.1|AY673001S2 Triticum aestivum cultivar Chinese Spri...	84	4e-13
119	gb|AY673000.1| Triticum aestivum cultivar Soleil phytochrome C (...	84	4e-13
120	gb|U08177.1|PCU08177 Panicum capillare phytochrome (PHYA), parti...	84	4e-13
121	gb|AF276742.1|AF276742 Sarcandra glabra phytochrome C (PHYC) gen...	84	4e-13
122	gb|AF190068.1|AF190068 Austrobaileya scandens phytochrome A (PHY...	84	4e-13
123	emb|AJ286635.1|DFR286635 Dacrydium franklinii partial phyO gene ...	84	4e-13
124	emb|AM233938.1| Castilleja coccinea partial phya gene for phytoc...	84	4e-13
125	gb|AF004787.1|AF004787 Millettia richardiana phytochrome A (PHYA...	84	4e-13
126	gb|U78847.1|PFU78847 Poecilanthe falcata phytochrome A (PHYA) ge...	84	4e-13
127	gb|AF276745.1|AF276745 Spathiphyllum clevelandii phytochrome A (...	82	2e-12
128	gb|AF190086.1|AF190086 Hernandia lychnifera phytochrome A (PHYA)...	82	2e-12
129	emb|AM233961.1| Euphrasia stricta partial phya gene for phytochr...	82	2e-12
130	emb|AM233927.1| Bartsia crenata partial phya gene for phytochrom...	82	2e-12
131	emb|AM233993.1| Orobanche gracilis partial phya gene for phytoch...	82	2e-12
132	gb|U78854.1|CAU78854 Callerya atropurpurea phytochrome A-like pr...	82	2e-12
133	gb|U08183.1|UDU08183 Urtica dioica phytochrome (PHYA), partial cds	80	7e-12
134	gb|AF276746.1|AF276746 Spathiphyllum clevelandii phytochrome C (...	80	7e-12
135	emb|AM233921.1| Agalinis fasciculata partial phya gene for phyto...	80	7e-12
136	gb|U78844.1|PRU78844 Platycyamus regnellii phytochrome A (PHYA) ...	80	7e-12
137	gb|U78830.1|MSU78830 Myrospermum sousanum phytochrome A (PHYA) g...	80	7e-12
138	gb|AY348568.1| Orobanche minor phytochrome A (phyA) mRNA, comple...	80	7e-12
139	gb|AY345120.1| Cyrtosia septentrionalis phytochrome A (phyA) mRN...	78	3e-11
140	gb|AF276750.1|AF276750 Xanthorhiza simplicissima phytochrome A (...	78	3e-11
141	gb|AF276748.1|AF276748 Tetracentron sinense phytochrome A (PHYA)...	78	3e-11
142	emb|AM233977.1| Lindenbergia muraria partial phya gene for phyto...	78	3e-11
143	emb|AM233970.1| Lathraea clandestina partial phya gene for phyto...	78	3e-11
144	emb|AM233967.1| Hyobanche sanguinea partial phya gene for phytoc...	78	3e-11
145	emb|AM234016.1| Rhynchocorys orientalis partial phya gene for ph...	78	3e-11
146	gb|AF004793.1|AF004793 Millettia grandis phytochrome A1 (PHYA1) ...	78	3e-11
147	gb|AY234830.1| Zea mays cultivar B73 phytochrome C2 apoprotein (...	76	1e-10
148	gb|AF004781.1| Xeroderris stuhlmannii phytochrome A1 (PHYA1) gen...	76	1e-10
149	dbj|AB206946.1| Aristolochia praevenosa PHYA gene for phytochrom...	76	1e-10
150	dbj|AB206940.1| Aristolochia serpentaria PHYA gene for phytochro...	76	1e-10
151	dbj|AB206939.1| Aristolochia serpentaria PHYA gene for phytochro...	76	1e-10
152	dbj|AB206937.1| Aristolochia tomentosa PHYA gene for phytochrome...	76	1e-10
153	dbj|AB206933.1| Aristolochia kaempferi PHYA gene for phytochrome...	76	1e-10
154	dbj|AB206927.1| Aristolochia convolvulacea PHYA gene for phytoch...	76	1e-10
155	dbj|AB206926.1| Aristolochia convolvulacea PHYA gene for phytoch...	76	1e-10
156	dbj|AB206923.1| Aristolochia arborea PHYA gene for phytochrome A...	76	1e-10
157	dbj|AB206922.1| Aristolochia arborea PHYA gene for phytochrome A...	76	1e-10
158	gb|AF190092.1|AF190092 Lactoris fernandeziana phytochrome C (PHY...	76	1e-10
159	emb|AM233922.1| Agalinis purpurea partial phya gene for phytochr...	76	1e-10
160	emb|AM233974.1| Lathraea squamaria partial phya gene for phytoch...	76	1e-10
161	emb|AM233956.1| Escobedia grandiflora partial phya gene for phyt...	76	1e-10
162	emb|AM234006.1| Pedicularis kansuensis partial phya gene for phy...	76	1e-10
163	emb|AM234000.1| Parentucellia viscosa partial phya gene for phyt...	76	1e-10
164	gb|AF004801.1|AF004801 Pongamiopsis amygdalina phytochrome A1 (P...	76	1e-10
165	gb|AF004800.1|AF004800 Lonchocarpus phaseolifolius phytochrome A...	76	1e-10
166	gb|AF004790.1|AF004790 Piscidia piscipula phytochrome A (PHYA) g...	76	1e-10
167	gb|AF500522.1| Androstachys johnsonii phytochrome C (PHYC) gene,...	74	4e-10
168	gb|AF190091.1|AF190091 Lactoris fernandeziana phytochrome A (PHY...	74	4e-10
169	gb|AF190077.1|AF190077 Chloranthus spicatus phytochrome C (PHYC)...	74	4e-10
170	emb|X98621.1|OVPHYTOGE O.vulgatum phytochrome gene	74	4e-10
171	emb|X98620.1|AEPHYTOGE A.evecta phytochrome gene	74	4e-10
172	emb|AM237453.1| Alonsoa sp. Wood 18362 partial phyA gene for phy...	74	4e-10
173	emb|AM233981.1| Melampyrum pratense partial phya gene for phytoc...	74	4e-10
174	emb|AM233979.1| Melampyrum carstiense partial phya gene for phyt...	74	4e-10
175	emb|AM233958.1| Euphrasia alsa partial phya gene for phytochrome...	74	4e-10
176	emb|AM233930.1| Bartsia trixago partial phya gene for phytochrom...	74	4e-10
177	emb|AM233924.1| Alectra sessiliflora partial phya gene for phyto...	74	4e-10
178	emb|AM234030.1| Strobilanthes attenuata partial phya gene for ph...	74	4e-10
179	emb|AM234010.1| Phtheirospermum japonicum partial phya gene for ...	74	4e-10
180	emb|AM233995.1| Orobanche raddeana partial phya gene for phytoch...	74	4e-10
181	gb|AF216113.1| Dicarpellum pancheri clone 2 phytochrome B (PHYB)...	72	2e-09
182	gb|AF216112.1| Dicarpellum pancheri clone 1 phytochrome B (PHYB)...	72	2e-09
183	emb|AM233983.1| Melasma scabrum partial phya gene for phytochrom...	72	2e-09
184	emb|AM233971.1| Lathraea clandestina partial phya gene for phyto...	72	2e-09
185	emb|AM233965.1| Hyobanche glabrata partial phya gene for phytoch...	72	2e-09
186	emb|AM233951.1| Cordylanthus ramosus partial phya gene for phyto...	72	2e-09
187	emb|AM234004.1| Pedicularis gyrorhyncha partial phya gene for ph...	72	2e-09
188	gb|U83270.1|DEU83270 Derris elliptica phytochrome A (PHYA) gene,...	72	2e-09
189	gb|AY396715.1| Tofieldia calyculata phytochrome C (PHYC) gene, p...	70	7e-09
190	gb|AY425089.1| Austrobuxus megacarpus PHYC (PHYC) gene, partial cds	70	7e-09
191	gb|AF216174.1| Tontelea attenuata clone 1 phytochrome B (PHYB) g...	70	7e-09
192	gb|U08173.1|LEU08173 Lycopersicon esculentum phytochrome (PHYA),...	70	7e-09
193	gb|S84872.1| Solanum tuberosum type A phytochrome (c-phyA) mRNA,...	70	7e-09
194	gb|AF276751.1|AF276751 Xanthorhiza simplicissima phytochrome C (...	70	7e-09
195	gb|AF276710.1|AF276710 Akebia quinata phytochrome A (PHYA) gene,...	70	7e-09
196	gb|AF190062.1|AF190062 Amborella trichopoda phytochrome A (PHYA)...	70	7e-09
197	gb|AF190061.1|AF190061 Acorus gramineus phytochrome C (PHYC) gen...	70	7e-09
198	emb|X66784.1|NTPHYA1 N.tabacum Nt-PHYA-1 gene for type-A Phytoch...	70	7e-09
199	emb|AJ001916.1|LEAJ1916 Lycopersicon esculentum mRNA for phytoch...	70	7e-09
200	emb|AJ001915.1|LEAJ1915 Lycopersicon esculentum mRNA for phytoch...	70	7e-09
201	emb|AJ001914.1|LEAJ1914 Lycopersicon esculentum mRNA for phytoch...	70	7e-09
202	emb|AJ001913.1|LEAJ1913 Lycopersicon esculentum phyA gene (exons...	70	7e-09
203	emb|AJ286679.1|MLA286679 Marattia laevis partial phy1 gene for p...	70	7e-09
204	emb|AM234018.1| Scrophularia arguta partial phya gene for phytoc...	70	7e-09
205	emb|AM234015.1| Rhinanthus minor partial phya gene for phytochro...	70	7e-09
206	gb|U83269.1|CBU83269 Craibia brevicaudata phytochrome A (PHYA) g...	70	7e-09
207	gb|AF004794.1|AF004794 Millettia grandis phytochrome A (PHYA) ge...	70	7e-09
208	gb|AY234829.1| Zea mays cultivar B73 phytochrome C1 apoprotein (...	68	3e-08
209	gb|AY425119.1| Micrantheum hexandrum PHYC (PHYC) gene, partial cds	68	3e-08
210	gb|AF216135.1| Maytenus undata clone 2 phytochrome B (PHYB) gene...	68	3e-08
211	gb|U08154.1|CDU08154 Ceratophyllum demersum phytochrome (PHYA) g...	68	3e-08
212	gb|U08170.1|HVU08170 Hordeum vulgare phytochrome (PHYC), partial...	68	3e-08
213	dbj|AB206945.1| Aristolochia reniformis PHYA gene for phytochrom...	68	3e-08
214	dbj|AB206944.1| Aristolochia reniformis PHYA gene for phytochrom...	68	3e-08
215	dbj|AB206938.1| Aristolochia tomentosa PHYA gene for phytochrome...	68	3e-08
216	dbj|AB206932.1| Aristolochia kaempferi PHYA gene for phytochrome...	68	3e-08
217	gb|AF276712.1|AF276712 Aristolochia grandiflora phytochrome A (P...	68	3e-08
218	emb|X75412.1|PCPHYA P.crispum phyA mRNA for phytochrome A	68	3e-08
219	emb|AJ002525.1|DLAJ2525 Digitalis lanata mRNA for phytochrome A,...	68	3e-08
220	emb|AM233984.1| Melasma scabrum partial phya gene for phytochrom...	68	3e-08
221	emb|AM234028.1| Striga linearifolia partial phya gene for phytoc...	68	3e-08
222	emb|AM234014.1| Rhinanthus glacialis partial phya gene for phyto...	68	3e-08
223	emb|AM234013.1| Rhinanthus freynii partial phya gene for phytoch...	68	3e-08
224	emb|AM234012.1| Rhinanthus alectorolophus partial phya gene for ...	68	3e-08
225	emb|AM233997.1| Orthocarpus bracteosus partial phya gene for phy...	68	3e-08
226	gb|U83271.1|DEU83271 Derris elliptica phytochrome A-like (PHYA-l...	68	3e-08
227	gb|U61210.1|PSU61210 Pennisetum setaceum phytochrome (PHYC) gene...	68	3e-08
228	gb|AY499071.1| Heteropterys steyermarkii phytochrome C (PHYC) ge...	66	1e-07
229	gb|AY466468.1| Sorghum x drummondii voucher PI199869 phytochrome...	66	1e-07
230	gb|AY466467.1| Sorghum arundinaceum voucher PI302233 phytochrome...	66	1e-07
231	gb|AY466466.1| Sorghum arundinaceum voucher PI225905 phytochrome...	66	1e-07
232	gb|AY466465.1| Sorghum arundinaceum voucher IS14485 phytochrome ...	66	1e-07
233	gb|AY466464.1| Sorghum arundinaceum voucher PI302105 phytochrome...	66	1e-07
234	gb|AY466463.1| Sorghum arundinaceum voucher IS14567 phytochrome ...	66	1e-07
235	gb|AY466462.1| Sorghum arundinaceum voucher IS14503 phytochrome ...	66	1e-07
236	gb|AY466461.1| Sorghum arundinaceum voucher PI213900 phytochrome...	66	1e-07
237	gb|AY466460.1| Sorghum arundinaceum voucher IS14569 phytochrome ...	66	1e-07
238	gb|AY466459.1| Sorghum bicolor phytochrome C (PHYC) gene, comple...	66	1e-07
239	gb|AY466458.1| Sorghum bicolor phytochrome C (PHYC) gene, comple...	66	1e-07
240	gb|AY466457.1| Sorghum bicolor voucher NSL83707 phytochrome C (P...	66	1e-07
241	gb|AY466456.1| Sorghum bicolor voucher PI152593 phytochrome C (P...	66	1e-07
242	gb|AY466455.1| Sorghum bicolor voucher PI229835 phytochrome C (P...	66	1e-07
243	gb|AY466454.1| Sorghum bicolor voucher PI153800 phytochrome C (P...	66	1e-07
244	gb|AY466453.1| Sorghum bicolor voucher PI267380 phytochrome C (P...	66	1e-07
245	gb|AF276739.1|AF276739 Pteridophyllum racemosum phytochrome A (P...	66	1e-07
246	gb|AF276738.1|AF276738 Pseudowintera axillaris phytochrome C (PH...	66	1e-07
247	gb|AF190087.1|AF190087 Hernandia lychnifera phytochrome C (PHYC)...	66	1e-07
248	emb|AJ286649.1|PSY286649 Pinus sylvestris partial phyP/Allel gen...	66	1e-07
249	gb|U78068.1|DNU78068 Dalbergiella nyasae phytochrome A (PHYA) ge...	66	1e-07
250	emb|AM233986.1| Nesogenes africanus partial phya gene for phytoc...	66	1e-07
251	emb|AM233962.1| Euphrasia stricta partial phya gene for phytochr...	66	1e-07
252	emb|AM233960.1| Euphrasia regelii partial phya gene for phytochr...	66	1e-07
253	emb|AM233959.1| Euphrasia collina partial phya gene for phytochr...	66	1e-07
254	emb|AM234023.1| Sopubia ramosa partial phya gene for phytochrome...	66	1e-07
255	emb|AM234002.1| Pedicularis densispica partial phya gene for phy...	66	1e-07
256	emb|AM233991.1| Orobanche densiflora partial phya gene for phyto...	66	1e-07
257	gb|AF004788.1|AF004788 Millettia richardiana phytochrome A1 (PHY...	66	1e-07
258	gb|U78836.1|SAU78836 Sophora affinis phytochrome A-type protein ...	66	1e-07
259	gb|U56731.1|SBU56731 Sorghum bicolor phytochrome C (PHYC) mRNA, ...	66	1e-07
260	gb|L34844.1|SOYPHYA Soybean phytochrome A (phyA) mRNA, complete cds	66	1e-07
261	gb|L34842.1|SOYCPPHYAA Soybean chloroplast phytochrome A (phyA) ...	66	1e-07
262	dbj|AB016168.1| Adiantum capillus-veneris PHY1 mRNA for phytochr...	66	1e-07
263	dbj|AB016151.1| Adiantum capillus-veneris PHY1 gene for phytochr...	66	1e-07
264	gb|AY396711.1| Liriodendron tulipifera phytochrome C (PHYC) gene...	64	4e-07
265	gb|AY396709.1| Joinvillea ascendens phytochrome C (PHYC) gene, p...	64	4e-07
266	gb|AF276737.1|AF276737 Pseudowintera axillaris phytochrome A (PH...	64	4e-07
267	gb|AF276730.1|AF276730 Lardizabala biternata phytochrome A (PHYA...	64	4e-07
268	gb|AF276724.1|AF276724 Heuchera canadensis phytochrome A (PHYA) ...	64	4e-07
269	gb|AF190080.1|AF190080 Drimys winteri phytochrome A (PHYA) gene,...	64	4e-07
270	emb|AM233968.1| Lamium purpureum partial phya gene for phytochro...	64	4e-07
271	emb|AM233943.1| Castilleja sp. JB-2006 partial phya gene for phy...	64	4e-07
272	emb|AM233940.1| Castilleja lasiorhyncha partial phya gene for ph...	64	4e-07
273	emb|AM233928.1| Bartsia alpina partial phya gene for phytochrome...	64	4e-07
274	emb|AM234021.1| Sopubia cana partial phya gene for phytochrome A...	64	4e-07
275	gb|U78065.1|MSU78065 Mundulea sericea phytochrome A-like protein...	64	4e-07
276	gb|U78829.1|CNU78829 Cyclolobium nutans phytochrome A-type prote...	64	4e-07
277	gb|U78820.1|BSU78820 Brownea sp. 'Lavin 6225' phytochrome A (PHY...	64	4e-07
278	gb|DQ208423.1| Solanum tuberosum phytochrome A (phya) mRNA, comp...	62	2e-06
279	gb|AY425100.1| Dissiliaria muelleri PHYC (PHYC) gene, partial cds	62	2e-06
280	gb|AF216175.1| Tontelea attenuata clone 2 phytochrome B (PHYB) g...	62	2e-06
281	gb|U08172.1|MSU08172 Muscari sp. phytochrome (PHYA), partial cds	62	2e-06
282	gb|U61189.1|BSU61189 Bambusa sp. Kellogg V6 phytochrome (PHYC) g...	62	2e-06
283	gb|AF190104.1|AF190104 Saruma henryi phytochrome A (PHYA) gene, ...	62	2e-06
284	emb|X90942.1|PAPHYTSEQ P.abies phytochrome sequence (partial)	62	2e-06
285	emb|AM233945.1| Castilleja sulphurea partial phya gene for phyto...	62	2e-06
286	gb|U61220.1|ZMU61220 Zea mays phytochrome (PHYC) gene, partial cds	62	2e-06
287	gb|U61218.1|SVU61218 Stipa viridula phytochrome (PHYC) gene, par...	62	2e-06
288	gb|U61194.1|BIU61194 Bromus inermis phytochrome (PHYC) gene, par...	62	2e-06
289	gb|AY396714.1| Sabia swinhoei phytochrome C (PHYC) gene, partial...	60	6e-06
290	gb|AY674463.1| Sabia swinhoei phytochrome gene, partial cds	60	6e-06
291	gb|AY425087.1| Acalypha californica PHYC (PHYC) gene, partial cds	60	6e-06
292	gb|AY466452.1| Sorghum propinquum phytochrome C (PHYC) gene, com...	60	6e-06
293	gb|AF216134.1| Maytenus undata clone 1 phytochrome B (PHYB) gene...	60	6e-06
294	gb|AF216100.1| Canotia holacantha clone 2 phytochrome B (PHYB) g...	60	6e-06
295	gb|U61212.1|PAU61212 Phragmites australis phytochrome (PHYC) gen...	60	6e-06
296	gb|AF276729.1|AF276729 Illicium oligandrum phytochrome C (PHYC) ...	60	6e-06
297	gb|AF190060.1|AF190060 Acorus gramineus phytochrome A (PHYA) gen...	60	6e-06
298	emb|Y13792.1|IVPHYTOCH Isoetes velata phytochrome gene (partial)	60	6e-06
299	emb|AJ286644.1|MCO286644 Macrozamia communis partial phyO gene f...	60	6e-06
300	emb|AM233925.1| Aptosimum pumilum partial phya gene for phytochr...	60	6e-06
301	emb|AM234024.1| Striga asiatica partial phya gene for phytochrom...	60	6e-06
302	gb|U78839.1|CSU78839 Carmichaelia sp. 'Lavin 6201' phytochrome E...	60	6e-06
303	gb|U78838.1|CSU78838 Carmichaelia sp. 'Lavin 6201' phytochrome A...	60	6e-06
304	gb|U61219.1|TAU61219 Thamnochortus argenteus phytochrome (PHYC) ...	60	6e-06
305	gb|U61186.1|ALU61186 Aristida longiseta phytochrome (PHYC) gene,...	60	6e-06
306	gb|AY499059.1| Heteropterys byrsonimifolia phytochrome C (PHYC) ...	58	3e-05
307	gb|AY425095.1| Clusia gundlachii PHYC (PHYC) gene, partial cds	58	3e-05
308	gb|AF276723.1|AF276723 Hedyosmum sp. SM-2000 phytochrome C (PHYC...	58	3e-05
309	gb|AF276717.1|AF276717 Ceratophyllum demersum phytochrome C (PHY...	58	3e-05
310	gb|AF276716.1|AF276716 Ceratophyllum demersum phytochrome A (PHY...	58	3e-05
311	gb|AF190074.1|AF190074 Canella winterana phytochrome A (PHYA) ge...	58	3e-05
312	emb|AJ286638.1|GBI286638 Ginkgo biloba partial phyO gene for phy...	58	3e-05
313	emb|X98700.1|SSPHYTOGE S.serpens phytochrome gene	58	3e-05
314	gb|U60264.1|PAU60264 Picea abies phytochrome mRNA, complete cds	58	3e-05
315	emb|AM233988.1| Odontites himalayicus partial phya gene for phyt...	58	3e-05
316	emb|AM233987.1| Nesogenes dupontii partial phya gene for phytoch...	58	3e-05
317	emb|AM233926.1| Aureolaria pedicularia partial phya gene for phy...	58	3e-05
318	gb|U78828.1|CNU78828 Cyclolobium nutans phytochrome A (PHYA) gen...	58	3e-05
319	gb|U61204.1|FIU61204 Flagellaria indica phytochrome (PHYC) gene,...	58	3e-05
320	gb|U38365.1|PAU38365 Picea abies phytochrome (phy3) gene, partia...	58	3e-05
321	gb|AY396710.1| Knema latericia phytochrome C (PHYC) gene, partia...	56	1e-04
322	gb|AY674462.1| Reinwardtia indica phytochrome gene, partial cds	56	1e-04
323	gb|AY425127.1| Phyllanthus epiphyllanthus PHYC (PHYC) gene, part...	56	1e-04
324	gb|AY348569.1| Monotropastrum globosum phytochrome A (phyA) mRNA...	56	1e-04
325	gb|AF216161.1| Salacia impressifolia clone 1 phytochrome B (PHYB...	56	1e-04
326	gb|AF216111.1| Dicarpellum baillonianum clone 2 phytochrome B (P...	56	1e-04
327	gb|AF216110.1| Dicarpellum baillonianum clone 1 phytochrome B (P...	56	1e-04
328	gb|AF190093.1|AF190093 Lemna gibba phytochrome C (PHYC) gene, pa...	56	1e-04
329	gb|AF190085.1|AF190085 Hedycarya angustifolia phytochrome C (PHY...	56	1e-04
330	gb|AF190083.1|AF190083 Eupomatia laurina phytochrome C (PHYC) ge...	56	1e-04
331	gb|AF190081.1|AF190081 Drimys winteri phytochrome C (PHYC) gene,...	56	1e-04
332	gb|AF190079.1|AF190079 Degeneria vitiensis phytochrome C (PHYC) ...	56	1e-04
333	gb|AF190075.1|AF190075 Canella winterana phytochrome C (PHYC) ge...	56	1e-04
334	gb|AF190070.1|AF190070 Brasenia schreberi phytochrome A (PHYA) g...	56	1e-04
335	emb|AJ001318.1|PTXPTPHYA Populus tremula x Populus tremuloides m...	56	1e-04
336	emb|AJ286680.1|MLA286680 Marattia laevis partial phy2 gene for p...	56	1e-04
337	emb|AJ286636.1|GGN286636 Gnetum gnemon partial phyN gene for phy...	56	1e-04
338	gb|AF024544.1|AF024544 Populus balsamifera subsp. trichocarpa ph...	56	1e-04
339	emb|AM233964.1| Hyobanche atropurpurea partial phya gene for phy...	56	1e-04
340	emb|AM233955.1| Escobedia grandiflora partial phya gene for phyt...	56	1e-04
341	emb|AM233946.1| Castilleja sulphurea partial phya gene for phyto...	56	1e-04
342	emb|AM233939.1| Castilleja exserta partial phya gene for phytoch...	56	1e-04
343	emb|AM234017.1| Schwalbea americana partial phya gene for phytoc...	56	1e-04
344	emb|AM234008.1| Pedicularis tuberosa partial phya gene for phyto...	56	1e-04
345	emb|AM234007.1| Pedicularis kerneri partial phya gene for phytoc...	56	1e-04
346	emb|AM234005.1| Pedicularis julica partial phya gene for phytoch...	56	1e-04
347	emb|AM234003.1| Pedicularis foliosa partial phya gene for phytoc...	56	1e-04
348	gb|U78064.1|MSU78064 Mundulea sericea phytochrome A (PHYA) gene,...	56	1e-04
349	gb|M15265.1|CUCPHT Cucurbita pepo (zucchini) phytochrome mRNA, c...	56	1e-04
350	gb|AY396707.1| Carludovica palmata phytochrome C (PHYC) gene, pa...	54	4e-04
351	gb|M37217.1|PEAPHTAP Pisum sativum phytochrome (phy) gene, compl...	54	4e-04
352	gb|AY674461.1| Ranunculus sp. Qiu 95-024 phytochrome gene, parti...	54	4e-04
353	gb|AY674452.1| Daphniphyllum macropodum phytochrome gene, partia...	54	4e-04
354	gb|AY688953.1| Pisum sativum phytochrome A apoprotein (PHYA) gen...	54	4e-04
355	gb|AY425121.1| Neoscortechinia kingii PHYC (PHYC) gene, partial cds	54	4e-04
356	gb|AC149545.1| Populus trichocarpa clone Pop1-71J23, complete se...	54	4e-04
357	gb|AF216164.1| Salacia nitida clone 2 phytochrome B (PHYB) gene,...	54	4e-04
358	gb|AF216163.1| Salacia nitida clone 1 phytochrome B (PHYB) gene,...	54	4e-04
359	gb|AF216162.1| Salacia impressifolia clone 2 phytochrome B (PHYB...	54	4e-04
360	gb|AF216150.1| Psammomoya choretroides clone 1 phytochrome B (PH...	54	4e-04
361	gb|AF216144.1| Mortonia greggii clone 2 phytochrome B (PHYB) gen...	54	4e-04
362	gb|AF216143.1| Mortonia greggii clone 1 phytochrome B (PHYB) gen...	54	4e-04
363	gb|AF216137.1| Mortonia greggii clone 2 phytochrome B (PHYB) gen...	54	4e-04
364	gb|AF216133.1| Maytenus fournieri clone 2 phytochrome B (PHYB) g...	54	4e-04
365	gb|AF216132.1| Maytenus fournieri clone 1 phytochrome B (PHYB) g...	54	4e-04
366	emb|X14077.1|PSPHY Pea phy gene for phytochrome apoprotein	54	4e-04
367	dbj|AB206951.1| Thottea tomentosa PHYA gene for phytochrome A, p...	54	4e-04
368	dbj|AB206948.1| Aristolochia triactina PHYA gene for phytochrome...	54	4e-04
369	dbj|AB206947.1| Aristolochia promissa PHYA gene for phytochrome ...	54	4e-04
370	dbj|AB206930.1| Aristolochia gigantea PHYA gene for phytochrome ...	54	4e-04
371	dbj|AB206929.1| Aristolochia eriantha PHYA gene for phytochrome ...	54	4e-04
372	dbj|AB206928.1| Aristolochia eriantha PHYA gene for phytochrome ...	54	4e-04
373	gb|AF276732.1|AF276732 Lilium superbum phytochrome A (PHYA) gene...	54	4e-04
374	gb|AF276721.1|AF276721 Dioscorea elephantipes phytochrome C (PHY...	54	4e-04
375	gb|AF309806.1|AF309806 Populus balsamifera subsp. trichocarpa ph...	54	4e-04
376	gb|AY579831.1| Androstachys johnsonii isolate RS_PHY2 PHYC (PHYC...	54	4e-04
377	emb|AM233969.1| Lamourouxia rhinanthifolia partial phya gene for...	54	4e-04
378	emb|AM233957.1| Esterhazya campestris partial phya gene for phyt...	54	4e-04
379	emb|AM233954.1| Epifagus virginiana partial phya gene for phytoc...	54	4e-04
380	emb|AM234039.1| Epifagus virginiana partial phya gene for phytoc...	54	4e-04
381	emb|AM234022.1| Sopubia lanata partial phya gene for phytochrome...	54	4e-04
382	emb|AM234019.1| Seymeria laciniata partial phya gene for phytoch...	54	4e-04
383	gb|U78842.1|ABU78842 Austrosteensia blackii phytochrome A-like p...	54	4e-04
384	gb|U84970.1|LSU84970 Lathyrus sativus phytochrome type A (phyA) ...	54	4e-04
385	gb|U61215.1|PPU61215 Poa pratensis phytochrome (PHYC) gene, part...	54	4e-04
386	gb|U61207.1|OSU61207 Oryza sativa phytochrome (PHYC) gene, parti...	54	4e-04
387	emb|Y07571.1|CRPHYINTR C.revoluta gene for phytochrome (intron)	54	4e-04
388	gb|AY674449.1| Celastrus scandens phytochrome gene, partial cds	52	0.002
389	gb|AY674448.1| Carallia brachiata phytochrome gene, partial cds	52	0.002
390	gb|AY425129.1| Podostemum ceratophyllum PHYC (PHYC) gene, partia...	52	0.002
391	gb|AY425109.1| Hirtella bicornis PHYC (PHYC) gene, partial cds	52	0.002
392	gb|AY425088.1| Atuna racemosa PHYC (PHYC) gene, partial cds	52	0.002
393	gb|AY875314.1| Calymmanthium substerile phytochrome C (PHYC) gen...	52	0.002
394	gb|AY875294.1| Echinocactus platyacanthus phytochrome C (PHYC) g...	52	0.002
395	gb|AY875293.1| Cereus fernambucensis phytochrome C (PHYC) gene, ...	52	0.002
396	gb|AF216158.1| Reissantia indica phytochrome B (PHYB) gene, exon...	52	0.002
397	gb|AF216152.1| Pterocelastrus tricuspidatus phytochrome B (PHYB)...	52	0.002
398	gb|AF216109.1| Cuervea kappleriana phytochrome B (PHYB) gene, ex...	52	0.002
399	gb|AF216108.1| Cuervea integrifolia phytochrome B (PHYB) gene, e...	52	0.002
400	gb|AF216099.1| Canotia holacantha clone 1 phytochrome B (PHYB) g...	52	0.002
401	dbj|AB206970.1| Mougeotia scalaris PHY1 gene for phytochrome, co...	52	0.002
402	dbj|AB206965.1| Mougeotia scalaris PHY1 mRNA for phytochrome, co...	52	0.002
403	dbj|AB206941.1| Aristolochia pentandra PHYA gene for phytochrome...	52	0.002
404	dbj|AB206935.1| Aristolochia micrantha PHYA gene for phytochrome...	52	0.002
405	dbj|AB206924.1| Aristolochia burelae PHYA gene for phytochrome A...	52	0.002
406	gb|AY243497.1| Citrus limon R/FR photoreceptor (PhyA) mRNA, part...	52	0.002
407	gb|AF276744.1|AF276744 Smilax rotundifolia phytochrome C (PHYC) ...	52	0.002
408	gb|AF276731.1|AF276731 Lardizabala biternata phytochrome C (PHYC...	52	0.002
409	gb|AF276726.1|AF276726 Houttuynia cordata phytochrome A (PHYA) g...	52	0.002
410	gb|AF190071.1|AF190071 Cabomba sp. SM-1999 phytochrome C (PHYC) ...	52	0.002
411	emb|AJ286666.1|TNU286666 Torreya nucifera partial phyP gene for ...	52	0.002
412	emb|AJ286633.1|DFR286633 Dacrydium franklinii partial phyP gene ...	52	0.002
413	emb|AJ286628.1|CRE286628 Cycas revoluta partial phyP gene for ph...	52	0.002
414	emb|X95550.1|MSPHYTOCH M.scalaris mRNA for phytochrome	52	0.002
415	emb|AM233918.1| Lindenbergia sokotrana partial phya gene for phy...	52	0.002
416	emb|AM233985.1| Monochasma sheareri partial phya gene for phytoc...	52	0.002
417	emb|AM233976.1| Lindenbergia indica partial phya gene for phytoc...	52	0.002
418	emb|AM234042.1| Monochasma sheareri partial phya gene for phytoc...	52	0.002
419	gb|U61198.1|DUU61198 Danthonia unispicata phytochrome (PHYC) gen...	52	0.002
420	gb|AY396708.1| Euptelea polyandra phytochrome C (PHYC) gene, par...	50	0.006
421	gb|AF216124.1| Gymnosporia polyacantha clone 1 phytochrome B (PH...	50	0.006
422	gb|U08149.1|CLU08149 Calamovilfa longifolia phytochrome (PHYC) g...	50	0.006
423	gb|AF137296.1| Capillipedium parviflorum phytochrome B (PHYB) ge...	50	0.006
424	gb|AF443800.1| Bothriochloa odorata phytochrome B (PHYB) gene, p...	50	0.006
425	dbj|AB206931.1| Aristolochia grandiflora PHYA gene for phytochro...	50	0.006
426	gb|AF276736.1|AF276736 Pleea tenuifolia phytochrome C (PHYC) gen...	50	0.006
427	gb|AF190107.1|AF190107 Saururus cernuus phytochrome C (PHYC) gen...	50	0.006
428	gb|AF190101.1|AF190101 Piper nigrum phytochrome C (PHYC) gene, p...	50	0.006
429	gb|AF190095.1|AF190095 Magnolia X soulangeana phytochrome C (PHY...	50	0.006
430	gb|AF190090.1|AF190090 Idiospermum australiense phytochrome C (P...	50	0.006
431	gb|AF190073.1|AF190073 Calycanthus floridus phytochrome C (PHYC)...	50	0.006
432	gb|AF190067.1|AF190067 Aquilegia sp. SM-1999 phytochrome C (PHYC...	50	0.006
433	emb|AJ286682.1|ORE286682 Osmunda regalis partial phy1B gene for ...	50	0.006
434	emb|AJ286645.1|PSY286645 Pinus sylvestris partial phyO gene for ...	50	0.006
435	emb|AM233953.1| Cymbaria mongolica partial phya gene for phytoch...	50	0.006
436	emb|AM233944.1| Castilleja fissifolia partial phya gene for phyt...	50	0.006
437	emb|AM233941.1| Castilleja miniata partial phya gene for phytoch...	50	0.006
438	emb|AM233937.1| Castilleja crista-galli partial phya gene for ph...	50	0.006
439	emb|AM233936.1| Bungea trifida partial phya gene for phytochrome...	50	0.006
440	emb|AM233934.1| Brandisia hancei partial phya gene for phytochro...	50	0.006
441	emb|AM234044.1| Radamaea montana partial phya gene for phytochro...	50	0.006
442	emb|AM234032.1| Triphysaria pusilla partial phya gene for phytoc...	50	0.006
443	emb|AM234020.1| Siphonostegia chinensis partial phya gene for ph...	50	0.006
444	emb|AM234011.1| Radamaea montana partial phya gene for phytochro...	50	0.006
445	gb|U32345.1|SLU32345 Solanum lycopersicum phytochrome A (PHYA) g...	50	0.006
446	gb|U78825.1|ECU78825 Enterolobium cyclocarpum phytochrome A (PHY...	50	0.006
447	gb|U38366.1|PAU38366 Picea abies phytochrome (phy4) gene, partia...	50	0.006
448	emb|X80295.1|GPGPHYTO G.gnemon gene for phytochrome	50	0.006
449	gb|AY425099.1| Dillenia philippinensis PHYC (PHYC) gene, partial...	48	0.025
450	gb|AY875316.1| Talinum paniculatum phytochrome C (PHYC) gene, pa...	48	0.025
451	gb|AF216151.1| Psammomoya choretroides clone 2 phytochrome B (PH...	48	0.025
452	gb|AF216136.1| Mortonia greggii clone 1 phytochrome B (PHYB) gen...	48	0.025
453	gb|AF216121.1| Gyminda tonduzii phytochrome B (PHYB) gene, exon ...	48	0.025
454	gb|AF443813.1| Microstegium nudum phytochrome B (PHYB) gene, par...	48	0.025
455	gb|AF443804.1| Cleistachne sorghoides phytochrome B (PHYB) gene,...	48	0.025
456	gb|AF406754.1|AF406754 Prunus persica phytochrome B (PHYB) gene,...	48	0.025
457	gb|AF190109.1|AF190109 Trochodendron aralioides phytochrome C (P...	48	0.025
458	emb|Y13796.1|TBPHYTOCH Taxus baccata phytochrome gene (partial)	48	0.025
459	emb|AJ310934.1|EFO310934 Ephedra foeminea partial phyN gene for ...	48	0.025
460	emb|X80292.1|EMPHYCHR E.major gene for phytochrome	48	0.025
461	gb|AY924378.1| Olea europaea red/far-red photoreceptor (phyA) mR...	48	0.025
462	gb|U78069.1|DNU78069 Dalbergiella nyasae phytochrome A-like prot...	48	0.025
463	emb|AM233952.1| Cycnium adonense partial phya gene for phytochro...	48	0.025
464	emb|AM233950.1| Conopholis americana partial phya gene for phyto...	48	0.025
465	gb|AF014159.1|AF014159 Solanum tuberosum phytochrome B2 (POTPHYB...	48	0.025
466	gb|U78845.1|PRU78845 Platycyamus regnellii phytochrome A-like pr...	48	0.025
467	gb|U78822.1|GDU78822 Gymnocladus dioica phytochrome A (PHYA) gen...	48	0.025
468	gb|U61192.1|BGU61192 Bouteloua gracilis phytochrome (PHYC) gene,...	48	0.025
469	dbj|AP006687.1| Lotus japonicus genomic DNA, chromosome 6, clone...	48	0.025
470	gb|AY396712.1| Meliosma squamulata phytochrome C (PHYC) gene, pa...	46	0.097
471	gb|AY396706.1| Buxus sempervirens phytochrome C (PHYC) gene, par...	46	0.097
472	gb|AY123146.1| Physcomitrella patens phytochrome (phy1) gene, co...	46	0.097
473	gb|AY674459.1| Meliosma squamulata phytochrome gene, partial cds	46	0.097
474	gb|AY674454.1| Gunnera monoica phytochrome gene, partial cds	46	0.097
475	gb|AY425131.1| Stackhousia minima PHYC (PHYC) gene, partial cds	46	0.097
476	gb|AY425130.1| Quiina pteridophylla PHYC (PHYC) gene, partial cds	46	0.097
477	gb|AY425090.1| Balanops vieillardi PHYC (PHYC) gene, partial cds	46	0.097
478	gb|AF216167.1| Schaefferia frutescens clone 2 phytochrome B (PHY...	46	0.097
479	gb|AF216166.1| Schaefferia frutescens clone 1 phytochrome B (PHY...	46	0.097
480	gb|AF216160.1| Rzedowskia tolantonguensis clone 2 phytochrome B ...	46	0.097
481	gb|AF216159.1| Rzedowskia tolantonguensis clone 1 phytochrome B ...	46	0.097
482	gb|AF216154.1| Putterlickia verrucosa clone 2 phytochrome B (PHY...	46	0.097
483	gb|AF216153.1| Putterlickia verrucosa clone 1 phytochrome B (PHY...	46	0.097
484	gb|AF216148.1| Pristimera andina clone 1 phytochrome B (PHYB) ge...	46	0.097
485	gb|AF216131.1| Loeseneriella africana clone 3 phytochrome B (PHY...	46	0.097
486	gb|AF216130.1| Loeseneriella africana clone 2 phytochrome B (PHY...	46	0.097
487	gb|AF216129.1| Loeseneriella africana clone 1 phytochrome B (PHY...	46	0.097
488	gb|AF216128.1| Hippocratea volubilis clone 3 phytochrome B (PHYB...	46	0.097
489	gb|AF216127.1| Hippocratea volubilis clone 2 phytochrome B (PHYB...	46	0.097
490	gb|AF216125.1| Gymnosporia polyacantha clone 2 phytochrome B (PH...	46	0.097
491	gb|AF216123.1| Gymnosporia mossambicensis clone 2 phytochrome B ...	46	0.097
492	gb|AF216122.1| Gymnosporia mossambicensis clone 1 phytochrome B ...	46	0.097
493	gb|AF216117.1| Elaeodendron xylocarpum clone 2 phytochrome B (PH...	46	0.097
494	gb|AF216116.1| Elaeodendron xylocarpum clone 1 phytochrome B (PH...	46	0.097
495	gb|AF216101.1| Catha edulis phytochrome B (PHYB) gene, exon 1 an...	46	0.097
496	gb|AF216098.1| Campylostemon angolense clone 2 phytochrome B (PH...	46	0.097
497	gb|AF216097.1| Campylostemon angolense clone 1 phytochrome B (PH...	46	0.097
498	gb|AF216092.1| Averrhoa carambola clone 2 phytochrome B (PHYB) g...	46	0.097
499	gb|AF216091.1| Averrhoa carambola clone 1 phytochrome B (PHYB) g...	46	0.097
500	gb|AF500525.1| Diacidia ferruginea phytochrome C (PHYC) gene, pa...	46	0.097

---

>gb|DQ201141.1| Hordeum vulgare subsp. vulgare cultivar Kompolti korai phytochrome A
            (PhyA) gene, complete cds
          Length = 6659

 Score =  874 bits (441), Expect = 0.0
 Identities = 444/445 (99%)
 Strand = Plus / Plus

                                                                        
Query: 1    agtctttgaacttacagggtatgatagggttatggcttacaagttccatgaagataacca 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2410 agtctttgaacttacagggtatgatagggttatggcttacaagttccatgaagataacca 2469

                                                                        
Query: 61   tggcgaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcacta 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2470 tggcgaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcacta 2529

                                                                        
Query: 121  tccagccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggat 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2530 tccagccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggat 2589

                                                                        
Query: 181  gatttgcgatgtccgcgcaagaaccctaaaggtcatcgaagatgaggcactcccctttga 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2590 gatttgcgatgtccgcgcaagaaccctaaaggtcatcgaagatgaggcactcccctttga 2649

                                                                        
Query: 241  tattagcttgtgtggttcatcactcagggcagcacacagctgtcaccttcagtatatgga 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2650 tattagcttgtgtggttcatcactcagggcagcacacagctgtcaccttcagtatatgga 2709

                                                                        
Query: 301  gaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgagagtgaagagga 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2710 gaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgagagtgaagagga 2769

                                                                        
Query: 361  cgacgaggccgagtccgaacaaccagcacagcagcagaagaagaagatactatggggcct 420
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2770 tgacgaggccgagtccgaacaaccagcacagcagcagaagaagaagatactatggggcct 2829

                                     
Query: 421  tgttgtttgccaccatgagagcccc 445
            |||||||||||||||||||||||||
Sbjct: 2830 tgttgtttgccaccatgagagcccc 2854

---

>gb|DQ201140.1| Hordeum vulgare subsp. vulgare cultivar Morex phytochrome A (PhyA)
            gene, complete cds
          Length = 6652

 Score =  866 bits (437), Expect = 0.0
 Identities = 443/445 (99%)
 Strand = Plus / Plus

                                                                        
Query: 1    agtctttgaacttacagggtatgatagggttatggcttacaagttccatgaagataacca 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2410 agtctttgaacttacagggtatgatagggttatggcttacaagttccatgaagataacca 2469

                                                                        
Query: 61   tggcgaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcacta 120
            ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2470 tggcgaggtctttgctgagatcacaaagcctggccttgagccttatctcggcctgcacta 2529

                                                                        
Query: 121  tccagccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggat 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2530 tccagccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggat 2589

                                                                        
Query: 181  gatttgcgatgtccgcgcaagaaccctaaaggtcatcgaagatgaggcactcccctttga 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2590 gatttgcgatgtccgcgcaagaaccctaaaggtcatcgaagatgaggcactcccctttga 2649

                                                                        
Query: 241  tattagcttgtgtggttcatcactcagggcagcacacagctgtcaccttcagtatatgga 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2650 tattagcttgtgtggttcatcactcagggcagcacacagctgtcaccttcagtatatgga 2709

                                                                        
Query: 301  gaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgagagtgaagagga 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2710 gaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgagagtgaagagga 2769

                                                                        
Query: 361  cgacgaggccgagtccgaacaaccagcacagcagcagaagaagaagatactatggggcct 420
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2770 tgacgaggccgagtccgaacaaccagcacagcagcagaagaagaagatactatggggcct 2829

                                     
Query: 421  tgttgtttgccaccatgagagcccc 445
            |||||||||||||||||||||||||
Sbjct: 2830 tgttgtttgccaccatgagagcccc 2854

---

>gb|DQ201139.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo phytochrome A (PhyA)
            gene, complete cds
          Length = 6652

 Score =  866 bits (437), Expect = 0.0
 Identities = 443/445 (99%)
 Strand = Plus / Plus

                                                                        
Query: 1    agtctttgaacttacagggtatgatagggttatggcttacaagttccatgaagataacca 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2410 agtctttgaacttacagggtatgatagggttatggcttacaagttccatgaagataacca 2469

                                                                        
Query: 61   tggcgaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcacta 120
            ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2470 tggcgaggtctttgctgagatcacaaagcctggccttgagccttatctcggcctgcacta 2529

                                                                        
Query: 121  tccagccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggat 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2530 tccagccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggat 2589

                                                                        
Query: 181  gatttgcgatgtccgcgcaagaaccctaaaggtcatcgaagatgaggcactcccctttga 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2590 gatttgcgatgtccgcgcaagaaccctaaaggtcatcgaagatgaggcactcccctttga 2649

                                                                        
Query: 241  tattagcttgtgtggttcatcactcagggcagcacacagctgtcaccttcagtatatgga 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2650 tattagcttgtgtggttcatcactcagggcagcacacagctgtcaccttcagtatatgga 2709

                                                                        
Query: 301  gaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgagagtgaagagga 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2710 gaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgagagtgaagagga 2769

                                                                        
Query: 361  cgacgaggccgagtccgaacaaccagcacagcagcagaagaagaagatactatggggcct 420
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2770 tgacgaggccgagtccgaacaaccagcacagcagcagaagaagaagatactatggggcct 2829

                                     
Query: 421  tgttgtttgccaccatgagagcccc 445
            |||||||||||||||||||||||||
Sbjct: 2830 tgttgtttgccaccatgagagcccc 2854

---

>emb|AJ313100.1|TAE313100 Triticum aestivum partial phya2 gene for phytochrome A, exons 1-2
          Length = 2645

 Score =  747 bits (377), Expect = 0.0
 Identities = 428/445 (96%)
 Strand = Plus / Plus

                                                                       
Query: 1   agtctttgaacttacagggtatgatagggttatggcttacaagttccatgaagataacca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtctttgaacttacagggtatgatagggttatggcttacaagttccatgaagataacca 500

                                                                       
Query: 61  tggcgaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcacta 120
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 501 tggcgaggtctttgccgagatcacaaagcctggccttgagccttatctgggcctgcacta 560

                                                                       
Query: 121 tccagccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggat 180
           |||||||||||||||||||||||| || ||||| || |||||||||||||||||||||||
Sbjct: 561 tccagccactgatatccctcaagcggccaggttccttttcatgaagaacaaagtgcggat 620

                                                                       
Query: 181 gatttgcgatgtccgcgcaagaaccctaaaggtcatcgaagatgaggcactcccctttga 240
           |||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 621 gatttgcgatgtccgctcaagatccataaaggtcatcgaagatgaggcactcccctttga 680

                                                                       
Query: 241 tattagcttgtgtggttcatcactcagggcagcacacagctgtcaccttcagtatatgga 300
           ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tattagcttgtgtggttcagcgctcagggcagcacacagctgtcaccttcagtatatgga 740

                                                                       
Query: 301 gaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgagagtgaagagga 360
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 741 gaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgagaatgaagagga 800

                                                                       
Query: 361 cgacgaggccgagtccgaacaaccagcacagcagcagaagaagaagatactatggggcct 420
            ||||||| || ||| ||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 801 tgacgaggtcgggtctgaacaaccagcacagcagcagcagaagaagatactgtggggcct 860

                                    
Query: 421 tgttgtttgccaccatgagagcccc 445
           |||||||||||||||||||||||||
Sbjct: 861 tgttgtttgccaccatgagagcccc 885

---

>emb|AJ313099.1|TAE313099 Triticum aestivum phya1 gene for phytochrome A, exons 1-4
          Length = 6323

 Score =  729 bits (368), Expect = 0.0
 Identities = 425/444 (95%)
 Strand = Plus / Plus

                                                                        
Query: 1    agtctttgaacttacagggtatgatagggttatggcttacaagttccatgaagataacca 60
            ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2580 agtctttgaccttacagggtatgatagggttatggcttacaagtttcatgaagataacca 2639

                                                                        
Query: 61   tggcgaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcacta 120
            |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2640 tggcgaggtcttcgccgagatcacaaagcctggccttgagccttatctgggcctgcacta 2699

                                                                        
Query: 121  tccagccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggat 180
            ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |
Sbjct: 2700 tccagccactgatatccctcaagcagccaggtttcttttcatgaagaacaaagtgcggct 2759

                                                                        
Query: 181  gatttgcgatgtccgcgcaagaaccctaaaggtcatcgaagatgaggcactcccctttga 240
            ||| |||||||||||||||||| || |||||||||| |||||||||||||||||||||||
Sbjct: 2760 gatctgcgatgtccgcgcaagacccataaaggtcattgaagatgaggcactcccctttga 2819

                                                                        
Query: 241  tattagcttgtgtggttcatcactcagggcagcacacagctgtcaccttcagtatatgga 300
            ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 2820 tattagcttgtgtggttcagcactcagggcagcacacagctgtcaccttcagtatatgga 2879

                                                                        
Query: 301  gaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgagagtgaagagga 360
            |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 2880 gaacatgaactcaattgcatcccttgtcatggctgttgtggttaatgagaatgaagagga 2939

                                                                        
Query: 361  cgacgaggccgagtccgaacaaccagcacagcagcagaagaagaagatactatggggcct 420
             ||||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2940 tgacgaggtcgggtctgaacaaccagcacagcagcagaagaagaagatactatggggcct 2999

                                    
Query: 421  tgttgtttgccaccatgagagccc 444
            | ||||||||||||||||||||||
Sbjct: 3000 tattgtttgccaccatgagagccc 3023

---

>emb|X03243.1|ASAP4R Avena sativa mRNA for phytochrome (AP4)
          Length = 3705

 Score =  605 bits (305), Expect = e-170
 Identities = 410/445 (92%)
 Strand = Plus / Plus

                                                                        
Query: 1    agtctttgaacttacagggtatgatagggttatggcttacaagttccatgaagataacca 60
            ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 741  agtctttgaccttaccgggtatgatagggttatggcttacaagttccatgaagatgacca 800

                                                                        
Query: 61   tggcgaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcacta 120
            ||| |||||||| ||||| |||||||||||||| |||||||||||||| |||||||||||
Sbjct: 801  tggtgaggtcttcgccgaaatcacaaagcctggtcttgagccttatctaggcctgcacta 860

                                                                        
Query: 121  tccagccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggat 180
            ||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||
Sbjct: 861  tccagccactgatatccctcaagcagccaggtttcttttcatgaagaacaaagtacggat 920

                                                                        
Query: 181  gatttgcgatgtccgcgcaagaaccctaaaggtcatcgaagatgaggcactcccctttga 240
            |||||| |||  ||| || ||| || ||||||||||||||| ||||||||||||||||||
Sbjct: 921  gatttgtgattgccgtgcgagatccataaaggtcatcgaagctgaggcactcccctttga 980

                                                                        
Query: 241  tattagcttgtgtggttcatcactcagggcagcacacagctgtcaccttcagtatatgga 300
            ||||||| ||||||||||| |||| |||||| |||| || ||||||||||||||||||||
Sbjct: 981  tattagcctgtgtggttcagcactaagggcaccacatagttgtcaccttcagtatatgga 1040

                                                                        
Query: 301  gaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgagagtgaagagga 360
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1041 gaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgagaatgaagagga 1100

                                                                        
Query: 361  cgacgaggccgagtccgaacaaccagcacagcagcagaagaagaagatactatggggcct 420
             || || || ||||| ||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 1101 tgatgaagctgagtctgaacaaccagcacagcagcagcagaagaagaaactatggggcct 1160

                                     
Query: 421  tgttgtttgccaccatgagagcccc 445
              |||||||||||||||||||||||
Sbjct: 1161 ccttgtttgccaccatgagagcccc 1185

---

>emb|X03244.1|ASAP5R Avena sativa mRNA fragment for phytochrome (AP5)
          Length = 1623

 Score =  587 bits (296), Expect = e-164
 Identities = 407/444 (91%)
 Strand = Plus / Plus

                                                                        
Query: 1    agtctttgaacttacagggtatgatagggttatggcttacaagttccatgaagataacca 60
            ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 820  agtctttgaccttaccgggtatgatagggttatggcttacaagttccatgaagatgacca 879

                                                                        
Query: 61   tggcgaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcacta 120
            ||| ||||| ||  |||| |||||||||||||| |||||||||||||| |||||||||||
Sbjct: 880  tggtgaggtattctccgaaatcacaaagcctggtcttgagccttatctaggcctgcacta 939

                                                                        
Query: 121  tccagccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggat 180
            ||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||
Sbjct: 940  tccagccactgatatccctcaagcagccaggtttcttttcatgaagaacaaagtacggat 999

                                                                        
Query: 181  gatttgcgatgtccgcgcaagaaccctaaaggtcatcgaagatgaggcactcccctttga 240
            |||||| |||  ||| || ||| || |||||||||| |||| ||||||||||||||||||
Sbjct: 1000 gatttgtgattgccgtgcgagatccataaaggtcattgaagctgaggcactcccctttga 1059

                                                                        
Query: 241  tattagcttgtgtggttcatcactcagggcagcacacagctgtcaccttcagtatatgga 300
            ||||||| | ||||||||| ||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 1060 tattagcctatgtggttcagcactcagggcaccacacagttgtcaccttcagtatatgga 1119

                                                                        
Query: 301  gaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgagagtgaagagga 360
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1120 gaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgagaatgaagagga 1179

                                                                        
Query: 361  cgacgaggccgagtccgaacaaccagcacagcagcagaagaagaagatactatggggcct 420
             || || || ||||| ||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 1180 tgatgaagctgagtctgaacaaccagcacagcagcagaaaaagaagaaactatggggcct 1239

                                    
Query: 421  tgttgtttgccaccatgagagccc 444
              ||||||||||||||||||||||
Sbjct: 1240 ccttgtttgccaccatgagagccc 1263

---

>gb|U08166.1|HVU08166 Hordeum vulgare phytochrome (PHYA) gene, partial cds
          Length = 336

 Score =  585 bits (295), Expect = e-164
 Identities = 310/315 (98%)
 Strand = Plus / Plus

                                                                       
Query: 131 gatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgatttgcgat 190
           |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gatatccctcaagcagctacctttctgttcatgaagaacaaagtgcggatgatttgcgat 60

                                                                       
Query: 191 gtccgcgcaagaaccctaaaggtcatcgaagatgaggcactcccctttgatattagcttg 250
           ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||
Sbjct: 61  gtccgcgcaagaaccctaaaggtcatcgccgatgaggcactcccctttgatattagcttg 120

                                                                       
Query: 251 tgtggttcatcactcagggcagcacacagctgtcaccttcagtatatggagaacatgaac 310
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgtggttcatcactcagggcagcacacagctgtcaccttcagtatatggagaacatgaac 180

                                                                       
Query: 311 tcgattgcatcccttgtcatggctgttgtggttaatgagagtgaagaggacgacgaggcc 370
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 181 tcgattgcatcccttgtcatggctgttgtggttaatgagagtgaagaggatgacgaggcc 240

                                                                       
Query: 371 gagtccgaacaaccagcacagcagcagaagaagaagatactatggggccttgttgtttgc 430
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gagtccgaacaaccagcacagcagcagaagaagaagatactatggggccttgttgtttgc 300

                          
Query: 431 caccatgagagcccc 445
           |||||||||||||||
Sbjct: 301 caccatgagagcccc 315

---

>gb|M18822.1|ASTPHT3A Avena sativa type 3 phytochrome gene (phy3), complete cds
          Length = 6746

 Score =  565 bits (285), Expect = e-158
 Identities = 405/445 (91%)
 Strand = Plus / Plus

                                                                        
Query: 1    agtctttgaacttacagggtatgatagggttatggcttacaagttccatgaagataacca 60
            ||||||||| ||||| |||||||| |||||||||||||||||||| ||||||||| ||||
Sbjct: 3041 agtctttgaccttaccgggtatgacagggttatggcttacaagtttcatgaagatgacca 3100

                                                                        
Query: 61   tggcgaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcacta 120
            ||| ||||| ||  |||| |||||||||||||| |||||||||||||| |||||||||||
Sbjct: 3101 tggtgaggtattctccgaaatcacaaagcctggtcttgagccttatctaggcctgcacta 3160

                                                                        
Query: 121  tccagccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggat 180
            |||||||||||| |||||||||||||| |||||||| ||||||||||||||||| |||||
Sbjct: 3161 tccagccactgacatccctcaagcagccaggtttcttttcatgaagaacaaagtacggat 3220

                                                                        
Query: 181  gatttgcgatgtccgcgcaagaaccctaaaggtcatcgaagatgaggcactcccctttga 240
            |||||| |||  ||| || ||| || |||||||||| |||| ||||||||||||||||||
Sbjct: 3221 gatttgtgattgccgtgcgagatccataaaggtcattgaagctgaggcactcccctttga 3280

                                                                        
Query: 241  tattagcttgtgtggttcatcactcagggcagcacacagctgtcaccttcagtatatgga 300
            ||||||| | ||||||||| ||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 3281 tattagcctatgtggttcagcactcagggcaccacacagttgtcaccttcagtatatgga 3340

                                                                        
Query: 301  gaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgagagtgaagagga 360
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 3341 gaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgagaatgaagagga 3400

                                                                        
Query: 361  cgacgaggccgagtccgaacaaccagcacagcagcagaagaagaagatactatggggcct 420
             || || || ||||| ||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 3401 tgatgaagctgagtctgaacaaccagcacagcagcagaaaaagaagaaactatggggcct 3460

                                     
Query: 421  tgttgtttgccaccatgagagcccc 445
              |||||||||||||||||||||||
Sbjct: 3461 ccttgtttgccaccatgagagcccc 3485

---

>emb|X03242.1|ASAP3R Avena sativa mRNA for phytochrome (AP3)
          Length = 3696

 Score =  549 bits (277), Expect = e-153
 Identities = 403/445 (90%)
 Strand = Plus / Plus

                                                                        
Query: 1    agtctttgaacttacagggtatgatagggttatggcttacaagttccatgaagataacca 60
            ||||||||| ||||| |||||||| |||||||||||||||||||| ||||||||| ||||
Sbjct: 741  agtctttgaccttaccgggtatgacagggttatggcttacaagtttcatgaagatgacca 800

                                                                        
Query: 61   tggcgaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcacta 120
            ||| ||||| ||  |||| |||||||||||||| |||||||||||||| |||||||||||
Sbjct: 801  tggtgaggtattctccgaaatcacaaagcctggtcttgagccttatctaggcctgcacta 860

                                                                        
Query: 121  tccagccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggat 180
            |||||||||||| |||||||||||||| ||| |||| ||||||||||||||||| |||||
Sbjct: 861  tccagccactgacatccctcaagcagccaggcttcttttcatgaagaacaaagtacggat 920

                                                                        
Query: 181  gatttgcgatgtccgcgcaagaaccctaaaggtcatcgaagatgaggcactcccctttga 240
            |||||| |||  ||| || ||| || |||||||||| || | ||||||||||||||||||
Sbjct: 921  gatttgtgattgccgtgcgagatccataaaggtcattgaggctgaggcactcccctttga 980

                                                                        
Query: 241  tattagcttgtgtggttcatcactcagggcagcacacagctgtcaccttcagtatatgga 300
            ||||||| | ||||||||| ||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 981  tattagcctatgtggttcagcactcagggcaccacacagttgtcaccttcagtatatgga 1040

                                                                        
Query: 301  gaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgagagtgaagagga 360
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1041 gaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgagaatgaagagga 1100

                                                                        
Query: 361  cgacgaggccgagtccgaacaaccagcacagcagcagaagaagaagatactatggggcct 420
             || || || ||||| ||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 1101 tgatgaagctgagtctgaacaaccagcacagcagcagaaaaagaagaaactatggggcct 1160

                                     
Query: 421  tgttgtttgccaccatgagagcccc 445
              |||||||||||||||||||||||
Sbjct: 1161 ccttgtttgccaccatgagagcccc 1185

---

>gb|AY466083.1| Sorghum propinquum phytochrome A (PHYA) gene, complete cds
          Length = 3834

 Score =  430 bits (217), Expect = e-117
 Identities = 388/445 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1    agtctttgaacttacagggtatgatagggttatggcttacaagttccatgaagataacca 60
            ||||||||| |||||||| ||||| |||||||||||||||||||||||||||||| | ||
Sbjct: 690  agtctttgagcttacaggttatgacagggttatggcttacaagttccatgaagatgagca 749

                                                                        
Query: 61   tggcgaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcacta 120
            ||| ||||||||||| |||||||| || |||||  |||| |||||||| |||||||||||
Sbjct: 750  tggggaggtctttgctgagatcaccaaacctggtattgaaccttatctaggcctgcacta 809

                                                                        
Query: 121  tccagccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggat 180
            |||||||||||||||||||||||| || |||||||| |||||||||||||||||  | ||
Sbjct: 810  tccagccactgatatccctcaagctgccaggtttctcttcatgaagaacaaagtcagaat 869

                                                                        
Query: 181  gatttgcgatgtccgcgcaagaaccctaaaggtcatcgaagatgaggcactcccctttga 240
            ||| || |||  ||| |||| | |  | ||| | || ||||||||||||||| || ||||
Sbjct: 870  gatctgtgattgccgtgcaaaatctgtgaagattattgaagatgaggcactctccattga 929

                                                                        
Query: 241  tattagcttgtgtggttcatcactcagggcagcacacagctgtcaccttcagtatatgga 300
            ||||||||||||||||||| | || || ||| |||| |||||||||||||||||||||||
Sbjct: 930  tattagcttgtgtggttcaactcttagagcaccacatagctgtcaccttcagtatatgga 989

                                                                        
Query: 301  gaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgagagtgaagagga 360
            |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 990  gaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgaaaatgaagagga 1049

                                                                        
Query: 361  cgacgaggccgagtccgaacaaccagcacagcagcagaagaagaagatactatggggcct 420
             || ||  | | | ||||||||||| |||| |||||||||||||||| ||| ||||| ||
Sbjct: 1050 tgatgaacctgggcccgaacaaccaccacaacagcagaagaagaagagactgtggggtct 1109

                                     
Query: 421  tgttgtttgccaccatgagagcccc 445
              |||||||||||||||| ||||||
Sbjct: 1110 cattgtttgccaccatgaaagcccc 1134

---

>gb|AY466082.1| Sorghum x drummondii voucher PI302233 phytochrome A (PHYA) gene,
            complete cds
          Length = 3834

 Score =  430 bits (217), Expect = e-117
 Identities = 388/445 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1    agtctttgaacttacagggtatgatagggttatggcttacaagttccatgaagataacca 60
            ||||||||| |||||||| ||||| |||||||||||||||||||||||||||||| | ||
Sbjct: 690  agtctttgagcttacaggttatgacagggttatggcttacaagttccatgaagatgagca 749

                                                                        
Query: 61   tggcgaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcacta 120
            ||| ||||||||||| |||||||| || |||||  |||| |||||||| |||||||||||
Sbjct: 750  tggggaggtctttgctgagatcaccaaacctggtattgaaccttatctaggcctgcacta 809

                                                                        
Query: 121  tccagccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggat 180
            |||||||||||||||||||||||| || |||||||| |||||||||||||||||  | ||
Sbjct: 810  tccagccactgatatccctcaagctgccaggtttctcttcatgaagaacaaagtcagaat 869

                                                                        
Query: 181  gatttgcgatgtccgcgcaagaaccctaaaggtcatcgaagatgaggcactcccctttga 240
            ||| || |||  ||| |||| | |  | ||| | || ||||||||||||||| || ||||
Sbjct: 870  gatctgtgattgccgtgcaaaatctgtgaagattattgaagatgaggcactctccattga 929

                                                                        
Query: 241  tattagcttgtgtggttcatcactcagggcagcacacagctgtcaccttcagtatatgga 300
            ||||||||||||||||||| | || || ||| |||| |||||||||||||||||||||||
Sbjct: 930  tattagcttgtgtggttcaactcttagagcaccacatagctgtcaccttcagtatatgga 989

                                                                        
Query: 301  gaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgagagtgaagagga 360
            |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 990  gaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgaaaatgaagagga 1049

                                                                        
Query: 361  cgacgaggccgagtccgaacaaccagcacagcagcagaagaagaagatactatggggcct 420
             || ||  | | | ||||||||||| |||| |||||||||||||||| ||| ||||| ||
Sbjct: 1050 tgatgaacctgggcccgaacaaccaccacaacagcagaagaagaagagactgtggggtct 1109

                                     
Query: 421  tgttgtttgccaccatgagagcccc 445
              |||||||||||||||| ||||||
Sbjct: 1110 cattgtttgccaccatgaaagcccc 1134

---

>gb|AY466081.1| Sorghum arundinaceum voucher PI302233 phytochrome A (PHYA) gene,
            complete cds
          Length = 3834

 Score =  430 bits (217), Expect = e-117
 Identities = 388/445 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1    agtctttgaacttacagggtatgatagggttatggcttacaagttccatgaagataacca 60
            ||||||||| |||||||| ||||| |||||||||||||||||||||||||||||| | ||
Sbjct: 690  agtctttgagcttacaggttatgacagggttatggcttacaagttccatgaagatgagca 749

                                                                        
Query: 61   tggcgaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcacta 120
            ||| ||||||||||| |||||||| || |||||  |||| |||||||| |||||||||||
Sbjct: 750  tggggaggtctttgctgagatcaccaaacctggtattgaaccttatctaggcctgcacta 809

                                                                        
Query: 121  tccagccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggat 180
            |||||||||||||||||||||||| || |||||||| |||||||||||||||||  | ||
Sbjct: 810  tccagccactgatatccctcaagctgccaggtttctcttcatgaagaacaaagtcagaat 869

                                                                        
Query: 181  gatttgcgatgtccgcgcaagaaccctaaaggtcatcgaagatgaggcactcccctttga 240
            ||| || |||  ||| |||| | |  | ||| | || ||||||||||||||| || ||||
Sbjct: 870  gatctgtgattgccgtgcaaaatctgtgaagattattgaagatgaggcactctccattga 929

                                                                        
Query: 241  tattagcttgtgtggttcatcactcagggcagcacacagctgtcaccttcagtatatgga 300
            ||||||||||||||||||| | || || ||| |||| |||||||||||||||||||||||
Sbjct: 930  tattagcttgtgtggttcaactcttagagcaccacatagctgtcaccttcagtatatgga 989

                                                                        
Query: 301  gaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgagagtgaagagga 360
            |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 990  gaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgaaaatgaagagga 1049

                                                                        
Query: 361  cgacgaggccgagtccgaacaaccagcacagcagcagaagaagaagatactatggggcct 420
             || ||  | | | ||||||||||| |||| |||||||||||||||| ||| ||||| ||
Sbjct: 1050 tgatgaacctgggcccgaacaaccaccacaacagcagaagaagaagagactgtggggtct 1109

                                     
Query: 421  tgttgtttgccaccatgagagcccc 445
              |||||||||||||||| ||||||
Sbjct: 1110 cattgtttgccaccatgaaagcccc 1134

---

>gb|AY466080.1| Sorghum arundinaceum voucher PI225905 phytochrome A (PHYA) gene,
            complete cds
          Length = 3834

 Score =  430 bits (217), Expect = e-117
 Identities = 388/445 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1    agtctttgaacttacagggtatgatagggttatggcttacaagttccatgaagataacca 60
            ||||||||| |||||||| ||||| |||||||||||||||||||||||||||||| | ||
Sbjct: 690  agtctttgagcttacaggttatgacagggttatggcttacaagttccatgaagatgagca 749

                                                                        
Query: 61   tggcgaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcacta 120
            ||| ||||||||||| |||||||| || |||||  |||| |||||||| |||||||||||
Sbjct: 750  tggggaggtctttgctgagatcaccaaacctggtattgaaccttatctaggcctgcacta 809

                                                                        
Query: 121  tccagccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggat 180
            |||||||||||||||||||||||| || |||||||| |||||||||||||||||  | ||
Sbjct: 810  tccagccactgatatccctcaagctgccaggtttctcttcatgaagaacaaagtcagaat 869

                                                                        
Query: 181  gatttgcgatgtccgcgcaagaaccctaaaggtcatcgaagatgaggcactcccctttga 240
            ||| || |||  ||| |||| | |  | ||| | || ||||||||||||||| || ||||
Sbjct: 870  gatctgtgattgccgtgcaaaatctgtgaagattattgaagatgaggcactctccattga 929

                                                                        
Query: 241  tattagcttgtgtggttcatcactcagggcagcacacagctgtcaccttcagtatatgga 300
            ||||||||||||||||||| | || || ||| |||| |||||||||||||||||||||||
Sbjct: 930  tattagcttgtgtggttcaactcttagagcaccacatagctgtcaccttcagtatatgga 989

                                                                        
Query: 301  gaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgagagtgaagagga 360
            |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 990  gaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgaaaatgaagagga 1049

                                                                        
Query: 361  cgacgaggccgagtccgaacaaccagcacagcagcagaagaagaagatactatggggcct 420
             || ||  | | | ||||||||||| |||| |||||||||||||||| ||| ||||| ||
Sbjct: 1050 tgatgaacctgggcccgaacaaccaccacaacagcagaagaagaagagactgtggggtct 1109

                                     
Query: 421  tgttgtttgccaccatgagagcccc 445
              |||||||||||||||| ||||||
Sbjct: 1110 cattgtttgccaccatgaaagcccc 1134

---

>gb|AY466079.1| Sorghum arundinaceum voucher IS14485 phytochrome A (PHYA) gene,
            complete cds
          Length = 3834

 Score =  430 bits (217), Expect = e-117
 Identities = 388/445 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1    agtctttgaacttacagggtatgatagggttatggcttacaagttccatgaagataacca 60
            ||||||||| |||||||| ||||| |||||||||||||||||||||||||||||| | ||
Sbjct: 690  agtctttgagcttacaggttatgacagggttatggcttacaagttccatgaagatgagca 749

                                                                        
Query: 61   tggcgaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcacta 120
            ||| ||||||||||| |||||||| || |||||  |||| |||||||| |||||||||||
Sbjct: 750  tggggaggtctttgctgagatcaccaaacctggtattgaaccttatctaggcctgcacta 809

                                                                        
Query: 121  tccagccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggat 180
            |||||||||||||||||||||||| || |||||||| |||||||||||||||||  | ||
Sbjct: 810  tccagccactgatatccctcaagctgccaggtttctcttcatgaagaacaaagtcagaat 869

                                                                        
Query: 181  gatttgcgatgtccgcgcaagaaccctaaaggtcatcgaagatgaggcactcccctttga 240
            ||| || |||  ||| |||| | |  | ||| | || ||||||||||||||| || ||||
Sbjct: 870  gatctgtgattgccgtgcaaaatctgtgaagattattgaagatgaggcactctccattga 929

                                                                        
Query: 241  tattagcttgtgtggttcatcactcagggcagcacacagctgtcaccttcagtatatgga 300
            ||||||||||||||||||| | || || ||| |||| |||||||||||||||||||||||
Sbjct: 930  tattagcttgtgtggttcaactcttagagcaccacatagctgtcaccttcagtatatgga 989

                                                                        
Query: 301  gaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgagagtgaagagga 360
            |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 990  gaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgaaaatgaagagga 1049

                                                                        
Query: 361  cgacgaggccgagtccgaacaaccagcacagcagcagaagaagaagatactatggggcct 420
             || ||  | | | ||||||||||| |||| |||||||||||||||| ||| ||||| ||
Sbjct: 1050 tgatgaacctgggcccgaacaaccaccacaacagcagaagaagaagagactgtggggtct 1109

                                     
Query: 421  tgttgtttgccaccatgagagcccc 445
              |||||||||||||||| ||||||
Sbjct: 1110 cattgtttgccaccatgaaagcccc 1134

---

>gb|AY466078.1| Sorghum arundinaceum voucher PI302105 phytochrome A (PHYA) gene,
            complete cds
          Length = 3834

 Score =  430 bits (217), Expect = e-117
 Identities = 388/445 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1    agtctttgaacttacagggtatgatagggttatggcttacaagttccatgaagataacca 60
            ||||||||| |||||||| ||||| |||||||||||||||||||||||||||||| | ||
Sbjct: 690  agtctttgagcttacaggttatgacagggttatggcttacaagttccatgaagatgagca 749

                                                                        
Query: 61   tggcgaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcacta 120
            ||| ||||||||||| |||||||| || |||||  |||| |||||||| |||||||||||
Sbjct: 750  tggggaggtctttgctgagatcaccaaacctggtattgaaccttatctaggcctgcacta 809

                                                                        
Query: 121  tccagccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggat 180
            |||||||||||||||||||||||| || |||||||| |||||||||||||||||  | ||
Sbjct: 810  tccagccactgatatccctcaagctgccaggtttctcttcatgaagaacaaagtcagaat 869

                                                                        
Query: 181  gatttgcgatgtccgcgcaagaaccctaaaggtcatcgaagatgaggcactcccctttga 240
            ||| || |||  ||| |||| | |  | ||| | || ||||||||||||||| || ||||
Sbjct: 870  gatctgtgattgccgtgcaaaatctgtgaagattattgaagatgaggcactctccattga 929

                                                                        
Query: 241  tattagcttgtgtggttcatcactcagggcagcacacagctgtcaccttcagtatatgga 300
            ||||||||||||||||||| | || || ||| |||| |||||||||||||||||||||||
Sbjct: 930  tattagcttgtgtggttcaactcttagagcaccacatagctgtcaccttcagtatatgga 989

                                                                        
Query: 301  gaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgagagtgaagagga 360
            |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 990  gaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgaaaatgaagagga 1049

                                                                        
Query: 361  cgacgaggccgagtccgaacaaccagcacagcagcagaagaagaagatactatggggcct 420
             || ||  | | | ||||||||||| |||| |||||||||||||||| ||| ||||| ||
Sbjct: 1050 tgatgaacctgggcccgaacaaccaccacaacagcagaagaagaagagactgtggggtct 1109

                                     
Query: 421  tgttgtttgccaccatgagagcccc 445
              |||||||||||||||| ||||||
Sbjct: 1110 cattgtttgccaccatgaaagcccc 1134

---

>gb|AY466077.1| Sorghum arundinaceum voucher IS14567 phytochrome A (PHYA) gene,
            complete cds
          Length = 3834

 Score =  430 bits (217), Expect = e-117
 Identities = 388/445 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1    agtctttgaacttacagggtatgatagggttatggcttacaagttccatgaagataacca 60
            ||||||||| |||||||| ||||| |||||||||||||||||||||||||||||| | ||
Sbjct: 690  agtctttgagcttacaggttatgacagggttatggcttacaagttccatgaagatgagca 749

                                                                        
Query: 61   tggcgaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcacta 120
            ||| ||||||||||| |||||||| || |||||  |||| |||||||| |||||||||||
Sbjct: 750  tggggaggtctttgctgagatcaccaaacctggtattgaaccttatctaggcctgcacta 809

                                                                        
Query: 121  tccagccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggat 180
            |||||||||||||||||||||||| || |||||||| |||||||||||||||||  | ||
Sbjct: 810  tccagccactgatatccctcaagctgccaggtttctcttcatgaagaacaaagtcagaat 869

                                                                        
Query: 181  gatttgcgatgtccgcgcaagaaccctaaaggtcatcgaagatgaggcactcccctttga 240
            ||| || |||  ||| |||| | |  | ||| | || ||||||||||||||| || ||||
Sbjct: 870  gatctgtgattgccgtgcaaaatctgtgaagattattgaagatgaggcactctccattga 929

                                                                        
Query: 241  tattagcttgtgtggttcatcactcagggcagcacacagctgtcaccttcagtatatgga 300
            ||||||||||||||||||| | || || ||| |||| |||||||||||||||||||||||
Sbjct: 930  tattagcttgtgtggttcaactcttagagcaccacatagctgtcaccttcagtatatgga 989

                                                                        
Query: 301  gaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgagagtgaagagga 360
            |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 990  gaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgaaaatgaagagga 1049

                                                                        
Query: 361  cgacgaggccgagtccgaacaaccagcacagcagcagaagaagaagatactatggggcct 420
             || ||  | | | ||||||||||| |||| |||||||||||||||| ||| ||||| ||
Sbjct: 1050 tgatgaacctgggcccgaacaaccaccacaacagcagaagaagaagagactgtggggtct 1109

                                     
Query: 421  tgttgtttgccaccatgagagcccc 445
              |||||||||||||||| ||||||
Sbjct: 1110 cattgtttgccaccatgaaagcccc 1134

---

>gb|AY466076.1| Sorghum arundinaceum voucher IS14503 phytochrome A (PHYA) gene,
            complete cds
          Length = 3834

 Score =  430 bits (217), Expect = e-117
 Identities = 388/445 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1    agtctttgaacttacagggtatgatagggttatggcttacaagttccatgaagataacca 60
            ||||||||| |||||||| ||||| |||||||||||||||||||||||||||||| | ||
Sbjct: 690  agtctttgagcttacaggttatgacagggttatggcttacaagttccatgaagatgagca 749

                                                                        
Query: 61   tggcgaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcacta 120
            ||| ||||||||||| |||||||| || |||||  |||| |||||||| |||||||||||
Sbjct: 750  tggggaggtctttgctgagatcaccaaacctggtattgaaccttatctaggcctgcacta 809

                                                                        
Query: 121  tccagccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggat 180
            |||||||||||||||||||||||| || |||||||| |||||||||||||||||  | ||
Sbjct: 810  tccagccactgatatccctcaagctgccaggtttctcttcatgaagaacaaagtcagaat 869

                                                                        
Query: 181  gatttgcgatgtccgcgcaagaaccctaaaggtcatcgaagatgaggcactcccctttga 240
            ||| || |||  ||| |||| | |  | ||| | || ||||||||||||||| || ||||
Sbjct: 870  gatctgtgattgccgtgcaaaatctgtgaagattattgaagatgaggcactctccattga 929

                                                                        
Query: 241  tattagcttgtgtggttcatcactcagggcagcacacagctgtcaccttcagtatatgga 300
            ||||||||||||||||||| | || || ||| |||| |||||||||||||||||||||||
Sbjct: 930  tattagcttgtgtggttcaactcttagagcaccacatagctgtcaccttcagtatatgga 989

                                                                        
Query: 301  gaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgagagtgaagagga 360
            |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 990  gaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgaaaatgaagagga 1049

                                                                        
Query: 361  cgacgaggccgagtccgaacaaccagcacagcagcagaagaagaagatactatggggcct 420
             || ||  | | | ||||||||||| |||| |||||||||||||||| ||| ||||| ||
Sbjct: 1050 tgatgaacctgggcccgaacaaccaccacaacagcagaagaagaagagactgtggggtct 1109

                                     
Query: 421  tgttgtttgccaccatgagagcccc 445
              |||||||||||||||| ||||||
Sbjct: 1110 cattgtttgccaccatgaaagcccc 1134

---

>gb|AY466075.1| Sorghum arundinaceum voucher PI213900 phytochrome A (PHYA) gene,
            complete cds
          Length = 3834

 Score =  430 bits (217), Expect = e-117
 Identities = 388/445 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1    agtctttgaacttacagggtatgatagggttatggcttacaagttccatgaagataacca 60
            ||||||||| |||||||| ||||| |||||||||||||||||||||||||||||| | ||
Sbjct: 690  agtctttgagcttacaggttatgacagggttatggcttacaagttccatgaagatgagca 749

                                                                        
Query: 61   tggcgaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcacta 120
            ||| ||||||||||| |||||||| || |||||  |||| |||||||| |||||||||||
Sbjct: 750  tggggaggtctttgctgagatcaccaaacctggtattgaaccttatctaggcctgcacta 809

                                                                        
Query: 121  tccagccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggat 180
            |||||||||||||||||||||||| || |||||||| |||||||||||||||||  | ||
Sbjct: 810  tccagccactgatatccctcaagctgccaggtttctcttcatgaagaacaaagtcagaat 869

                                                                        
Query: 181  gatttgcgatgtccgcgcaagaaccctaaaggtcatcgaagatgaggcactcccctttga 240
            ||| || |||  ||| |||| | |  | ||| | || ||||||||||||||| || ||||
Sbjct: 870  gatctgtgattgccgtgcaaaatctgtgaagattattgaagatgaggcactctccattga 929

                                                                        
Query: 241  tattagcttgtgtggttcatcactcagggcagcacacagctgtcaccttcagtatatgga 300
            ||||||||||||||||||| | || || ||| |||| |||||||||||||||||||||||
Sbjct: 930  tattagcttgtgtggttcaactcttagagcaccacatagctgtcaccttcagtatatgga 989

                                                                        
Query: 301  gaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgagagtgaagagga 360
            |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 990  gaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgaaaatgaagagga 1049

                                                                        
Query: 361  cgacgaggccgagtccgaacaaccagcacagcagcagaagaagaagatactatggggcct 420
             || ||  | | | ||||||||||| |||| |||||||||||||||| ||| ||||| ||
Sbjct: 1050 tgatgaacctgggcccgaacaaccaccacaacagcagaagaagaagagactgtggggtct 1109

                                     
Query: 421  tgttgtttgccaccatgagagcccc 445
              |||||||||||||||| ||||||
Sbjct: 1110 cattgtttgccaccatgaaagcccc 1134

---

>gb|AY466074.1| Sorghum arundinaceum voucher IS14569 phytochrome A (PHYA) gene,
            complete cds
          Length = 3834

 Score =  430 bits (217), Expect = e-117
 Identities = 388/445 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1    agtctttgaacttacagggtatgatagggttatggcttacaagttccatgaagataacca 60
            ||||||||| |||||||| ||||| |||||||||||||||||||||||||||||| | ||
Sbjct: 690  agtctttgagcttacaggttatgacagggttatggcttacaagttccatgaagatgagca 749

                                                                        
Query: 61   tggcgaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcacta 120
            ||| ||||||||||| |||||||| || |||||  |||| |||||||| |||||||||||
Sbjct: 750  tggggaggtctttgctgagatcaccaaacctggtattgaaccttatctaggcctgcacta 809

                                                                        
Query: 121  tccagccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggat 180
            |||||||||||||||||||||||| || |||||||| |||||||||||||||||  | ||
Sbjct: 810  tccagccactgatatccctcaagctgccaggtttctcttcatgaagaacaaagtcagaat 869

                                                                        
Query: 181  gatttgcgatgtccgcgcaagaaccctaaaggtcatcgaagatgaggcactcccctttga 240
            ||| || |||  ||| |||| | |  | ||| | || ||||||||||||||| || ||||
Sbjct: 870  gatctgtgattgccgtgcaaaatctgtgaagattattgaagatgaggcactctccattga 929

                                                                        
Query: 241  tattagcttgtgtggttcatcactcagggcagcacacagctgtcaccttcagtatatgga 300
            ||||||||||||||||||| | || || ||| |||| |||||||||||||||||||||||
Sbjct: 930  tattagcttgtgtggttcaactcttagagcaccacatagctgtcaccttcagtatatgga 989

                                                                        
Query: 301  gaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgagagtgaagagga 360
            |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 990  gaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgaaaatgaagagga 1049

                                                                        
Query: 361  cgacgaggccgagtccgaacaaccagcacagcagcagaagaagaagatactatggggcct 420
             || ||  | | | ||||||||||| |||| |||||||||||||||| ||| ||||| ||
Sbjct: 1050 tgatgaacctgggcccgaacaaccaccacaacagcagaagaagaagagactgtggggtct 1109

                                     
Query: 421  tgttgtttgccaccatgagagcccc 445
              |||||||||||||||| ||||||
Sbjct: 1110 cattgtttgccaccatgaaagcccc 1134

---

>gb|AY466073.1| Sorghum bicolor phytochrome A (PHYA) gene, complete cds
          Length = 3834

 Score =  430 bits (217), Expect = e-117
 Identities = 388/445 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1    agtctttgaacttacagggtatgatagggttatggcttacaagttccatgaagataacca 60
            ||||||||| |||||||| ||||| |||||||||||||||||||||||||||||| | ||
Sbjct: 690  agtctttgagcttacaggttatgacagggttatggcttacaagttccatgaagatgagca 749

                                                                        
Query: 61   tggcgaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcacta 120
            ||| ||||||||||| |||||||| || |||||  |||| |||||||| |||||||||||
Sbjct: 750  tggggaggtctttgctgagatcaccaaacctggtattgaaccttatctaggcctgcacta 809

                                                                        
Query: 121  tccagccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggat 180
            |||||||||||||||||||||||| || |||||||| |||||||||||||||||  | ||
Sbjct: 810  tccagccactgatatccctcaagctgccaggtttctcttcatgaagaacaaagtcagaat 869

                                                                        
Query: 181  gatttgcgatgtccgcgcaagaaccctaaaggtcatcgaagatgaggcactcccctttga 240
            ||| || |||  ||| |||| | |  | ||| | || ||||||||||||||| || ||||
Sbjct: 870  gatctgtgattgccgtgcaaaatctgtgaagattattgaagatgaggcactctccattga 929

                                                                        
Query: 241  tattagcttgtgtggttcatcactcagggcagcacacagctgtcaccttcagtatatgga 300
            ||||||||||||||||||| | || || ||| |||| |||||||||||||||||||||||
Sbjct: 930  tattagcttgtgtggttcaactcttagagcaccacatagctgtcaccttcagtatatgga 989

                                                                        
Query: 301  gaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgagagtgaagagga 360
            |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 990  gaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgaaaatgaagagga 1049

                                                                        
Query: 361  cgacgaggccgagtccgaacaaccagcacagcagcagaagaagaagatactatggggcct 420
             || ||  | | | ||||||||||| |||| |||||||||||||||| ||| ||||| ||
Sbjct: 1050 tgatgaacctgggcccgaacaaccaccacaacagcagaagaagaagagactgtggggtct 1109

                                     
Query: 421  tgttgtttgccaccatgagagcccc 445
              |||||||||||||||| ||||||
Sbjct: 1110 cattgtttgccaccatgaaagcccc 1134

---

>gb|AY466072.1| Sorghum bicolor isolate PHYA-RTx430 phytochrome A (PHYA) gene,
            complete cds
          Length = 3834

 Score =  430 bits (217), Expect = e-117
 Identities = 388/445 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1    agtctttgaacttacagggtatgatagggttatggcttacaagttccatgaagataacca 60
            ||||||||| |||||||| ||||| |||||||||||||||||||||||||||||| | ||
Sbjct: 690  agtctttgagcttacaggttatgacagggttatggcttacaagttccatgaagatgagca 749

                                                                        
Query: 61   tggcgaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcacta 120
            ||| ||||||||||| |||||||| || |||||  |||| |||||||| |||||||||||
Sbjct: 750  tggggaggtctttgctgagatcaccaaacctggtattgaaccttatctaggcctgcacta 809

                                                                        
Query: 121  tccagccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggat 180
            |||||||||||||||||||||||| || |||||||| |||||||||||||||||  | ||
Sbjct: 810  tccagccactgatatccctcaagctgccaggtttctcttcatgaagaacaaagtcagaat 869

                                                                        
Query: 181  gatttgcgatgtccgcgcaagaaccctaaaggtcatcgaagatgaggcactcccctttga 240
            ||| || |||  ||| |||| | |  | ||| | || ||||||||||||||| || ||||
Sbjct: 870  gatctgtgattgccgtgcaaaatctgtgaagattattgaagatgaggcactctccattga 929

                                                                        
Query: 241  tattagcttgtgtggttcatcactcagggcagcacacagctgtcaccttcagtatatgga 300
            ||||||||||||||||||| | || || ||| |||| |||||||||||||||||||||||
Sbjct: 930  tattagcttgtgtggttcaactcttagagcaccacatagctgtcaccttcagtatatgga 989

                                                                        
Query: 301  gaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgagagtgaagagga 360
            |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 990  gaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgaaaatgaagagga 1049

                                                                        
Query: 361  cgacgaggccgagtccgaacaaccagcacagcagcagaagaagaagatactatggggcct 420
             || ||  | | | ||||||||||| |||| |||||||||||||||| ||| ||||| ||
Sbjct: 1050 tgatgaacctgggcccgaacaaccaccacaacagcagaagaagaagagactgtggggtct 1109

                                     
Query: 421  tgttgtttgccaccatgagagcccc 445
              |||||||||||||||| ||||||
Sbjct: 1110 cattgtttgccaccatgaaagcccc 1134

---

>gb|AY466071.1| Sorghum bicolor voucher NSL83707 phytochrome A (PHYA) gene, complete
            cds
          Length = 3834

 Score =  430 bits (217), Expect = e-117
 Identities = 388/445 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1    agtctttgaacttacagggtatgatagggttatggcttacaagttccatgaagataacca 60
            ||||||||| |||||||| ||||| |||||||||||||||||||||||||||||| | ||
Sbjct: 690  agtctttgagcttacaggttatgacagggttatggcttacaagttccatgaagatgagca 749

                                                                        
Query: 61   tggcgaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcacta 120
            ||| ||||||||||| |||||||| || |||||  |||| |||||||| |||||||||||
Sbjct: 750  tggggaggtctttgctgagatcaccaaacctggtattgaaccttatctaggcctgcacta 809

                                                                        
Query: 121  tccagccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggat 180
            |||||||||||||||||||||||| || |||||||| |||||||||||||||||  | ||
Sbjct: 810  tccagccactgatatccctcaagctgccaggtttctcttcatgaagaacaaagtcagaat 869

                                                                        
Query: 181  gatttgcgatgtccgcgcaagaaccctaaaggtcatcgaagatgaggcactcccctttga 240
            ||| || |||  ||| |||| | |  | ||| | || ||||||||||||||| || ||||
Sbjct: 870  gatctgtgattgccgtgcaaaatctgtgaagattattgaagatgaggcactctccattga 929

                                                                        
Query: 241  tattagcttgtgtggttcatcactcagggcagcacacagctgtcaccttcagtatatgga 300
            ||||||||||||||||||| | || || ||| |||| |||||||||||||||||||||||
Sbjct: 930  tattagcttgtgtggttcaactcttagagcaccacatagctgtcaccttcagtatatgga 989

                                                                        
Query: 301  gaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgagagtgaagagga 360
            |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 990  gaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgaaaatgaagagga 1049

                                                                        
Query: 361  cgacgaggccgagtccgaacaaccagcacagcagcagaagaagaagatactatggggcct 420
             || ||  | | | ||||||||||| |||| |||||||||||||||| ||| ||||| ||
Sbjct: 1050 tgatgaacctgggcccgaacaaccaccacaacagcagaagaagaagagactgtggggtct 1109

                                     
Query: 421  tgttgtttgccaccatgagagcccc 445
              |||||||||||||||| ||||||
Sbjct: 1110 cattgtttgccaccatgaaagcccc 1134

---

>gb|AY466070.1| Sorghum bicolor voucher PI152593 phytochrome A (PHYA) gene, complete
            cds
          Length = 3834

 Score =  430 bits (217), Expect = e-117
 Identities = 388/445 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1    agtctttgaacttacagggtatgatagggttatggcttacaagttccatgaagataacca 60
            ||||||||| |||||||| ||||| |||||||||||||||||||||||||||||| | ||
Sbjct: 690  agtctttgagcttacaggttatgacagggttatggcttacaagttccatgaagatgagca 749

                                                                        
Query: 61   tggcgaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcacta 120
            ||| ||||||||||| |||||||| || |||||  |||| |||||||| |||||||||||
Sbjct: 750  tggggaggtctttgctgagatcaccaaacctggtattgaaccttatctaggcctgcacta 809

                                                                        
Query: 121  tccagccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggat 180
            |||||||||||||||||||||||| || |||||||| |||||||||||||||||  | ||
Sbjct: 810  tccagccactgatatccctcaagctgccaggtttctcttcatgaagaacaaagtcagaat 869

                                                                        
Query: 181  gatttgcgatgtccgcgcaagaaccctaaaggtcatcgaagatgaggcactcccctttga 240
            ||| || |||  ||| |||| | |  | ||| | || ||||||||||||||| || ||||
Sbjct: 870  gatctgtgattgccgtgcaaaatctgtgaagattattgaagatgaggcactctccattga 929

                                                                        
Query: 241  tattagcttgtgtggttcatcactcagggcagcacacagctgtcaccttcagtatatgga 300
            ||||||||||||||||||| | || || ||| |||| |||||||||||||||||||||||
Sbjct: 930  tattagcttgtgtggttcaactcttagagcaccacatagctgtcaccttcagtatatgga 989

                                                                        
Query: 301  gaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgagagtgaagagga 360
            |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 990  gaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgaaaatgaagagga 1049

                                                                        
Query: 361  cgacgaggccgagtccgaacaaccagcacagcagcagaagaagaagatactatggggcct 420
             || ||  | | | ||||||||||| |||| |||||||||||||||| ||| ||||| ||
Sbjct: 1050 tgatgaacctgggcccgaacaaccaccacaacagcagaagaagaagagactgtggggtct 1109

                                     
Query: 421  tgttgtttgccaccatgagagcccc 445
              |||||||||||||||| ||||||
Sbjct: 1110 cattgtttgccaccatgaaagcccc 1134

---

>gb|AY466069.1| Sorghum bicolor voucher PI229835 phytochrome A (PHYA) gene, complete
            cds
          Length = 3834

 Score =  430 bits (217), Expect = e-117
 Identities = 388/445 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1    agtctttgaacttacagggtatgatagggttatggcttacaagttccatgaagataacca 60
            ||||||||| |||||||| ||||| |||||||||||||||||||||||||||||| | ||
Sbjct: 690  agtctttgagcttacaggttatgacagggttatggcttacaagttccatgaagatgagca 749

                                                                        
Query: 61   tggcgaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcacta 120
            ||| ||||||||||| |||||||| || |||||  |||| |||||||| |||||||||||
Sbjct: 750  tggggaggtctttgctgagatcaccaaacctggtattgaaccttatctaggcctgcacta 809

                                                                        
Query: 121  tccagccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggat 180
            |||||||||||||||||||||||| || |||||||| |||||||||||||||||  | ||
Sbjct: 810  tccagccactgatatccctcaagctgccaggtttctcttcatgaagaacaaagtcagaat 869

                                                                        
Query: 181  gatttgcgatgtccgcgcaagaaccctaaaggtcatcgaagatgaggcactcccctttga 240
            ||| || |||  ||| |||| | |  | ||| | || ||||||||||||||| || ||||
Sbjct: 870  gatctgtgattgccgtgcaaaatctgtgaagattattgaagatgaggcactctccattga 929

                                                                        
Query: 241  tattagcttgtgtggttcatcactcagggcagcacacagctgtcaccttcagtatatgga 300
            ||||||||||||||||||| | || || ||| |||| |||||||||||||||||||||||
Sbjct: 930  tattagcttgtgtggttcaactcttagagcaccacatagctgtcaccttcagtatatgga 989

                                                                        
Query: 301  gaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgagagtgaagagga 360
            |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 990  gaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgaaaatgaagagga 1049

                                                                        
Query: 361  cgacgaggccgagtccgaacaaccagcacagcagcagaagaagaagatactatggggcct 420
             || ||  | | | ||||||||||| |||| |||||||||||||||| ||| ||||| ||
Sbjct: 1050 tgatgaacctgggcccgaacaaccaccacaacagcagaagaagaagagactgtggggtct 1109

                                     
Query: 421  tgttgtttgccaccatgagagcccc 445
              |||||||||||||||| ||||||
Sbjct: 1110 cattgtttgccaccatgaaagcccc 1134

---

>gb|AY466068.1| Sorghum bicolor voucher PI153800 phytochrome A (PHYA) gene, complete
            cds
          Length = 3834

 Score =  430 bits (217), Expect = e-117
 Identities = 388/445 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1    agtctttgaacttacagggtatgatagggttatggcttacaagttccatgaagataacca 60
            ||||||||| |||||||| ||||| |||||||||||||||||||||||||||||| | ||
Sbjct: 690  agtctttgagcttacaggttatgacagggttatggcttacaagttccatgaagatgagca 749

                                                                        
Query: 61   tggcgaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcacta 120
            ||| ||||||||||| |||||||| || |||||  |||| |||||||| |||||||||||
Sbjct: 750  tggggaggtctttgctgagatcaccaaacctggtattgaaccttatctaggcctgcacta 809

                                                                        
Query: 121  tccagccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggat 180
            |||||||||||||||||||||||| || |||||||| |||||||||||||||||  | ||
Sbjct: 810  tccagccactgatatccctcaagctgccaggtttctcttcatgaagaacaaagtcagaat 869

                                                                        
Query: 181  gatttgcgatgtccgcgcaagaaccctaaaggtcatcgaagatgaggcactcccctttga 240
            ||| || |||  ||| |||| | |  | ||| | || ||||||||||||||| || ||||
Sbjct: 870  gatctgtgattgccgtgcaaaatctgtgaagattattgaagatgaggcactctccattga 929

                                                                        
Query: 241  tattagcttgtgtggttcatcactcagggcagcacacagctgtcaccttcagtatatgga 300
            ||||||||||||||||||| | || || ||| |||| |||||||||||||||||||||||
Sbjct: 930  tattagcttgtgtggttcaactcttagagcaccacatagctgtcaccttcagtatatgga 989

                                                                        
Query: 301  gaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgagagtgaagagga 360
            |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 990  gaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgaaaatgaagagga 1049

                                                                        
Query: 361  cgacgaggccgagtccgaacaaccagcacagcagcagaagaagaagatactatggggcct 420
             || ||  | | | ||||||||||| |||| |||||||||||||||| ||| ||||| ||
Sbjct: 1050 tgatgaacctgggcccgaacaaccaccacaacagcagaagaagaagagactgtggggtct 1109

                                     
Query: 421  tgttgtttgccaccatgagagcccc 445
              |||||||||||||||| ||||||
Sbjct: 1110 cattgtttgccaccatgaaagcccc 1134

---

>gb|AY466067.1| Sorghum bicolor voucher PI267380 phytochrome A (PHYA) gene, complete
            cds
          Length = 3834

 Score =  430 bits (217), Expect = e-117
 Identities = 388/445 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1    agtctttgaacttacagggtatgatagggttatggcttacaagttccatgaagataacca 60
            ||||||||| |||||||| ||||| |||||||||||||||||||||||||||||| | ||
Sbjct: 690  agtctttgagcttacaggttatgacagggttatggcttacaagttccatgaagatgagca 749

                                                                        
Query: 61   tggcgaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcacta 120
            ||| ||||||||||| |||||||| || |||||  |||| |||||||| |||||||||||
Sbjct: 750  tggggaggtctttgctgagatcaccaaacctggtattgaaccttatctaggcctgcacta 809

                                                                        
Query: 121  tccagccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggat 180
            |||||||||||||||||||||||| || |||||||| |||||||||||||||||  | ||
Sbjct: 810  tccagccactgatatccctcaagctgccaggtttctcttcatgaagaacaaagtcagaat 869

                                                                        
Query: 181  gatttgcgatgtccgcgcaagaaccctaaaggtcatcgaagatgaggcactcccctttga 240
            ||| || |||  ||| |||| | |  | ||| | || ||||||||||||||| || ||||
Sbjct: 870  gatctgtgattgccgtgcaaaatctgtgaagattattgaagatgaggcactctccattga 929

                                                                        
Query: 241  tattagcttgtgtggttcatcactcagggcagcacacagctgtcaccttcagtatatgga 300
            ||||||||||||||||||| | || || ||| |||| |||||||||||||||||||||||
Sbjct: 930  tattagcttgtgtggttcaactcttagagcaccacatagctgtcaccttcagtatatgga 989

                                                                        
Query: 301  gaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgagagtgaagagga 360
            |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 990  gaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgaaaatgaagagga 1049

                                                                        
Query: 361  cgacgaggccgagtccgaacaaccagcacagcagcagaagaagaagatactatggggcct 420
             || ||  | | | ||||||||||| |||| |||||||||||||||| ||| ||||| ||
Sbjct: 1050 tgatgaacctgggcccgaacaaccaccacaacagcagaagaagaagagactgtggggtct 1109

                                     
Query: 421  tgttgtttgccaccatgagagcccc 445
              |||||||||||||||| ||||||
Sbjct: 1110 cattgtttgccaccatgaaagcccc 1134

---

>gb|AF369906.1| Sorghum bicolor clone BAC10J22 Sbb3766 sequence
          Length = 152439

 Score =  430 bits (217), Expect = e-117
 Identities = 388/445 (87%)
 Strand = Plus / Minus

                                                                          
Query: 1      agtctttgaacttacagggtatgatagggttatggcttacaagttccatgaagataacca 60
              ||||||||| |||||||| ||||| |||||||||||||||||||||||||||||| | ||
Sbjct: 137221 agtctttgagcttacaggttatgacagggttatggcttacaagttccatgaagatgagca 137162

                                                                          
Query: 61     tggcgaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcacta 120
              ||| ||||||||||| |||||||| || |||||  |||| |||||||| |||||||||||
Sbjct: 137161 tggggaggtctttgctgagatcaccaaacctggtattgaaccttatctaggcctgcacta 137102

                                                                          
Query: 121    tccagccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggat 180
              |||||||||||||||||||||||| || |||||||| |||||||||||||||||  | ||
Sbjct: 137101 tccagccactgatatccctcaagctgccaggtttctcttcatgaagaacaaagtcagaat 137042

                                                                          
Query: 181    gatttgcgatgtccgcgcaagaaccctaaaggtcatcgaagatgaggcactcccctttga 240
              ||| || |||  ||| |||| | |  | ||| | || ||||||||||||||| || ||||
Sbjct: 137041 gatctgtgattgccgtgcaaaatctgtgaagattattgaagatgaggcactctccattga 136982

                                                                          
Query: 241    tattagcttgtgtggttcatcactcagggcagcacacagctgtcaccttcagtatatgga 300
              ||||||||||||||||||| | || || ||| |||| |||||||||||||||||||||||
Sbjct: 136981 tattagcttgtgtggttcaactcttagagcaccacatagctgtcaccttcagtatatgga 136922

                                                                          
Query: 301    gaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgagagtgaagagga 360
              |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 136921 gaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgaaaatgaagagga 136862

                                                                          
Query: 361    cgacgaggccgagtccgaacaaccagcacagcagcagaagaagaagatactatggggcct 420
               || ||  | | | ||||||||||| |||| |||||||||||||||| ||| ||||| ||
Sbjct: 136861 tgatgaacctgggcccgaacaaccaccacaacagcagaagaagaagagactgtggggtct 136802

                                       
Query: 421    tgttgtttgccaccatgagagcccc 445
                |||||||||||||||| ||||||
Sbjct: 136801 cattgtttgccaccatgaaagcccc 136777

---

>gb|U56729.1|SBU56729 Sorghum bicolor phytochrome A (PHYA) mRNA, complete cds
          Length = 3805

 Score =  430 bits (217), Expect = e-117
 Identities = 388/445 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1    agtctttgaacttacagggtatgatagggttatggcttacaagttccatgaagataacca 60
            ||||||||| |||||||| ||||| |||||||||||||||||||||||||||||| | ||
Sbjct: 927  agtctttgagcttacaggttatgacagggttatggcttacaagttccatgaagatgagca 986

                                                                        
Query: 61   tggcgaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcacta 120
            ||| ||||||||||| |||||||| || |||||  |||| |||||||| |||||||||||
Sbjct: 987  tggggaggtctttgctgagatcaccaaacctggtattgaaccttatctaggcctgcacta 1046

                                                                        
Query: 121  tccagccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggat 180
            |||||||||||||||||||||||| || |||||||| |||||||||||||||||  | ||
Sbjct: 1047 tccagccactgatatccctcaagctgccaggtttctcttcatgaagaacaaagtcagaat 1106

                                                                        
Query: 181  gatttgcgatgtccgcgcaagaaccctaaaggtcatcgaagatgaggcactcccctttga 240
            ||| || |||  ||| |||| | |  | ||| | || ||||||||||||||| || ||||
Sbjct: 1107 gatctgtgattgccgtgcaaaatctgtgaagattattgaagatgaggcactctccattga 1166

                                                                        
Query: 241  tattagcttgtgtggttcatcactcagggcagcacacagctgtcaccttcagtatatgga 300
            ||||||||||||||||||| | || || ||| |||| |||||||||||||||||||||||
Sbjct: 1167 tattagcttgtgtggttcaactcttagagcaccacatagctgtcaccttcagtatatgga 1226

                                                                        
Query: 301  gaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgagagtgaagagga 360
            |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 1227 gaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgaaaatgaagagga 1286

                                                                        
Query: 361  cgacgaggccgagtccgaacaaccagcacagcagcagaagaagaagatactatggggcct 420
             || ||  | | | ||||||||||| |||| |||||||||||||||| ||| ||||| ||
Sbjct: 1287 tgatgaacctgggcccgaacaaccaccacaacagcagaagaagaagagactgtggggtct 1346

                                     
Query: 421  tgttgtttgccaccatgagagcccc 445
              |||||||||||||||| ||||||
Sbjct: 1347 cattgtttgccaccatgaaagcccc 1371

---

>gb|AF377946.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone
              OSJNBa0031O09, complete sequence
          Length = 161339

 Score =  426 bits (215), Expect = e-116
 Identities = 386/443 (87%)
 Strand = Plus / Minus

                                                                          
Query: 3      tctttgaacttacagggtatgatagggttatggcttacaagttccatgaagataaccatg 62
              ||||||| || ||||| |||||||| ||||||||||| ||||||||||||||| ||||||
Sbjct: 144223 tctttgacctcacaggatatgatagagttatggcttataagttccatgaagatgaccatg 144164

                                                                          
Query: 63     gcgaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcactatc 122
              | || |||||||| ||||||||||||||||| ||||| |||||||| |||||||| ||||
Sbjct: 144163 gtgaagtctttgctgagatcacaaagcctggtcttgaaccttatcttggcctgcattatc 144104

                                                                          
Query: 123    cagccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggatga 182
              |||| |||||||||||||| ||||| |||||||| ||||||||||||||||| |||||||
Sbjct: 144103 cagctactgatatccctcaggcagccaggtttcttttcatgaagaacaaagtccggatga 144044

                                                                          
Query: 183    tttgcgatgtccgcgcaagaaccctaaaggtcatcgaagatgaggcactcccctttgata 242
              |||| |||  ||| |||||| |  | ||| | |||||||||||| | |||| ||| ||||
Sbjct: 144043 tttgtgattgccgtgcaagatctatcaagattatcgaagatgagtcgctccacttggata 143984

                                                                          
Query: 243    ttagcttgtgtggttcatcactcagggcagcacacagctgtcaccttcagtatatggaga 302
              ||||||| ||||||||| |||| |||||| ||||||| ||||| ||||||||||||||||
Sbjct: 143983 ttagcttatgtggttcaacactgagggcaccacacagttgtcatcttcagtatatggaga 143924

                                                                          
Query: 303    acatgaactcgattgcatcccttgtcatggctgttgtggttaatgagagtgaagaggacg 362
              |||||||||||||||||||||||||||||||||||||||||||||||| ||| || || |
Sbjct: 143923 acatgaactcgattgcatcccttgtcatggctgttgtggttaatgagaatgaggatgatg 143864

                                                                          
Query: 363    acgaggccgagtccgaacaaccagcacagcagcagaagaagaagatactatggggccttg 422
              | || |  | | | || ||||| ||||| |||||||||| ||||| ||||||||| ||  
Sbjct: 143863 atgaagttggggctgatcaacctgcacaacagcagaagaggaagaaactatggggactcc 143804

                                     
Query: 423    ttgtttgccaccatgagagcccc 445
              |||||||||||||||||||||||
Sbjct: 143803 ttgtttgccaccatgagagcccc 143781

---

>gb|AC147426.2| Oryza sativa chromosome 3  B1377B10 genomic sequence, complete sequence
          Length = 184366

 Score =  426 bits (215), Expect = e-116
 Identities = 386/443 (87%)
 Strand = Plus / Minus

                                                                         
Query: 3     tctttgaacttacagggtatgatagggttatggcttacaagttccatgaagataaccatg 62
             ||||||| || ||||| |||||||| ||||||||||| ||||||||||||||| ||||||
Sbjct: 62206 tctttgacctcacaggatatgatagagttatggcttataagttccatgaagatgaccatg 62147

                                                                         
Query: 63    gcgaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcactatc 122
             | || |||||||| ||||||||||||||||| ||||| |||||||| |||||||| ||||
Sbjct: 62146 gtgaagtctttgctgagatcacaaagcctggtcttgaaccttatcttggcctgcattatc 62087

                                                                         
Query: 123   cagccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggatga 182
             |||| |||||||||||||| ||||| |||||||| ||||||||||||||||| |||||||
Sbjct: 62086 cagctactgatatccctcaggcagccaggtttcttttcatgaagaacaaagtccggatga 62027

                                                                         
Query: 183   tttgcgatgtccgcgcaagaaccctaaaggtcatcgaagatgaggcactcccctttgata 242
             |||| |||  ||| |||||| |  | ||| | |||||||||||| | |||| ||| ||||
Sbjct: 62026 tttgtgattgccgtgcaagatctatcaagattatcgaagatgagtcgctccacttggata 61967

                                                                         
Query: 243   ttagcttgtgtggttcatcactcagggcagcacacagctgtcaccttcagtatatggaga 302
             ||||||| ||||||||| |||| |||||| ||||||| ||||| ||||||||||||||||
Sbjct: 61966 ttagcttatgtggttcaacactgagggcaccacacagttgtcatcttcagtatatggaga 61907

                                                                         
Query: 303   acatgaactcgattgcatcccttgtcatggctgttgtggttaatgagagtgaagaggacg 362
             |||||||||||||||||||||||||||||||||||||||||||||||| ||| || || |
Sbjct: 61906 acatgaactcgattgcatcccttgtcatggctgttgtggttaatgagaatgaggatgatg 61847

                                                                         
Query: 363   acgaggccgagtccgaacaaccagcacagcagcagaagaagaagatactatggggccttg 422
             | || |  | | | || ||||| ||||| |||||||||| ||||| ||||||||| ||  
Sbjct: 61846 atgaagttggggctgatcaacctgcacaacagcagaagaggaagaaactatggggactcc 61787

                                    
Query: 423   ttgtttgccaccatgagagcccc 445
             |||||||||||||||||||||||
Sbjct: 61786 ttgtttgccaccatgagagcccc 61764

---

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  426 bits (215), Expect = e-116
 Identities = 386/443 (87%)
 Strand = Plus / Minus

                                                                            
Query: 3        tctttgaacttacagggtatgatagggttatggcttacaagttccatgaagataaccatg 62
                ||||||| || ||||| |||||||| ||||||||||| ||||||||||||||| ||||||
Sbjct: 28878911 tctttgacctcacaggatatgatagagttatggcttataagttccatgaagatgaccatg 28878852

                                                                            
Query: 63       gcgaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcactatc 122
                | || |||||||| ||||||||||||||||| ||||| |||||||| |||||||| ||||
Sbjct: 28878851 gtgaagtctttgctgagatcacaaagcctggtcttgaaccttatcttggcctgcattatc 28878792

                                                                            
Query: 123      cagccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggatga 182
                |||| |||||||||||||| ||||| |||||||| ||||||||||||||||| |||||||
Sbjct: 28878791 cagctactgatatccctcaggcagccaggtttcttttcatgaagaacaaagtccggatga 28878732

                                                                            
Query: 183      tttgcgatgtccgcgcaagaaccctaaaggtcatcgaagatgaggcactcccctttgata 242
                |||| |||  ||| |||||| |  | ||| | |||||||||||| | |||| ||| ||||
Sbjct: 28878731 tttgtgattgccgtgcaagatctatcaagattatcgaagatgagtcgctccacttggata 28878672

                                                                            
Query: 243      ttagcttgtgtggttcatcactcagggcagcacacagctgtcaccttcagtatatggaga 302
                ||||||| ||||||||| |||| |||||| ||||||| ||||| ||||||||||||||||
Sbjct: 28878671 ttagcttatgtggttcaacactgagggcaccacacagttgtcatcttcagtatatggaga 28878612

                                                                            
Query: 303      acatgaactcgattgcatcccttgtcatggctgttgtggttaatgagagtgaagaggacg 362
                |||||||||||||||||||||||||||||||||||||||||||||||| ||| || || |
Sbjct: 28878611 acatgaactcgattgcatcccttgtcatggctgttgtggttaatgagaatgaggatgatg 28878552

                                                                            
Query: 363      acgaggccgagtccgaacaaccagcacagcagcagaagaagaagatactatggggccttg 422
                | || |  | | | || ||||| ||||| |||||||||| ||||| ||||||||| ||  
Sbjct: 28878551 atgaagttggggctgatcaacctgcacaacagcagaagaggaagaaactatggggactcc 28878492

                                       
Query: 423      ttgtttgccaccatgagagcccc 445
                |||||||||||||||||||||||
Sbjct: 28878491 ttgtttgccaccatgagagcccc 28878469



 Score =  105 bits (53), Expect = 1e-19
 Identities = 83/93 (89%)
 Strand = Plus / Plus

                                                                            
Query: 98       gagccttatctcggcctgcactatccagccactgatatccctcaagcagctaggtttctg 157
                ||||| ||||| ||||||||||| ||||||||||| || ||||| ||| | |||||| ||
Sbjct: 30713339 gagccgtatcttggcctgcactacccagccactgacattcctcaggcatccaggtttttg 30713398

                                                 
Query: 158      ttcatgaagaacaaagtgcggatgatttgcgat 190
                |||||||||||||||||||||||||| ||||||
Sbjct: 30713399 ttcatgaagaacaaagtgcggatgatatgcgat 30713431



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                                  
Query: 20       tatgatagggttatggcttacaagttccatgaagataaccatggcgaggt 69
                ||||| ||||| ||||| |||||||||||||| ||| | ||||| |||||
Sbjct: 30713261 tatgacagggtgatggcgtacaagttccatgaggatgagcatggtgaggt 30713310

---

>dbj|AB109891.1| Oryza sativa (japonica cultivar-group) PHYA mRNA for phytochrome A,
            complete cds
          Length = 3866

 Score =  426 bits (215), Expect = e-116
 Identities = 386/443 (87%)
 Strand = Plus / Plus

                                                                        
Query: 3    tctttgaacttacagggtatgatagggttatggcttacaagttccatgaagataaccatg 62
            ||||||| || ||||| |||||||| ||||||||||| ||||||||||||||| ||||||
Sbjct: 836  tctttgacctcacaggatatgatagagttatggcttataagttccatgaagatgaccatg 895

                                                                        
Query: 63   gcgaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcactatc 122
            | || |||||||| ||||||||||||||||| ||||| |||||||| |||||||| ||||
Sbjct: 896  gtgaagtctttgctgagatcacaaagcctggtcttgaaccttatcttggcctgcattatc 955

                                                                        
Query: 123  cagccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggatga 182
            |||| |||||||||||||| ||||| |||||||| ||||||||||||||||| |||||||
Sbjct: 956  cagctactgatatccctcaggcagccaggtttcttttcatgaagaacaaagtccggatga 1015

                                                                        
Query: 183  tttgcgatgtccgcgcaagaaccctaaaggtcatcgaagatgaggcactcccctttgata 242
            |||| |||  ||| |||||| |  | ||| | |||||||||||| | |||| ||| ||||
Sbjct: 1016 tttgtgattgccgtgcaagatctatcaagattatcgaagatgagtcgctccacttggata 1075

                                                                        
Query: 243  ttagcttgtgtggttcatcactcagggcagcacacagctgtcaccttcagtatatggaga 302
            ||||||| ||||||||| |||| |||||| ||||||| ||||| ||||||||||||||||
Sbjct: 1076 ttagcttatgtggttcaacactgagggcaccacacagttgtcatcttcagtatatggaga 1135

                                                                        
Query: 303  acatgaactcgattgcatcccttgtcatggctgttgtggttaatgagagtgaagaggacg 362
            |||||||||||||||||||||||||||||||||||||||||||||||| ||| || || |
Sbjct: 1136 acatgaactcgattgcatcccttgtcatggctgttgtggttaatgagaatgaggatgatg 1195

                                                                        
Query: 363  acgaggccgagtccgaacaaccagcacagcagcagaagaagaagatactatggggccttg 422
            | || |  | | | || ||||| ||||| |||||||||| ||||| ||||||||| ||  
Sbjct: 1196 atgaagttggggctgatcaacctgcacaacagcagaagaggaagaaactatggggactcc 1255

                                   
Query: 423  ttgtttgccaccatgagagcccc 445
            |||||||||||||||||||||||
Sbjct: 1256 ttgtttgccaccatgagagcccc 1278

---

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  426 bits (215), Expect = e-116
 Identities = 386/443 (87%)
 Strand = Plus / Minus

                                                                            
Query: 3        tctttgaacttacagggtatgatagggttatggcttacaagttccatgaagataaccatg 62
                ||||||| || ||||| |||||||| ||||||||||| ||||||||||||||| ||||||
Sbjct: 28970333 tctttgacctcacaggatatgatagagttatggcttataagttccatgaagatgaccatg 28970274

                                                                            
Query: 63       gcgaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcactatc 122
                | || |||||||| ||||||||||||||||| ||||| |||||||| |||||||| ||||
Sbjct: 28970273 gtgaagtctttgctgagatcacaaagcctggtcttgaaccttatcttggcctgcattatc 28970214

                                                                            
Query: 123      cagccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggatga 182
                |||| |||||||||||||| ||||| |||||||| ||||||||||||||||| |||||||
Sbjct: 28970213 cagctactgatatccctcaggcagccaggtttcttttcatgaagaacaaagtccggatga 28970154

                                                                            
Query: 183      tttgcgatgtccgcgcaagaaccctaaaggtcatcgaagatgaggcactcccctttgata 242
                |||| |||  ||| |||||| |  | ||| | |||||||||||| | |||| ||| ||||
Sbjct: 28970153 tttgtgattgccgtgcaagatctatcaagattatcgaagatgagtcgctccacttggata 28970094

                                                                            
Query: 243      ttagcttgtgtggttcatcactcagggcagcacacagctgtcaccttcagtatatggaga 302
                ||||||| ||||||||| |||| |||||| ||||||| ||||| ||||||||||||||||
Sbjct: 28970093 ttagcttatgtggttcaacactgagggcaccacacagttgtcatcttcagtatatggaga 28970034

                                                                            
Query: 303      acatgaactcgattgcatcccttgtcatggctgttgtggttaatgagagtgaagaggacg 362
                |||||||||||||||||||||||||||||||||||||||||||||||| ||| || || |
Sbjct: 28970033 acatgaactcgattgcatcccttgtcatggctgttgtggttaatgagaatgaggatgatg 28969974

                                                                            
Query: 363      acgaggccgagtccgaacaaccagcacagcagcagaagaagaagatactatggggccttg 422
                | || |  | | | || ||||| ||||| |||||||||| ||||| ||||||||| ||  
Sbjct: 28969973 atgaagttggggctgatcaacctgcacaacagcagaagaggaagaaactatggggactcc 28969914

                                       
Query: 423      ttgtttgccaccatgagagcccc 445
                |||||||||||||||||||||||
Sbjct: 28969913 ttgtttgccaccatgagagcccc 28969891



 Score =  105 bits (53), Expect = 1e-19
 Identities = 83/93 (89%)
 Strand = Plus / Plus

                                                                            
Query: 98       gagccttatctcggcctgcactatccagccactgatatccctcaagcagctaggtttctg 157
                ||||| ||||| ||||||||||| ||||||||||| || ||||| ||| | |||||| ||
Sbjct: 30804763 gagccgtatcttggcctgcactacccagccactgacattcctcaggcatccaggtttttg 30804822

                                                 
Query: 158      ttcatgaagaacaaagtgcggatgatttgcgat 190
                |||||||||||||||||||||||||| ||||||
Sbjct: 30804823 ttcatgaagaacaaagtgcggatgatatgcgat 30804855



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                                  
Query: 20       tatgatagggttatggcttacaagttccatgaagataaccatggcgaggt 69
                ||||| ||||| ||||| |||||||||||||| ||| | ||||| |||||
Sbjct: 30804685 tatgacagggtgatggcgtacaagttccatgaggatgagcatggtgaggt 30804734

---

>emb|X14172.1|OSPHY18 Rice phy 18 gene for phytochrome
          Length = 9979

 Score =  426 bits (215), Expect = e-116
 Identities = 386/443 (87%)
 Strand = Plus / Plus

                                                                        
Query: 3    tctttgaacttacagggtatgatagggttatggcttacaagttccatgaagataaccatg 62
            ||||||| || ||||| |||||||| ||||||||||| ||||||||||||||| ||||||
Sbjct: 5317 tctttgacctcacaggatatgatagagttatggcttataagttccatgaagatgaccatg 5376

                                                                        
Query: 63   gcgaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcactatc 122
            | || |||||||| ||||||||||||||||| ||||| |||||||| |||||||| ||||
Sbjct: 5377 gtgaagtctttgctgagatcacaaagcctggtcttgaaccttatcttggcctgcattatc 5436

                                                                        
Query: 123  cagccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggatga 182
            |||| |||||||||||||| ||||| |||||||| ||||||||||||||||| |||||||
Sbjct: 5437 cagctactgatatccctcaggcagccaggtttcttttcatgaagaacaaagtccggatga 5496

                                                                        
Query: 183  tttgcgatgtccgcgcaagaaccctaaaggtcatcgaagatgaggcactcccctttgata 242
            |||| |||  ||| |||||| |  | ||| | |||||||||||| | |||| ||| ||||
Sbjct: 5497 tttgtgattgccgtgcaagatctatcaagattatcgaagatgagtcgctccacttggata 5556

                                                                        
Query: 243  ttagcttgtgtggttcatcactcagggcagcacacagctgtcaccttcagtatatggaga 302
            ||||||| ||||||||| |||| |||||| ||||||| ||||| ||||||||||||||||
Sbjct: 5557 ttagcttatgtggttcaacactgagggcaccacacagttgtcatcttcagtatatggaga 5616

                                                                        
Query: 303  acatgaactcgattgcatcccttgtcatggctgttgtggttaatgagagtgaagaggacg 362
            |||||||||||||||||||||||||||||||||||||||||||||||| ||| || || |
Sbjct: 5617 acatgaactcgattgcatcccttgtcatggctgttgtggttaatgagaatgaggatgatg 5676

                                                                        
Query: 363  acgaggccgagtccgaacaaccagcacagcagcagaagaagaagatactatggggccttg 422
            | || |  | | | || ||||| ||||| |||||||||| ||||| ||||||||| ||  
Sbjct: 5677 atgaagttggggctgatcaacctgcacaacagcagaagaggaagaaactatggggactcc 5736

                                   
Query: 423  ttgtttgccaccatgagagcccc 445
            |||||||||||||||||||||||
Sbjct: 5737 ttgtttgccaccatgagagcccc 5759

---

>dbj|AK072482.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023125J06, full
            insert sequence
          Length = 3903

 Score =  426 bits (215), Expect = e-116
 Identities = 386/443 (87%)
 Strand = Plus / Plus

                                                                        
Query: 3    tctttgaacttacagggtatgatagggttatggcttacaagttccatgaagataaccatg 62
            ||||||| || ||||| |||||||| ||||||||||| ||||||||||||||| ||||||
Sbjct: 884  tctttgacctcacaggatatgatagagttatggcttataagttccatgaagatgaccatg 943

                                                                        
Query: 63   gcgaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcactatc 122
            | || |||||||| ||||||||||||||||| ||||| |||||||| |||||||| ||||
Sbjct: 944  gtgaagtctttgctgagatcacaaagcctggtcttgaaccttatcttggcctgcattatc 1003

                                                                        
Query: 123  cagccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggatga 182
            |||| |||||||||||||| ||||| |||||||| ||||||||||||||||| |||||||
Sbjct: 1004 cagctactgatatccctcaggcagccaggtttcttttcatgaagaacaaagtccggatga 1063

                                                                        
Query: 183  tttgcgatgtccgcgcaagaaccctaaaggtcatcgaagatgaggcactcccctttgata 242
            |||| |||  ||| |||||| |  | ||| | |||||||||||| | |||| ||| ||||
Sbjct: 1064 tttgtgattgccgtgcaagatctatcaagattatcgaagatgagtcgctccacttggata 1123

                                                                        
Query: 243  ttagcttgtgtggttcatcactcagggcagcacacagctgtcaccttcagtatatggaga 302
            ||||||| ||||||||| |||| |||||| ||||||| ||||| ||||||||||||||||
Sbjct: 1124 ttagcttatgtggttcaacactgagggcaccacacagttgtcatcttcagtatatggaga 1183

                                                                        
Query: 303  acatgaactcgattgcatcccttgtcatggctgttgtggttaatgagagtgaagaggacg 362
            |||||||||||||||||||||||||||||||||||||||||||||||| ||| || || |
Sbjct: 1184 acatgaactcgattgcatcccttgtcatggctgttgtggttaatgagaatgaggatgatg 1243

                                                                        
Query: 363  acgaggccgagtccgaacaaccagcacagcagcagaagaagaagatactatggggccttg 422
            | || |  | | | || ||||| ||||| |||||||||| ||||| ||||||||| ||  
Sbjct: 1244 atgaagttggggctgatcaacctgcacaacagcagaagaggaagaaactatggggactcc 1303

                                   
Query: 423  ttgtttgccaccatgagagcccc 445
            |||||||||||||||||||||||
Sbjct: 1304 ttgtttgccaccatgagagcccc 1326

---

>dbj|AK065707.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013035O04, full
            insert sequence
          Length = 3649

 Score =  426 bits (215), Expect = e-116
 Identities = 386/443 (87%)
 Strand = Plus / Minus

                                                                        
Query: 3    tctttgaacttacagggtatgatagggttatggcttacaagttccatgaagataaccatg 62
            ||||||| || ||||| |||||||| ||||||||||| ||||||||||||||| ||||||
Sbjct: 2467 tctttgacctcacaggatatgatagagttatggcttataagttccatgaagatgaccatg 2408

                                                                        
Query: 63   gcgaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcactatc 122
            | || |||||||| ||||||||||||||||| ||||| |||||||| |||||||| ||||
Sbjct: 2407 gtgaagtctttgctgagatcacaaagcctggtcttgaaccttatcttggcctgcattatc 2348

                                                                        
Query: 123  cagccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggatga 182
            |||| |||||||||||||| ||||| |||||||| ||||||||||||||||| |||||||
Sbjct: 2347 cagctactgatatccctcaggcagccaggtttcttttcatgaagaacaaagtccggatga 2288

                                                                        
Query: 183  tttgcgatgtccgcgcaagaaccctaaaggtcatcgaagatgaggcactcccctttgata 242
            |||| |||  ||| |||||| |  | ||| | |||||||||||| | |||| ||| ||||
Sbjct: 2287 tttgtgattgccgtgcaagatctatcaagattatcgaagatgagtcgctccacttggata 2228

                                                                        
Query: 243  ttagcttgtgtggttcatcactcagggcagcacacagctgtcaccttcagtatatggaga 302
            ||||||| ||||||||| |||| |||||| ||||||| ||||| ||||||||||||||||
Sbjct: 2227 ttagcttatgtggttcaacactgagggcaccacacagttgtcatcttcagtatatggaga 2168

                                                                        
Query: 303  acatgaactcgattgcatcccttgtcatggctgttgtggttaatgagagtgaagaggacg 362
            |||||||||||||||||||||||||||||||||||||||||||||||| ||| || || |
Sbjct: 2167 acatgaactcgattgcatcccttgtcatggctgttgtggttaatgagaatgaggatgatg 2108

                                                                        
Query: 363  acgaggccgagtccgaacaaccagcacagcagcagaagaagaagatactatggggccttg 422
            | || |  | | | || ||||| ||||| |||||||||| ||||| ||||||||| ||  
Sbjct: 2107 atgaagttggggctgatcaacctgcacaacagcagaagaggaagaaactatggggactcc 2048

                                   
Query: 423  ttgtttgccaccatgagagcccc 445
            |||||||||||||||||||||||
Sbjct: 2047 ttgtttgccaccatgagagcccc 2025

---

>gb|AY260865.1| Zea mays phytochrome A2 (phyA2) gene, complete cds
          Length = 6700

 Score =  414 bits (209), Expect = e-112
 Identities = 386/445 (86%)
 Strand = Plus / Plus

                                                                        
Query: 1    agtctttgaacttacagggtatgatagggttatggcttacaagttccatgaagataacca 60
            ||||||||| || ||||| ||||| |||||||||||||||||||||||||||||| | ||
Sbjct: 2656 agtctttgacctgacaggttatgacagggttatggcttacaagttccatgaagatgagca 2715

                                                                        
Query: 61   tggcgaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcacta 120
            ||| |||||||| || |||||||| || |||||  ||||||| ||| | |||||||||||
Sbjct: 2716 tggggaggtcttcgctgagatcaccaaacctggtattgagccctatataggcctgcacta 2775

                                                                        
Query: 121  tccagccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggat 180
            |||||||||||||||||||||||| || |||||||| |||||||||||||||||  | ||
Sbjct: 2776 tccagccactgatatccctcaagctgccaggtttctcttcatgaagaacaaagtcagaat 2835

                                                                        
Query: 181  gatttgcgatgtccgcgcaagaaccctaaaggtcatcgaagatgaggcactcccctttga 240
            ||| || |||  ||| |||||| || | ||| | || ||||||||||||||| || ||||
Sbjct: 2836 gatctgtgattgccgtgcaagatccgtgaagattattgaagatgaggcactctccattga 2895

                                                                        
Query: 241  tattagcttgtgtggttcatcactcagggcagcacacagctgtcaccttcagtatatgga 300
            ||||||||||||||||||| | || || ||| |||| |||||||||||| ||||||||||
Sbjct: 2896 tattagcttgtgtggttcaactcttagagcaccacatagctgtcaccttaagtatatgga 2955

                                                                        
Query: 301  gaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgagagtgaagagga 360
            |||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||
Sbjct: 2956 gaacatgaactcgattgcatcccttgtcatggctgttgtggtcaatgaaaatgaagagga 3015

                                                                        
Query: 361  cgacgaggccgagtccgaacaaccagcacagcagcagaagaagaagatactatggggcct 420
             || ||  ||||| | ||||||||| |||| ||||||||||||||||  || ||||| ||
Sbjct: 3016 tgatgaacccgagcctgaacaaccaccacaacagcagaagaagaagaggctgtggggtct 3075

                                     
Query: 421  tgttgtttgccaccatgagagcccc 445
              |||||||||||||||||||||||
Sbjct: 3076 cattgtttgccaccatgagagcccc 3100

---

>gb|AY234826.1| Zea mays cultivar B73 phytochrome A1 apoprotein (phyA1) gene,
            complete cds
          Length = 8510

 Score =  414 bits (209), Expect = e-112
 Identities = 386/445 (86%)
 Strand = Plus / Plus

                                                                        
Query: 1    agtctttgaacttacagggtatgatagggttatggcttacaagttccatgaagataacca 60
            |||||| || |||||||| ||||| |||||||||||||||||||||||||||||| | ||
Sbjct: 3982 agtcttcgaccttacaggttatgacagggttatggcttacaagttccatgaagatgagca 4041

                                                                        
Query: 61   tggcgaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcacta 120
            ||| ||||||||||| |||||||| || |||||  ||||||| ||||| |||||||||||
Sbjct: 4042 tggggaggtctttgctgagatcaccaaacctggtattgagccctatctaggcctgcacta 4101

                                                                        
Query: 121  tccagccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggat 180
            ||| |||||||||||||||||||| || |||||||| |||||||||||||||||  ||||
Sbjct: 4102 tccggccactgatatccctcaagctgccaggtttctcttcatgaagaacaaagtcaggat 4161

                                                                        
Query: 181  gatttgcgatgtccgcgcaagaaccctaaaggtcatcgaagatgaggcactcccctttga 240
            ||| || |||  ||| |||||| |  | ||| | || ||||||||||| ||| || ||||
Sbjct: 4162 gatctgtgattgccgtgcaagatcggtgaagattattgaagatgaggcgctctccattga 4221

                                                                        
Query: 241  tattagcttgtgtggttcatcactcagggcagcacacagctgtcaccttcagtatatgga 300
            ||||||||||||||||||| | || || ||| |||| |||||||||||||||||||||||
Sbjct: 4222 tattagcttgtgtggttcaactcttagagcaccacatagctgtcaccttcagtatatgga 4281

                                                                        
Query: 301  gaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgagagtgaagagga 360
             |||||||||||||| |||||||||||||||||||||||||||||||| | |||||| ||
Sbjct: 4282 aaacatgaactcgatcgcatcccttgtcatggctgttgtggttaatgaaaatgaagacga 4341

                                                                        
Query: 361  cgacgaggccgagtccgaacaaccagcacagcagcagaagaagaagatactatggggcct 420
             |||||  ||||||| ||||||||| |||| |||||||||| ||||| ||| ||||| ||
Sbjct: 4342 tgacgaacccgagtctgaacaaccaccacaacagcagaagaggaagaaactgtggggtct 4401

                                     
Query: 421  tgttgtttgccaccatgagagcccc 445
              ||||||||||||| |||||||||
Sbjct: 4402 cattgtttgccaccacgagagcccc 4426

---

>gb|U61216.1|SVU61216 Stipa viridula phytochrome (PHYA) gene, partial cds
          Length = 318

 Score =  361 bits (182), Expect = 1e-96
 Identities = 275/306 (89%)
 Strand = Plus / Plus

                                                                       
Query: 140 caagcagctaggtttctgttcatgaagaacaaagtgcggatgatttgcgatgtccgcgca 199
           |||||||| |||||||| |||||||| |||||||| ||||||||||| |||  ||| |||
Sbjct: 1   caagcagccaggtttcttttcatgaaaaacaaagttcggatgatttgtgattgccgtgca 60

                                                                       
Query: 200 agaaccctaaaggtcatcgaagatgaggcactcccctttgatattagcttgtgtggttca 259
           ||| || ||||| |||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 61  agatccataaagatcattgaagatgagacactcccctttgatattagcttgtgtggttca 120

                                                                       
Query: 260 tcactcagggcagcacacagctgtcaccttcagtatatggagaacatgaactcgattgca 319
            ||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 121 gcactcagggcaccacacagttgtcaccttcagtatatggagaacatgaactcaattgca 180

                                                                       
Query: 320 tcccttgtcatggctgttgtggttaatgagagtgaagaggacgacgaggccgagtccgaa 379
           ||||||||||||||||| ||||||||||||| ||||||||| || || | |||| | |||
Sbjct: 181 tcccttgtcatggctgtggtggttaatgagaatgaagaggatgatgaagtcgaggctgaa 240

                                                                       
Query: 380 caaccagcacagcagcagaagaagaagatactatggggccttgttgtttgccaccatgag 439
           |||||||||||||||||||||| ||| | ||| ||||||||  |||||||||||||||||
Sbjct: 241 caaccagcacagcagcagaagaggaaaagactgtggggcctccttgtttgccaccatgag 300

                 
Query: 440 agcccc 445
           ||||||
Sbjct: 301 agcccc 306

---

>gb|U61213.1|PPU61213 Poa pratensis phytochrome (PHYA) gene, partial cds
          Length = 318

 Score =  337 bits (170), Expect = 2e-89
 Identities = 272/306 (88%)
 Strand = Plus / Plus

                                                                       
Query: 140 caagcagctaggtttctgttcatgaagaacaaagtgcggatgatttgcgatgtccgcgca 199
           |||||||| |||||||| ||||||||||||||||| ||||||||||| |||  ||| || 
Sbjct: 1   caagcagcaaggtttcttttcatgaagaacaaagtacggatgatttgtgattgccgtgcg 60

                                                                       
Query: 200 agaaccctaaaggtcatcgaagatgaggcactcccctttgatattagcttgtgtggttca 259
           ||| || ||||||| ||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 61  agatccataaaggtgatcgaagctgaggcactcccctttgaaattagcttgtgtggttca 120

                                                                       
Query: 260 tcactcagggcagcacacagctgtcaccttcagtatatggagaacatgaactcgattgca 319
            |||| |||||| ||||||  |||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcactaagggcaccacacaattgtcaccttcagtatatggagaacatgaactcgattgca 180

                                                                       
Query: 320 tcccttgtcatggctgttgtggttaatgagagtgaagaggacgacgaggccgagtccgaa 379
           ||||||||||||||||||||||||||||||| ||| ||||| || || | |||||| || 
Sbjct: 181 tcccttgtcatggctgttgtggttaatgagaatgacgaggatgatgaagtcgagtctgac 240

                                                                       
Query: 380 caaccagcacagcagcagaagaagaagatactatggggccttgttgtttgccaccatgag 439
           |||||| || |||||||||||||||||| ||| ||||||||  | |||||||||||||| 
Sbjct: 241 caaccaacagagcagcagaagaagaagaaactgtggggcctcctggtttgccaccatgaa 300

                 
Query: 440 agcccc 445
           ||||||
Sbjct: 301 agcccc 306

---

>gb|U61196.1|DUU61196 Danthonia unispicata phytochrome (PHYA) gene, partial cds
          Length = 318

 Score =  258 bits (130), Expect = 1e-65
 Identities = 262/306 (85%)
 Strand = Plus / Plus

                                                                       
Query: 140 caagcagctaggtttctgttcatgaagaacaaagtgcggatgatttgcgatgtccgcgca 199
           ||||| || |||||||| ||||||||||||||||| |||||||| || |||   || |||
Sbjct: 1   caagctgccaggtttcttttcatgaagaacaaagtccggatgatctgtgattgtcgtgca 60

                                                                       
Query: 200 agaaccctaaaggtcatcgaagatgaggcactcccctttgatattagcttgtgtggttca 259
           ||| || | ||| | || |||||||||||| || ||  ||| ||||||||||||||||||
Sbjct: 61  agatccgtgaagattattgaagatgaggcaatctccactgacattagcttgtgtggttca 120

                                                                       
Query: 260 tcactcagggcagcacacagctgtcaccttcagtatatggagaacatgaactcgattgca 319
            | || || ||| |||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 121 actcttagagcaccacatagctgtcaccttcagtatatggagaacatgaactcaattgca 180

                                                                       
Query: 320 tcccttgtcatggctgttgtggttaatgagagtgaagaggacgacgaggccgagtccgaa 379
           ||||||||||||||||||||||||||||| | ||||||||| || || |||||| | |||
Sbjct: 181 tcccttgtcatggctgttgtggttaatgaaaatgaagaggatgatgaagccgagcctgaa 240

                                                                       
Query: 380 caaccagcacagcagcagaagaagaagatactatggggccttgttgtttgccaccatgag 439
           || ||| |||| ||||||||||||||||  || ||||| ||  |||||||||||||||||
Sbjct: 241 cagccaccacaacagcagaagaagaagaggctgtggggtctcattgtttgccaccatgag 300

                 
Query: 440 agcccc 445
           ||||||
Sbjct: 301 agcccc 306

---

>gb|U61211.1|PAU61211 Phragmites australis phytochrome (PHYA) gene, partial cds
          Length = 312

 Score =  256 bits (129), Expect = 5e-65
 Identities = 255/297 (85%)
 Strand = Plus / Plus

                                                                       
Query: 149 aggtttctgttcatgaagaacaaagtgcggatgatttgcgatgtccgcgcaagaacccta 208
           |||||||| ||||||||||||||||| || ||||| || |||   || |||||| || | 
Sbjct: 4   aggtttcttttcatgaagaacaaagtccgaatgatctgtgattgtcgtgcaagatccgtg 63

                                                                       
Query: 209 aaggtcatcgaagatgaggcactcccctttgatattagcttgtgtggttcatcactcagg 268
           ||| | || |||||||||| |||| || ||||||||||||||||||||||| | || || 
Sbjct: 64  aagattattgaagatgagggactctccattgatattagcttgtgtggttcaactcttaga 123

                                                                       
Query: 269 gcagcacacagctgtcaccttcagtatatggagaacatgaactcgattgcatcccttgtc 328
           ||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 gcgccacacagttgtcaccttcagtatatggagaacatgaactcgattgcatcccttgtc 183

                                                                       
Query: 329 atggctgttgtggttaatgagagtgaagaggacgacgaggccgagtccgaacaaccagca 388
           |||||||||||||||||||| | ||||||||| || || |||||  | | ||||||| ||
Sbjct: 184 atggctgttgtggttaatgaaaatgaagaggatgatgaagccgaaccaggacaaccatca 243

                                                                    
Query: 389 cagcagcagaagaagaagatactatggggccttgttgtttgccaccatgagagcccc 445
           || |||| ||||||||||| ||| ||||| ||  |||||||||||||||||||||||
Sbjct: 244 caacagctgaagaagaagaaactgtggggtctcattgtttgccaccatgagagcccc 300

---

>gb|U61209.1|PSU61209 Pennisetum setaceum phytochrome (PHYA) gene, partial cds
          Length = 318

 Score =  242 bits (122), Expect = 8e-61
 Identities = 260/306 (84%)
 Strand = Plus / Plus

                                                                       
Query: 140 caagcagctaggtttctgttcatgaagaacaaagtgcggatgatttgcgatgtccgcgca 199
           ||||| || |||||||| || |||||||||||||| || ||||| ||||||   || |||
Sbjct: 1   caagctgccaggtttctttttatgaagaacaaagtacgaatgatctgcgattgtcgtgca 60

                                                                       
Query: 200 agaaccctaaaggtcatcgaagatgaggcactcccctttgatattagcttgtgtggttca 259
           ||| |  | ||| | || ||||| ||||||||| || |||||||||||||||||||||||
Sbjct: 61  agatctgtgaagattattgaagacgaggcactctccattgatattagcttgtgtggttca 120

                                                                       
Query: 260 tcactcagggcagcacacagctgtcaccttcagtatatggagaacatgaactcgattgca 319
            | || || ||| ||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 121 actcttagagcaccacacagttgtcaccttcagtatatggagaacatgaactcaattgca 180

                                                                       
Query: 320 tcccttgtcatggctgttgtggttaatgagagtgaagaggacgacgaggccgagtccgaa 379
           ||||||||||||||||||||||| ||||| | |||||| || || ||  ||||| | || 
Sbjct: 181 tcccttgtcatggctgttgtggtcaatgaaaatgaagaagatgatgaacccgagcctgag 240

                                                                       
Query: 380 caaccagcacagcagcagaagaagaagatactatggggccttgttgtttgccaccatgag 439
           |||||| |||||||||||||||||||||  || ||||| ||  |||||||||||||||||
Sbjct: 241 caaccaccacagcagcagaagaagaagaggctgtggggtctcattgtttgccaccatgag 300

                 
Query: 440 agcccc 445
           ||||||
Sbjct: 301 agcccc 306

---

>gb|U61185.1|ALU61185 Aristida longiseta phytochrome (PHYA) gene, partial cds
          Length = 318

 Score =  234 bits (118), Expect = 2e-58
 Identities = 259/306 (84%)
 Strand = Plus / Plus

                                                                       
Query: 140 caagcagctaggtttctgttcatgaagaacaaagtgcggatgatttgcgatgtccgcgca 199
           ||||| || |||||||| ||||||||||||||||| || |||||||| |||   || || 
Sbjct: 1   caagctgccaggtttcttttcatgaagaacaaagtacgaatgatttgtgattgtcgtgcg 60

                                                                       
Query: 200 agaaccctaaaggtcatcgaagatgaggcactcccctttgatattagcttgtgtggttca 259
           ||| || | ||| | || ||||||||||||||  || ||||||||||||| ||||| |||
Sbjct: 61  agatccgtgaagattattgaagatgaggcactttccattgatattagcttatgtggctca 120

                                                                       
Query: 260 tcactcagggcagcacacagctgtcaccttcagtatatggagaacatgaactcgattgca 319
            | || || ||| ||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 121 actcttagagcaccacacagttgtcaccttcagtatatggagaacatgaagtcgattgca 180

                                                                       
Query: 320 tcccttgtcatggctgttgtggttaatgagagtgaagaggacgacgaggccgagtccgaa 379
           || ||||||||||||||||||||||| || | |||||||| ||| || |||||| | | |
Sbjct: 181 tctcttgtcatggctgttgtggttaacgaaaatgaagagggcgatgaagccgagcctgga 240

                                                                       
Query: 380 caaccagcacagcagcagaagaagaagatactatggggccttgttgtttgccaccatgag 439
           |||||| |||| |||||| ||||||||| ||| ||||| ||  |||||||||||||||||
Sbjct: 241 caaccaccacaacagcagcagaagaagaaactgtggggtctacttgtttgccaccatgag 300

                 
Query: 440 agcccc 445
           ||||||
Sbjct: 301 agcccc 306

---

>gb|U61190.1|BGU61190 Bouteloua gracilis phytochrome (PHYA) gene, partial cds
          Length = 318

 Score =  224 bits (113), Expect = 2e-55
 Identities = 248/293 (84%)
 Strand = Plus / Plus

                                                                       
Query: 152 tttctgttcatgaagaacaaagtgcggatgatttgcgatgtccgcgcaagaaccctaaag 211
           ||||| |||||||||||||||||  | ||||| ||||||   || |||||| |  |||||
Sbjct: 13  tttcttttcatgaagaacaaagtcagaatgatctgcgattgtcgtgcaagatctgtaaag 72

                                                                       
Query: 212 gtcatcgaagatgaggcactcccctttgatattagcttgtgtggttcatcactcagggca 271
            | || ||||||||||||  | || |||| || ||||||||||||||| | || ||||||
Sbjct: 73  ataattgaagatgaggcagcctccattgacatcagcttgtgtggttcaactctgagggca 132

                                                                       
Query: 272 gcacacagctgtcaccttcagtatatggagaacatgaactcgattgcatcccttgtcatg 331
            |||| || ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 133 ccacatagttgtcaccttcagtatatggagaatatgaactcgattgcatcccttgtcatg 192

                                                                       
Query: 332 gctgttgtggttaatgagagtgaagaggacgacgaggccgagtccgaacaaccagcacag 391
           |||||||| |||||||||  ||||||||| || || | |||| | ||||| ||| |||||
Sbjct: 193 gctgttgtagttaatgaggatgaagaggatgatgaagtcgagcctgaacagccatcacag 252

                                                                
Query: 392 cagcagaagaagaagatactatggggccttgttgtttgccaccatgagagccc 444
           || |||||||||||||  |||||||| || ||||| |||||||||||||||||
Sbjct: 253 caacagaagaagaagaagctatggggtctcgttgtctgccaccatgagagccc 305

---

>gb|U61199.1|ECU61199 Eragrostis cilianense phytochrome (PHYA) gene, partial cds
          Length = 318

 Score =  210 bits (106), Expect = 3e-51
 Identities = 253/302 (83%)
 Strand = Plus / Plus

                                                                       
Query: 140 caagcagctaggtttctgttcatgaagaacaaagtgcggatgatttgcgatgtccgcgca 199
           ||||| || |||||||||||||||||||||||||| || ||||| || |||  ||| |||
Sbjct: 1   caagctgcaaggtttctgttcatgaagaacaaagtccgaatgatctgtgattgccgagca 60

                                                                       
Query: 200 agaaccctaaaggtcatcgaagatgaggcactcccctttgatattagcttgtgtggttca 259
           ||| || | ||||| ||  |||||||||||  | |  ||||| |||||||||||||||||
Sbjct: 61  agatccgtgaaggttattaaagatgaggcagcctctattgatgttagcttgtgtggttca 120

                                                                       
Query: 260 tcactcagggcagcacacagctgtcaccttcagtatatggagaacatgaactcgattgca 319
            | || |||||| | || || ||||||||||||||||||||||| |||||||| ||||||
Sbjct: 121 actctgagggcaccgcatagttgtcaccttcagtatatggagaatatgaactctattgca 180

                                                                       
Query: 320 tcccttgtcatggctgttgtggttaatgagagtgaagaggacgacgaggccgagtccgaa 379
           |||||||||||||| ||||| |||||||||| ||||||||  || ||| ||||| | |||
Sbjct: 181 tcccttgtcatggcagttgtagttaatgagaatgaagagggtgatgagcccgagcctgaa 240

                                                                       
Query: 380 caaccagcacagcagcagaagaagaagatactatggggccttgttgtttgccaccatgag 439
           |||||| | || ||||| ||||||||||  || ||||| ||  |||||||||||||||||
Sbjct: 241 caaccaccgcaacagcaaaagaagaagaagctgtggggtctcattgtttgccaccatgag 300

             
Query: 440 ag 441
           ||
Sbjct: 301 ag 302

---

>gb|AF190072.1|AF190072 Calycanthus floridus phytochrome A (PHYA) gene, partial cds
          Length = 1170

 Score =  200 bits (101), Expect = 3e-48
 Identities = 164/185 (88%)
 Strand = Plus / Plus

                                                                       
Query: 5   tttgaacttacagggtatgatagggttatggcttacaagttccatgaagataaccatggc 64
           ||||||||||| |||||||||||||| |||||||| ||||||||||||||| ||||||| 
Sbjct: 133 tttgaacttacggggtatgatagggtgatggcttataagttccatgaagatgaccatggt 192

                                                                       
Query: 65  gaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcactatcca 124
           |||||| || | || ||||||||||||||||| || |||||||| || || |||||||||
Sbjct: 193 gaggtcatttctgaaatcacaaagcctggcctagaaccttatctgggtctacactatcca 252

                                                                       
Query: 125 gccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgatt 184
           || ||||||||||| ||||| || |||||| |||| ||||||||||| ||||||||||||
Sbjct: 253 gctactgatatcccccaagctgccaggtttttgtttatgaagaacaaggtgcggatgatt 312

                
Query: 185 tgcga 189
           |||||
Sbjct: 313 tgcga 317

---

>gb|U61208.1|PCU61208 Panicum capillare phytochrome (PHYA) gene, partial cds
          Length = 315

 Score =  186 bits (94), Expect = 4e-44
 Identities = 195/228 (85%), Gaps = 3/228 (1%)
 Strand = Plus / Plus

                                                                       
Query: 218 gaagatgaggcactcccctttgatattagcttgtgtggttcatcactcagggcagcacac 277
           |||||||| |||||| || ||||||||||||||||||||||| | || || ||| |||||
Sbjct: 79  gaagatgaagcactctccattgatattagcttgtgtggttcaactcttagagcaccacac 138

                                                                       
Query: 278 agctgtcaccttcagtatatggagaacatgaactcgattgcatcccttgtcatggctgtt 337
           || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 139 agttgtcaccttcagtatatggagaacatgaactcaattgcatcccttgtcatggctgtt 198

                                                                       
Query: 338 gtggttaatgagagtgaagaggacgacgaggccgagtccgaacaaccagcacagcagcag 397
           ||||| ||||| | ||||||||| || ||  || |  | |||||||   |||||||||||
Sbjct: 199 gtggtcaatgaaaatgaagaggatgatgaacccaatcctgaacaac---cacagcagcag 255

                                                           
Query: 398 aagaagaagatactatggggccttgttgtttgccaccatgagagcccc 445
            |||||||||  || ||||| ||  ||||||| || ||||||||||||
Sbjct: 256 cagaagaagaggctgtggggtctccttgtttgtcatcatgagagcccc 303

---

>gb|U61195.1|CLU61195 Calamovilfa longifolia phytochrome (PHYA) gene, partial cds
          Length = 318

 Score =  178 bits (90), Expect = 1e-41
 Identities = 249/302 (82%)
 Strand = Plus / Plus

                                                                       
Query: 140 caagcagctaggtttctgttcatgaagaacaaagtgcggatgatttgcgatgtccgcgca 199
           ||||| || |||||| | ||||||||||||||||| || ||||| || |||   ||||||
Sbjct: 1   caagctgccaggtttgttttcatgaagaacaaagtccgaatgatctgtgattgtcgcgca 60

                                                                       
Query: 200 agaaccctaaaggtcatcgaagatgaggcactcccctttgatattagcttgtgtggttca 259
           ||| |  ||||| | || |||||||| ||| || || || | ||||||||||||||||||
Sbjct: 61  agatctgtaaagattattgaagatgaagcagtctccattaacattagcttgtgtggttca 120

                                                                       
Query: 260 tcactcagggcagcacacagctgtcaccttcagtatatggagaacatgaactcgattgca 319
            | || |||||| || | || ||||| ||||||||||||||||| ||||||| |||||||
Sbjct: 121 actctgagggcaccaaatagttgtcatcttcagtatatggagaatatgaacttgattgca 180

                                                                       
Query: 320 tcccttgtcatggctgttgtggttaatgagagtgaagaggacgacgaggccgagtccgaa 379
           |||||||| |||| |||||| |||||||||| ||||||||| ||||| || ||| | |||
Sbjct: 181 tcccttgtgatggttgttgtagttaatgagaatgaagaggatgacgaagcggagactgaa 240

                                                                       
Query: 380 caaccagcacagcagcagaagaagaagatactatggggccttgttgtttgccaccatgag 439
           |||||| |||| |||||||| || |  | ||| ||||| ||  |||||||||||||||||
Sbjct: 241 caaccaccacaacagcagaaaaaaagaaaactgtggggtctcattgtttgccaccatgag 300

             
Query: 440 ag 441
           ||
Sbjct: 301 ag 302

---

>gb|AF276743.1|AF276743 Smilax rotundifolia phytochrome A (PHYA) gene, partial cds
          Length = 1269

 Score =  172 bits (87), Expect = 6e-40
 Identities = 156/179 (87%)
 Strand = Plus / Plus

                                                                       
Query: 5   tttgaacttacagggtatgatagggttatggcttacaagttccatgaagataaccatggc 64
           |||||||| |||||||| ||| | || |||||||||||||||||||| ||  ||||||||
Sbjct: 205 tttgaactaacagggtacgatcgagtcatggcttacaagttccatgaggacgaccatggc 264

                                                                       
Query: 65  gaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcactatcca 124
           ||||| ||||| |||||||||||||| |||||||| |||||||  ||||| |||||||| 
Sbjct: 265 gaggtatttgcagagatcacaaagccaggccttgaaccttatcgtggccttcactatccc 324

                                                                      
Query: 125 gccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgat 183
           || || || ||||||||||| ||||| ||||| |||||||||||||| |||||||||||
Sbjct: 325 gcgaccgacatccctcaagctgctagatttctattcatgaagaacaaggtgcggatgat 383



 Score = 46.1 bits (23), Expect = 0.097
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 275 cacagctgtcaccttcagtatatggagaacatgaa 309
           |||||||| ||||| ||||| ||||||||||||||
Sbjct: 475 cacagctgccacctgcagtacatggagaacatgaa 509

---

>gb|AF190078.1|AF190078 Degeneria vitiensis phytochrome A (PHYA) gene, partial cds
          Length = 1242

 Score =  165 bits (83), Expect = 2e-37
 Identities = 155/179 (86%)
 Strand = Plus / Plus

                                                                       
Query: 5   tttgaacttacagggtatgatagggttatggcttacaagttccatgaagataaccatggc 64
           |||||||||||||||||||| ||||  ||||| || ||||||||||||||| | ||||||
Sbjct: 205 tttgaacttacagggtatgacagggcaatggcctataagttccatgaagatgatcatggc 264

                                                                       
Query: 65  gaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcactatcca 124
           |||||| || | ||| |||||||||| ||||| || |||||||| ||  |||||||||||
Sbjct: 265 gaggtcatttcagaggtcacaaagccgggcctggaaccttatctaggtttgcactatcca 324

                                                                      
Query: 125 gccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgat 183
           |||||||| |||||||| ||||| |||||| |||| ||||||||||| || ||||||||
Sbjct: 325 gccactgacatccctcaggcagccaggtttttgtttatgaagaacaaggttcggatgat 383

---

>gb|AF190089.1|AF190089 Idiospermum australiense phytochrome A (PHYA) gene, partial cds
          Length = 1242

 Score =  157 bits (79), Expect = 4e-35
 Identities = 154/179 (86%)
 Strand = Plus / Plus

                                                                       
Query: 5   tttgaacttacagggtatgatagggttatggcttacaagttccatgaagataaccatggc 64
           ||||||||||| |||||||||||||| |||||||| ||||||||||||||| ||||||| 
Sbjct: 205 tttgaacttacggggtatgatagggtgatggcttataagttccatgaagatgaccatggt 264

                                                                       
Query: 65  gaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcactatcca 124
           |||||| |  | || |||||||| |||||||| || |||||||| || ||||| ||||| 
Sbjct: 265 gaggtcatatctgaaatcacaaaacctggcctagaaccttatctgggtctgcattatcct 324

                                                                      
Query: 125 gccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgat 183
           || |||||||| || ||||| || |||||| |||| |||||||||||||| ||||||||
Sbjct: 325 gctactgatattccccaagctgccaggtttttgtttatgaagaacaaagttcggatgat 383

---

>gb|AF190082.1|AF190082 Eupomatia laurina phytochrome A (PHYA) gene, partial cds
          Length = 1176

 Score =  139 bits (70), Expect = 9e-30
 Identities = 154/182 (84%)
 Strand = Plus / Plus

                                                                       
Query: 5   tttgaacttacagggtatgatagggttatggcttacaagttccatgaagataaccatggc 64
           ||||||||||| |||||||| || | |||||| || ||||||||||| ||  | ||||||
Sbjct: 133 tttgaacttactgggtatgacagagctatggcatataagttccatgatgacgatcatggc 192

                                                                       
Query: 65  gaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcactatcca 124
           |||||| |  | |||||||||||||| ||||| ||||||||||| ||  |||| ||||||
Sbjct: 193 gaggtcatatcagagatcacaaagccaggcctagagccttatctgggtttgcattatcca 252

                                                                       
Query: 125 gccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgatt 184
           |||||||| |||||||| || || |||||| |||| ||||||||||| || |||||||||
Sbjct: 253 gccactgacatccctcaggccgccaggtttttgtttatgaagaacaaggtccggatgatt 312

             
Query: 185 tg 186
           ||
Sbjct: 313 tg 314



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 397 gaagaagaagatactatggggccttgttgtttgcca 432
           ||||||||||| ||||||||| |||||||| |||||
Sbjct: 528 gaagaagaagagactatggggtcttgttgtgtgcca 563

---

>gb|U61202.1|FIU61202 Flagellaria indica phytochrome (PHYA) gene, partial cds
          Length = 315

 Score =  127 bits (64), Expect = 3e-26
 Identities = 170/203 (83%), Gaps = 3/203 (1%)
 Strand = Plus / Plus

                                                                       
Query: 239 gatattagcttgtgtggttcatcactcagggcagcacacagctgtcaccttcagtatatg 298
           ||||| ||||| ||||||||  | ||||| ||| |||| || |||||| | |||||||||
Sbjct: 100 gatatcagcttatgtggttcgacgctcagagcaccacatagttgtcacttgcagtatatg 159

                                                                       
Query: 299 gagaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgagagtgaagag 358
           |||||||||||||| ||||||||||||||||||||||||||||| || ||||| | ||||
Sbjct: 160 gagaacatgaactcaattgcatcccttgtcatggctgttgtggtcaacgagagaggagag 219

                                                                       
Query: 359 gacgacgaggccgagtccgaacaaccagcacagcagcagaagaagaagatactatggggc 418
           || || ||| | ||| | |  || || |||  ||||||||||| ||||| | ||||||||
Sbjct: 220 gaagatgagccggagcctgggcagcc-gca--gcagcagaagaggaagagattatggggc 276

                                  
Query: 419 cttgttgtttgccaccatgagag 441
           |||||||| |||||| |||||||
Sbjct: 277 cttgttgtgtgccacaatgagag 299



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 152 tttctgttcatgaagaacaaagtgcggatgat 183
           ||||| |||||||||||||| || ||||||||
Sbjct: 13  tttcttttcatgaagaacaaggtccggatgat 44

---

>gb|AF190094.1|AF190094 Magnolia X soulangeana phytochrome A (PHYA) gene, partial cds
          Length = 1173

 Score =  123 bits (62), Expect = 5e-25
 Identities = 158/190 (83%)
 Strand = Plus / Plus

                                                                       
Query: 1   agtctttgaacttacagggtatgatagggttatggcttacaagttccatgaagataacca 60
           |||||||||||||||||||||||| ||||| ||||| || ||||||||||||||| | ||
Sbjct: 147 agtctttgaacttacagggtatgacagggtgatggcctataagttccatgaagatgatca 206

                                                                       
Query: 61  tggcgaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcacta 120
           |||||| ||| |  | |||||||| ||||| || || || |||||||| ||  |||| ||
Sbjct: 207 tggcgaagtcatatcagagatcacgaagccaggtctagaaccttatctgggtttgcatta 266

                                                                       
Query: 121 tccagccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggat 180
           ||| ||||| || |||||||| || || |||||| |||| ||||||||||| || || ||
Sbjct: 267 tccggccacggacatccctcaggctgccaggtttttgtttatgaagaacaaggtccgaat 326

                     
Query: 181 gatttgcgat 190
           ||| ||||||
Sbjct: 327 gatctgcgat 336

---

>gb|AF276714.1|AF276714 Asparagus falcatus phytochrome A (PHYA) gene, partial cds
          Length = 1662

 Score =  121 bits (61), Expect = 2e-24
 Identities = 115/133 (86%)
 Strand = Plus / Plus

                                                                       
Query: 57  accatggcgaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgc 116
           |||| |||||||||||  ||||| |||| ||||||||||| |||||||| ||||||||||
Sbjct: 185 accacggcgaggtcttctccgaggtcacgaagcctggcctcgagccttacctcggcctgc 244

                                                                       
Query: 117 actatccagccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgc 176
           |||| || ||||| || |||||||| ||||| ||||| || |||||||||| |||||| |
Sbjct: 245 actacccggccaccgacatccctcaggcagccaggttcctcttcatgaagagcaaagttc 304

                        
Query: 177 ggatgatttgcga 189
           ||||||| |||||
Sbjct: 305 ggatgatctgcga 317



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                       
Query: 275 cacagctgtcaccttcagtatatggagaacatgaactcgattgcatcccttgtcatggct 334
           ||||| || ||||| ||||| |||||||||||||| ||||| || ||||| |||||||| 
Sbjct: 403 cacagttgccacctgcagtacatggagaacatgaattcgatcgcgtccctggtcatggcg 462

                   
Query: 335 gttgtggt 342
           || |||||
Sbjct: 463 gtggtggt 470

---

>gb|AF276747.1|AF276747 Tacca chantieri phytochrome A (PHYA) gene, partial cds
          Length = 1400

 Score =  117 bits (59), Expect = 3e-23
 Identities = 143/171 (83%)
 Strand = Plus / Plus

                                                                       
Query: 1   agtctttgaacttacagggtatgatagggttatggcttacaagttccatgaagataacca 60
           ||||||||| || || |||||||| ||||| ||||  || || |||||||||||| | ||
Sbjct: 201 agtctttgagctcactgggtatgacagggtgatggtctataaattccatgaagatgatca 260

                                                                       
Query: 61  tggcgaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcacta 120
           ||| ||||| |||   |||||||||||||| || |||||||||||||  |||||||| ||
Sbjct: 261 tggagaggtttttcgtgagatcacaaagcccggtcttgagccttatcagggcctgcatta 320

                                                              
Query: 121 tccagccactgatatccctcaagcagctaggtttctgttcatgaagaacaa 171
           |||||| ||||||||||| || || || || ||||| ||||||||||||||
Sbjct: 321 tccagctactgatatcccgcaggctgccagatttcttttcatgaagaacaa 371



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 51/58 (87%)
 Strand = Plus / Plus

                                                                     
Query: 387 cacagcagcagaagaagaagatactatggggccttgttgtttgccaccatgagagccc 444
           |||||||||| ||||| ||||  || ||||| |||||||||||||| |||||||||||
Sbjct: 587 cacagcagcaaaagaaaaagaggctttgggggcttgttgtttgccatcatgagagccc 644



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 62/76 (81%)
 Strand = Plus / Plus

                                                                       
Query: 273 cacacagctgtcaccttcagtatatggagaacatgaactcgattgcatcccttgtcatgg 332
           ||||||| || ||||| || || |||||||||||||| || ||||| || || || ||||
Sbjct: 473 cacacagttgccacctgcaatacatggagaacatgaattccattgcttcactggttatgg 532

                           
Query: 333 ctgttgtggttaatga 348
           |||  ||||| |||||
Sbjct: 533 ctgaggtggtgaatga 548

---

>gb|U61187.1|BSU61187 Bambusa sp. Kellogg V6 phytochrome (PHYA) gene, partial cds
          Length = 126

 Score =  111 bits (56), Expect = 2e-21
 Identities = 98/112 (87%)
 Strand = Plus / Plus

                                                                       
Query: 334 tgttgtggttaatgagagtgaagaggacgacgaggccgagtccgaacaaccagcacagca 393
           |||||||| |||||||| ||||||||| || || | |||| | |||||||||||||| ||
Sbjct: 3   tgttgtggataatgagaatgaagaggatgatgaagtcgaggctgaacaaccagcacaaca 62

                                                               
Query: 394 gcagaagaagaagatactatggggccttgttgtttgccaccatgagagcccc 445
           |||||||| ||| |  |||||||||||| |||||||||||||||||||||||
Sbjct: 63  gcagaagaggaaaaagctatggggccttattgtttgccaccatgagagcccc 114

---

>gb|AF276734.1|AF276734 Pachysandra americana phytochrome A (PHYA) gene, partial cds
          Length = 1395

 Score =  111 bits (56), Expect = 2e-21
 Identities = 146/176 (82%)
 Strand = Plus / Plus

                                                                       
Query: 8   gaacttacagggtatgatagggttatggcttacaagttccatgaagataaccatggcgag 67
           ||||| ||||||||||| ||||| ||||| || || || ||||| ||| | ||||| || 
Sbjct: 208 gaactcacagggtatgacagggtgatggcctataaatttcatgaggatgatcatggtgaa 267

                                                                       
Query: 68  gtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcactatccagcc 127
           ||  |  |||||||||||||||| ||||||||||||||||| || ||||| |||||||||
Sbjct: 268 gttgtgtccgagatcacaaagccaggccttgagccttatctgggtctgcattatccagcc 327

                                                                   
Query: 128 actgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgat 183
           ||||| |||||||| || ||  | || ||||||||||| |||||||| || |||||
Sbjct: 328 actgacatccctcaggctgcacgtttcctgttcatgaaaaacaaagttcgtatgat 383



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                       
Query: 247 cttgtgtggttcatcactcagggcagcacacagctgtcaccttcagtatatggagaacat 306
           ||||||||| ||| |||| |||||  |||||||||| ||| | ||||||||||| |||||
Sbjct: 447 cttgtgtgggtcaacactaagggctccacacagctgccacttacagtatatggacaacat 506

            
Query: 307 g 307
           |
Sbjct: 507 g 507

---

>ref|NM_100828.2| Arabidopsis thaliana PHYA (PHYTOCHROME A); G-protein coupled
            photoreceptor/ signal transducer AT1G09570 (PHYA) mRNA,
            complete cds
          Length = 3797

 Score =  109 bits (55), Expect = 8e-21
 Identities = 148/179 (82%)
 Strand = Plus / Plus

                                                                        
Query: 5    tttgaacttacagggtatgatagggttatggcttacaagttccatgaagataaccatggc 64
            |||||||| || |||||||| ||||| |||||||| ||||| ||||||||| | || || 
Sbjct: 877  tttgaactcacggggtatgacagggtgatggcttataagtttcatgaagatgatcacggt 936

                                                                        
Query: 65   gaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcactatcca 124
            |||||  |  ||||| | ||||| ||||| || ||||||||||| || ||||| ||||| 
Sbjct: 937  gaggttgtctccgaggttacaaaacctgggctggagccttatcttgggctgcattatcct 996

                                                                       
Query: 125  gccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgat 183
            ||||| || ||||||||||||||  | |||||||| ||||||||||| || ||||||||
Sbjct: 997  gccaccgacatccctcaagcagcccgttttctgtttatgaagaacaaggtccggatgat 1055

---

>gb|AC003970.1| Arabidopsis thaliana chromosome I BAC F14J9 genomic sequence contains
             phyA marker, complete sequence
          Length = 95865

 Score =  109 bits (55), Expect = 8e-21
 Identities = 148/179 (82%)
 Strand = Plus / Minus

                                                                         
Query: 5     tttgaacttacagggtatgatagggttatggcttacaagttccatgaagataaccatggc 64
             |||||||| || |||||||| ||||| |||||||| ||||| ||||||||| | || || 
Sbjct: 80129 tttgaactcacggggtatgacagggtgatggcttataagtttcatgaagatgatcacggt 80070

                                                                         
Query: 65    gaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcactatcca 124
             |||||  |  ||||| | ||||| ||||| || ||||||||||| || ||||| ||||| 
Sbjct: 80069 gaggttgtctccgaggttacaaaacctgggctggagccttatcttgggctgcattatcct 80010

                                                                        
Query: 125   gccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgat 183
             ||||| || ||||||||||||||  | |||||||| ||||||||||| || ||||||||
Sbjct: 80009 gccaccgacatccctcaagcagcccgttttctgtttatgaagaacaaggtccggatgat 79951

---

>gb|AY039520.1| Arabidopsis thaliana At1g09570/F14J9_27 mRNA, complete cds
          Length = 3696

 Score =  109 bits (55), Expect = 8e-21
 Identities = 148/179 (82%)
 Strand = Plus / Plus

                                                                       
Query: 5   tttgaacttacagggtatgatagggttatggcttacaagttccatgaagataaccatggc 64
           |||||||| || |||||||| ||||| |||||||| ||||| ||||||||| | || || 
Sbjct: 818 tttgaactcacggggtatgacagggtgatggcttataagtttcatgaagatgatcacggt 877

                                                                       
Query: 65  gaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcactatcca 124
           |||||  |  ||||| | ||||| ||||| || ||||||||||| || ||||| ||||| 
Sbjct: 878 gaggttgtctccgaggttacaaaacctgggctggagccttatcttgggctgcattatcct 937

                                                                      
Query: 125 gccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgat 183
           ||||| || ||||||||||||||  | |||||||| ||||||||||| || ||||||||
Sbjct: 938 gccaccgacatccctcaagcagcccgttttctgtttatgaagaacaaggtccggatgat 996

---

>gb|AF276722.1|AF276722 Hedyosmum sp. SM-2000 phytochrome A (PHYA) gene, partial cds
          Length = 1398

 Score =  109 bits (55), Expect = 8e-21
 Identities = 148/179 (82%)
 Strand = Plus / Plus

                                                                       
Query: 5   tttgaacttacagggtatgatagggttatggcttacaagttccatgaagataaccatggc 64
           ||||||||||| || || |||||||| ||||| || ||||| || |||||| | ||||| 
Sbjct: 205 tttgaacttacgggttacgatagggtgatggcctataagtttcacgaagatgatcatggg 264

                                                                       
Query: 65  gaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcactatcca 124
           ||||||||  | || || |||||||||||||| || |||||| | ||  |||| ||||||
Sbjct: 265 gaggtcttctcagaaattacaaagcctggcctggaaccttatttgggtttgcattatcca 324

                                                                      
Query: 125 gccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgat 183
           || || ||||| || ||||||||||| |||||||||||||| ||||| || ||||||||
Sbjct: 325 gcgacagatattccccaagcagctagatttctgttcatgaaaaacaaggttcggatgat 383

---

>emb|X17341.1|ATPHYA Arabidopsis thaliana phyA mRNA for phytochrome
          Length = 3735

 Score =  109 bits (55), Expect = 8e-21
 Identities = 148/179 (82%)
 Strand = Plus / Plus

                                                                        
Query: 5    tttgaacttacagggtatgatagggttatggcttacaagttccatgaagataaccatggc 64
            |||||||| || |||||||| ||||| |||||||| ||||| ||||||||| | || || 
Sbjct: 877  tttgaactcacggggtatgacagggtgatggcttataagtttcatgaagatgatcacggt 936

                                                                        
Query: 65   gaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcactatcca 124
            |||||  |  ||||| | ||||| ||||| || ||||||||||| || ||||| ||||| 
Sbjct: 937  gaggttgtctccgaggttacaaaacctgggctggagccttatcttgggctgcattatcct 996

                                                                       
Query: 125  gccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgat 183
            ||||| || ||||||||||||||  | |||||||| ||||||||||| || ||||||||
Sbjct: 997  gccaccgacatccctcaagcagcccgttttctgtttatgaagaacaaggtccggatgat 1055

---

>gb|L21154.1|ATHPHYTOA Arabidopsis thaliana phytochrome A (phyA) gene exons 1-5, complete
            cds
          Length = 7277

 Score =  109 bits (55), Expect = 8e-21
 Identities = 148/179 (82%)
 Strand = Plus / Plus

                                                                        
Query: 5    tttgaacttacagggtatgatagggttatggcttacaagttccatgaagataaccatggc 64
            |||||||| || |||||||| ||||| |||||||| ||||| ||||||||| | || || 
Sbjct: 3620 tttgaactcacggggtatgacagggtgatggcttataagtttcatgaagatgatcacggt 3679

                                                                        
Query: 65   gaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcactatcca 124
            |||||  |  ||||| | ||||| ||||| || ||||||||||| || ||||| ||||| 
Sbjct: 3680 gaggttgtctccgaggttacaaaacctgggctggagccttatcttgggctgcattatcct 3739

                                                                       
Query: 125  gccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgat 183
            ||||| || ||||||||||||||  | |||||||| ||||||||||| || ||||||||
Sbjct: 3740 gccaccgacatccctcaagcagcccgttttctgtttatgaagaacaaggtccggatgat 3798

---

>gb|AF190064.1|AF190064 Annona sp. SM-1999 phytochrome A (PHYA) gene, partial cds
          Length = 1176

 Score =  107 bits (54), Expect = 3e-20
 Identities = 150/182 (82%)
 Strand = Plus / Plus

                                                                       
Query: 5   tttgaacttacagggtatgatagggttatggcttacaagttccatgaagataaccatggc 64
           ||||||||||| |||||||| ||||  |||||||| ||||||||||| ||| | ||||| 
Sbjct: 133 tttgaacttactgggtatgacagggcaatggcttataagttccatgatgatgatcatggg 192

                                                                       
Query: 65  gaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcactatcca 124
           || ||| |  | || ||||||||||| ||||| ||||||||||| ||  |||| || |||
Sbjct: 193 gaagtcatatcagaaatcacaaagccaggcctagagccttatctgggtttgcattaccca 252

                                                                       
Query: 125 gccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgatt 184
           |||||||| |||||||| || || || ||  |||||||||||||||| || || ||||||
Sbjct: 253 gccactgacatccctcaggctgccagattcttgttcatgaagaacaaggtccgaatgatt 312

             
Query: 185 tg 186
           ||
Sbjct: 313 tg 314

---

>emb|AM233982.1| Melampyrum sylvaticum partial phya gene for phytochrome A, clone
           1595_8_2
          Length = 1146

 Score =  107 bits (54), Expect = 3e-20
 Identities = 153/186 (82%)
 Strand = Plus / Plus

                                                                       
Query: 5   tttgaacttacagggtatgatagggttatggcttacaagttccatgaagataaccatggc 64
           |||||||| || || ||||| ||||| ||| | || ||||| || |||||| | ||||| 
Sbjct: 133 tttgaactcactggttatgacagggtgatgacatataagtttcacgaagatgatcatgga 192

                                                                       
Query: 65  gaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcactatcca 124
           ||||| ||  | ||||||||||| || ||||||||||||||| | ||| |||| ||||||
Sbjct: 193 gaggttttcactgagatcacaaaaccgggccttgagccttatttgggcttgcattatcca 252

                                                                       
Query: 125 gccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgatt 184
           || || |||||||| ||||||||| | || ||||| |||||||| |||||| ||||||| 
Sbjct: 253 gctacagatatcccacaagcagctcgtttcctgtttatgaagaataaagtgaggatgata 312

                 
Query: 185 tgcgat 190
           ||||||
Sbjct: 313 tgcgat 318



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 60/71 (84%)
 Strand = Plus / Plus

                                                                       
Query: 290 cagtatatggagaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgag 349
           ||||| ||||||||||||||||||||||| || || || ||| |||| ||||| || |||
Sbjct: 418 cagtacatggagaacatgaactcgattgcgtctctggttatgtctgtggtggtcaacgag 477

                      
Query: 350 agtgaagagga 360
            |||| |||||
Sbjct: 478 ggtgatgagga 488

---

>emb|AM233980.1| Melampyrum nemorosum partial phya gene for phytochrome A, clone
           1571_2b_1
          Length = 1167

 Score =  107 bits (54), Expect = 3e-20
 Identities = 153/186 (82%)
 Strand = Plus / Plus

                                                                       
Query: 5   tttgaacttacagggtatgatagggttatggcttacaagttccatgaagataaccatggc 64
           |||||||| || || ||||| ||||| ||| | || ||||| || |||||| | ||||| 
Sbjct: 151 tttgaactcactggttatgacagggtgatgacatataagtttcacgaagatgatcatgga 210

                                                                       
Query: 65  gaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcactatcca 124
           ||||| ||  | ||||||||||| || ||||||||||||||| | ||| |||| ||||||
Sbjct: 211 gaggttttcactgagatcacaaaaccgggccttgagccttatgtgggcttgcattatcca 270

                                                                       
Query: 125 gccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgatt 184
           || || |||||||| ||||||||| | || ||||| |||||||| |||||| ||||||| 
Sbjct: 271 gctacagatatcccacaagcagctcgtttcctgtttatgaagaataaagtgaggatgata 330

                 
Query: 185 tgcgat 190
           ||||||
Sbjct: 331 tgcgat 336



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 290 cagtatatggagaacatgaactcgattgc 318
           ||||| |||||||||||||||||||||||
Sbjct: 436 cagtacatggagaacatgaactcgattgc 464

---

>ref|XM_469781.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3681

 Score =  105 bits (53), Expect = 1e-19
 Identities = 83/93 (89%)
 Strand = Plus / Plus

                                                                       
Query: 98  gagccttatctcggcctgcactatccagccactgatatccctcaagcagctaggtttctg 157
           ||||| ||||| ||||||||||| ||||||||||| || ||||| ||| | |||||| ||
Sbjct: 781 gagccgtatcttggcctgcactacccagccactgacattcctcaggcatccaggtttttg 840

                                            
Query: 158 ttcatgaagaacaaagtgcggatgatttgcgat 190
           |||||||||||||||||||||||||| ||||||
Sbjct: 841 ttcatgaagaacaaagtgcggatgatatgcgat 873



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 20  tatgatagggttatggcttacaagttccatgaagataaccatggcgaggt 69
           ||||| ||||| ||||| |||||||||||||| ||| | ||||| |||||
Sbjct: 703 tatgacagggtgatggcgtacaagttccatgaggatgagcatggtgaggt 752

---

>gb|AF377947.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone
             OSJNBa0032E21, complete sequence
          Length = 137580

 Score =  105 bits (53), Expect = 1e-19
 Identities = 83/93 (89%)
 Strand = Plus / Minus

                                                                         
Query: 98    gagccttatctcggcctgcactatccagccactgatatccctcaagcagctaggtttctg 157
             ||||| ||||| ||||||||||| ||||||||||| || ||||| ||| | |||||| ||
Sbjct: 90444 gagccgtatcttggcctgcactacccagccactgacattcctcaggcatccaggtttttg 90385

                                              
Query: 158   ttcatgaagaacaaagtgcggatgatttgcgat 190
             |||||||||||||||||||||||||| ||||||
Sbjct: 90384 ttcatgaagaacaaagtgcggatgatatgcgat 90352



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                               
Query: 20    tatgatagggttatggcttacaagttccatgaagataaccatggcgaggt 69
             ||||| ||||| ||||| |||||||||||||| ||| | ||||| |||||
Sbjct: 90522 tatgacagggtgatggcgtacaagttccatgaggatgagcatggtgaggt 90473

---

>gb|AC092556.8| Oryza sativa chromosome 3 BAC OSJNBa0047E24 genomic sequence, complete
             sequence
          Length = 157970

 Score =  105 bits (53), Expect = 1e-19
 Identities = 83/93 (89%)
 Strand = Plus / Minus

                                                                         
Query: 98    gagccttatctcggcctgcactatccagccactgatatccctcaagcagctaggtttctg 157
             ||||| ||||| ||||||||||| ||||||||||| || ||||| ||| | |||||| ||
Sbjct: 49051 gagccgtatcttggcctgcactacccagccactgacattcctcaggcatccaggtttttg 48992

                                              
Query: 158   ttcatgaagaacaaagtgcggatgatttgcgat 190
             |||||||||||||||||||||||||| ||||||
Sbjct: 48991 ttcatgaagaacaaagtgcggatgatatgcgat 48959



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                               
Query: 20    tatgatagggttatggcttacaagttccatgaagataaccatggcgaggt 69
             ||||| ||||| ||||| |||||||||||||| ||| | ||||| |||||
Sbjct: 49129 tatgacagggtgatggcgtacaagttccatgaggatgagcatggtgaggt 49080

---

>gb|AC135225.4| Oryza sativa chromosome 3 BAC OJ1112_G08 genomic sequence, complete
             sequence
          Length = 128294

 Score =  105 bits (53), Expect = 1e-19
 Identities = 83/93 (89%)
 Strand = Plus / Plus

                                                                         
Query: 98    gagccttatctcggcctgcactatccagccactgatatccctcaagcagctaggtttctg 157
             ||||| ||||| ||||||||||| ||||||||||| || ||||| ||| | |||||| ||
Sbjct: 22040 gagccgtatcttggcctgcactacccagccactgacattcctcaggcatccaggtttttg 22099

                                              
Query: 158   ttcatgaagaacaaagtgcggatgatttgcgat 190
             |||||||||||||||||||||||||| ||||||
Sbjct: 22100 ttcatgaagaacaaagtgcggatgatatgcgat 22132



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                               
Query: 20    tatgatagggttatggcttacaagttccatgaagataaccatggcgaggt 69
             ||||| ||||| ||||| |||||||||||||| ||| | ||||| |||||
Sbjct: 21962 tatgacagggtgatggcgtacaagttccatgaggatgagcatggtgaggt 22011

---

>dbj|AB018442.1| Oryza sativa (japonica cultivar-group) mRNA for phytochrome C,
            complete cds
          Length = 3980

 Score =  105 bits (53), Expect = 1e-19
 Identities = 83/93 (89%)
 Strand = Plus / Plus

                                                                        
Query: 98   gagccttatctcggcctgcactatccagccactgatatccctcaagcagctaggtttctg 157
            ||||| ||||| ||||||||||| ||||||||||| || ||||| ||| | |||||| ||
Sbjct: 1080 gagccgtatcttggcctgcactacccagccactgacattcctcaggcatccaggtttttg 1139

                                             
Query: 158  ttcatgaagaacaaagtgcggatgatttgcgat 190
            |||||||||||||||||||||||||| ||||||
Sbjct: 1140 ttcatgaagaacaaagtgcggatgatatgcgat 1172



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                              
Query: 20   tatgatagggttatggcttacaagttccatgaagataaccatggcgaggt 69
            ||||| ||||| ||||| |||||||||||||| ||| | ||||| |||||
Sbjct: 1002 tatgacagggtgatggcgtacaagttccatgaggatgagcatggtgaggt 1051

---

>gb|AF141942.1|AF141942 Oryza sativa phytochrome C (phyC) gene, complete cds
          Length = 6755

 Score =  105 bits (53), Expect = 1e-19
 Identities = 83/93 (89%)
 Strand = Plus / Plus

                                                                        
Query: 98   gagccttatctcggcctgcactatccagccactgatatccctcaagcagctaggtttctg 157
            ||||| ||||| ||||||||||| ||||||||||| || ||||| ||| | |||||| ||
Sbjct: 1816 gagccgtatcttggcctgcactacccagccactgacattcctcaggcatccaggtttttg 1875

                                             
Query: 158  ttcatgaagaacaaagtgcggatgatttgcgat 190
            |||||||||||||||||||||||||| ||||||
Sbjct: 1876 ttcatgaagaacaaagtgcggatgatatgcgat 1908



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                              
Query: 20   tatgatagggttatggcttacaagttccatgaagataaccatggcgaggt 69
            ||||| ||||| ||||| |||||||||||||| ||| | ||||| |||||
Sbjct: 1738 tatgacagggtgatggcgtacaagttccatgaggatgagcatggtgaggt 1787

---

>gb|DQ201146.1| Hordeum vulgare subsp. vulgare cultivar Kompolti korai phytochrome C
            (PhyC) gene, complete cds
          Length = 4914

 Score =  103 bits (52), Expect = 5e-19
 Identities = 136/164 (82%)
 Strand = Plus / Plus

                                                                        
Query: 20   tatgatagggttatggcttacaagttccatgaagataaccatggcgaggtctttgccgag 79
            ||||| ||||| ||||| |||||||||||||| ||| | ||||| |||||| ||||||||
Sbjct: 889  tatgacagggtgatggcatacaagttccatgaggatgagcatggtgaggtcattgccgag 948

                                                                        
Query: 80   atcacaaagcctggccttgagccttatctcggcctgcactatccagccactgatatccct 139
              ||  | | |||   | ||||| ||||| ||||||||||| || || ||||| ||||| 
Sbjct: 949  tgcaggaggtctgatttggagccgtatcttggcctgcactacccggcaactgacatccca 1008

                                                        
Query: 140  caagcagctaggtttctgttcatgaagaacaaagtgcggatgat 183
            |||||| | |||||||||||||||||||| ||||||||||||||
Sbjct: 1009 caagcatccaggtttctgttcatgaagaataaagtgcggatgat 1052

---

>gb|DQ238106.1| Hordeum vulgare subsp. vulgare cv. Morex phytochrome C (PhyC) gene,
            complete cds
          Length = 4938

 Score =  103 bits (52), Expect = 5e-19
 Identities = 136/164 (82%)
 Strand = Plus / Plus

                                                                        
Query: 20   tatgatagggttatggcttacaagttccatgaagataaccatggcgaggtctttgccgag 79
            ||||| ||||| ||||| |||||||||||||| ||| | ||||| |||||| ||||||||
Sbjct: 889  tatgacagggtgatggcatacaagttccatgaggatgagcatggtgaggtcattgccgag 948

                                                                        
Query: 80   atcacaaagcctggccttgagccttatctcggcctgcactatccagccactgatatccct 139
              ||  | | |||   | ||||| ||||| ||||||||||| || || ||||| ||||| 
Sbjct: 949  tgcaggaggtctgatttggagccgtatcttggcctgcactacccggcaactgacatccca 1008

                                                        
Query: 140  caagcagctaggtttctgttcatgaagaacaaagtgcggatgat 183
            |||||| | |||||||||||||||||||| ||||||||||||||
Sbjct: 1009 caagcatccaggtttctgttcatgaagaataaagtgcggatgat 1052

---

>gb|DQ201145.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo phytochrome C (PhyC)
            gene, complete cds
          Length = 4914

 Score =  103 bits (52), Expect = 5e-19
 Identities = 136/164 (82%)
 Strand = Plus / Plus

                                                                        
Query: 20   tatgatagggttatggcttacaagttccatgaagataaccatggcgaggtctttgccgag 79
            ||||| ||||| ||||| |||||||||||||| ||| | ||||| |||||| ||||||||
Sbjct: 889  tatgacagggtgatggcatacaagttccatgaggatgagcatggtgaggtcattgccgag 948

                                                                        
Query: 80   atcacaaagcctggccttgagccttatctcggcctgcactatccagccactgatatccct 139
              ||  | | |||   | ||||| ||||| ||||||||||| || || ||||| ||||| 
Sbjct: 949  tgcaggaggtctgatttggagccgtatcttggcctgcactacccggcaactgacatccca 1008

                                                        
Query: 140  caagcagctaggtttctgttcatgaagaacaaagtgcggatgat 183
            |||||| | |||||||||||||||||||| ||||||||||||||
Sbjct: 1009 caagcatccaggtttctgttcatgaagaataaagtgcggatgat 1052

---

>gb|AF276741.1|AF276741 Sarcandra glabra phytochrome A (PHYA) gene, partial cds
          Length = 1392

 Score =  103 bits (52), Expect = 5e-19
 Identities = 136/164 (82%)
 Strand = Plus / Plus

                                                                       
Query: 20  tatgatagggttatggcttacaagttccatgaagataaccatggcgaggtctttgccgag 79
           |||||||||||||||||||| ||||| || |||||| | ||||| |||||| |  | |  
Sbjct: 220 tatgatagggttatggcttataagtttcacgaagatgatcatggggaggtcatctcagca 279

                                                                       
Query: 80  atcacaaagcctggccttgagccttatctcggcctgcactatccagccactgatatccct 139
           || |||||||||||||| || |||||| | || || || ||||| ||||| ||||| || 
Sbjct: 280 attacaaagcctggcctggaaccttatttgggtctacattatccggccacggatataccc 339

                                                       
Query: 140 caagcagctaggtttctgttcatgaagaacaaagtgcggatgat 183
           ||||| ||||||||| |||||||||||||||| || ||||||||
Sbjct: 340 caagctgctaggtttttgttcatgaagaacaaggttcggatgat 383

---

>gb|U78835.1|SAU78835 Sophora affinis phytochrome A (PHYA) gene, partial cds
          Length = 630

 Score =  103 bits (52), Expect = 5e-19
 Identities = 127/152 (83%)
 Strand = Plus / Plus

                                                                       
Query: 20  tatgatagggttatggcttacaagttccatgaagataaccatggcgaggtctttgccgag 79
           ||||| ||||| |||||||| ||||| ||||| ||| | ||||| |||||  |||| |||
Sbjct: 1   tatgacagggtgatggcttataagtttcatgaggatgatcatggggaggtgattgctgag 60

                                                                       
Query: 80  atcacaaagcctggccttgagccttatctcggcctgcactatccagccactgatatccct 139
           || |||||||| ||||| ||||||||||| ||  | ||||||||||||||||||||||| 
Sbjct: 61  ataacaaagccaggcctagagccttatcttggtttacactatccagccactgatatcccc 120

                                           
Query: 140 caagcagctaggtttctgttcatgaagaacaa 171
           || || || |||||| | || |||||||||||
Sbjct: 121 caggctgcaaggtttttatttatgaagaacaa 152

---

>emb|AM233923.1| Ajuga reptans partial phya gene for phytochrome A, clone 1513_11_1
          Length = 1824

 Score =  101 bits (51), Expect = 2e-18
 Identities = 111/131 (84%)
 Strand = Plus / Plus

                                                                       
Query: 41  aagttccatgaagataaccatggcgaggtctttgccgagatcacaaagcctggccttgag 100
           ||||||||||| ||| | || || ||||| || || ||| |||||||||| | |||||||
Sbjct: 241 aagttccatgatgatgatcacggggaggtgttcgctgaggtcacaaagccggaccttgag 300

                                                                       
Query: 101 ccttatctcggcctgcactatccagccactgatatccctcaagcagctaggtttctgttc 160
           |||||| |||||||||| ||||| || || ||||| ||||| || ||| |||||||||||
Sbjct: 301 ccttatgtcggcctgcattatcctgctacggatattcctcaggctgctcggtttctgttc 360

                      
Query: 161 atgaagaacaa 171
           |||||||||||
Sbjct: 361 atgaagaacaa 371



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 290 cagtatatggagaacatgaactcgattgc 318
           ||||| |||||||| ||||||||||||||
Sbjct: 490 cagtacatggagaatatgaactcgattgc 518

---

>emb|AM233963.1| Glechoma hederacea partial phya gene for phytochrome A, clone
           1513_12_1
          Length = 1821

 Score =  101 bits (51), Expect = 2e-18
 Identities = 120/143 (83%)
 Strand = Plus / Plus

                                                                       
Query: 41  aagttccatgaagataaccatggcgaggtctttgccgagatcacaaagcctggccttgag 100
           ||||| ||||||||| | ||||| ||||| ||| |||||||||  ||||||||||| || 
Sbjct: 241 aagtttcatgaagatgatcatggtgaggtgtttaccgagatcaggaagcctggcctcgaa 300

                                                                       
Query: 101 ccttatctcggcctgcactatccagccactgatatccctcaagcagctaggtttctgttc 160
           |||||| | ||| |||| ||||| || || ||||| |||||||| ||| ||||| |||||
Sbjct: 301 ccttatgtgggcttgcattatcctgctacggatatacctcaagctgctcggtttttgttc 360

                                  
Query: 161 atgaagaacaaagtgcggatgat 183
           ||||||||||| || ||||||||
Sbjct: 361 atgaagaacaaggtccggatgat 383

---

>dbj|AB036764.1| Armoracia rusticana ArPHYA23 mRNA for phytochrome A, complete cds
          Length = 3810

 Score =  101 bits (51), Expect = 2e-18
 Identities = 147/179 (82%)
 Strand = Plus / Plus

                                                                        
Query: 5    tttgaacttacagggtatgatagggttatggcttacaagttccatgaagataaccatggc 64
            |||||||| || |||||||| ||||| |||||||| ||||| ||||||||| | || || 
Sbjct: 886  tttgaactcacggggtatgacagggtgatggcttataagtttcatgaagatgatcacggt 945

                                                                        
Query: 65   gaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcactatcca 124
            |||||  |  | ||| | ||||| ||||| || ||||| ||||| || ||||| ||||||
Sbjct: 946  gaggtagtctctgaggttacaaaacctggactagagccatatcttgggctgcattatcca 1005

                                                                       
Query: 125  gccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgat 183
            ||||| || ||||||||||||||  | |||||||| ||||||||||| || ||||||||
Sbjct: 1006 gccaccgacatccctcaagcagcccgttttctgtttatgaagaacaaggttcggatgat 1064

---

>dbj|AB036762.1| Armoracia rusticana phyA mRNA for phytochrome A, complete cds
          Length = 3919

 Score =  101 bits (51), Expect = 2e-18
 Identities = 147/179 (82%)
 Strand = Plus / Plus

                                                                        
Query: 5    tttgaacttacagggtatgatagggttatggcttacaagttccatgaagataaccatggc 64
            |||||||| ||||||||||| ||||| |||||||| ||||| ||||||||| | || || 
Sbjct: 986  tttgaactcacagggtatgacagggtgatggcttataagtttcatgaagatgatcacggt 1045

                                                                        
Query: 65   gaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcactatcca 124
            |||||  |  | ||| | ||||| |||||  | ||||| ||||| || ||||| ||||||
Sbjct: 1046 gaggtagtctctgaggttacaaaacctggaatggagccatatcttggactgcattatcca 1105

                                                                       
Query: 125  gccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgat 183
            ||||| || ||||||||||||||  | |||||||| ||||||||||| || ||||||||
Sbjct: 1106 gccaccgacatccctcaagcagcccgttttctgtttatgaagaacaaggtccggatgat 1164

---

>gb|U78841.1|ABU78841 Austrosteensia blackii phytochrome A (PHYA) gene, partial cds
          Length = 627

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 97/113 (85%)
 Strand = Plus / Plus

                                                                       
Query: 23  gatagggttatggcttacaagttccatgaagataaccatggcgaggtctttgccgagatc 82
           |||||||||||||| ||||| || ||||| ||| | ||||| |||||  |||| ||||| 
Sbjct: 1   gatagggttatggcgtacaaatttcatgaggatgatcatggggaggtgattgctgagata 60

                                                                
Query: 83  acaaagcctggccttgagccttatctcggcctgcactatccagccactgatat 135
           |||||||| ||||||||||| ||||| ||  ||||||||||||||||||||||
Sbjct: 61  acaaagccgggccttgagccatatctaggtttgcactatccagccactgatat 113

---

>gb|AY672998.1| Triticum aestivum cultivar Soleil putative non-LTR retroelement and
            Tourist MITE, complete sequence; and phytochrome C
            (PhyC-5A) gene, complete cds
          Length = 9533

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 135/164 (82%)
 Strand = Plus / Plus

                                                                        
Query: 20   tatgatagggttatggcttacaagttccatgaagataaccatggcgaggtctttgccgag 79
            ||||| ||||| ||||| |||||||||||||| ||  | ||||| |||||| ||||||||
Sbjct: 6007 tatgacagggtgatggcatacaagttccatgaggacgagcatggtgaggtcattgccgag 6066

                                                                        
Query: 80   atcacaaagcctggccttgagccttatctcggcctgcactatccagccactgatatccct 139
              ||  | | |||   | ||||| ||||| ||||||||||| || || ||||| ||||| 
Sbjct: 6067 tgcaggaggtctgatttggagccgtatcttggcctgcactacccggcaactgacatccca 6126

                                                        
Query: 140  caagcagctaggtttctgttcatgaagaacaaagtgcggatgat 183
            |||||| | ||||||||||| |||||||||||||||||||||||
Sbjct: 6127 caagcatccaggtttctgtttatgaagaacaaagtgcggatgat 6170

---

>gb|AY672997.1| Triticum aestivum cultivar Saitama 27 Tourist MITE, complete
            sequence; and phytochrome C (PhyC-5A) gene, complete cds
          Length = 5515

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 135/164 (82%)
 Strand = Plus / Plus

                                                                        
Query: 20   tatgatagggttatggcttacaagttccatgaagataaccatggcgaggtctttgccgag 79
            ||||| ||||| ||||| |||||||||||||| ||  | ||||| |||||| ||||||||
Sbjct: 1996 tatgacagggtgatggcatacaagttccatgaggacgagcatggtgaggtcattgccgag 2055

                                                                        
Query: 80   atcacaaagcctggccttgagccttatctcggcctgcactatccagccactgatatccct 139
              ||  | | |||   | ||||| ||||| ||||||||||| || || ||||| ||||| 
Sbjct: 2056 tgcaggaggtctgatttggagccgtatcttggcctgcactacccggcaactgacatccca 2115

                                                        
Query: 140  caagcagctaggtttctgttcatgaagaacaaagtgcggatgat 183
            |||||| | ||||||||||| |||||||||||||||||||||||
Sbjct: 2116 caagcatccaggtttctgtttatgaagaacaaagtgcggatgat 2159

---

>gb|AY672996.1| Triticum aestivum cultivar Reward Tourist MITE, complete sequence;
            and phytochrome C (PhyC-5A) gene, complete cds
          Length = 5516

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 135/164 (82%)
 Strand = Plus / Plus

                                                                        
Query: 20   tatgatagggttatggcttacaagttccatgaagataaccatggcgaggtctttgccgag 79
            ||||| ||||| ||||| |||||||||||||| ||  | ||||| |||||| ||||||||
Sbjct: 1996 tatgacagggtgatggcatacaagttccatgaggacgagcatggtgaggtcattgccgag 2055

                                                                        
Query: 80   atcacaaagcctggccttgagccttatctcggcctgcactatccagccactgatatccct 139
              ||  | | |||   | ||||| ||||| ||||||||||| || || ||||| ||||| 
Sbjct: 2056 tgcaggaggtctgatttggagccgtatcttggcctgcactacccggcaactgacatccca 2115

                                                        
Query: 140  caagcagctaggtttctgttcatgaagaacaaagtgcggatgat 183
            |||||| | ||||||||||| |||||||||||||||||||||||
Sbjct: 2116 caagcatccaggtttctgtttatgaagaacaaagtgcggatgat 2159

---

>gb|AY672995.1| Triticum aestivum cultivar Chinese Spring Tourist MITE, complete
            sequence; and phytochrome C (PhyC-5A) gene, complete cds
          Length = 5582

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 135/164 (82%)
 Strand = Plus / Plus

                                                                        
Query: 20   tatgatagggttatggcttacaagttccatgaagataaccatggcgaggtctttgccgag 79
            ||||| ||||| ||||| |||||||||||||| ||  | ||||| |||||| ||||||||
Sbjct: 1996 tatgacagggtgatggcatacaagttccatgaggacgagcatggtgaggtcattgccgag 2055

                                                                        
Query: 80   atcacaaagcctggccttgagccttatctcggcctgcactatccagccactgatatccct 139
              ||  | | |||   | ||||| ||||| ||||||||||| || || ||||| ||||| 
Sbjct: 2056 tgcaggaggtctgatttggagccgtatcttggcctgcactacccggcaactgacatccca 2115

                                                        
Query: 140  caagcagctaggtttctgttcatgaagaacaaagtgcggatgat 183
            |||||| | ||||||||||| |||||||||||||||||||||||
Sbjct: 2116 caagcatccaggtttctgtttatgaagaacaaagtgcggatgat 2159

---

>gb|AY672994.1| Triticum aestivum subsp. spelta cultivar Grey Tourist MITE, complete
            sequence; and phytochrome C (PhyC-5A) gene, complete cds
          Length = 5570

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 135/164 (82%)
 Strand = Plus / Plus

                                                                        
Query: 20   tatgatagggttatggcttacaagttccatgaagataaccatggcgaggtctttgccgag 79
            ||||| ||||| ||||| |||||||||||||| ||  | ||||| |||||| ||||||||
Sbjct: 2050 tatgacagggtgatggcatacaagttccatgaggacgagcatggtgaggtcattgccgag 2109

                                                                        
Query: 80   atcacaaagcctggccttgagccttatctcggcctgcactatccagccactgatatccct 139
              ||  | | |||   | ||||| ||||| ||||||||||| || || ||||| ||||| 
Sbjct: 2110 tgcaggaggtctgatttggagccgtatcttggcctgcactacccggcaactgacatccca 2169

                                                        
Query: 140  caagcagctaggtttctgttcatgaagaacaaagtgcggatgat 183
            |||||| | ||||||||||| |||||||||||||||||||||||
Sbjct: 2170 caagcatccaggtttctgtttatgaagaacaaagtgcggatgat 2213

---

>emb|AJ295224.1|TAE295224 Triticum aestivum phyC gene for phytochrome C, exons 1-4
          Length = 7219

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 135/164 (82%)
 Strand = Plus / Plus

                                                                        
Query: 20   tatgatagggttatggcttacaagttccatgaagataaccatggcgaggtctttgccgag 79
            ||||| ||||| ||||| |||||||||||||| ||  | ||||| |||||| ||||||||
Sbjct: 2842 tatgacagggtgatggcatacaagttccatgaggacgagcatggtgaggtcattgccgag 2901

                                                                        
Query: 80   atcacaaagcctggccttgagccttatctcggcctgcactatccagccactgatatccct 139
              ||  | | |||   | ||||| ||||| ||||||||||| || || ||||| ||||| 
Sbjct: 2902 tgcaggaggtctgatttggagccgtatcttggcctgcactacccggcaactgacatccca 2961

                                                        
Query: 140  caagcagctaggtttctgttcatgaagaacaaagtgcggatgat 183
            |||||| | ||||||||||| |||||||||||||||||||||||
Sbjct: 2962 caagcatccaggtttctgtttatgaagaacaaagtgcggatgat 3005

---

>gb|AF004804.1|AF004804 Pongamiopsis amygdalina phytochrome A3 (PHYA3) gene, partial cds
          Length = 373

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 81/92 (88%)
 Strand = Plus / Plus

                                                                       
Query: 44  ttccatgaagataaccatggcgaggtctttgccgagatcacaaagcctggccttgagcct 103
           |||||||| ||| | ||||| |||||  |||||||||| |||||||| ||||||||||| 
Sbjct: 13  ttccatgaggatgatcatggggaggtgattgccgagataacaaagccaggccttgagcca 72

                                           
Query: 104 tatctcggcctgcactatccagccactgatat 135
           ||||| ||| ||||||||||||||||||||||
Sbjct: 73  tatctgggcttgcactatccagccactgatat 104

---

>gb|AF004803.1|AF004803 Pongamiopsis amygdalina phytochrome A2 (PHYA2) gene, partial cds
          Length = 453

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 99/116 (85%)
 Strand = Plus / Plus

                                                                       
Query: 26  agggttatggcttacaagttccatgaagataaccatggcgaggtctttgccgagatcaca 85
           |||||||||||||| |||||||| || ||| | ||||| || ||  |||| ||| ||| |
Sbjct: 1   agggttatggcttataagttccacgaggatgatcatggagaagtgattgctgaggtcaaa 60

                                                                   
Query: 86  aagcctggccttgagccttatctcggcctgcactatccagccactgatatccctca 141
           ||||||||||| ||||||||||| ||  |||||||||||||||||||||| |||||
Sbjct: 61  aagcctggcctagagccttatctgggtttgcactatccagccactgatattcctca 116

---

>gb|AF004783.1|AF004783 Millettia dura phytochrome A (PHYA) gene, partial cds
          Length = 621

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 117/140 (83%)
 Strand = Plus / Plus

                                                                       
Query: 32  atggcttacaagttccatgaagataaccatggcgaggtctttgccgagatcacaaagcct 91
           ||||| |||||||| ||||| ||| | ||||| |||||  |||| ||||| |||||||| 
Sbjct: 4   atggcgtacaagtttcatgaggatgatcatggggaggtgattgctgagataacaaagcca 63

                                                                       
Query: 92  ggccttgagccttatctcggcctgcactatccagccactgatatccctcaagcagctagg 151
           ||||||||||| ||||| ||  |||||||||||||||||||||| || || || ||  ||
Sbjct: 64  ggccttgagccatatctgggtttgcactatccagccactgatattccccaggctgcacgg 123

                               
Query: 152 tttctgttcatgaagaacaa 171
           ||| | ||||||||||||||
Sbjct: 124 tttttattcatgaagaacaa 143

---

>emb|AM233973.1| Lathraea squamaria partial phya gene for phytochrome A, clone
           1553_8_1
          Length = 1836

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 140/171 (81%)
 Strand = Plus / Plus

                                                                       
Query: 20  tatgatagggttatggcttacaagttccatgaagataaccatggcgaggtctttgccgag 79
           ||||||||||| ||| | || ||||| || || ||| | || || ||||| ||| |||||
Sbjct: 220 tatgatagggtgatgacatataagtttcacgaggatgatcacggagaggtatttaccgag 279

                                                                       
Query: 80  atcacaaagcctggccttgagccttatctcggcctgcactatccagccactgatatccct 139
           ||||| || || ||||||||||||||| | ||| |||| |||||||| || |||||||| 
Sbjct: 280 atcaccaaaccgggccttgagccttatgtgggcttgcattatccagctacggatatcccg 339

                                                              
Query: 140 caagcagctaggtttctgttcatgaagaacaaagtgcggatgatttgcgat 190
           || |||||| | |||||||| |||||||| |||||  ||||||| ||||||
Sbjct: 340 caggcagctcgttttctgtttatgaagaataaagtcaggatgatatgcgat 390



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                         
Query: 273 cacacagctgtcaccttcagtatatggagaacatgaactcgattgc 318
           |||||||||| || || ||||| |||||||||||||||||||||||
Sbjct: 473 cacacagctgccatctgcagtacatggagaacatgaactcgattgc 518

---

>emb|AM233966.1| Hyobanche rubra partial phya gene for phytochrome A, clone 1514_1_3
          Length = 1854

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 137/167 (82%)
 Strand = Plus / Plus

                                                                       
Query: 20  tatgatagggttatggcttacaagttccatgaagataaccatggcgaggtctttgccgag 79
           |||||| |||| |||| ||||| |||||| || ||  ||||||| ||||| || ||||||
Sbjct: 220 tatgatcgggtgatggtttacaggttccacgatgacgaccatggggaggtgttcgccgag 279

                                                                       
Query: 80  atcacaaagcctggccttgagccttatctcggcctgcactatccagccactgatatccct 139
           ||||||| ||| ||||| ||||| ||  | ||||||||||| || |||||||| ||||| 
Sbjct: 280 atcacaaggccgggcctcgagccgtacgtgggcctgcactacccggccactgacatcccc 339

                                                          
Query: 140 caagcagctaggtttctgttcatgaagaacaaagtgcggatgatttg 186
           || || ||| |||| |||||| |||||||||| ||  ||||||||||
Sbjct: 340 caggcggctcggttcctgttcttgaagaacaaggttaggatgatttg 386



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 296 atggagaacatgaactcgattgcatcccttgtcatg 331
           |||||||| |||||||||||||| ||||| ||||||
Sbjct: 496 atggagaatatgaactcgattgcgtccctggtcatg 531

---

>emb|AM233935.1| Buchnera floridana partial phya gene for phytochrome A, clone
           718_5_3
          Length = 1398

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 122/147 (82%)
 Strand = Plus / Plus

                                                                       
Query: 43  gttccatgaagataaccatggcgaggtctttgccgagatcacaaagcctggccttgagcc 102
           ||||||||| ||  ||||||| ||||| |||||||||||||| | ||||||||| |||||
Sbjct: 243 gttccatgacgacgaccatggggaggtgtttgccgagatcacgaggcctggcctcgagcc 302

                                                                       
Query: 103 ttatctcggcctgcactatccagccactgatatccctcaagcagctaggtttctgttcat 162
            ||  | ||||||||||| |||||||| || ||||| || || ||  | |||||||||||
Sbjct: 303 gtacttgggcctgcactacccagccaccgacatcccccaggcggcccgttttctgttcat 362

                                      
Query: 163 gaagaacaaagtgcggatgatttgcga 189
           ||||||||| ||  ||||||| |||||
Sbjct: 363 gaagaacaaggttaggatgatctgcga 389



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 52/57 (91%)
 Strand = Plus / Plus

                                                                    
Query: 275 cacagctgtcaccttcagtatatggagaacatgaactcgattgcatcccttgtcatg 331
           |||||||| ||||| | ||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 475 cacagctgccacctgcggtacatggagaacatgaactcgattgcatccctagtcatg 531

---

>emb|AM234025.1| Striga bilabiata partial phya gene for phytochrome A, clone
           1322_2_1
          Length = 1398

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 110/131 (83%)
 Strand = Plus / Plus

                                                                       
Query: 41  aagttccatgaagataaccatggcgaggtctttgccgagatcacaaagcctggccttgag 100
           ||||||||||||||  ||||||| ||||| ||||| ||| |||||| ||||||||| |||
Sbjct: 241 aagttccatgaagacgaccatggggaggtgtttgctgaggtcacaaggcctggcctcgag 300

                                                                       
Query: 101 ccttatctcggcctgcactatccagccactgatatccctcaagcagctaggtttctgttc 160
           || ||  | ||||||||||| |||||||| || ||||| || || ||  | |||||||||
Sbjct: 301 ccgtacttgggcctgcactacccagccaccgacatcccccaggctgcccgctttctgttc 360

                      
Query: 161 atgaagaacaa 171
           |||||||||||
Sbjct: 361 atgaagaacaa 371



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 35/36 (97%)
 Strand = Plus / Plus

                                               
Query: 296 atggagaacatgaactcgattgcatcccttgtcatg 331
           ||||||||||||||||||||||||||||| ||||||
Sbjct: 496 atggagaacatgaactcgattgcatccctagtcatg 531

---

>dbj|AB036763.1| Armoracia rusticana ArPHYA16 mRNA for phytochrome A, complete cds
          Length = 3909

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 146/179 (81%)
 Strand = Plus / Plus

                                                                        
Query: 5    tttgaacttacagggtatgatagggttatggcttacaagttccatgaagataaccatggc 64
            |||||||| || || ||||| ||||| |||||||| ||||| ||||||||| | || || 
Sbjct: 984  tttgaactcacgggctatgacagggtgatggcttataagtttcatgaagatgatcacggt 1043

                                                                        
Query: 65   gaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcactatcca 124
            |||||  |  | ||| | ||||| ||||| || ||||| ||||| || ||||| ||||||
Sbjct: 1044 gaggtagtctctgaggttacaaaacctggactagagccatatcttgggctgcattatcca 1103

                                                                       
Query: 125  gccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgat 183
            ||||| || ||||||||||||||  | |||||||| ||||||||||| || ||||||||
Sbjct: 1104 gccaccgacatccctcaagcagcccgttttctgtttatgaagaacaaggtccggatgat 1162

---

>gb|AY672999.1| Triticum aestivum cultivar Soleil phytochrome C (PhyC-5B) gene,
            complete cds
          Length = 5525

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 76/86 (88%)
 Strand = Plus / Plus

                                                                        
Query: 98   gagccttatctcggcctgcactatccagccactgatatccctcaagcagctaggtttctg 157
            ||||| ||||| ||||||||||| || || ||||| ||||| |||||| | |||||||||
Sbjct: 2009 gagccgtatcttggcctgcactacccggcaactgacatcccgcaagcatccaggtttctg 2068

                                      
Query: 158  ttcatgaagaacaaagtgcggatgat 183
            || |||||||||||||||||||||||
Sbjct: 2069 tttatgaagaacaaagtgcggatgat 2094



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                        
Query: 20   tatgatagggttatggcttacaagttccatgaagataaccatggcgaggtctttgccgag 79
            ||||| ||||| ||||| ||||||||||| || ||| | ||||| |||||| ||||||||
Sbjct: 1931 tatgacagggtgatggcatacaagttccacgaggatgagcatggtgaggtcattgccgag 1990

---

>gb|AF276727.1|AF276727 Hypecoum imberbe phytochrome A (PHYA) gene, partial cds
          Length = 1245

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 130/158 (82%)
 Strand = Plus / Plus

                                                                       
Query: 11  cttacagggtatgatagggttatggcttacaagttccatgaagataaccatggcgaggtc 70
           ||||| || |||||||| || ||||||||  | || ||||||||| ||||||| ||||| 
Sbjct: 211 cttactggttatgatagagtgatggcttattactttcatgaagatgaccatggtgaggtt 270

                                                                       
Query: 71  tttgccgagatcacaaagcctggccttgagccttatctcggcctgcactatccagccact 130
            | |||||| |||| || |||||||||||||||||  | ||  |||| ||||||||||||
Sbjct: 271 atagccgaggtcacgaaacctggccttgagccttacttggggttgcattatccagccact 330

                                                 
Query: 131 gatatccctcaagcagctaggtttctgttcatgaagaa 168
            | || |||||||| ||||||||||| || ||||||||
Sbjct: 331 tacatacctcaagctgctaggtttctatttatgaagaa 368



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                   
Query: 293 tatatggagaacatgaactcgattgcatcccttgtcatggctgttgtggttaatga 348
           |||||||||||||||   |||||||| || || || |||||||| ||||| |||||
Sbjct: 493 tatatggagaacatgggatcgattgcttcgctggttatggctgtggtggtgaatga 548

---

>gb|AF190102.1|AF190102 Sagittaria sp. Mathews 383 specimen-voucher Mathews 383 phytochrome
           A (PHYA) gene, partial cds
          Length = 1182

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 139/170 (81%)
 Strand = Plus / Plus

                                                                       
Query: 2   gtctttgaacttacagggtatgatagggttatggcttacaagttccatgaagataaccat 61
           ||||||||||| ||||| ||||||||||| |||||||| ||||||||||| ||| |||||
Sbjct: 130 gtctttgaactcacaggatatgatagggtgatggcttataagttccatgaggatgaccat 189

                                                                       
Query: 62  ggcgaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcactat 121
           || || ||  |  | ||| |||||||||||||||| || ||||| || ||  |||| |||
Sbjct: 190 ggagaagtagtgtcggaggtcacaaagcctggcctggacccttacctgggattgcattat 249

                                                             
Query: 122 ccagccactgatatccctcaagcagctaggtttctgttcatgaagaacaa 171
           || ||||| || || || || || ||||| ||| |||| |||||||||||
Sbjct: 250 cctgccacagacattccccaggcggctagatttttgtttatgaagaacaa 299



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                            
Query: 273 cacacagctgtcaccttcagtatatggagaacatgaactcgattgcatc 321
           ||||||| || ||||| |||||||||||||| ||| | |||||||||||
Sbjct: 401 cacacagttgccacctgcagtatatggagaatatggattcgattgcatc 449



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                        
Query: 389 cagcagcagaagaagaagatactatggggccttgttgtttgccac 433
           |||||||||| || |||||  || |||||||||||||| ||||||
Sbjct: 529 cagcagcagaggaggaagaggctctggggccttgttgtctgccac 573

---

>gb|AF190096.1|AF190096 Nelumbo nucifera phytochrome A (PHYA) gene, partial cds
          Length = 1167

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 148/182 (81%)
 Strand = Plus / Plus

                                                                       
Query: 5   tttgaacttacagggtatgatagggttatggcttacaagttccatgaagataaccatggc 64
           ||||| || ||||| ||||||||||| ||||| || || || ||||| ||| ||||||| 
Sbjct: 133 tttgagctcacaggctatgatagggtgatggcctataaatttcatgaggatgaccatggg 192

                                                                       
Query: 65  gaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcactatcca 124
           |||||  || | ||||||||||| || || |||||||| ||  | |||||||| ||||||
Sbjct: 193 gaggttgtttctgagatcacaaaaccaggacttgagccctacttgggcctgcattatcca 252

                                                                       
Query: 125 gccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgatt 184
           ||||| || ||||| || ||||| |||||  | |||||||||||||| || || ||||||
Sbjct: 253 gccacagacatcccccaggcagcaaggttcttattcatgaagaacaaggtccgtatgatt 312

             
Query: 185 tg 186
           ||
Sbjct: 313 tg 314

---

>emb|AM233919.1| Melampyrum arvense partial phya gene for phytochrome A, clone
           1658_5_2
          Length = 1815

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 97/114 (85%)
 Strand = Plus / Plus

                                                                       
Query: 77  gagatcacaaagcctggccttgagccttatctcggcctgcactatccagccactgatatc 136
           ||||||||||| || |||||||||||||||   ||| |||| |||||||| || ||||||
Sbjct: 277 gagatcacaaaaccgggccttgagccttatgcgggcttgcattatccagctacagatatc 336

                                                                 
Query: 137 cctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgatttgcgat 190
           || |||||| || | |||||||| |||||||| |||||  ||||||||||||||
Sbjct: 337 ccacaagcatctcgttttctgtttatgaagaataaagtaaggatgatttgcgat 390



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                        
Query: 290 cagtatatggagaacatgaactcgattgc 318
           |||||||||||||||||||||||||||||
Sbjct: 490 cagtatatggagaacatgaactcgattgc 518

---

>emb|AM234031.1| Tozzia alpina partial phya gene for phytochrome A, clone 1553_2_1
          Length = 1836

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 97/114 (85%)
 Strand = Plus / Plus

                                                                       
Query: 77  gagatcacaaagcctggccttgagccttatctcggcctgcactatccagccactgatatc 136
           |||||||||||||| ||||||||||||||| | ||| |||| ||||| || || ||||||
Sbjct: 277 gagatcacaaagccgggccttgagccttatgtgggcttgcattatccggctacggatatc 336

                                                                 
Query: 137 cctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgatttgcgat 190
           || ||||||||| | |||||||| |||||||| || ||  ||||||| ||||||
Sbjct: 337 ccacaagcagctcgttttctgtttatgaagaataaggtcaggatgatatgcgat 390



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                            
Query: 273 cacacagctgtcaccttcagtatatggagaacatgaactcgattgcatc 321
           |||||| ||| || || ||||| ||||||||||||||||||||||||||
Sbjct: 473 cacacaactgccatctgcagtacatggagaacatgaactcgattgcatc 521

---

>emb|AM234026.1| Striga gesnerioides partial phya gene for phytochrome A, clone
           1626_2b_3
          Length = 1475

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 121/146 (82%)
 Strand = Plus / Plus

                                                                       
Query: 41  aagttccatgaagataaccatggcgaggtctttgccgagatcacaaagcctggccttgag 100
           ||||||||||||||  ||||||| ||||| ||||| ||| |||||| |||||| || |||
Sbjct: 241 aagttccatgaagacgaccatggggaggtgtttgctgaggtcacaaggcctgggctcgag 300

                                                                       
Query: 101 ccttatctcggcctgcactatccagccactgatatccctcaagcagctaggtttctgttc 160
           || ||  | ||||||||||| |||||||| || ||||| || || ||  | |||||||||
Sbjct: 301 ccgtacttgggcctgcactacccagccaccgacatcccccaggcggcccgctttctgttc 360

                                     
Query: 161 atgaagaacaaagtgcggatgatttg 186
           ||||||||||| ||  ||||||||||
Sbjct: 361 atgaagaacaaggttaggatgatttg 386



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 35/36 (97%)
 Strand = Plus / Plus

                                               
Query: 296 atggagaacatgaactcgattgcatcccttgtcatg 331
           ||||||||||||||||||||||||||||| ||||||
Sbjct: 496 atggagaacatgaactcgattgcatccctagtcatg 531

---

>gb|U78616.1|CMU78616 Coursetia madrensis phytochrome A (PHYA) gene, partial cds
          Length = 462

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 94/110 (85%)
 Strand = Plus / Plus

                                                                       
Query: 26  agggttatggcttacaagttccatgaagataaccatggcgaggtctttgccgagatcaca 85
           ||||| ||||| || ||||||||||| ||| | ||||| |||||  |||| ||||| |||
Sbjct: 1   agggtaatggcgtataagttccatgaggatgatcatggagaggtgattgctgagataaca 60

                                                             
Query: 86  aagcctggccttgagccttatctcggcctgcactatccagccactgatat 135
           ||||||||||| ||||| ||||| ||  ||||||||||||||||||||||
Sbjct: 61  aagcctggcctagagccatatctgggtttgcactatccagccactgatat 110

---

>emb|AM233999.1| Parentucellia latifolia partial phya gene for phytochrome A, clone
           1408_12_1
          Length = 1830

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 129/157 (82%)
 Strand = Plus / Plus

                                                                       
Query: 8   gaacttacagggtatgatagggttatggcttacaagttccatgaagataaccatggcgag 67
           ||||| ||||| ||||||||||| |||   || ||||| || || ||| | ||||| |||
Sbjct: 208 gaactcacaggttatgatagggtgatgatatataagtttcacgatgatgatcatggagag 267

                                                                       
Query: 68  gtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcactatccagcc 127
           ||  |||| ||||||||||| |||||||||||||||||| | ||| |||| |||||||| 
Sbjct: 268 gttcttgctgagatcacaaaacctggccttgagccttatgttggcttgcattatccagct 327

                                                
Query: 128 actgatatccctcaagcagctaggtttctgttcatga 164
           || |||||||| || |||||| | |||||||| ||||
Sbjct: 328 acagatatcccacaggcagctcgttttctgtttatga 364



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                         
Query: 273 cacacagctgtcaccttcagtatatggagaacatgaactcgattgc 318
           |||||||||| || || ||||| |||||||||||||||||||||||
Sbjct: 473 cacacagctgccatctgcagtacatggagaacatgaactcgattgc 518

---

>gb|AF004776.1|AF004776 Dahlstedtia pinnata phytochrome A (PHYA) gene, partial cds
          Length = 623

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 93/109 (85%)
 Strand = Plus / Plus

                                                                       
Query: 27  gggttatggcttacaagttccatgaagataaccatggcgaggtctttgccgagatcacaa 86
           |||| |||||||| ||||| ||||| ||| | ||||| |||||  |||| ||||| ||||
Sbjct: 1   gggtgatggcttataagtttcatgaggatgatcatggggaggtgattgctgagataacaa 60

                                                            
Query: 87  agcctggccttgagccttatctcggcctgcactatccagccactgatat 135
           |||| ||||||||||| ||||| ||  ||||||||||||||||||||||
Sbjct: 61  agccaggccttgagccatatctgggtttgcactatccagccactgatat 109

---

>dbj|AP004520.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT05P01, TM0048,
             complete sequence
          Length = 110811

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 114/137 (83%)
 Strand = Plus / Plus

                                                                         
Query: 5     tttgaacttacagggtatgatagggttatggcttacaagttccatgaagataaccatggc 64
             |||||||| ||||| ||||||||||| |||||||| || || ||||| ||| | ||||| 
Sbjct: 36077 tttgaactcacaggttatgatagggtgatggcttataaatttcatgaggatgatcatgga 36136

                                                                         
Query: 65    gaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcactatcca 124
             |||||  |||| ||||| |||||||| || || ||||| ||||| ||  | |||||||||
Sbjct: 36137 gaggtgattgctgagataacaaagcccgggctagagccatatctgggtttacactatcca 36196

                              
Query: 125   gccactgatatccctca 141
             ||||||||||| |||||
Sbjct: 36197 gccactgatattcctca 36213

---

>gb|AY348567.1| Cuscuta pentagona phytochrome A (phyA) mRNA, complete cds
          Length = 3948

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 134/164 (81%)
 Strand = Plus / Plus

                                                                        
Query: 5    tttgaacttacagggtatgatagggttatggcttacaagttccatgaagataaccatggc 64
            |||||||| || || |||||||| || |||||||| ||||| || || ||  |||| || 
Sbjct: 860  tttgaactaaccggctatgatagagtgatggcttataagtttcacgatgacgaccacggg 919

                                                                        
Query: 65   gaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcactatcca 124
            |||||  || | ||||| || ||||| ||||| ||||||||  | ||| |||| ||||||
Sbjct: 920  gaggttgtttctgagataactaagccaggcctcgagccttacttgggcttgcattatcca 979

                                                        
Query: 125  gccactgatatccctcaagcagctaggtttctgttcatgaagaa 168
            |||||||||||||||||||| ||  ||||| |||||||||||||
Sbjct: 980  gccactgatatccctcaagctgcacggtttttgttcatgaagaa 1023

---

>gb|U83266.1|PPU83266 Pongamia pinnata phytochrome A (PHYA) gene, exon 1, partial cds
          Length = 630

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 98/116 (84%)
 Strand = Plus / Plus

                                                                       
Query: 20  tatgatagggttatggcttacaagttccatgaagataaccatggcgaggtctttgccgag 79
           ||||| ||||||||||| || ||||| ||||| ||| | ||||| |||||  |||| |||
Sbjct: 1   tatgacagggttatggcctataagtttcatgaggatgatcatggggaggtgattgctgag 60

                                                                   
Query: 80  atcacaaagcctggccttgagccttatctcggcctgcactatccagccactgatat 135
           || |||||||| ||||||||||| ||| | ||  ||||||||||||||||||||||
Sbjct: 61  ataacaaagccaggccttgagccatatatgggtttgcactatccagccactgatat 116

---

>gb|AF190108.1|AF190108 Trochodendron aralioides phytochrome A (PHYA) gene, partial cds
          Length = 1203

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 82/95 (86%)
 Strand = Plus / Plus

                                                                       
Query: 77  gagatcacaaagcctggccttgagccttatctcggcctgcactatccagccactgatatc 136
           |||||||||||||| ||||| ||||| |||||||| ||||| ||||| ||||| || |||
Sbjct: 274 gagatcacaaagccaggcctcgagccctatctcggtctgcattatccggccacagacatc 333

                                              
Query: 137 cctcaagcagctaggtttctgttcatgaagaacaa 171
           |||||||| ||  |||| || ||||||||||||||
Sbjct: 334 cctcaagctgcacggttcctcttcatgaagaacaa 368

---

>gb|AF190076.1|AF190076 Chloranthus spicatus phytochrome A (PHYA) gene, partial cds
          Length = 1173

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 145/179 (81%)
 Strand = Plus / Plus

                                                                       
Query: 5   tttgaacttacagggtatgatagggttatggcttacaagttccatgaagataaccatggc 64
           |||||||| || || || ||||||| ||||||||| ||||| || |||||| | || || 
Sbjct: 133 tttgaactgacgggttacgatagggctatggcttataagtttcacgaagatgatcacggg 192

                                                                       
Query: 65  gaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcactatcca 124
           |||||| |  | || |  |||||||||||||| || |||||| | || || || ||||| 
Sbjct: 193 gaggtcatctcagaaactacaaagcctggcctggaaccttatttgggtctacattatccg 252

                                                                      
Query: 125 gccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgat 183
           ||||| ||||| || ||||| ||||||||| |||||||||||||||| || ||||||||
Sbjct: 253 gccacagatataccccaagccgctaggtttttgttcatgaagaacaaggttcggatgat 311

---

>emb|AM234029.1| Striga orobanchoides partial phya gene for phytochrome A, clone
           1322_12_1
          Length = 1383

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 109/131 (83%)
 Strand = Plus / Plus

                                                                       
Query: 41  aagttccatgaagataaccatggcgaggtctttgccgagatcacaaagcctggccttgag 100
           ||||||||||||||  ||||||| ||||| ||||| ||| |||||| |||||| || |||
Sbjct: 241 aagttccatgaagacgaccatggggaggtgtttgctgaggtcacaaggcctgggctcgag 300

                                                                       
Query: 101 ccttatctcggcctgcactatccagccactgatatccctcaagcagctaggtttctgttc 160
           || ||  | ||||||||||| |||||||| || ||||| || || ||  | |||||||||
Sbjct: 301 ccgtacttgggcctgcactacccagccaccgacatcccccaggcggcccgctttctgttc 360

                      
Query: 161 atgaagaacaa 171
           |||||||||||
Sbjct: 361 atgaagaacaa 371



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 35/36 (97%)
 Strand = Plus / Plus

                                               
Query: 296 atggagaacatgaactcgattgcatcccttgtcatg 331
           ||||||||||||||||||||||||||||| ||||||
Sbjct: 496 atggagaacatgaactcgattgcatccctagtcatg 531

---

>emb|AM234027.1| Striga linearifolia partial phya gene for phytochrome A, clone
           1413_17_4
          Length = 1854

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 109/131 (83%)
 Strand = Plus / Plus

                                                                       
Query: 41  aagttccatgaagataaccatggcgaggtctttgccgagatcacaaagcctggccttgag 100
           ||||||||||||||  ||||||| ||||| ||||| ||| |||||| ||||||||| |||
Sbjct: 241 aagttccatgaagacgaccatggggaggtgtttgctgaggtcacaaggcctggcctagag 300

                                                                       
Query: 101 ccttatctcggcctgcactatccagccactgatatccctcaagcagctaggtttctgttc 160
           || ||  | ||| ||||||| |||||||| || ||||| || || ||  | |||||||||
Sbjct: 301 ccgtacttgggcttgcactacccagccaccgacatcccccaggcggcccgctttctgttc 360

                      
Query: 161 atgaagaacaa 171
           |||||||||||
Sbjct: 361 atgaagaacaa 371



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 36/36 (100%)
 Strand = Plus / Plus

                                               
Query: 296 atggagaacatgaactcgattgcatcccttgtcatg 331
           ||||||||||||||||||||||||||||||||||||
Sbjct: 496 atggagaacatgaactcgattgcatcccttgtcatg 531

---

>gb|AF004802.1|AF004802 Pongamiopsis amygdalina phytochrome A (PHYA) gene, partial cds
          Length = 435

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 91/107 (85%)
 Strand = Plus / Plus

                                                                       
Query: 29  gttatggcttacaagttccatgaagataaccatggcgaggtctttgccgagatcacaaag 88
           |||||||| || ||||| ||||||||| | ||||| |||||  |||| ||||| ||||||
Sbjct: 1   gttatggcatataagtttcatgaagatgatcatggggaggtgattgctgagataacaaag 60

                                                          
Query: 89  cctggccttgagccttatctcggcctgcactatccagccactgatat 135
           || ||||||||||| ||||| ||  | ||||||||||||||||||||
Sbjct: 61  ccaggccttgagccatatctgggtttacactatccagccactgatat 107

---

>gb|AY673002.1|AY673001S2 Triticum aestivum cultivar Chinese Spring phytochrome C (PhyC-5D)
            gene, complete cds
          Length = 6658

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 75/86 (87%)
 Strand = Plus / Plus

                                                                        
Query: 98   gagccttatctcggcctgcactatccagccactgatatccctcaagcagctaggtttctg 157
            ||||| ||||| || |||||||| || || ||||| ||||| |||||| | |||||||||
Sbjct: 1760 gagccgtatcttggtctgcactacccggcaactgacatcccacaagcatccaggtttctg 1819

                                      
Query: 158  ttcatgaagaacaaagtgcggatgat 183
            || |||||||||||||||||||||||
Sbjct: 1820 tttatgaagaacaaagtgcggatgat 1845



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                    
Query: 20   tatgatagggttatggcttacaagttccatgaagataaccatggcgaggtctttgc 75
            ||||| ||||| ||||| |||||||||||||| ||| | ||||| |||||| ||||
Sbjct: 1682 tatgacagggtgatggcatacaagttccatgaggatgagcatggtgaggtcattgc 1737

---

>gb|AY673000.1| Triticum aestivum cultivar Soleil phytochrome C (PhyC-5D) gene,
            complete cds
          Length = 5600

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 75/86 (87%)
 Strand = Plus / Plus

                                                                        
Query: 98   gagccttatctcggcctgcactatccagccactgatatccctcaagcagctaggtttctg 157
            ||||| ||||| || |||||||| || || ||||| ||||| |||||| | |||||||||
Sbjct: 2089 gagccgtatcttggtctgcactacccggcaactgacatcccacaagcatccaggtttctg 2148

                                      
Query: 158  ttcatgaagaacaaagtgcggatgat 183
            || |||||||||||||||||||||||
Sbjct: 2149 tttatgaagaacaaagtgcggatgat 2174



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                    
Query: 20   tatgatagggttatggcttacaagttccatgaagataaccatggcgaggtctttgc 75
            ||||| ||||| ||||| |||||||||||||| ||| | ||||| |||||| ||||
Sbjct: 2011 tatgacagggtgatggcatacaagttccatgaggatgagcatggtgaggtcattgc 2066

---

>gb|U08177.1|PCU08177 Panicum capillare phytochrome (PHYA), partial cds
          Length = 339

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 96/114 (84%)
 Strand = Plus / Plus

                                                                       
Query: 229 actcccctttgatattagcttgtgtggttcatcactcagggcagcacacagctgtcacct 288
           ||||||| || || ||||||||||||||||| | || |||||| ||||||  || | |||
Sbjct: 90  actcccccttcatgttagcttgtgtggttcaactcttagggcaccacacacgtgccgcct 149

                                                                 
Query: 289 tcagtatatggagaacatgaactcgattgcatcccttgtcatggctgttgtggt 342
           |||||||||| |||||||||| ||| |||| ||||| || || |||||||||||
Sbjct: 150 tcagtatatgaagaacatgaagtcggttgcgtccctagtaatcgctgttgtggt 203



 Score = 46.1 bits (23), Expect = 0.097
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 140 caagcagctaggtttctgttcatgaagaacaaagt 174
           ||||| || |||||||| |||||||||||||||||
Sbjct: 1   caagctgcaaggtttcttttcatgaagaacaaagt 35

---

>gb|AF276742.1|AF276742 Sarcandra glabra phytochrome C (PHYC) gene, partial cds
          Length = 1396

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 75/86 (87%)
 Strand = Plus / Plus

                                                                       
Query: 101 ccttatctcggcctgcactatccagccactgatatccctcaagcagctaggtttctgttc 160
           |||||||||||| |||| || || || || ||||||||||||||| | ||||||||||||
Sbjct: 301 ccttatctcggcttgcattaccctgctaccgatatccctcaagcatcaaggtttctgttc 360

                                     
Query: 161 atgaagaacaaagtgcggatgatttg 186
           ||||||||||| ||  ||||||||||
Sbjct: 361 atgaagaacaaggttaggatgatttg 386

---

>gb|AF190068.1|AF190068 Austrobaileya scandens phytochrome A (PHYA) gene, partial cds
          Length = 1035

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 78/90 (86%)
 Strand = Plus / Plus

                                                                       
Query: 101 ccttatctcggcctgcactatccagccactgatatccctcaagcagctaggtttctgttc 160
           |||||||| || ||||| ||||| ||||| ||||||||||| |||||| | ||| |||||
Sbjct: 88  ccttatctgggtctgcattatcctgccacggatatccctcaggcagctcgatttttgttc 147

                                         
Query: 161 atgaagaacaaagtgcggatgatttgcgat 190
           ||||||||||| || || ||||||||||||
Sbjct: 148 atgaagaacaaggttcgtatgatttgcgat 177

---

>emb|AJ286635.1|DFR286635 Dacrydium franklinii partial phyO gene for phytochrome
          Length = 567

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                       
Query: 116 cactatccagccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtg 175
           |||||||| ||||||||||| || ||||| || || ||||||||||||||||||||||||
Sbjct: 64  cactatccggccactgatattccccaagctgcgagatttctgttcatgaagaacaaagtg 123

                         
Query: 176 cggatgatttgcga 189
            | |||||||||||
Sbjct: 124 agaatgatttgcga 137

---

>emb|AM233938.1| Castilleja coccinea partial phya gene for phytochrome A, clone
           1551_1_1
          Length = 1773

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 150/186 (80%)
 Strand = Plus / Plus

                                                                       
Query: 5   tttgaacttacagggtatgatagggttatggcttacaagttccatgaagataaccatggc 64
           |||||||| || || ||||| ||||| |||  ||| || |||||||| ||  | ||||||
Sbjct: 151 tttgaactcacgggctatgacagggtgatgatttataaattccatgacgacgatcatggc 210

                                                                       
Query: 65  gaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcactatcca 124
           ||||| ||  ||||| |||| || || |||||||| |||||| | ||| |||||||||||
Sbjct: 211 gaggttttatccgaggtcacgaaaccgggccttgaaccttatgtgggcttgcactatcca 270

                                                                       
Query: 125 gccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgatt 184
           || ||||| |||||||| |||||  ||||| ||||| | |||||||| ||  ||||||| 
Sbjct: 271 gcgactgacatccctcaggcagcccggtttttgttcctaaagaacaaggtcaggatgata 330

                 
Query: 185 tgcgat 190
           ||||||
Sbjct: 331 tgcgat 336



 Score = 46.1 bits (23), Expect = 0.097
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 273 cacacagctgtcaccttcagtatatggagaacatgaactcgat 315
           |||||||||||||| | ||||| | |||||| |||||||||||
Sbjct: 419 cacacagctgtcacttgcagtacacggagaatatgaactcgat 461

---

>gb|AF004787.1|AF004787 Millettia richardiana phytochrome A (PHYA) gene, partial cds
          Length = 419

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 90/106 (84%)
 Strand = Plus / Plus

                                                                       
Query: 30  ttatggcttacaagttccatgaagataaccatggcgaggtctttgccgagatcacaaagc 89
           ||||||| || ||||| ||||||||| | ||||| |||||  |||| ||||| |||||||
Sbjct: 1   ttatggcgtataagtttcatgaagatgatcatggggaggtgattgctgagataacaaagc 60

                                                         
Query: 90  ctggccttgagccttatctcggcctgcactatccagccactgatat 135
           | ||||||||||| ||||| ||  | ||||||||||||||||||||
Sbjct: 61  caggccttgagccatatctgggtttacactatccagccactgatat 106

---

>gb|U78847.1|PFU78847 Poecilanthe falcata phytochrome A (PHYA) gene, partial cds
          Length = 419

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 93/110 (84%)
 Strand = Plus / Plus

                                                                       
Query: 26  agggttatggcttacaagttccatgaagataaccatggcgaggtctttgccgagatcaca 85
           ||||| ||||| || ||||| ||||| ||| | ||||| |||||  |||| ||||| |||
Sbjct: 4   agggtgatggcgtataagtttcatgaggatgatcatggggaggtgattgctgagataaca 63

                                                             
Query: 86  aagcctggccttgagccttatctcggcctgcactatccagccactgatat 135
           ||||| ||||||||||| ||||| ||  ||||||||||||||||||||||
Sbjct: 64  aagccaggccttgagccatatctgggtttgcactatccagccactgatat 113

---

>gb|AF276745.1|AF276745 Spathiphyllum clevelandii phytochrome A (PHYA) gene, partial cds
          Length = 1176

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 86/101 (85%)
 Strand = Plus / Plus

                                                                       
Query: 5   tttgaacttacagggtatgatagggttatggcttacaagttccatgaagataaccatggc 64
           ||||||||||| || ||||||||||| ||||||||||||||||| || ||| ||||||| 
Sbjct: 133 tttgaacttactggatatgatagggtaatggcttacaagttccacgaggatgaccatgga 192

                                                    
Query: 65  gaggtctttgccgagatcacaaagcctggccttgagcctta 105
           || ||| |  | |||||||| ||||||||||| || |||||
Sbjct: 193 gaagtcgtatcagagatcacgaagcctggcctggaacctta 233

---

>gb|AF190086.1|AF190086 Hernandia lychnifera phytochrome A (PHYA) gene, partial cds
          Length = 1194

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 143/177 (80%)
 Strand = Plus / Plus

                                                                       
Query: 7   tgaacttacagggtatgatagggttatggcttacaagttccatgaagataaccatggcga 66
           ||||||||||||||||||||| || ||||| ||||||||||| || ||| ||||||| ||
Sbjct: 153 tgaacttacagggtatgatagagtgatggcatacaagttccacgatgatgaccatgggga 212

                                                                       
Query: 67  ggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcactatccagc 126
           |||| |  | ||||| |  ||||| | ||| ||||| ||| | || ||||||||||||||
Sbjct: 213 ggtcatctctgagattaagaagccagacctagagccctatttgggtctgcactatccagc 272

                                                                    
Query: 127 cactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgat 183
            || || |||||||| ||| | |||||  | || |||||||| || || ||||||||
Sbjct: 273 taccgacatccctcaggcatccaggttcttatttatgaagaataaggttcggatgat 329

---

>emb|AM233961.1| Euphrasia stricta partial phya gene for phytochrome A, clone
           1718_4a_1
          Length = 1854

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 95/113 (84%)
 Strand = Plus / Plus

                                                                       
Query: 77  gagatcacaaagcctggccttgagccttatctcggcctgcactatccagccactgatatc 136
           ||||||||||| || ||||||||||||||| | ||| |||| ||||| ||||| ||||||
Sbjct: 277 gagatcacaaaaccgggccttgagccttatgtgggcttgcattatccggccacggatatc 336

                                                                
Query: 137 cctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgatttgcga 189
           || || |||||| | |||||||| |||||||| || ||  ||||||| |||||
Sbjct: 337 ccgcaggcagctcgttttctgtttatgaagaataaggtcaggatgatatgcga 389



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                         
Query: 273 cacacagctgtcaccttcagtatatggagaacatgaactcgattgc 318
           ||||||||||||| || ||||| ||||||||||||||||| |||||
Sbjct: 473 cacacagctgtcatctgcagtacatggagaacatgaactccattgc 518

---

>emb|AM233927.1| Bartsia crenata partial phya gene for phytochrome A, clone 1623_4_3
          Length = 1830

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 95/113 (84%)
 Strand = Plus / Plus

                                                                       
Query: 77  gagatcacaaagcctggccttgagccttatctcggcctgcactatccagccactgatatc 136
           ||||||||||| |||||||||||||||||| | ||| |||| |||||||| || ||||||
Sbjct: 277 gagatcacaaaacctggccttgagccttatgtgggcttgcattatccagctacggatatc 336

                                                                
Query: 137 cctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgatttgcga 189
           || || |||||| | |||||||| |||| ||| || ||  ||||||| |||||
Sbjct: 337 ccgcaggcagctcgttttctgtttatgaggaataaggttaggatgatatgcga 389



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                         
Query: 273 cacacagctgtcaccttcagtatatggagaacatgaactcgattgc 318
           |||||||||| || || ||||| |||||||||||||||||||||||
Sbjct: 473 cacacagctgccatctgcagtacatggagaacatgaactcgattgc 518

---

>emb|AM233993.1| Orobanche gracilis partial phya gene for phytochrome A, clone
           1571_5_1
          Length = 1149

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 116/141 (82%)
 Strand = Plus / Plus

                                                                       
Query: 50  gaagataaccatggcgaggtctttgccgagatcacaaagcctggccttgagccttatctc 109
           |||||| | ||||| ||||| ||| ||||||||||||| || ||||| ||||| ||| | 
Sbjct: 196 gaagatgatcatggagaggtttttaccgagatcacaaaaccgggcctcgagccgtatgtg 255

                                                                       
Query: 110 ggcctgcactatccagccactgatatccctcaagcagctaggtttctgttcatgaagaac 169
           ||||||||||||||||| || ||||| ||||| |||||  | ||| | ||||||||||| 
Sbjct: 256 ggcctgcactatccagcaacggatattcctcaggcagcccgttttttattcatgaagaat 315

                                
Query: 170 aaagtgcggatgatttgcgat 190
           || ||| | ||||| ||||||
Sbjct: 316 aaggtgagaatgatatgcgat 336



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 290 cagtatatggagaacatgaactcgat 315
           ||||| ||||||||||||||||||||
Sbjct: 436 cagtacatggagaacatgaactcgat 461

---

>gb|U78854.1|CAU78854 Callerya atropurpurea phytochrome A-like protein (PHYA-like) gene,
           partial cds
          Length = 528

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 95/113 (84%)
 Strand = Plus / Plus

                                                                       
Query: 23  gatagggttatggcttacaagttccatgaagataaccatggcgaggtctttgccgagatc 82
           |||||||| ||||| |||||||||||||| ||| | || || || ||  |||| ||| ||
Sbjct: 4   gatagggtgatggcgtacaagttccatgaggatgatcaaggtgaagtgattgctgaggtc 63

                                                                
Query: 83  acaaagcctggccttgagccttatctcggcctgcactatccagccactgatat 135
           |||||||| ||||| ||||| ||||| ||  ||||||||||||||||||||||
Sbjct: 64  acaaagccaggcctagagccatatctgggtttgcactatccagccactgatat 116

---

>gb|U08183.1|UDU08183 Urtica dioica phytochrome (PHYA), partial cds
          Length = 342

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 76/88 (86%)
 Strand = Plus / Plus

                                                                       
Query: 275 cacagctgtcaccttcagtatatggagaacatgaactcgattgcatcccttgtcatggct 334
           |||||||||||||||||||| |||| ||||||||||||||| || || || |||||||| 
Sbjct: 160 cacagctgtcaccttcagtacatggcgaacatgaactcgatcgcgtcgctggtcatggcg 219

                                       
Query: 335 gttgtggttaatgagagtgaagaggacg 362
           || ||||| || ||| | ||||||||||
Sbjct: 220 gtggtggtcaacgagggcgaagaggacg 247

---

>gb|AF276746.1|AF276746 Spathiphyllum clevelandii phytochrome C (PHYC) gene, partial cds
          Length = 1394

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 79/92 (85%)
 Strand = Plus / Plus

                                                                       
Query: 98  gagccttatctcggcctgcactatccagccactgatatccctcaagcagctaggtttctg 157
           |||||||| ||||| ||||| ||||| || ||||| |||||||| ||  |||| ||||||
Sbjct: 298 gagccttacctcggtctgcattatcctgctactgacatccctcaggcttctagatttctg 357

                                           
Query: 158 ttcatgaagaacaaagtgcggatgatttgcga 189
           |||||||||||||| ||| ||||||| |||||
Sbjct: 358 ttcatgaagaacaaggtgaggatgatatgcga 389

---

>emb|AM233921.1| Agalinis fasciculata partial phya gene for phytochrome A, clone
           1661_1_3
          Length = 1161

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 115/140 (82%)
 Strand = Plus / Plus

                                                                       
Query: 44  ttccatgaagataaccatggcgaggtctttgccgagatcacaaagcctggccttgagcct 103
           |||||||| ||| | || |||||||| ||  | |||||||| || || |||||||| || 
Sbjct: 190 ttccatgacgatgatcacggcgaggttttatctgagatcacgaaaccgggccttgaacca 249

                                                                       
Query: 104 tatctcggcctgcactatccagccactgatatccctcaagcagctaggtttctgttcatg 163
           ||| | ||| ||||||||||||| ||||| |||||||| || ||  ||||| ||||||| 
Sbjct: 250 tatgtgggcttgcactatccagcgactgacatccctcaggcggcccggtttttgttcata 309

                               
Query: 164 aagaacaaagtgcggatgat 183
           ||||||||||| ||||||||
Sbjct: 310 aagaacaaagtccggatgat 329



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                   
Query: 273 cacacagctgtcaccttcagtatatggagaacatgaactc 312
           |||||||||||||  | |||||||||||||||||||||||
Sbjct: 419 cacacagctgtcatttgcagtatatggagaacatgaactc 458

---

>gb|U78844.1|PRU78844 Platycyamus regnellii phytochrome A (PHYA) gene, partial cds
          Length = 400

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 94/112 (83%)
 Strand = Plus / Plus

                                                                       
Query: 24  atagggttatggcttacaagttccatgaagataaccatggcgaggtctttgccgagatca 83
           ||||||| ||||| || ||||| ||||||||| | ||||| |||||  |||| ||||| |
Sbjct: 1   atagggtgatggcgtataagtttcatgaagatgatcatggggaggtgattgctgagataa 60

                                                               
Query: 84  caaagcctggccttgagccttatctcggcctgcactatccagccactgatat 135
           ||||||| ||||||||||| ||| | ||  ||||||| ||||||||||||||
Sbjct: 61  caaagccaggccttgagccatatatgggtttgcactacccagccactgatat 112

---

>gb|U78830.1|MSU78830 Myrospermum sousanum phytochrome A (PHYA) gene, partial cds
          Length = 630

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 97/116 (83%)
 Strand = Plus / Plus

                                                                       
Query: 20  tatgatagggttatggcttacaagttccatgaagataaccatggcgaggtctttgccgag 79
           ||||| ||||||||||| || ||||| ||||| ||| | ||||| |||||  | || |||
Sbjct: 1   tatgacagggttatggcgtataagtttcatgaggatgatcatggggaggtggtcgctgag 60

                                                                   
Query: 80  atcacaaagcctggccttgagccttatctcggcctgcactatccagccactgatat 135
           ||||||||| | ||||| ||||| ||||| ||  ||||||||||||||||||||||
Sbjct: 61  atcacaaagtcaggcctagagccatatctgggtttgcactatccagccactgatat 116

---

>gb|AY348568.1| Orobanche minor phytochrome A (phyA) mRNA, complete cds
          Length = 3531

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 118/144 (81%)
 Strand = Plus / Plus

                                                                       
Query: 47  catgaagataaccatggcgaggtctttgccgagatcacaaagcctggccttgagccttat 106
           ||||||||| | ||||| ||||| ||| ||||||||||||| || ||||| ||||| |||
Sbjct: 744 catgaagatgatcatggagaggtttttaccgagatcacaaaaccgggcctcgagccgtat 803

                                                                       
Query: 107 ctcggcctgcactatccagccactgatatccctcaagcagctaggtttctgttcatgaag 166
            | |||||||| |||||||| || ||||| ||||| |||||  | ||| | |||||||||
Sbjct: 804 gtgggcctgcattatccagcgacggatattcctcaggcagcccgttttttattcatgaag 863

                                   
Query: 167 aacaaagtgcggatgatttgcgat 190
           || || ||| | ||||| ||||||
Sbjct: 864 aataaggtgagaatgatatgcgat 887

---

>gb|AY345120.1| Cyrtosia septentrionalis phytochrome A (phyA) mRNA, complete cds
          Length = 4046

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 126/155 (81%)
 Strand = Plus / Plus

                                                                        
Query: 17   gggtatgatagggttatggcttacaagttccatgaagataaccatggcgaggtctttgcc 76
            ||||||||||| ||||||| ||||||||||||||||||| | ||||| || || ||||| 
Sbjct: 1136 gggtatgatagagttatggtttacaagttccatgaagatgatcatggggaagtatttgct 1195

                                                                        
Query: 77   gagatcacaaagcctggccttgagccttatctcggcctgcactatccagccactgatatc 136
            || ||||||||||| || || ||  | ||  | ||  | || ||||| || ||||| || 
Sbjct: 1196 gaaatcacaaagccaggactagaatcatactttgggttacattatccggctactgacata 1255

                                               
Query: 137  cctcaagcagctaggtttctgttcatgaagaacaa 171
            ||||| || || |||||||||||||||||||||||
Sbjct: 1256 cctcaggctgcaaggtttctgttcatgaagaacaa 1290

---

>gb|AF276750.1|AF276750 Xanthorhiza simplicissima phytochrome A (PHYA) gene, partial cds
          Length = 1394

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 81/95 (85%)
 Strand = Plus / Plus

                                                                       
Query: 77  gagatcacaaagcctggccttgagccttatctcggcctgcactatccagccactgatatc 136
           |||||||||||||| ||||| ||||| ||||| || ||||| ||||| ||||| || |||
Sbjct: 277 gagatcacaaagccaggcctggagccctatctgggtctgcattatccggccacagacatc 336

                                              
Query: 137 cctcaagcagctaggtttctgttcatgaagaacaa 171
           ||||| || ||  |||| |||||||||||||||||
Sbjct: 337 cctcaggctgcgcggttcctgttcatgaagaacaa 371



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                         
Query: 273 cacacagctgtcaccttcagtatatggagaacatgaactcgattgc 318
           |||||||||| ||| | |||||||||||||||||||| || |||||
Sbjct: 473 cacacagctgccacttacagtatatggagaacatgaattccattgc 518

---

>gb|AF276748.1|AF276748 Tetracentron sinense phytochrome A (PHYA) gene, partial cds
          Length = 1394

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 81/95 (85%)
 Strand = Plus / Plus

                                                                       
Query: 77  gagatcacaaagcctggccttgagccttatctcggcctgcactatccagccactgatatc 136
           |||||||||||||| ||||| ||||| ||||| || ||||| ||||| ||||| || |||
Sbjct: 277 gagatcacaaagccaggcctggagccctatctgggtctgcattatccggccacagacatc 336

                                              
Query: 137 cctcaagcagctaggtttctgttcatgaagaacaa 171
           ||||| || ||  |||| |||||||||||||||||
Sbjct: 337 cctcaggctgcgcggttcctgttcatgaagaacaa 371



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                         
Query: 273 cacacagctgtcaccttcagtatatggagaacatgaactcgattgc 318
           |||||||||| ||| | |||||||||||||||||||| || |||||
Sbjct: 473 cacacagctgccacttacagtatatggagaacatgaattccattgc 518

---

>emb|AM233977.1| Lindenbergia muraria partial phya gene for phytochrome A, clone
           1552_7_1
          Length = 1833

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 96/115 (83%)
 Strand = Plus / Plus

                                                                       
Query: 75  ccgagatcacaaagcctggccttgagccttatctcggcctgcactatccagccactgata 134
           |||||||||| ||||| ||||| ||||||||  |||| || || ||||| ||||| ||||
Sbjct: 275 ccgagatcacgaagccgggcctggagccttacgtcgggcttcattatccggccacagata 334

                                                                  
Query: 135 tccctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgatttgcga 189
           | || || |||||  ||||||||||||||||||| || ||| ||||||| |||||
Sbjct: 335 ttccccaggcagcccggtttctgttcatgaagaataaggtgaggatgatatgcga 389

---

>emb|AM233970.1| Lathraea clandestina partial phya gene for phytochrome A, clone
           1595_4a_1
          Length = 1164

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 102/123 (82%)
 Strand = Plus / Plus

                                                                       
Query: 68  gtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcactatccagcc 127
           |||||| |||||||||| || || || |||||||||||| | ||| |||| ||||| || 
Sbjct: 205 gtctttaccgagatcaccaaaccgggacttgagccttatgtgggcttgcattatccggct 264

                                                                       
Query: 128 actgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgatttgc 187
           || |||||||| || |||||| | |||||||| |||||||| |||||  ||||||| |||
Sbjct: 265 acggatatcccgcaggcagctcgttttctgtttatgaagaataaagtcaggatgatatgc 324

              
Query: 188 gat 190
           |||
Sbjct: 325 gat 327



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                         
Query: 273 cacacagctgtcaccttcagtatatggagaacatgaactcgattgc 318
           |||||| ||| || || ||||| |||||||||||||||||||||||
Sbjct: 410 cacacatctgccatctgcagtacatggagaacatgaactcgattgc 455

---

>emb|AM233967.1| Hyobanche sanguinea partial phya gene for phytochrome A, clone
           1428_5_3
          Length = 1782

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 144/179 (80%)
 Strand = Plus / Plus

                                                                       
Query: 11  cttacagggtatgatagggttatggcttacaagttccatgaagataaccatggcgaggtc 70
           |||||||| |||||  |||| ||||  |||| |||||| || ||||||||||| ||||| 
Sbjct: 139 cttacaggctatgaccgggtgatggtctacaggttccacgatgataaccatggggaggtt 198

                                                                       
Query: 71  tttgccgagatcacaaagcctggccttgagccttatctcggcctgcactatccagccact 130
           ||| |||||||||||| ||| ||||||||||| ||    ||||| ||||| || ||||||
Sbjct: 199 tttaccgagatcacaaggccgggccttgagccatacgcgggccttcactacccggccact 258

                                                                      
Query: 131 gatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgatttgcga 189
           || || || || || ||  | || || |||||||||||||| || |||||||| |||||
Sbjct: 259 gacattccccaggcggcccgcttcctattcatgaagaacaaggtccggatgatatgcga 317



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 275 cacagctgtcaccttcagtatatggagaacatgaactcgattgcatccct 324
           |||||||| ||||| |  || ||||||||||||||||||||||| |||||
Sbjct: 403 cacagctgccacctgcgctacatggagaacatgaactcgattgcgtccct 452

---

>emb|AM234016.1| Rhynchocorys orientalis partial phya gene for phytochrome A, clone
           1660_8b_1
          Length = 1836

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 147/183 (80%)
 Strand = Plus / Plus

                                                                       
Query: 8   gaacttacagggtatgatagggttatggcttacaagttccatgaagataaccatggcgag 67
           ||||| ||||| ||||||||||| ||| | || ||||| ||||| ||| | || || |||
Sbjct: 208 gaactcacaggttatgatagggtgatgacatataagtttcatgaggatgatcacggagag 267

                                                                       
Query: 68  gtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcactatccagcc 127
           ||  || | ||||||||||| || ||||||||||||||| | ||  |||| ||||| || 
Sbjct: 268 gttcttactgagatcacaaaaccgggccttgagccttatgtgggtttgcattatccggct 327

                                                                       
Query: 128 actgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgatttgc 187
           || |||||||| || |||||| | |||||||| |||||||| || ||  ||||||| |||
Sbjct: 328 acggatatcccacaggcagctcgttttctgtttatgaagaataaggtcaggatgatatgc 387

              
Query: 188 gat 190
           |||
Sbjct: 388 gat 390



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                         
Query: 273 cacacagctgtcaccttcagtatatggagaacatgaactcgattgc 318
           |||||||||| || || ||||| |||||||||||||||||||||||
Sbjct: 473 cacacagctgccatctgcagtacatggagaacatgaactcgattgc 518

---

>gb|AF004793.1|AF004793 Millettia grandis phytochrome A1 (PHYA1) gene, partial cds
          Length = 609

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 90/107 (84%)
 Strand = Plus / Plus

                                                                       
Query: 32  atggcttacaagttccatgaagataaccatggcgaggtctttgccgagatcacaaagcct 91
           |||||||| || || ||||| ||| | ||||| |||||  |||| ||| ||| |||||| 
Sbjct: 1   atggcttataaatttcatgaggatgatcatggggaggtgattgctgagctcaaaaagcca 60

                                                          
Query: 92  ggccttgagccttatctcggcctgcactatccagccactgatatccc 138
           ||||| ||||| ||||| ||| |||||||||||||||||||||||||
Sbjct: 61  ggcctagagccatatcttggcttgcactatccagccactgatatccc 107



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 296 atggagaacatgaactcgattgcatcccttgtcatggctgttgtggttaatga 348
           |||||||||||||| || | ||| ||| | || |||||||||||||| |||||
Sbjct: 265 atggagaacatgaattctagtgcttccttggttatggctgttgtggtcaatga 317

---

>gb|AY234830.1| Zea mays cultivar B73 phytochrome C2 apoprotein (phyC2) gene,
            complete cds
          Length = 5930

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 74/86 (86%)
 Strand = Plus / Plus

                                                                        
Query: 98   gagccttatctcggcctgcactatccagccactgatatccctcaagcagctaggtttctg 157
            ||||| ||||| ||||||||||| |||||||| || ||||| || ||  | |||||||||
Sbjct: 1229 gagccgtatcttggcctgcactacccagccaccgacatcccgcaggcgtccaggtttctg 1288

                                      
Query: 158  ttcatgaagaacaaagtgcggatgat 183
            || |||||||||||| ||||||||||
Sbjct: 1289 tttatgaagaacaaaatgcggatgat 1314

---

>gb|AF004781.1| Xeroderris stuhlmannii phytochrome A1 (PHYA1) gene, partial cds
          Length = 600

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 62/70 (88%)
 Strand = Plus / Plus

                                                                       
Query: 72  ttgccgagatcacaaagcctggccttgagccttatctcggcctgcactatccagccactg 131
           |||| ||| ||| |||||||||||| ||||||||||| ||  ||||||||||||||||||
Sbjct: 26  ttgctgaggtcaaaaagcctggcctagagccttatctgggtttgcactatccagccactg 85

                     
Query: 132 atatccctca 141
           |||| |||||
Sbjct: 86  atattcctca 95

---

>dbj|AB206946.1| Aristolochia praevenosa PHYA gene for phytochrome A, partial cds
          Length = 703

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 47/50 (94%)
 Strand = Plus / Plus

                                                             
Query: 137 cctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgatttg 186
           |||||||| |||||||||||||||||||||||||| || |||||||||||
Sbjct: 5   cctcaagctgctaggtttctgttcatgaagaacaaggttcggatgatttg 54



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 66/80 (82%)
 Strand = Plus / Plus

                                                                       
Query: 281 tgtcaccttcagtatatggagaacatgaactcgattgcatcccttgtcatggctgttgtg 340
           |||||||| ||||||||| ||||||||   || ||||| || ||||||||||| || || 
Sbjct: 149 tgtcacctgcagtatatgaagaacatgtcttccattgcttctcttgtcatggcagtggtt 208

                               
Query: 341 gttaatgagagtgaagagga 360
           || |||||  ||||||||||
Sbjct: 209 gtgaatgaaggtgaagagga 228

---

>dbj|AB206940.1| Aristolochia serpentaria PHYA gene for phytochrome A, partial cds,
           isolate:2
          Length = 703

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 47/50 (94%)
 Strand = Plus / Plus

                                                             
Query: 137 cctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgatttg 186
           |||||||| |||||||||||||||||||||||||| || |||||||||||
Sbjct: 5   cctcaagctgctaggtttctgttcatgaagaacaaggttcggatgatttg 54

---

>dbj|AB206939.1| Aristolochia serpentaria PHYA gene for phytochrome A, partial cds,
           isolate:1
          Length = 703

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 47/50 (94%)
 Strand = Plus / Plus

                                                             
Query: 137 cctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgatttg 186
           |||||||| |||||||||||||||||||||||||| || |||||||||||
Sbjct: 5   cctcaagctgctaggtttctgttcatgaagaacaaggttcggatgatttg 54

---

>dbj|AB206937.1| Aristolochia tomentosa PHYA gene for phytochrome A, partial cds,
           isolate:1
          Length = 703

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 47/50 (94%)
 Strand = Plus / Plus

                                                             
Query: 137 cctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgatttg 186
           |||||||| |||||||||||||||||||||||||| || |||||||||||
Sbjct: 5   cctcaagctgctaggtttctgttcatgaagaacaaggttcggatgatttg 54



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 88/110 (80%)
 Strand = Plus / Plus

                                                                       
Query: 251 tgtggttcatcactcagggcagcacacagctgtcaccttcagtatatggagaacatgaac 310
           ||||||||  |||| |||||  |||| || |||||||| ||||||||| |||| |||   
Sbjct: 119 tgtggttccacactgagggccccacatagttgtcacctgcagtatatgaagaatatgggt 178

                                                             
Query: 311 tcgattgcatcccttgtcatggctgttgtggttaatgagagtgaagagga 360
           || ||||| || ||||||||||| || || || |||||  ||||||||||
Sbjct: 179 tccattgcttctcttgtcatggcagtggttgtgaatgaaggtgaagagga 228

---

>dbj|AB206933.1| Aristolochia kaempferi PHYA gene for phytochrome A, partial cds,
           isolate:2
          Length = 688

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 47/50 (94%)
 Strand = Plus / Plus

                                                             
Query: 137 cctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgatttg 186
           |||||||| |||||||||||||||||||||||||| || |||||||||||
Sbjct: 5   cctcaagctgctaggtttctgttcatgaagaacaaggttcggatgatttg 54

---

>dbj|AB206927.1| Aristolochia convolvulacea PHYA gene for phytochrome A, partial
           cds, isolate:2
          Length = 703

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 47/50 (94%)
 Strand = Plus / Plus

                                                             
Query: 137 cctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgatttg 186
           |||||||| |||||||||||||||||||||||||| || |||||||||||
Sbjct: 5   cctcaagctgctaggtttctgttcatgaagaacaaggttcggatgatttg 54

---

>dbj|AB206926.1| Aristolochia convolvulacea PHYA gene for phytochrome A, partial
           cds, isolate:1
          Length = 703

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 47/50 (94%)
 Strand = Plus / Plus

                                                             
Query: 137 cctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgatttg 186
           |||||||| |||||||||||||||||||||||||| || |||||||||||
Sbjct: 5   cctcaagctgctaggtttctgttcatgaagaacaaggttcggatgatttg 54

---

>dbj|AB206923.1| Aristolochia arborea PHYA gene for phytochrome A, partial cds,
           isolate:2
          Length = 700

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 47/50 (94%)
 Strand = Plus / Plus

                                                             
Query: 137 cctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgatttg 186
           |||||||| |||||||||||||||||||||||||| || |||||||||||
Sbjct: 5   cctcaagctgctaggtttctgttcatgaagaacaaggttcggatgatttg 54

---

>dbj|AB206922.1| Aristolochia arborea PHYA gene for phytochrome A, partial cds,
           isolate:1
          Length = 703

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 47/50 (94%)
 Strand = Plus / Plus

                                                             
Query: 137 cctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgatttg 186
           |||||||| |||||||||||||||||||||||||| || |||||||||||
Sbjct: 5   cctcaagctgctaggtttctgttcatgaagaacaaggttcggatgatttg 54



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 88/110 (80%)
 Strand = Plus / Plus

                                                                       
Query: 251 tgtggttcatcactcagggcagcacacagctgtcaccttcagtatatggagaacatgaac 310
           ||||||||  |||| |||||  |||| || |||||||| ||||||||| |||| ||| | 
Sbjct: 119 tgtggttccacactgagggcctcacatagttgtcacctgcagtatatgaagaatatggat 178

                                                             
Query: 311 tcgattgcatcccttgtcatggctgttgtggttaatgagagtgaagagga 360
           ||  |||| || ||||||||||| || || || |||||  ||||||||||
Sbjct: 179 tccgttgcttctcttgtcatggcagtggttgtgaatgaaggtgaagagga 228

---

>gb|AF190092.1|AF190092 Lactoris fernandeziana phytochrome C (PHYC) gene, partial cds
          Length = 1023

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 77/90 (85%)
 Strand = Plus / Plus

                                                                       
Query: 101 ccttatctcggcctgcactatccagccactgatatccctcaagcagctaggtttctgttc 160
           |||||||||||| |||||||||| || |||||||| ||||||||  | |||||||| |||
Sbjct: 247 ccttatctcggcttgcactatcctgctactgatattcctcaagcttcgaggtttctattc 306

                                         
Query: 161 atgaagaacaaagtgcggatgatttgcgat 190
           | |||||| || ||| ||||||| ||||||
Sbjct: 307 acgaagaataaggtgaggatgatatgcgat 336



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 14  acagggtatgatagggttatggcttacaagttccatgaaga 54
           ||||| ||||||||||| ||||||||||| || ||||||||
Sbjct: 160 acaggttatgatagggtgatggcttacaaatttcatgaaga 200

---

>emb|AM233922.1| Agalinis purpurea partial phya gene for phytochrome A, clone
           717_3_1
          Length = 1371

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 44/46 (95%)
 Strand = Plus / Plus

                                                         
Query: 273 cacacagctgtcaccttcagtatatggagaacatgaactcgattgc 318
           |||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 473 cacacagctgtcacttgcagtatatggagaacatgaactcgattgc 518



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 114/140 (81%)
 Strand = Plus / Plus

                                                                       
Query: 44  ttccatgaagataaccatggcgaggtctttgccgagatcacaaagcctggccttgagcct 103
           |||||||| ||| | || |||||||| ||  | |||||||| || || |||||||| || 
Sbjct: 244 ttccatgacgatgatcacggcgaggttttatctgagatcacgaaaccgggccttgaacca 303

                                                                       
Query: 104 tatctcggcctgcactatccagccactgatatccctcaagcagctaggtttctgttcatg 163
           ||| | ||| |||||||||| || ||||| |||||||| || ||  ||||| ||||||| 
Sbjct: 304 tatgtgggcttgcactatccggctactgacatccctcaggcggcccggtttttgttcata 363

                               
Query: 164 aagaacaaagtgcggatgat 183
           ||||||||||| ||||||||
Sbjct: 364 aagaacaaagtccggatgat 383

---

>emb|AM233974.1| Lathraea squamaria partial phya gene for phytochrome A, clone
           1595_5a_1
          Length = 1158

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 95/114 (83%)
 Strand = Plus / Plus

                                                                       
Query: 77  gagatcacaaagcctggccttgagccttatctcggcctgcactatccagccactgatatc 136
           |||||||| || || ||||||||||| ||| | ||| |||| ||||| || || ||||||
Sbjct: 214 gagatcactaaaccgggccttgagccctatgtgggcttgcattatccggctacggatatc 273

                                                                 
Query: 137 cctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgatttgcgat 190
           |||||||||||| | |||||||| |||||||| || ||  ||||||| ||||||
Sbjct: 274 cctcaagcagctcgttttctgtttatgaagaataatgtcaggatgatatgcgat 327



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                         
Query: 273 cacacagctgtcaccttcagtatatggagaacatgaactcgattgc 318
           |||||||||| || || ||||| ||||||| |||||||||||||||
Sbjct: 410 cacacagctgccatctgcagtacatggagagcatgaactcgattgc 455

---

>emb|AM233956.1| Escobedia grandiflora partial phya gene for phytochrome A, clone
           1618_3b_1
          Length = 1827

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 110/134 (82%)
 Strand = Plus / Plus

                                                                       
Query: 38  tacaagttccatgaagataaccatggcgaggtctttgccgagatcacaaagcctggcctt 97
           |||| ||||||||| ||| ||||||| ||||| ||||| |||||||| | ||  ||||| 
Sbjct: 235 tacaggttccatgacgatgaccatggggaggtgtttgctgagatcacgaggcggggcctc 294

                                                                       
Query: 98  gagccttatctcggcctgcactatccagccactgatatccctcaagcagctaggtttctg 157
           ||| | ||| | ||||||||||| ||||||||||| |||||||| || ||  | |  |||
Sbjct: 295 gagtcatatgtgggcctgcactacccagccactgacatccctcaggctgcccgctacctg 354

                         
Query: 158 ttcatgaagaacaa 171
           ||||||||||||||
Sbjct: 355 ttcatgaagaacaa 368



 Score = 46.1 bits (23), Expect = 0.097
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 293 tatatggagaacatgaactcgat 315
           |||||||||||||||||||||||
Sbjct: 490 tatatggagaacatgaactcgat 512

---

>emb|AM234006.1| Pedicularis kansuensis partial phya gene for phytochrome A, clone
           1439_3_3
          Length = 1833

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 122/150 (81%)
 Strand = Plus / Plus

                                                                       
Query: 41  aagttccatgaagataaccatggcgaggtctttgccgagatcacaaagcctggccttgag 100
           ||||||||||| ||| | ||||||||||| ||  ||||||||||||| || ||||| || 
Sbjct: 241 aagttccatgacgatgatcatggcgaggtattatccgagatcacaaaaccgggcctcgaa 300

                                                                       
Query: 101 ccttatctcggcctgcactatccagccactgatatccctcaagcagctaggtttctgttc 160
           || ||| | ||| |||| ||||| || |||||||| ||||| || ||  | ||| |||||
Sbjct: 301 ccgtatgtaggcttgcattatccggcgactgatattcctcaggcggcccgatttttgttc 360

                                         
Query: 161 atgaagaacaaagtgcggatgatttgcgat 190
           ||||||||||| ||  ||||||| ||||||
Sbjct: 361 atgaagaacaaggtcaggatgatatgcgat 390



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 275 cacagctgtcaccttcagtatatggagaacatgaactcgattgc 318
           |||||||| ||| | ||||| |||||||||| ||||||||||||
Sbjct: 475 cacagctgccacttgcagtacatggagaacacgaactcgattgc 518

---

>emb|AM234000.1| Parentucellia viscosa partial phya gene for phytochrome A, clone
           1515_1_4
          Length = 1830

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 146/182 (80%)
 Strand = Plus / Plus

                                                                       
Query: 8   gaacttacagggtatgatagggttatggcttacaagttccatgaagataaccatggcgag 67
           ||||| ||||| ||||||||||| |||  ||| ||||| || || ||| | || || |||
Sbjct: 208 gaactcacaggttatgatagggtgatgatttataagtttcacgatgatgatcacggagag 267

                                                                       
Query: 68  gtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcactatccagcc 127
           ||  || | ||||||||||| || ||||||||||||||| | ||| |||| |||||||| 
Sbjct: 268 gttcttactgagatcacaaaaccgggccttgagccttatgtgggcttgcattatccagct 327

                                                                       
Query: 128 actgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgatttgc 187
           || ||||| || || |||||| | ||||||||||||| ||| || ||  ||||||| |||
Sbjct: 328 acggatataccgcaggcagctcgttttctgttcatgaggaataaggtcaggatgatatgc 387

             
Query: 188 ga 189
           ||
Sbjct: 388 ga 389



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                         
Query: 273 cacacagctgtcaccttcagtatatggagaacatgaactcgattgc 318
           |||||||||| || || ||||| |||||||||||||||||||||||
Sbjct: 473 cacacagctgccatctgcagtacatggagaacatgaactcgattgc 518

---

>gb|AF004801.1|AF004801 Pongamiopsis amygdalina phytochrome A1 (PHYA1) gene, partial cds
          Length = 621

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 62/70 (88%)
 Strand = Plus / Plus

                                                                       
Query: 72  ttgccgagatcacaaagcctggccttgagccttatctcggcctgcactatccagccactg 131
           |||| ||| ||| |||||||||||| ||||||||||| ||  ||||||||||||||||||
Sbjct: 47  ttgctgaggtcaaaaagcctggcctagagccttatctgggtttgcactatccagccactg 106

                     
Query: 132 atatccctca 141
           |||| |||||
Sbjct: 107 atattcctca 116

---

>gb|AF004800.1|AF004800 Lonchocarpus phaseolifolius phytochrome A1 (PHYA1) gene, partial
           cds
          Length = 620

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 62/70 (88%)
 Strand = Plus / Plus

                                                                       
Query: 72  ttgccgagatcacaaagcctggccttgagccttatctcggcctgcactatccagccactg 131
           |||| ||| ||| |||||||||||| ||||||||||| ||  ||||||||||||||||||
Sbjct: 47  ttgctgaggtcaaaaagcctggcctagagccttatctgggtttgcactatccagccactg 106

                     
Query: 132 atatccctca 141
           |||| |||||
Sbjct: 107 atattcctca 116

---

>gb|AF004790.1|AF004790 Piscidia piscipula phytochrome A (PHYA) gene, partial cds
          Length = 457

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 83/98 (84%)
 Strand = Plus / Plus

                                                                       
Query: 38  tacaagttccatgaagataaccatggcgaggtctttgccgagatcacaaagcctggcctt 97
           |||||||| ||||| ||| | ||||| |||||  |||| ||||| |||||||| ||||||
Sbjct: 5   tacaagtttcatgaggatgatcatggggaggtgattgctgagataacaaagccaggcctt 64

                                                 
Query: 98  gagccttatctcggcctgcactatccagccactgatat 135
           ||||| | ||| ||  ||||||||||||||||||||||
Sbjct: 65  gagccatgtctgggtttgcactatccagccactgatat 102

---

>gb|AF500522.1| Androstachys johnsonii phytochrome C (PHYC) gene, partial cds
          Length = 1174

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 79/93 (84%)
 Strand = Plus / Plus

                                                                       
Query: 98  gagccttatctcggcctgcactatccagccactgatatccctcaagcagctaggtttctg 157
           ||||||||||| || ||||| || ||||| |||||||| ||||||||  | ||||| || 
Sbjct: 244 gagccttatcttggactgcattacccagctactgatatacctcaagcttcgaggttcctc 303

                                            
Query: 158 ttcatgaagaacaaagtgcggatgatttgcgat 190
           |||||||| ||||| ||||||||||| ||||||
Sbjct: 304 ttcatgaaaaacaaggtgcggatgatatgcgat 336

---

>gb|AF190091.1|AF190091 Lactoris fernandeziana phytochrome A (PHYA) gene, partial cds
          Length = 1170

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 58/65 (89%)
 Strand = Plus / Plus

                                                                       
Query: 5   tttgaacttacagggtatgatagggttatggcttacaagttccatgaagataaccatggc 64
           |||||||||||||| ||||||||| | ||||| || ||||||||||||||| | ||||||
Sbjct: 130 tttgaacttacaggctatgataggatcatggcctataagttccatgaagatgatcatggc 189

                
Query: 65  gaggt 69
           |||||
Sbjct: 190 gaggt 194



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                       
Query: 248 ttgtgtggttcatcactcagggcagcacacagctgtcaccttcagtatatggagaacatg 307
           |||||||||||  |||| | |||  |||| || |||||||| ||||||||||||||||||
Sbjct: 373 ttgtgtggttccacactgaaggctccacatagttgtcacctgcagtatatggagaacatg 432



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 116 cactatccagccactgatatccctcaagcagctaggtttctgttcatgaagaacaa 171
           |||||||||||||| ||||||||||| ||| || | ||| | || |||||||||||
Sbjct: 241 cactatccagccacagatatccctcaggcatctcgctttttatttatgaagaacaa 296

---

>gb|AF190077.1|AF190077 Chloranthus spicatus phytochrome C (PHYC) gene, partial cds
          Length = 1191

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 76/89 (85%)
 Strand = Plus / Plus

                                                                       
Query: 98  gagccttatctcggcctgcactatccagccactgatatccctcaagcagctaggtttctg 157
           ||||||||||||||| |||| || || || || ||||||||||||||| | || ||||| 
Sbjct: 244 gagccttatctcggcttgcattacccggctaccgatatccctcaagcatcaagatttctt 303

                                        
Query: 158 ttcatgaagaacaaagtgcggatgatttg 186
           |||||||||||||| ||  ||||||||||
Sbjct: 304 ttcatgaagaacaaggttaggatgatttg 332

---

>emb|X98621.1|OVPHYTOGE O.vulgatum phytochrome gene
          Length = 572

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 79/93 (84%)
 Strand = Plus / Plus

                                                                       
Query: 94  ccttgagccttatctcggcctgcactatccagccactgatatccctcaagcagctaggtt 153
           ||||||||||||||| || |||||||||||||| ||||| |||||||||||  |  | ||
Sbjct: 44  ccttgagccttatcttggtctgcactatccagcgactgacatccctcaagcttcacgatt 103

                                            
Query: 154 tctgttcatgaagaacaaagtgcggatgatttg 186
            || ||||||||||||| |||| | ||||||||
Sbjct: 104 ccttttcatgaagaacagagtgagaatgatttg 136

---

>emb|X98620.1|AEPHYTOGE A.evecta phytochrome gene
          Length = 572

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 79/93 (84%)
 Strand = Plus / Plus

                                                                       
Query: 94  ccttgagccttatctcggcctgcactatccagccactgatatccctcaagcagctaggtt 153
           ||||||||||||||| || |||||||||||||| ||||| |||||||||||  |  | ||
Sbjct: 44  ccttgagccttatcttggtctgcactatccagcgactgacatccctcaagcttcacgatt 103

                                            
Query: 154 tctgttcatgaagaacaaagtgcggatgatttg 186
            || ||||||||||||| |||| | ||||||||
Sbjct: 104 ccttttcatgaagaacagagtgagaatgatttg 136

---

>emb|AM237453.1| Alonsoa sp. Wood 18362 partial phyA gene for phytochrome A,
           specimen voucher Wood 18362
          Length = 1818

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 67/77 (87%)
 Strand = Plus / Plus

                                                                       
Query: 114 tgcactatccagccactgatatccctcaagcagctaggtttctgttcatgaagaacaaag 173
           |||| ||||||||||| |||||||| || |||||| | ||| |||||||||||||||| |
Sbjct: 314 tgcattatccagccacggatatcccccaggcagctcgttttttgttcatgaagaacaagg 373

                            
Query: 174 tgcggatgatttgcgat 190
           || ||||||| ||||||
Sbjct: 374 tgaggatgatatgcgat 390

---

>emb|AM233981.1| Melampyrum pratense partial phya gene for phytochrome A, clone
           1538_6a_1
          Length = 1815

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 67/77 (87%)
 Strand = Plus / Plus

                                                                       
Query: 273 cacacagctgtcaccttcagtatatggagaacatgaactcgattgcatcccttgtcatgg 332
           |||||||||| || || ||||||||||||||||||||||||||||| || || || ||| 
Sbjct: 473 cacacagctgccatctgcagtatatggagaacatgaactcgattgcttctctggtgatgt 532

                            
Query: 333 ctgttgtggttaatgag 349
           | |||||||| ||||||
Sbjct: 533 cggttgtggtcaatgag 549

---

>emb|AM233979.1| Melampyrum carstiense partial phya gene for phytochrome A, clone
           1569_8_2
          Length = 1791

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 94/113 (83%)
 Strand = Plus / Plus

                                                                       
Query: 77  gagatcacaaagcctggccttgagccttatctcggcctgcactatccagccactgatatc 136
           ||||||||||| || |||||||||||||||   ||| |||| |||||||| || ||||||
Sbjct: 232 gagatcacaaaaccgggccttgagccttatgcgggcttgcattatccagctacggatatc 291

                                                                
Query: 137 cctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgatttgcga 189
           || |||||  || | |||||||| |||||||| || ||  |||||||||||||
Sbjct: 292 ccacaagcttctcgttttctgtttatgaagaataaggtaaggatgatttgcga 344



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                         
Query: 273 cacacagctgtcaccttcagtatatggagaacatgaactcgattgc 318
           |||||||||| ||  | |||||||||||||||||||||||||||||
Sbjct: 428 cacacagctgccatttgcagtatatggagaacatgaactcgattgc 473

---

>emb|AM233958.1| Euphrasia alsa partial phya gene for phytochrome A, clone 1718_6_1
          Length = 1861

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 94/113 (83%)
 Strand = Plus / Plus

                                                                       
Query: 77  gagatcacaaagcctggccttgagccttatctcggcctgcactatccagccactgatatc 136
           ||||||||||| || ||||||||||||||| | ||| |||| ||||| || || ||||||
Sbjct: 277 gagatcacaaaaccgggccttgagccttatgtgggcttgcattatccggctacggatatc 336

                                                                
Query: 137 cctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgatttgcga 189
           || || |||||| | |||||||| |||||||| || ||  ||||||| |||||
Sbjct: 337 ccgcaggcagctcgttttctgtttatgaagaataaggtcaggatgatatgcga 389



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                       
Query: 275 cacagctgtcaccttcagtatatggagaacatgaactcgattgc 318
           ||||||||||| || ||||| ||||||||||||||||| |||||
Sbjct: 475 cacagctgtcatctgcagtacatggagaacatgaactccattgc 518

---

>emb|AM233930.1| Bartsia trixago partial phya gene for phytochrome A, clone 1398_9_2
          Length = 1836

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 94/113 (83%)
 Strand = Plus / Plus

                                                                       
Query: 77  gagatcacaaagcctggccttgagccttatctcggcctgcactatccagccactgatatc 136
           ||||||||||| || ||||||||||||||| | ||| |||| |||||||| || ||||||
Sbjct: 277 gagatcacaaaaccgggccttgagccttatgtgggcttgcattatccagctacggatatc 336

                                                                
Query: 137 cctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgatttgcga 189
           || || |||||| | |||||||| |||| ||| || ||  ||||||| |||||
Sbjct: 337 ccgcaggcagctcgttttctgtttatgaggaataaggtcaggatgatatgcga 389



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                         
Query: 273 cacacagctgtcaccttcagtatatggagaacatgaactcgattgc 318
           |||||||||| || || ||||| |||||||||||||||||||||||
Sbjct: 473 cacacagctgccatctgcagtacatggagaacatgaactcgattgc 518

---

>emb|AM233924.1| Alectra sessiliflora partial phya gene for phytochrome A, clone
           1618_1a_2
          Length = 1857

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 148/185 (80%)
 Strand = Plus / Plus

                                                                       
Query: 5   tttgaacttacagggtatgatagggttatggcttacaagttccatgaagataaccatggc 64
           ||||| || ||||| |||||  |||| ||||  |||||||||||||| ||| | || || 
Sbjct: 205 tttgagctcacaggctatgaccgggtgatggtctacaagttccatgacgatgatcacggg 264

                                                                       
Query: 65  gaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcactatcca 124
           ||||| ||  ||||||| || ||||| ||||| ||||| |||   ||||||||||| |||
Sbjct: 265 gaggtgttcaccgagattacgaagccgggcctcgagccctatgcaggcctgcactaccca 324

                                                                       
Query: 125 gccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgatt 184
           ||||| || |||||||| || ||  | ||  |||||||||||||||| || |||||||| 
Sbjct: 325 gccacagacatccctcaggcggcccgcttcttgttcatgaagaacaaggttcggatgatc 384

                
Query: 185 tgcga 189
           |||||
Sbjct: 385 tgcga 389



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 58/67 (86%)
 Strand = Plus / Plus

                                                                       
Query: 267 gggcagcacacagctgtcaccttcagtatatggagaacatgaactcgattgcatcccttg 326
           ||||| |||||||||| ||||| |  || |||||||||||||||||||| || || ||||
Sbjct: 467 gggcaccacacagctgccacctgcgctacatggagaacatgaactcgatcgcgtcacttg 526

                  
Query: 327 tcatggc 333
           |||||||
Sbjct: 527 tcatggc 533

---

>emb|AM234030.1| Strobilanthes attenuata partial phya gene for phytochrome A, clone
           1553_6_2
          Length = 1821

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 93/109 (85%), Gaps = 2/109 (1%)
 Strand = Plus / Plus

                                                                       
Query: 83  acaaagcctggccttgagccttatctcggcct-gcactatccagccactgatatccctca 141
           |||||||||||||| |||||||| ||||| || ||| ||||||||||| |||||||| ||
Sbjct: 283 acaaagcctggcctcgagcctta-ctcgggcttgcattatccagccacagatatcccaca 341

                                                            
Query: 142 agcagctaggtttctgttcatgaagaacaaagtgcggatgatttgcgat 190
            || ||  ||||| ||||||||||||| || || |||||||| ||||||
Sbjct: 342 ggctgcccggtttttgttcatgaagaataaggtccggatgatatgcgat 390

---

>emb|AM234010.1| Phtheirospermum japonicum partial phya gene for phytochrome A,
           clone 1699_5_1
          Length = 1830

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 106/129 (82%)
 Strand = Plus / Plus

                                                                       
Query: 62  ggcgaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcactat 121
           |||||||| ||  ||||||||||||| || ||||| || || ||  | ||| ||||||||
Sbjct: 262 ggcgaggttttatccgagatcacaaaaccgggcctcgacccgtacgttggcttgcactat 321

                                                                       
Query: 122 ccagccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggatg 181
           || || || ||||||||||| |||||  ||||| |||||||||||||||| ||  |||||
Sbjct: 322 ccggcgaccgatatccctcaggcagcccggtttttgttcatgaagaacaaggtcaggatg 381

                    
Query: 182 atttgcgat 190
           || ||||||
Sbjct: 382 atatgcgat 390



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 290 cagtatatggagaacatgaactcgat 315
           ||||| ||||||||||||||||||||
Sbjct: 490 cagtacatggagaacatgaactcgat 515

---

>emb|AM233995.1| Orobanche raddeana partial phya gene for phytochrome A, clone
           1428_4_1
          Length = 1752

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 115/141 (81%)
 Strand = Plus / Plus

                                                                       
Query: 50  gaagataaccatggcgaggtctttgccgagatcacaaagcctggccttgagccttatctc 109
           |||||| | ||||| ||||| ||| ||||||||||||| || ||||| ||||| ||| | 
Sbjct: 178 gaagatgatcatggagaggtttttaccgagatcacaaaaccgggcctcgagccgtatgtg 237

                                                                       
Query: 110 ggcctgcactatccagccactgatatccctcaagcagctaggtttctgttcatgaagaac 169
           |||||||| |||||||| || ||||| ||||| |||||  | ||| | ||||||||||| 
Sbjct: 238 ggcctgcattatccagctacggatattcctcaggcagcccgttttttattcatgaagaat 297

                                
Query: 170 aaagtgcggatgatttgcgat 190
           || ||| | ||||| ||||||
Sbjct: 298 aaggtgagaatgatatgcgat 318



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                       
Query: 290 cagtatatggagaacatgaactcgattgcatcccttgtcatggctgttgtggttaatgag 349
           ||||| ||||| |||||||||||||| || || || || ||| | |||||||| ||||||
Sbjct: 418 cagtacatggaaaacatgaactcgatcgcgtctctggttatgtcggttgtggtcaatgag 477

                
Query: 350 agtga 354
            ||||
Sbjct: 478 ggtga 482

---

>gb|AF216113.1| Dicarpellum pancheri clone 2 phytochrome B (PHYB) gene, exon 1 and
           partial cds
          Length = 1095

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 72/84 (85%)
 Strand = Plus / Plus

                                                                       
Query: 101 ccttatctcggcctgcactatccagccactgatatccctcaagcagctaggtttctgttc 160
           |||||||| |||||||| |||||||| || ||||||||||| ||| | |||||| |||||
Sbjct: 198 ccttatcttggcctgcattatccagcaacggatatccctcaggcatcaaggtttttgttc 257

                                   
Query: 161 atgaagaacaaagtgcggatgatt 184
           | | |||||| |||| ||||||||
Sbjct: 258 aagcagaacagagtgaggatgatt 281

---

>gb|AF216112.1| Dicarpellum pancheri clone 1 phytochrome B (PHYB) gene, exon 1 and
           partial cds
          Length = 1097

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 72/84 (85%)
 Strand = Plus / Plus

                                                                       
Query: 101 ccttatctcggcctgcactatccagccactgatatccctcaagcagctaggtttctgttc 160
           |||||||| |||||||| |||||||| || ||||||||||| ||| | |||||| |||||
Sbjct: 194 ccttatcttggcctgcattatccagcaacggatatccctcaggcatcaaggtttttgttc 253

                                   
Query: 161 atgaagaacaaagtgcggatgatt 184
           | | |||||| |||| ||||||||
Sbjct: 254 aagcagaacagagtgaggatgatt 277

---

>emb|AM233983.1| Melasma scabrum partial phya gene for phytochrome A, clone 1322_5_4
          Length = 1398

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 123/152 (80%)
 Strand = Plus / Plus

                                                                       
Query: 38  tacaagttccatgaagataaccatggcgaggtctttgccgagatcacaaagcctggcctt 97
           ||||||||||| || ||| | || || ||||| || |||||||| || | ||| ||||| 
Sbjct: 238 tacaagttccacgacgatgatcacggggaggtgttcgccgagattacgaggccgggcctc 297

                                                                       
Query: 98  gagccttatctcggcctgcactatccagccactgatatccctcaagcagctaggtttctg 157
           ||||| |||   ||||||||||| ||||||||||| |||||||| || ||  | ||  ||
Sbjct: 298 gagccctatgcgggcctgcactacccagccactgacatccctcaggcggcccgcttcttg 357

                                           
Query: 158 ttcatgaagaacaaagtgcggatgatttgcga 189
           |||||||||||||| || |||||||| |||||
Sbjct: 358 ttcatgaagaacaaggtccggatgatctgcga 389



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 296 atggagaacatgaactcgattgcatcccttgtcatg 331
           ||||||||||||||||| || || ||||| ||||||
Sbjct: 496 atggagaacatgaactccatcgcgtccctggtcatg 531

---

>emb|AM233971.1| Lathraea clandestina partial phya gene for phytochrome A, clone
           1410_6_1
          Length = 1836

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 96/116 (82%)
 Strand = Plus / Plus

                                                                       
Query: 75  ccgagatcacaaagcctggccttgagccttatctcggcctgcactatccagccactgata 134
           |||||||||| || || ||||||||||| ||  ||||| |||| ||||| || || ||||
Sbjct: 275 ccgagatcactaaaccgggccttgagccctacgtcggcttgcattatccggctacggata 334

                                                                   
Query: 135 tccctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgatttgcgat 190
           ||||||| |||||| | |||||||| |||||||| || ||  ||||||| ||||||
Sbjct: 335 tccctcaggcagctcgttttctgtttatgaagaataaggtcaggatgatatgcgat 390



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                         
Query: 273 cacacagctgtcaccttcagtatatggagaacatgaactcgattgc 318
           |||||||||| || || ||||| |||||||||||||||||||||||
Sbjct: 473 cacacagctgccatctgcagtacatggagaacatgaactcgattgc 518

---

>emb|AM233965.1| Hyobanche glabrata partial phya gene for phytochrome A, clone
           1428_6_1
          Length = 1788

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 123/152 (80%)
 Strand = Plus / Plus

                                                                       
Query: 38  tacaagttccatgaagataaccatggcgaggtctttgccgagatcacaaagcctggcctt 97
           |||| |||||| || ||||||||||| ||||| ||| |||||||||||| ||| ||||||
Sbjct: 166 tacaggttccacgatgataaccatggggaggtttttaccgagatcacaaggccgggcctt 225

                                                                       
Query: 98  gagccttatctcggcctgcactatccagccactgatatccctcaagcagctaggtttctg 157
           ||||| ||    ||||| ||||| || |||||||| || || || || ||  | || || 
Sbjct: 226 gagccatacgcgggccttcactacccggccactgacattccccaggcggcccgcttccta 285

                                           
Query: 158 ttcatgaagaacaaagtgcggatgatttgcga 189
           |||||||||||||| || |||||||| |||||
Sbjct: 286 ttcatgaagaacaaggtccggatgatatgcga 317



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 275 cacagctgtcaccttcagtatatggagaacatgaactcgattgcatccct 324
           |||||||| ||||| |  || ||||||||||||||||||||||| |||||
Sbjct: 403 cacagctgccacctgcgctacatggagaacatgaactcgattgcgtccct 452

---

>emb|AM233951.1| Cordylanthus ramosus partial phya gene for phytochrome A, clone
           1658_2_1
          Length = 1827

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 108/132 (81%)
 Strand = Plus / Plus

                                                                       
Query: 59  catggcgaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcac 118
           ||||||||||| ||  |||||||||||||||| |||||||| || ||| | ||  |||||
Sbjct: 259 catggcgaggttttgtccgagatcacaaagccaggccttgatccgtatgtgggtttgcac 318

                                                                       
Query: 119 tatccagccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcgg 178
           ||||| || || ||||| |||||||| ||  | ||| ||||||| |||||||| ||  ||
Sbjct: 319 tatccggcgaccgatattcctcaagcggcccgttttttgttcataaagaacaaggtcagg 378

                       
Query: 179 atgatttgcgat 190
           ||||| ||||||
Sbjct: 379 atgatatgcgat 390

---

>emb|AM234004.1| Pedicularis gyrorhyncha partial phya gene for phytochrome A, clone
           1411_13_3
          Length = 1836

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 117/144 (81%)
 Strand = Plus / Plus

                                                                       
Query: 47  catgaagataaccatggcgaggtctttgccgagatcacaaagcctggccttgagccttat 106
           ||||||||| | ||||||||||| ||  ||||||||||||| || ||||| || || |||
Sbjct: 247 catgaagatgatcatggcgaggtattatccgagatcacaaaaccgggcctcgaaccgtat 306

                                                                       
Query: 107 ctcggcctgcactatccagccactgatatccctcaagcagctaggtttctgttcatgaag 166
            | ||| |||| ||||| || |||||||| ||||| || ||  | ||| |||||||||||
Sbjct: 307 gtgggcttgcattatcccgcgactgatattcctcaggcggcccgatttttgttcatgaag 366

                                   
Query: 167 aacaaagtgcggatgatttgcgat 190
           ||||| ||  ||||||| ||||||
Sbjct: 367 aacaaggtcaggatgatatgcgat 390



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 275 cacagctgtcaccttcagtatatggagaacatgaactcgattgc 318
           |||||||| ||| | ||||| |||||||||| ||||||||||||
Sbjct: 475 cacagctgccacttgcagtacatggagaacacgaactcgattgc 518

---

>gb|U83270.1|DEU83270 Derris elliptica phytochrome A (PHYA) gene, exon 1, partial cds
          Length = 612

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 57/64 (89%)
 Strand = Plus / Plus

                                                                       
Query: 72  ttgccgagatcacaaagcctggccttgagccttatctcggcctgcactatccagccactg 131
           |||| ||||| |||||||| ||||||||||| ||||| ||  ||||||||||||||||||
Sbjct: 35  ttgctgagataacaaagccaggccttgagccatatctgggtttgcactatccagccactg 94

               
Query: 132 atat 135
           ||||
Sbjct: 95  atat 98

---

>gb|AY396715.1| Tofieldia calyculata phytochrome C (PHYC) gene, partial cds
          Length = 1182

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 71/83 (85%)
 Strand = Plus / Plus

                                                                       
Query: 101 ccttatctcggcctgcactatccagccactgatatccctcaagcagctaggtttctgttc 160
           |||||||| |||||||||||||| || |||||||| || |||||  | ||||||||||| 
Sbjct: 247 ccttatcttggcctgcactatcctgctactgatattccccaagcttcaaggtttctgttt 306

                                  
Query: 161 atgaagaacaaagtgcggatgat 183
           ||||| ||||||||  |||||||
Sbjct: 307 atgaaaaacaaagtcaggatgat 329

---

>gb|AY425089.1| Austrobuxus megacarpus PHYC (PHYC) gene, partial cds
          Length = 1174

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 71/83 (85%)
 Strand = Plus / Plus

                                                                       
Query: 101 ccttatctcggcctgcactatccagccactgatatccctcaagcagctaggtttctgttc 160
           |||||||| ||||||||||| ||||| || ||||| ||||||||| | ||||| || |||
Sbjct: 247 ccttatcttggcctgcactacccagctacggatatacctcaagcatcgaggttcctcttc 306

                                  
Query: 161 atgaagaacaaagtgcggatgat 183
           ||||| ||||| || ||||||||
Sbjct: 307 atgaaaaacaaggtacggatgat 329

---

>gb|AF216174.1| Tontelea attenuata clone 1 phytochrome B (PHYB) gene, exon 1 and
           partial cds
          Length = 737

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 74/87 (85%)
 Strand = Plus / Plus

                                                                       
Query: 98  gagccttatctcggcctgcactatccagccactgatatccctcaagcagctaggtttctg 157
           ||||||||| | || ||||| ||||| ||||| ||||||||||||||| | |||||| ||
Sbjct: 215 gagccttatattgggctgcattatccggccacagatatccctcaagcatcaaggtttttg 274

                                      
Query: 158 ttcatgaagaacaaagtgcggatgatt 184
           |||| | |||||| |||| ||||||||
Sbjct: 275 ttcaagcagaacagagtgaggatgatt 301

---

>gb|U08173.1|LEU08173 Lycopersicon esculentum phytochrome (PHYA), partial cds
          Length = 351

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Plus

                                                                      
Query: 290 cagtatatggagaacatgaactcgattgcatcccttgtcatggctgttgtggttaatga 348
           |||||||||||||||||||| || |||||||| ||||| ||||| |||||||| |||||
Sbjct: 163 cagtatatggagaacatgaattcaattgcatcacttgtaatggcagttgtggtcaatga 221



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 410 ctatggggccttgttgtttgccac 433
           ||||||||||| ||||||||||||
Sbjct: 277 ctatggggcctggttgtttgccac 300

---

>gb|S84872.1| Solanum tuberosum type A phytochrome (c-phyA) mRNA, complete cds
          Length = 3614

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Plus

                                                                       
Query: 290  cagtatatggagaacatgaactcgattgcatcccttgtcatggctgttgtggttaatga 348
            |||||||||||||||||||| || |||||||| ||||| ||||| |||||||| |||||
Sbjct: 1134 cagtatatggagaacatgaattcaattgcatcacttgtaatggcagttgtggtcaatga 1192



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 77  gagatcacaaagcctggccttgagcctta 105
           |||||||||||||||||||| ||||||||
Sbjct: 921 gagatcacaaagcctggcctcgagcctta 949

---

>gb|AF276751.1|AF276751 Xanthorhiza simplicissima phytochrome C (PHYC) gene, partial cds
          Length = 1173

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 71/83 (85%)
 Strand = Plus / Plus

                                                                       
Query: 101 ccttatctcggcctgcactatccagccactgatatccctcaagcagctaggtttctgttc 160
           |||||||| ||| |||| |||||||| |||||||| || |||||  |||||||||| || 
Sbjct: 247 ccttatctgggcttgcattatccagctactgatataccacaagcttctaggtttcttttt 306

                                  
Query: 161 atgaagaacaaagtgcggatgat 183
           ||||||||||||||  |||||||
Sbjct: 307 atgaagaacaaagttaggatgat 329

---

>gb|AF276710.1|AF276710 Akebia quinata phytochrome A (PHYA) gene, partial cds
          Length = 1394

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 134/167 (80%)
 Strand = Plus / Plus

                                                                       
Query: 5   tttgaacttacagggtatgatagggttatggcttacaagttccatgaagataaccatggc 64
           ||||| ||||| || ||||||||||| ||||| || ||||| || || ||| | ||||| 
Sbjct: 205 tttgagcttactggctatgatagggtgatggcctataagtttcacgatgatgatcatggg 264

                                                                       
Query: 65  gaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcactatcca 124
           |||||  |  | |||||||||||||| ||||| || || ||| | ||  |||| ||||||
Sbjct: 265 gaggttgtgtctgagatcacaaagccaggcctcgaaccctatttgggtttgcattatcca 324

                                                          
Query: 125 gccactgatatccctcaagcagctaggtttctgttcatgaagaacaa 171
           ||||| ||||| |||||||| ||| | || ||||| |||||||||||
Sbjct: 325 gccacggatattcctcaagctgctcgattcctgtttatgaagaacaa 371

---

>gb|AF190062.1|AF190062 Amborella trichopoda phytochrome A (PHYA) gene, partial cds
          Length = 1155

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 65/75 (86%)
 Strand = Plus / Plus

                                                                       
Query: 95  cttgagccttatctcggcctgcactatccagccactgatatccctcaagcagctaggttt 154
           |||||||||||| | || || || ||||||||||||||||| || ||||| || ||||||
Sbjct: 223 cttgagccttatttaggtcttcattatccagccactgatataccccaagctgccaggttt 282

                          
Query: 155 ctgttcatgaagaac 169
           || ||||||||||||
Sbjct: 283 ctattcatgaagaac 297

---

>gb|AF190061.1|AF190061 Acorus gramineus phytochrome C (PHYC) gene, partial cds
          Length = 1221

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 71/83 (85%)
 Strand = Plus / Plus

                                                                       
Query: 98  gagccttatctcggcctgcactatccagccactgatatccctcaagcagctaggtttctg 157
           ||||||||||| |||||||| ||||| ||||| ||||| || || ||| | |||||| ||
Sbjct: 277 gagccttatctgggcctgcattatcctgccacggatattccccaggcatcgaggtttttg 336

                                  
Query: 158 ttcatgaagaacaaagtgcggat 180
           |||||||||||||| ||| ||||
Sbjct: 337 ttcatgaagaacaaggtgaggat 359

---

>emb|X66784.1|NTPHYA1 N.tabacum Nt-PHYA-1 gene for type-A Phytochrome
          Length = 6180

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Plus

                                                                       
Query: 290  cagtatatggagaacatgaactcgattgcatcccttgtcatggctgttgtggttaatga 348
            |||||||||||||||||||  || |||||||||||||| ||||| |||||||| |||||
Sbjct: 2056 cagtatatggagaacatgagttcaattgcatcccttgtaatggcagttgtggtcaatga 2114



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 143/179 (79%)
 Strand = Plus / Plus

                                                                        
Query: 8    gaacttacagggtatgatagggttatggcttacaagttccatgaagataaccatggcgag 67
            ||||| ||||| ||||| ||||| ||| | || ||||| || || ||| | ||||| |||
Sbjct: 1774 gaactcacaggctatgacagggtgatgacgtataagtttcacgatgatgatcatggagag 1833

                                                                        
Query: 68   gtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcactatccagcc 127
            ||  | ||||||||||| |||||||||||||| ||||| || ||  | |||||||| || 
Sbjct: 1834 gtggtggccgagatcacgaagcctggccttgatccttaccttggtttacactatcctgct 1893

                                                                       
Query: 128  actgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgatttg 186
            || |||||||| ||||| ||  | ||| ||||||||||||| || || || ||||||||
Sbjct: 1894 acggatatcccacaagctgcacgctttttgttcatgaagaataaggtccgaatgatttg 1952

---

>emb|AJ001916.1|LEAJ1916 Lycopersicon esculentum mRNA for phytochrome A type 3
          Length = 3946

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Plus

                                                                       
Query: 290  cagtatatggagaacatgaactcgattgcatcccttgtcatggctgttgtggttaatga 348
            |||||||||||||||||||| || |||||||| ||||| ||||| |||||||| |||||
Sbjct: 1389 cagtatatggagaacatgaattcaattgcatcacttgtaatggcagttgtggtcaatga 1447



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                         
Query: 77   gagatcacaaagcctggccttgagcctta 105
            |||||||||||||||||||| ||||||||
Sbjct: 1176 gagatcacaaagcctggcctcgagcctta 1204



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 410  ctatggggccttgttgtttgccac 433
            ||||||||||| ||||||||||||
Sbjct: 1503 ctatggggcctggttgtttgccac 1526

---

>emb|AJ001915.1|LEAJ1915 Lycopersicon esculentum mRNA for phytochrome A, type 2
          Length = 3924

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Plus

                                                                       
Query: 290  cagtatatggagaacatgaactcgattgcatcccttgtcatggctgttgtggttaatga 348
            |||||||||||||||||||| || |||||||| ||||| ||||| |||||||| |||||
Sbjct: 1367 cagtatatggagaacatgaattcaattgcatcacttgtaatggcagttgtggtcaatga 1425



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                         
Query: 77   gagatcacaaagcctggccttgagcctta 105
            |||||||||||||||||||| ||||||||
Sbjct: 1154 gagatcacaaagcctggcctcgagcctta 1182



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 410  ctatggggccttgttgtttgccac 433
            ||||||||||| ||||||||||||
Sbjct: 1481 ctatggggcctggttgtttgccac 1504

---

>emb|AJ001914.1|LEAJ1914 Lycopersicon esculentum mRNA for phytochrome A, type 1
          Length = 3858

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Plus

                                                                       
Query: 290  cagtatatggagaacatgaactcgattgcatcccttgtcatggctgttgtggttaatga 348
            |||||||||||||||||||| || |||||||| ||||| ||||| |||||||| |||||
Sbjct: 1301 cagtatatggagaacatgaattcaattgcatcacttgtaatggcagttgtggtcaatga 1359



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                         
Query: 77   gagatcacaaagcctggccttgagcctta 105
            |||||||||||||||||||| ||||||||
Sbjct: 1088 gagatcacaaagcctggcctcgagcctta 1116



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 410  ctatggggccttgttgtttgccac 433
            ||||||||||| ||||||||||||
Sbjct: 1415 ctatggggcctggttgtttgccac 1438

---

>emb|AJ001913.1|LEAJ1913 Lycopersicon esculentum phyA gene (exons 1 to 4 and joined CDS)
          Length = 6623

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Plus

                                                                       
Query: 290  cagtatatggagaacatgaactcgattgcatcccttgtcatggctgttgtggttaatga 348
            |||||||||||||||||||| || |||||||| ||||| ||||| |||||||| |||||
Sbjct: 2476 cagtatatggagaacatgaattcaattgcatcacttgtaatggcagttgtggtcaatga 2534



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                         
Query: 77   gagatcacaaagcctggccttgagcctta 105
            |||||||||||||||||||| ||||||||
Sbjct: 2263 gagatcacaaagcctggcctcgagcctta 2291



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 410  ctatggggccttgttgtttgccac 433
            ||||||||||| ||||||||||||
Sbjct: 2590 ctatggggcctggttgtttgccac 2613

---

>emb|AJ286679.1|MLA286679 Marattia laevis partial phy1 gene for phytochrome
          Length = 570

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 47/51 (92%)
 Strand = Plus / Plus

                                                              
Query: 94  ccttgagccttatctcggcctgcactatccagccactgatatccctcaagc 144
           ||||||||||||||| || |||||||||||||| ||||| |||||||||||
Sbjct: 42  ccttgagccttatcttggtctgcactatccagcgactgacatccctcaagc 92

---

>emb|AM234018.1| Scrophularia arguta partial phya gene for phytochrome A, clone
           1514_3b_1
          Length = 1821

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 143/179 (79%)
 Strand = Plus / Plus

                                                                       
Query: 5   tttgaacttacagggtatgatagggttatggcttacaagttccatgaagataaccatggc 64
           |||||||| || || || |||||||| ||| |||||||||| ||||| ||| | ||||| 
Sbjct: 205 tttgaactcacgggttacgatagggtgatgacttacaagtttcatgatgatgatcatggt 264

                                                                       
Query: 65  gaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcactatcca 124
           ||||| ||  | ||| |||| || || ||||| ||||||||    ||| |||| ||||| 
Sbjct: 265 gaggtgttcactgaggtcacgaaaccgggcctcgagccttacgcgggcttgcattatccc 324

                                                                      
Query: 125 gccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgat 183
           ||||| |||||||| ||||| ||  ||||  ||||||||||||| |||||| |||||||
Sbjct: 325 gccacggatatcccacaagcggcccggttcttgttcatgaagaataaagtgaggatgat 383



 Score = 46.1 bits (23), Expect = 0.097
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 296 atggagaacatgaactcgattgcatcc 322
           |||||||| ||||||||||||||||||
Sbjct: 496 atggagaatatgaactcgattgcatcc 522

---

>emb|AM234015.1| Rhinanthus minor partial phya gene for phytochrome A, clone
           1561_3_2
          Length = 1836

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 146/183 (79%)
 Strand = Plus / Plus

                                                                       
Query: 8   gaacttacagggtatgatagggttatggcttacaagttccatgaagataaccatggcgag 67
           ||||| ||||| ||||||||||| ||| | || ||||| || || ||| | || || |||
Sbjct: 208 gaactcacaggttatgatagggtcatgacatataagtttcacgaggatgatcacggggag 267

                                                                       
Query: 68  gtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcactatccagcc 127
           ||  || | |||||||| || || ||||||||||||||| | ||| |||| ||||| || 
Sbjct: 268 gttcttactgagatcactaaaccgggccttgagccttatgtgggcttgcattatccggct 327

                                                                       
Query: 128 actgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgatttgc 187
           || |||||||| || |||||| | |||||||| |||||||| || ||  ||||||| |||
Sbjct: 328 acggatatcccgcaggcagctcgttttctgtttatgaagaataaggtcaggatgatatgc 387

              
Query: 188 gat 190
           |||
Sbjct: 388 gat 390



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                         
Query: 273 cacacagctgtcaccttcagtatatggagaacatgaactcgattgc 318
           |||||||||| || || ||||| |||||||||||||||||||||||
Sbjct: 473 cacacagctgccatctgcagtacatggagaacatgaactcgattgc 518

---

>gb|U83269.1|CBU83269 Craibia brevicaudata phytochrome A (PHYA) gene, exon 1, partial cds
          Length = 594

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 71/83 (85%)
 Strand = Plus / Plus

                                                                       
Query: 59  catggcgaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcac 118
           ||||| |||||  |||| ||||| |||||||| ||||||||||  ||||| ||  |||||
Sbjct: 10  catggggaggtgattgctgagataacaaagccaggccttgagcaatatctgggtttgcac 69

                                  
Query: 119 tatccagccactgatatccctca 141
           ||||||||||||||||| |||||
Sbjct: 70  tatccagccactgatattcctca 92

---

>gb|AF004794.1|AF004794 Millettia grandis phytochrome A (PHYA) gene, partial cds
          Length = 617

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 86/103 (83%)
 Strand = Plus / Plus

                                                                       
Query: 33  tggcttacaagttccatgaagataaccatggcgaggtctttgccgagatcacaaagcctg 92
           ||||||| ||||| ||||| ||| | ||||| |||||  |||| ||| ||| || |||||
Sbjct: 1   tggcttataagtttcatgaggatgatcatggggaggtgattgctgaggtcaaaaggcctg 60

                                                      
Query: 93  gccttgagccttatctcggcctgcactatccagccactgatat 135
           |||| ||||||||||| ||  |||||||||| |||||||||||
Sbjct: 61  gcctagagccttatctgggtttgcactatccggccactgatat 103

---

>gb|AY234829.1| Zea mays cultivar B73 phytochrome C1 apoprotein (phyC1) gene,
            complete cds
          Length = 6176

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 73/86 (84%)
 Strand = Plus / Plus

                                                                        
Query: 98   gagccttatctcggcctgcactatccagccactgatatccctcaagcagctaggtttctg 157
            ||||| ||||| || |||||||| |||||||| || ||||| || ||  | ||||| |||
Sbjct: 2164 gagccgtatcttggactgcactacccagccaccgacatcccgcaggcgtccaggttcctg 2223

                                      
Query: 158  ttcatgaagaacaaagtgcggatgat 183
            || |||||||||||||||||||||||
Sbjct: 2224 tttatgaagaacaaagtgcggatgat 2249

---

>gb|AY425119.1| Micrantheum hexandrum PHYC (PHYC) gene, partial cds
          Length = 1174

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 73/86 (84%)
 Strand = Plus / Plus

                                                                       
Query: 98  gagccttatctcggcctgcactatccagccactgatatccctcaagcagctaggtttctg 157
           ||||||||||| ||||||||||| || || |||||||| ||||||||  | |||||  ||
Sbjct: 244 gagccttatcttggcctgcactacccggctactgatatacctcaagcttcaaggttcttg 303

                                     
Query: 158 ttcatgaagaacaaagtgcggatgat 183
           |||||||| ||||| || ||||||||
Sbjct: 304 ttcatgaaaaacaaggtacggatgat 329

---

>gb|AF216135.1| Maytenus undata clone 2 phytochrome B (PHYB) gene, exon 1 and
           partial cds
          Length = 737

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 130/162 (80%)
 Strand = Plus / Plus

                                                                       
Query: 23  gatagggttatggcttacaagttccatgaagataaccatggcgaggtctttgccgagatc 82
           ||||| |||||||  || ||||||||||||||| | || || |||||| | ||||||| |
Sbjct: 140 gatagagttatggtgtataagttccatgaagatgagcacggtgaggtcatggccgagagc 199

                                                                       
Query: 83  acaaagcctggccttgagccttatctcggcctgcactatccagccactgatatccctcaa 142
           |  | ||||| | | ||||||||| |||| ||||| ||||| ||  | ||||||||||| 
Sbjct: 200 aagaggcctgacttggagccttatatcgggctgcattatccggcatcagatatccctcag 259

                                                     
Query: 143 gcagctaggtttctgttcatgaagaacaaagtgcggatgatt 184
           ||| | |||||| |||||| | |||||| |||| ||||||||
Sbjct: 260 gcatcaaggtttttgttcaagcagaacagagtgaggatgatt 301

---

>gb|U08154.1|CDU08154 Ceratophyllum demersum phytochrome (PHYA) gene, partial cds
          Length = 312

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 82/98 (83%)
 Strand = Plus / Plus

                                                                       
Query: 236 tttgatattagcttgtgtggttcatcactcagggcagcacacagctgtcaccttcagtat 295
           |||||| ||| ||||||||||||  | || || ||  |||| || |||||| | ||||| 
Sbjct: 76  tttgatcttaccttgtgtggttctactctgagagccccacatagttgtcacttacagtac 135

                                                 
Query: 296 atggagaacatgaactcgattgcatcccttgtcatggc 333
           |||||||||||||| |||||||||||||| ||||||||
Sbjct: 136 atggagaacatgaattcgattgcatccctagtcatggc 173

---

>gb|U08170.1|HVU08170 Hordeum vulgare phytochrome (PHYC), partial cds
          Length = 333

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                             
Query: 134 atccctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgat 183
           ||||| |||||| | |||||||||||||||||||| ||||||||||||||
Sbjct: 10  atcccacaagcatccaggtttctgttcatgaagaataaagtgcggatgat 59

---

>dbj|AB206945.1| Aristolochia reniformis PHYA gene for phytochrome A, partial cds,
           isolate:2
          Length = 700

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 91/110 (82%)
 Strand = Plus / Plus

                                                                       
Query: 251 tgtggttcatcactcagggcagcacacagctgtcaccttcagtatatggagaacatgaac 310
           ||||||||  |||| |||||  |||| || |||||||| ||||||||||||||||||   
Sbjct: 119 tgtggttccacactgagggccccacatagttgtcacctgcagtatatggagaacatgtct 178

                                                             
Query: 311 tcgattgcatcccttgtcatggctgttgtggttaatgagagtgaagagga 360
           || ||||| || ||||||||||| || || || |||||| ||||||||||
Sbjct: 179 tccattgcttctcttgtcatggcagtggtcgtgaatgagggtgaagagga 228



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                             
Query: 137 cctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgatttg 186
           |||||||| ||| ||||||||||||||||||| || || |||||||||||
Sbjct: 5   cctcaagctgctcggtttctgttcatgaagaataaggtccggatgatttg 54

---

>dbj|AB206944.1| Aristolochia reniformis PHYA gene for phytochrome A, partial cds,
           isolate:1
          Length = 700

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 91/110 (82%)
 Strand = Plus / Plus

                                                                       
Query: 251 tgtggttcatcactcagggcagcacacagctgtcaccttcagtatatggagaacatgaac 310
           ||||||||  |||| |||||  |||| || |||||||| ||||||||||||||||||   
Sbjct: 119 tgtggttccacactgagggccccacatagttgtcacctgcagtatatggagaacatgtct 178

                                                             
Query: 311 tcgattgcatcccttgtcatggctgttgtggttaatgagagtgaagagga 360
           || ||||| || ||||||||||| || || || |||||| ||||||||||
Sbjct: 179 tccattgcttctcttgtcatggcagtggttgtgaatgagggtgaagagga 228



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                             
Query: 137 cctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgatttg 186
           |||||||| ||| ||||||||||||||||||| || || |||||||||||
Sbjct: 5   cctcaagctgctcggtttctgttcatgaagaataaggtccggatgatttg 54

---

>dbj|AB206938.1| Aristolochia tomentosa PHYA gene for phytochrome A, partial cds,
           isolate:2
          Length = 697

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                             
Query: 137 cctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgatttg 186
           ||||||||  ||||||||||||||||||||||||| || |||||||||||
Sbjct: 5   cctcaagcttctaggtttctgttcatgaagaacaaggttcggatgatttg 54

---

>dbj|AB206932.1| Aristolochia kaempferi PHYA gene for phytochrome A, partial cds,
           isolate:1
          Length = 697

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                             
Query: 137 cctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgatttg 186
           ||||||||  ||||||||||||||||||||||||| || |||||||||||
Sbjct: 5   cctcaagcttctaggtttctgttcatgaagaacaaggttcggatgatttg 54

---

>gb|AF276712.1|AF276712 Aristolochia grandiflora phytochrome A (PHYA) gene, partial cds
          Length = 1397

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 55/62 (88%)
 Strand = Plus / Plus

                                                                       
Query: 125 gccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgatt 184
           ||||| ||||| |||||||| ||| ||||||||||||||||||| || || |||||||||
Sbjct: 325 gccacagatatacctcaagctgctcggtttctgttcatgaagaataaggtccggatgatt 384

             
Query: 185 tg 186
           ||
Sbjct: 385 tg 386



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 89/110 (80%)
 Strand = Plus / Plus

                                                                       
Query: 251 tgtggttcatcactcagggcagcacacagctgtcaccttcagtatatggagaacatgaac 310
           ||||||||  |||| |||||  |||| || |||||||| ||| ||||| ||||||||   
Sbjct: 451 tgtggttccacactgagggccccacatagttgtcacctccagcatatgaagaacatgtct 510

                                                             
Query: 311 tcgattgcatcccttgtcatggctgttgtggttaatgagagtgaagagga 360
           || ||||| || ||||||||||| || || || |||||| ||||||||||
Sbjct: 511 tccattgcttctcttgtcatggcagtggtcgtgaatgagggtgaagagga 560

---

>emb|X75412.1|PCPHYA P.crispum phyA mRNA for phytochrome A
          Length = 3538

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 100/122 (81%)
 Strand = Plus / Plus

                                                                       
Query: 5   tttgaacttacagggtatgatagggttatggcttacaagttccatgaagataaccatggc 64
           |||||||||||||||||||||||||| |||||||| ||||| || || ||| | ||||| 
Sbjct: 688 tttgaacttacagggtatgatagggtgatggcttataagtttcacgatgatgatcatggg 747

                                                                       
Query: 65  gaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcactatcca 124
           |||||   ||| ||| | || ||||| ||||| ||||| ||| | ||| |||| ||||||
Sbjct: 748 gaggtgactgctgaggttacgaagccaggcctagagccatattttggcttgcattatcca 807

             
Query: 125 gc 126
           ||
Sbjct: 808 gc 809

---

>emb|AJ002525.1|DLAJ2525 Digitalis lanata mRNA for phytochrome A, partial
          Length = 886

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 91/110 (82%)
 Strand = Plus / Plus

                                                                       
Query: 65  gaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcactatcca 124
           ||||| ||| ||||||| ||||| || ||||||||||||||  | |||||||||||||| 
Sbjct: 5   gaggtttttaccgagattacaaaaccgggccttgagccttacgtgggcctgcactatccc 64

                                                             
Query: 125 gccactgatatccctcaagcagctaggtttctgttcatgaagaacaaagt 174
           || || ||||| || || || ||  | ||||||||||||||||| |||||
Sbjct: 65  gcgacagatattccacaggcggcccgctttctgttcatgaagaataaagt 114

---

>emb|AM233984.1| Melasma scabrum partial phya gene for phytochrome A, clone 1416_7_1
          Length = 1836

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 109/134 (81%)
 Strand = Plus / Plus

                                                                       
Query: 38  tacaagttccatgaagataaccatggcgaggtctttgccgagatcacaaagcctggcctt 97
           |||| ||||||||| ||| | ||||| ||||| | ||| |||||||| | ||| ||||| 
Sbjct: 238 tacaggttccatgacgatgatcatggggaggtgtatgctgagatcacgaggccgggcctc 297

                                                                       
Query: 98  gagccttatctcggcctgcactatccagccactgatatccctcaagcagctaggtttctg 157
           ||| | |||   ||||||||||| ||||||||||| |||||||| || ||| | |  |||
Sbjct: 298 gagtcatatgcaggcctgcactacccagccactgacatccctcaggctgctcgctacctg 357

                         
Query: 158 ttcatgaagaacaa 171
           ||||||||||||||
Sbjct: 358 ttcatgaagaacaa 371



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 296 atggagaacatgaactcgat 315
           ||||||||||||||||||||
Sbjct: 496 atggagaacatgaactcgat 515

---

>emb|AM234028.1| Striga linearifolia partial phya gene for phytochrome A, clone
           1322_13_4
          Length = 1413

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 118/146 (80%)
 Strand = Plus / Plus

                                                                       
Query: 44  ttccatgaagataaccatggcgaggtctttgccgagatcacaaagcctggccttgagcct 103
           |||||||||||  ||||||| ||||| || || ||| |||| | |||||| |||||||| 
Sbjct: 244 ttccatgaagacgaccatggtgaggttttcgctgaggtcacgaggcctgggcttgagccg 303

                                                                       
Query: 104 tatctcggcctgcactatccagccactgatatccctcaagcagctaggtttctgttcatg 163
           ||| | ||| | ||||| |||||||| || || ||||| || ||  | ||||||||||||
Sbjct: 304 tatttgggcttacactacccagccaccgacattcctcaggcggcccgttttctgttcatg 363

                                     
Query: 164 aagaacaaagtgcggatgatttgcga 189
           ||||| |||||  ||||||| |||||
Sbjct: 364 aagaataaagttaggatgatatgcga 389



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 287 cttcagtatatggagaacatgaactcgattgc 318
           |||| ||| |||||||||||||||||||||||
Sbjct: 490 cttcggtacatggagaacatgaactcgattgc 521

---

>emb|AM234014.1| Rhinanthus glacialis partial phya gene for phytochrome A, clone
           1538_1_1
          Length = 1842

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 94/114 (82%)
 Strand = Plus / Plus

                                                                       
Query: 77  gagatcacaaagcctggccttgagccttatctcggcctgcactatccagccactgatatc 136
           |||||||| || || ||||||||||||||| | ||| |||| ||||| || || ||||||
Sbjct: 277 gagatcactaaaccgggccttgagccttatgtgggcttgcattatcctgctacggatatc 336

                                                                 
Query: 137 cctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgatttgcgat 190
           || || |||||| | |||||||| |||||||| || ||  ||||||| ||||||
Sbjct: 337 ccgcaggcagctcgttttctgtttatgaagaataaggtcaggatgatatgcgat 390



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                         
Query: 273 cacacagctgtcaccttcagtatatggagaacatgaactcgattgc 318
           |||||||||| || || ||||| |||||||||||||||||||||||
Sbjct: 473 cacacagctgccatctgcagtacatggagaacatgaactcgattgc 518

---

>emb|AM234013.1| Rhinanthus freynii partial phya gene for phytochrome A, clone
           1553_3_4
          Length = 1842

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 94/114 (82%)
 Strand = Plus / Plus

                                                                       
Query: 77  gagatcacaaagcctggccttgagccttatctcggcctgcactatccagccactgatatc 136
           ||||||||||| || || |||||||||||| | ||| |||| ||||| || || ||||||
Sbjct: 277 gagatcacaaaaccgggacttgagccttatgtgggcttgcattatccggctacggatatc 336

                                                                 
Query: 137 cctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgatttgcgat 190
           || || |||||| | |||||||| |||||||| || ||  ||||||| ||||||
Sbjct: 337 ccgcaggcagctcgttttctgtttatgaagaataaggtcaggatgatatgcgat 390



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                         
Query: 273 cacacagctgtcaccttcagtatatggagaacatgaactcgattgc 318
           |||||||||| || || ||||| |||||||||||||||||||||||
Sbjct: 473 cacacagctgccatctgcagtacatggagaacatgaactcgattgc 518

---

>emb|AM234012.1| Rhinanthus alectorolophus partial phya gene for phytochrome A,
           clone 1552_9_1
          Length = 1842

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 94/114 (82%)
 Strand = Plus / Plus

                                                                       
Query: 77  gagatcacaaagcctggccttgagccttatctcggcctgcactatccagccactgatatc 136
           ||||||||||| || ||||||||||||||| | ||| |||| ||||| || || ||||||
Sbjct: 277 gagatcacaaaaccgggccttgagccttatgtgggcttgcattatccggctacggatatc 336

                                                                 
Query: 137 cctcaagcagctaggtttctgttcatgaagaacaaagtgcggatgatttgcgat 190
           || || || ||| | |||||||| |||||||| || ||  ||||||| ||||||
Sbjct: 337 ccgcaggctgctcgttttctgtttatgaagaataaggtcaggatgatatgcgat 390



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                         
Query: 273 cacacagctgtcaccttcagtatatggagaacatgaactcgattgc 318
           |||||||||| || || ||||| |||||||||||||||||||||||
Sbjct: 473 cacacagctgccatctgcagtacatggagaacatgaactcgattgc 518

---

>emb|AM233997.1| Orthocarpus bracteosus partial phya gene for phytochrome A, clone
           1408_8_1
          Length = 1827

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                         
Query: 273 cacacagctgtcaccttcagtatatggagaacatgaactcgattgc 318
           |||||||||||||| | ||||| |||||||||||||||||||||||
Sbjct: 473 cacacagctgtcacttgcagtacatggagaacatgaactcgattgc 518

---

>gb|U83271.1|DEU83271 Derris elliptica phytochrome A-like (PHYA-like) gene, exon 1,
           partial cds
          Length = 435

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                 
Query: 88  gcctggccttgagccttatctcggcctgcactatccagccactgatatccctca 141
           ||||||||| ||||||||||| ||  |||||||||||||||||||||| |||||
Sbjct: 39  gcctggcctagagccttatctgggtttgcactatccagccactgatattcctca 92

---

>gb|U61210.1|PSU61210 Pennisetum setaceum phytochrome (PHYC) gene, partial cds
          Length = 312

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 40/42 (95%)
 Strand = Plus / Plus

                                                     
Query: 149 aggtttctgttcatgaagaacaaagtgcggatgatttgcgat 190
           ||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 10  aggtttctgtttatgaagaacaaagtgcggatgatatgcgat 51

---

>gb|AY499071.1| Heteropterys steyermarkii phytochrome C (PHYC) gene, partial cds
          Length = 1177

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                       
Query: 114 tgcactatccagccactgatatccctcaagcagctaggtttctgttcatgaagaacaaag 173
           ||||||||||||| || ||||| || |||||  | |||||||| |||||||||||||| |
Sbjct: 260 tgcactatccagctacagatataccacaagcttcgaggtttctcttcatgaagaacaagg 319

                            
Query: 174 tgcggatgatttgcgat 190
           | |||||||| ||||||
Sbjct: 320 tacggatgatatgcgat 336

---

>gb|AY466468.1| Sorghum x drummondii voucher PI199869 phytochrome C (PHYC) gene,
           complete cds
          Length = 4422

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 126/157 (80%)
 Strand = Plus / Plus

                                                                       
Query: 27  gggttatggcttacaagttccatgaagataaccatggcgaggtctttgccgagatcacaa 86
           |||| ||||| |||||||||||||| ||| | ||||| |||||| || |||||  ||  |
Sbjct: 707 gggtcatggcgtacaagttccatgaggatgagcatggtgaggtcatttccgagtgcagga 766

                                                                       
Query: 87  agcctggccttgagccttatctcggcctgcactatccagccactgatatccctcaagcag 146
            | |||  || ||||| ||||| ||||||||||| |||||||| || ||||| || ||  
Sbjct: 767 ggtctgatctggagccgtatcttggcctgcactacccagccaccgacatcccgcaggcgt 826

                                                
Query: 147 ctaggtttctgttcatgaagaacaaagtgcggatgat 183
           | |||||  |||| ||||||||||||||| |||||||
Sbjct: 827 ccaggttcttgtttatgaagaacaaagtgaggatgat 863

---

>gb|AY466467.1| Sorghum arundinaceum voucher PI302233 phytochrome C (PHYC) gene,
           complete cds
          Length = 4424

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 126/157 (80%)
 Strand = Plus / Plus

                                                                       
Query: 27  gggttatggcttacaagttccatgaagataaccatggcgaggtctttgccgagatcacaa 86
           |||| ||||| |||||||||||||| ||| | ||||| |||||| || |||||  ||  |
Sbjct: 707 gggtcatggcgtacaagttccatgaggatgagcatggtgaggtcatttccgagtgcagga 766

                                                                       
Query: 87  agcctggccttgagccttatctcggcctgcactatccagccactgatatccctcaagcag 146
            | |||  || ||||| ||||| ||||||||||| |||||||| || ||||| || ||  
Sbjct: 767 ggtctgatctggagccgtatcttggcctgcactacccagccaccgacatcccgcaggcgt 826

                                                
Query: 147 ctaggtttctgttcatgaagaacaaagtgcggatgat 183
           | |||||  |||| ||||||||||||||| |||||||
Sbjct: 827 ccaggttcttgtttatgaagaacaaagtgaggatgat 863

---

>gb|AY466466.1| Sorghum arundinaceum voucher PI225905 phytochrome C (PHYC) gene,
           complete cds
          Length = 4427

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 126/157 (80%)
 Strand = Plus / Plus

                                                                       
Query: 27  gggttatggcttacaagttccatgaagataaccatggcgaggtctttgccgagatcacaa 86
           |||| ||||| |||||||||||||| ||| | ||||| |||||| || |||||  ||  |
Sbjct: 707 gggtcatggcgtacaagttccatgaggatgagcatggtgaggtcatttccgagtgcagga 766

                                                                       
Query: 87  agcctggccttgagccttatctcggcctgcactatccagccactgatatccctcaagcag 146
            | |||  || ||||| ||||| ||||||||||| |||||||| || ||||| || ||  
Sbjct: 767 ggtctgatctggagccgtatcttggcctgcactacccagccaccgacatcccgcaggcgt 826

                                                
Query: 147 ctaggtttctgttcatgaagaacaaagtgcggatgat 183
           | |||||  |||| ||||||||||||||| |||||||
Sbjct: 827 ccaggttcttgtttatgaagaacaaagtgaggatgat 863

---

>gb|AY466465.1| Sorghum arundinaceum voucher IS14485 phytochrome C (PHYC) gene,
           complete cds
          Length = 4422

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 126/157 (80%)
 Strand = Plus / Plus

                                                                       
Query: 27  gggttatggcttacaagttccatgaagataaccatggcgaggtctttgccgagatcacaa 86
           |||| ||||| |||||||||||||| ||| | ||||| |||||| || |||||  ||  |
Sbjct: 707 gggtcatggcgtacaagttccatgaggatgagcatggtgaggtcatttccgagtgcagga 766

                                                                       
Query: 87  agcctggccttgagccttatctcggcctgcactatccagccactgatatccctcaagcag 146
            | |||  || ||||| ||||| ||||||||||| |||||||| || ||||| || ||  
Sbjct: 767 ggtctgatctggagccgtatcttggcctgcactacccagccaccgacatcccgcaggcgt 826

                                                
Query: 147 ctaggtttctgttcatgaagaacaaagtgcggatgat 183
           | |||||  |||| ||||||||||||||| |||||||
Sbjct: 827 ccaggttcttgtttatgaagaacaaagtgaggatgat 863

---

>gb|AY466464.1| Sorghum arundinaceum voucher PI302105 phytochrome C (PHYC) gene,
           complete cds
          Length = 4422

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 126/157 (80%)
 Strand = Plus / Plus

                                                                       
Query: 27  gggttatggcttacaagttccatgaagataaccatggcgaggtctttgccgagatcacaa 86
           |||| ||||| |||||||||||||| ||| | ||||| |||||| || |||||  ||  |
Sbjct: 707 gggtcatggcgtacaagttccatgaggatgagcatggtgaggtcatttccgagtgcagga 766

                                                                       
Query: 87  agcctggccttgagccttatctcggcctgcactatccagccactgatatccctcaagcag 146
            | |||  || ||||| ||||| ||||||||||| |||||||| || ||||| || ||  
Sbjct: 767 ggtctgatctggagccgtatcttggcctgcactacccagccaccgacatcccgcaggcgt 826

                                                
Query: 147 ctaggtttctgttcatgaagaacaaagtgcggatgat 183
           | |||||  |||| ||||||||||||||| |||||||
Sbjct: 827 ccaggttcttgtttatgaagaacaaagtgaggatgat 863

---

>gb|AY466463.1| Sorghum arundinaceum voucher IS14567 phytochrome C (PHYC) gene,
           complete cds
          Length = 4422

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 126/157 (80%)
 Strand = Plus / Plus

                                                                       
Query: 27  gggttatggcttacaagttccatgaagataaccatggcgaggtctttgccgagatcacaa 86
           |||| ||||| |||||||||||||| ||| | ||||| |||||| || |||||  ||  |
Sbjct: 707 gggtcatggcgtacaagttccatgaggatgagcatggtgaggtcatttccgagtgcagga 766

                                                                       
Query: 87  agcctggccttgagccttatctcggcctgcactatccagccactgatatccctcaagcag 146
            | |||  || ||||| ||||| ||||||||||| |||||||| || ||||| || ||  
Sbjct: 767 ggtctgatctggagccgtatcttggcctgcactacccagccaccgacatcccgcaggcgt 826

                                                
Query: 147 ctaggtttctgttcatgaagaacaaagtgcggatgat 183
           | |||||  |||| ||||||||||||||| |||||||
Sbjct: 827 ccaggttcttgtttatgaagaacaaagtgaggatgat 863

---

>gb|AY466462.1| Sorghum arundinaceum voucher IS14503 phytochrome C (PHYC) gene,
           complete cds
          Length = 4427

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 126/157 (80%)
 Strand = Plus / Plus

                                                                       
Query: 27  gggttatggcttacaagttccatgaagataaccatggcgaggtctttgccgagatcacaa 86
           |||| ||||| |||||||||||||| ||| | ||||| |||||| || |||||  ||  |
Sbjct: 707 gggtcatggcgtacaagttccatgaggatgagcatggtgaggtcatttccgagtgcagga 766

                                                                       
Query: 87  agcctggccttgagccttatctcggcctgcactatccagccactgatatccctcaagcag 146
            | |||  || ||||| ||||| ||||||||||| |||||||| || ||||| || ||  
Sbjct: 767 ggtctgatctggagccgtatcttggcctgcactacccagccaccgacatcccgcaggcgt 826

                                                
Query: 147 ctaggtttctgttcatgaagaacaaagtgcggatgat 183
           | |||||  |||| ||||||||||||||| |||||||
Sbjct: 827 ccaggttcttgtttatgaagaacaaagtgaggatgat 863

---

>gb|AY466461.1| Sorghum arundinaceum voucher PI213900 phytochrome C (PHYC) gene,
           complete cds
          Length = 4427

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 126/157 (80%)
 Strand = Plus / Plus

                                                                       
Query: 27  gggttatggcttacaagttccatgaagataaccatggcgaggtctttgccgagatcacaa 86
           |||| ||||| |||||||||||||| ||| | ||||| |||||| || |||||  ||  |
Sbjct: 707 gggtcatggcgtacaagttccatgaggatgagcatggtgaggtcatttccgagtgcagga 766

                                                                       
Query: 87  agcctggccttgagccttatctcggcctgcactatccagccactgatatccctcaagcag 146
            | |||  || ||||| ||||| ||||||||||| |||||||| || ||||| || ||  
Sbjct: 767 ggtctgatctggagccgtatcttggcctgcactacccagccaccgacatcccgcaggcgt 826

                                                
Query: 147 ctaggtttctgttcatgaagaacaaagtgcggatgat 183
           | |||||  |||| ||||||||||||||| |||||||
Sbjct: 827 ccaggttcttgtttatgaagaacaaagtgaggatgat 863

---

>gb|AY466460.1| Sorghum arundinaceum voucher IS14569 phytochrome C (PHYC) gene,
           complete cds
          Length = 4427

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 126/157 (80%)
 Strand = Plus / Plus

                                                                       
Query: 27  gggttatggcttacaagttccatgaagataaccatggcgaggtctttgccgagatcacaa 86
           |||| ||||| |||||||||||||| ||| | ||||| |||||| || |||||  ||  |
Sbjct: 707 gggtcatggcgtacaagttccatgaggatgagcatggtgaggtcatttccgagtgcagga 766

                                                                       
Query: 87  agcctggccttgagccttatctcggcctgcactatccagccactgatatccctcaagcag 146
            | |||  || ||||| ||||| ||||||||||| |||||||| || ||||| || ||  
Sbjct: 767 ggtctgatctggagccgtatcttggcctgcactacccagccaccgacatcccgcaggcgt 826

                                                
Query: 147 ctaggtttctgttcatgaagaacaaagtgcggatgat 183
           | |||||  |||| ||||||||||||||| |||||||
Sbjct: 827 ccaggttcttgtttatgaagaacaaagtgaggatgat 863

---

>gb|AY466459.1| Sorghum bicolor phytochrome C (PHYC) gene, complete cds
          Length = 4422

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 126/157 (80%)
 Strand = Plus / Plus

                                                                       
Query: 27  gggttatggcttacaagttccatgaagataaccatggcgaggtctttgccgagatcacaa 86
           |||| ||||| |||||||||||||| ||| | ||||| |||||| || |||||  ||  |
Sbjct: 707 gggtcatggcgtacaagttccatgaggatgagcatggtgaggtcatttccgagtgcagga 766

                                                                       
Query: 87  agcctggccttgagccttatctcggcctgcactatccagccactgatatccctcaagcag 146
            | |||  || ||||| ||||| ||||||||||| |||||||| || ||||| || ||  
Sbjct: 767 ggtctgatctggagccgtatcttggcctgcactacccagccaccgacatcccgcaggcgt 826

                                                
Query: 147 ctaggtttctgttcatgaagaacaaagtgcggatgat 183
           | |||||  |||| ||||||||||||||| |||||||
Sbjct: 827 ccaggttcttgtttatgaagaacaaagtgaggatgat 863

---

>gb|AY466458.1| Sorghum bicolor phytochrome C (PHYC) gene, complete cds
          Length = 4422

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 126/157 (80%)
 Strand = Plus / Plus

                                                                       
Query: 27  gggttatggcttacaagttccatgaagataaccatggcgaggtctttgccgagatcacaa 86
           |||| ||||| |||||||||||||| ||| | ||||| |||||| || |||||  ||  |
Sbjct: 707 gggtcatggcgtacaagttccatgaggatgagcatggtgaggtcatttccgagtgcagga 766

                                                                       
Query: 87  agcctggccttgagccttatctcggcctgcactatccagccactgatatccctcaagcag 146
            | |||  || ||||| ||||| ||||||||||| |||||||| || ||||| || ||  
Sbjct: 767 ggtctgatctggagccgtatcttggcctgcactacccagccaccgacatcccgcaggcgt 826

                                                
Query: 147 ctaggtttctgttcatgaagaacaaagtgcggatgat 183
           | |||||  |||| ||||||||||||||| |||||||
Sbjct: 827 ccaggttcttgtttatgaagaacaaagtgaggatgat 863

---

>gb|AY466457.1| Sorghum bicolor voucher NSL83707 phytochrome C (PHYC) gene,
           complete cds
          Length = 4422

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 126/157 (80%)
 Strand = Plus / Plus

                                                                       
Query: 27  gggttatggcttacaagttccatgaagataaccatggcgaggtctttgccgagatcacaa 86
           |||| ||||| |||||||||||||| ||| | ||||| |||||| || |||||  ||  |
Sbjct: 707 gggtcatggcgtacaagttccatgaggatgagcatggtgaggtcatttccgagtgcagga 766

                                                                       
Query: 87  agcctggccttgagccttatctcggcctgcactatccagccactgatatccctcaagcag 146
            | |||  || ||||| ||||| ||||||||||| |||||||| || ||||| || ||  
Sbjct: 767 ggtctgatctggagccgtatcttggcctgcactacccagccaccgacatcccgcaggcgt 826

                                                
Query: 147 ctaggtttctgttcatgaagaacaaagtgcggatgat 183
           | |||||  |||| ||||||||||||||| |||||||
Sbjct: 827 ccaggttcttgtttatgaagaacaaagtgaggatgat 863

---

>gb|AY466456.1| Sorghum bicolor voucher PI152593 phytochrome C (PHYC) gene,
           complete cds
          Length = 4422

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 126/157 (80%)
 Strand = Plus / Plus

                                                                       
Query: 27  gggttatggcttacaagttccatgaagataaccatggcgaggtctttgccgagatcacaa 86
           |||| ||||| |||||||||||||| ||| | ||||| |||||| || |||||  ||  |
Sbjct: 707 gggtcatggcgtacaagttccatgaggatgagcatggtgaggtcatttccgagtgcagga 766

                                                                       
Query: 87  agcctggccttgagccttatctcggcctgcactatccagccactgatatccctcaagcag 146
            | |||  || ||||| ||||| ||||||||||| |||||||| || ||||| || ||  
Sbjct: 767 ggtctgatctggagccgtatcttggcctgcactacccagccaccgacatcccgcaggcgt 826

                                                
Query: 147 ctaggtttctgttcatgaagaacaaagtgcggatgat 183
           | |||||  |||| ||||||||||||||| |||||||
Sbjct: 827 ccaggttcttgtttatgaagaacaaagtgaggatgat 863

---

>gb|AY466455.1| Sorghum bicolor voucher PI229835 phytochrome C (PHYC) gene,
           complete cds
          Length = 4422

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 126/157 (80%)
 Strand = Plus / Plus

                                                                       
Query: 27  gggttatggcttacaagttccatgaagataaccatggcgaggtctttgccgagatcacaa 86
           |||| ||||| |||||||||||||| ||| | ||||| |||||| || |||||  ||  |
Sbjct: 707 gggtcatggcgtacaagttccatgaggatgagcatggtgaggtcatttccgagtgcagga 766

                                                                       
Query: 87  agcctggccttgagccttatctcggcctgcactatccagccactgatatccctcaagcag 146
            | |||  || ||||| ||||| ||||||||||| |||||||| || ||||| || ||  
Sbjct: 767 ggtctgatctggagccgtatcttggcctgcactacccagccaccgacatcccgcaggcgt 826

                                                
Query: 147 ctaggtttctgttcatgaagaacaaagtgcggatgat 183
           | |||||  |||| ||||||||||||||| |||||||
Sbjct: 827 ccaggttcttgtttatgaagaacaaagtgaggatgat 863

---

>gb|AY466454.1| Sorghum bicolor voucher PI153800 phytochrome C (PHYC) gene,
           complete cds
          Length = 4422

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 126/157 (80%)
 Strand = Plus / Plus

                                                                       
Query: 27  gggttatggcttacaagttccatgaagataaccatggcgaggtctttgccgagatcacaa 86
           |||| ||||| |||||||||||||| ||| | ||||| |||||| || |||||  ||  |
Sbjct: 707 gggtcatggcgtacaagttccatgaggatgagcatggtgaggtcatttccgagtgcagga 766

                                                                       
Query: 87  agcctggccttgagccttatctcggcctgcactatccagccactgatatccctcaagcag 146
            | |||  || ||||| ||||| ||||||||||| |||||||| || ||||| || ||  
Sbjct: 767 ggtctgatctggagccgtatcttggcctgcactacccagccaccgacatcccgcaggcgt 826

                                                
Query: 147 ctaggtttctgttcatgaagaacaaagtgcggatgat 183
           | |||||  |||| ||||||||||||||| |||||||
Sbjct: 827 ccaggttcttgtttatgaagaacaaagtgaggatgat 863

---

>gb|AY466453.1| Sorghum bicolor voucher PI267380 phytochrome C (PHYC) gene,
           complete cds
          Length = 4422

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 126/157 (80%)
 Strand = Plus / Plus

                                                                       
Query: 27  gggttatggcttacaagttccatgaagataaccatggcgaggtctttgccgagatcacaa 86
           |||| ||||| |||||||||||||| ||| | ||||| |||||| || |||||  ||  |
Sbjct: 707 gggtcatggcgtacaagttccatgaggatgagcatggtgaggtcatttccgagtgcagga 766

                                                                       
Query: 87  agcctggccttgagccttatctcggcctgcactatccagccactgatatccctcaagcag 146
            | |||  || ||||| ||||| ||||||||||| |||||||| || ||||| || ||  
Sbjct: 767 ggtctgatctggagccgtatcttggcctgcactacccagccaccgacatcccgcaggcgt 826

                                                
Query: 147 ctaggtttctgttcatgaagaacaaagtgcggatgat 183
           | |||||  |||| ||||||||||||||| |||||||
Sbjct: 827 ccaggttcttgtttatgaagaacaaagtgaggatgat 863

---

>gb|AF276739.1|AF276739 Pteridophyllum racemosum phytochrome A (PHYA) gene, partial cds
          Length = 1322

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 114/141 (80%)
 Strand = Plus / Plus

                                                                       
Query: 32  atggcttacaagttccatgaagataaccatggcgaggtctttgccgagatcacaaagcct 91
           |||||||| ||||| ||||| ||| ||||||| |||||  || | ||| | |||||||| 
Sbjct: 160 atggcttataagtttcatgacgatgaccatggagaggttatttctgaggttacaaagccc 219

                                                                       
Query: 92  ggccttgagccttatctcggcctgcactatccagccactgatatccctcaagcagctagg 151
           ||||| || |||||| | ||  | || || |||||||| |||||||||||||| ||  | 
Sbjct: 220 ggcctcgaaccttatttgggtttacattacccagccacagatatccctcaagccgcccga 279

                                
Query: 152 tttctgttcatgaagaacaaa 172
           ||||| |||||||||||||||
Sbjct: 280 tttctcttcatgaagaacaaa 300

---

>gb|AF276738.1|AF276738 Pseudowintera axillaris phytochrome C (PHYC) gene, partial cds
          Length = 1185

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 57/65 (87%)
 Strand = Plus / Plus

                                                                       
Query: 101 ccttatctcggcctgcactatccagccactgatatccctcaagcagctaggtttctgttc 160
           |||||||| ||| |||| |||||||| |||||||||||||||||  | |||||| |||||
Sbjct: 247 ccttatcttggcttgcattatccagctactgatatccctcaagcttcgaggtttttgttc 306

                
Query: 161 atgaa 165
           |||||
Sbjct: 307 atgaa 311

---

>gb|AF190087.1|AF190087 Hernandia lychnifera phytochrome C (PHYC) gene, partial cds
          Length = 1035

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 75/89 (84%)
 Strand = Plus / Plus

                                                                       
Query: 98  gagccttatctcggcctgcactatccagccactgatatccctcaagcagctaggtttctg 157
           ||||||||||| ||  | || || ||||| |||||||||||||||||  |  ||||||||
Sbjct: 244 gagccttatcttgggttacattacccagcaactgatatccctcaagcttcgcggtttctg 303

                                        
Query: 158 ttcatgaagaacaaagtgcggatgatttg 186
           ||||||||||| || || |||||||||||
Sbjct: 304 ttcatgaagaataaggttcggatgatttg 332

---

>emb|AJ286649.1|PSY286649 Pinus sylvestris partial phyP/Allel gene for phytochrome
          Length = 564

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 78/93 (83%)
 Strand = Plus / Plus

                                                                       
Query: 98  gagccttatctcggcctgcactatccagccactgatatccctcaagcagctaggtttctg 157
           ||||||||||| ||  |||| || || ||||| ||||||||||| |||||| | ||||| 
Sbjct: 46  gagccttatcttgggttgcattaccctgccaccgatatccctcaggcagctcgctttctc 105

                                            
Query: 158 ttcatgaagaacaaagtgcggatgatttgcgat 190
           || ||| ||||||| ||||| ||||||||||||
Sbjct: 106 tttatgcagaacaaggtgcgaatgatttgcgat 138

---

>gb|U78068.1|DNU78068 Dalbergiella nyasae phytochrome A (PHYA) gene, partial cds
          Length = 600

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                       
Query: 59  catggcgaggtctttgccgagatcacaaagcctggccttgagccttatctcggcctgcac 118
           ||||| |||||  |||| ||||| |||||||| || |||||||| ||||| ||  |||||
Sbjct: 10  catggggaggtgattgctgagataacaaagccaggacttgagccatatctgggtttgcac 69

                            
Query: 119 tatccagccactgatat 135
           |||||||||||||||||
Sbjct: 70  tatccagccactgatat 86

---

>emb|AM233986.1| Nesogenes africanus partial phya gene for phytochrome A, clone
           1602_1_1
          Length = 1138

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 51/57 (89%)
 Strand = Plus / Plus

                                                                    
Query: 275 cacagctgtcaccttcagtatatggagaacatgaactcgattgcatcccttgtcatg 331
           |||||||| |||||||| || |||||||||||||||||||| || ||||| ||||||
Sbjct: 421 cacagctgccaccttcactacatggagaacatgaactcgatagcgtccctcgtcatg 477


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,585,399
Number of Sequences: 3902068
Number of extensions: 4585399
Number of successful extensions: 88909
Number of sequences better than 10.0: 727
Number of HSP's better than 10.0 without gapping: 726
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 87323
Number of HSP's gapped (non-prelim): 1508
length of query: 445
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 423
effective length of database: 17,147,199,772
effective search space: 7253265503556
effective search space used: 7253265503556
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---