>CP6D3_MUSDO (Q964Q7) Cytochrome P450 6d3 (EC 1.14.-.-) (CYPVID3) (Pyrethroid|
           resistance cytochrome P450)
          Length = 520

 Score = 32.3 bits (72), Expect = 0.50
 Identities = 19/52 (36%), Positives = 29/52 (55%)
 Frame = +3

Query: 252 KIFARRNMEGGLSSSDLYREFRDQLAQALLRVEPAILRVLIEVFRQVAEKDF 407
           K+F R+    GL   DLY +F++Q+    L  +PA+L    E+ RQ+   DF
Sbjct: 43  KVF-RKERPFGLVMYDLYEKFQEQVVGIYLFFKPALLIRDAELARQILTSDF 93

>PKP3_HUMAN (Q9Y446) Plakophilin-3|
          Length = 797

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = -2

Query: 398 LRNLAKNFNQHSKNCRFHSKQSLSKLVAKLPVQIGRREPPFHV 270
           L  L +N +++++N    S + +S L+ KLP  +G + PP  V
Sbjct: 675 LTGLIRNLSRNARNKDEMSTKVVSHLIEKLPGSVGEKSPPAEV 717

>MMPL3_MYCTU (O53657) Putative membrane protein mmpL3|
          Length = 944

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 21/55 (38%), Positives = 23/55 (41%), Gaps = 5/55 (9%)
 Frame = +3

Query: 159  AAGDPRFPIALLAVAAGDGDQGTRI-----AAAAYLKIFARRNMEGGLSSSDLYR 308
            AAGDP  P A L +   DGD          A     K   RR   G LS+ DL R
Sbjct: 885  AAGDPAEPTAALPIIRSDGDDSEAATEQLNARGTSDKTRQRRRGGGALSAQDLLR 939

>PKP3_MOUSE (Q9QY23) Plakophilin-3|
          Length = 797

 Score = 29.3 bits (64), Expect = 4.2
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = -2

Query: 398 LRNLAKNFNQHSKNCRFHSKQSLSKLVAKLPVQIGRREPPFHV 270
           L  L +N +++++N    S + +S L+ KLP  +G + PP  V
Sbjct: 675 LTGLIRNLSRNARNKDEMSTKVVSHLIEKLPGSVGEKCPPAEV 717

>TBC2_CHLRE (Q8VXP3) Tbc2 translation factor, chloroplast precursor|
          Length = 1115

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 10/49 (20%)
 Frame = +3

Query: 129  AATAGLDRISAAGDPRFPIALLAVAAGDG----------DQGTRIAAAA 245
            AA AG    +AAGD    ++ +  AAGDG          D GT   AAA
Sbjct: 933  AAPAGASSAAAAGDSPAALSAVPAAAGDGALVPSFMSIDDDGTAAVAAA 981

>TI50C_DROME (Q9W4V8) Import inner membrane translocase subunit TIM50-C,|
           mitochondrial precursor
          Length = 428

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +3

Query: 207 GDGDQGTRIAAAAYLKIFARRNMEGGLSSSDLYREFRDQLAQ 332
           G+ D G  +   A+LKI A+ N++        YR+F D + Q
Sbjct: 350 GNDDDGQLLDLIAFLKIIAQNNVDDVREVLHYYRQFDDPINQ 391

>PROV_ECOLI (P14175) Glycine betaine/L-proline transport ATP-binding protein|
           proV
          Length = 400

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
 Frame = -2

Query: 407 KIFLRNLAKNFNQHSKNCRFHSKQSLSK--LVAKLPVQIGRREPPFHVAPGENFQVS--R 240
           K+ ++NL K F +H +    + +Q LSK  ++ K  + +G ++    +  GE F +    
Sbjct: 4   KLEIKNLYKIFGEHPQRAFKYIEQGLSKEQILEKTGLSLGVKDASLAIEEGEIFVIMGLS 63

Query: 239 GSYSCTLITI 210
           GS   T++ +
Sbjct: 64  GSGKSTMVRL 73

>CSE1_DROME (Q9XZU1) Importin-alpha re-exporter (Cellular apoptosis|
           susceptibility protein homolog)
          Length = 975

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 33/126 (26%), Positives = 49/126 (38%), Gaps = 8/126 (6%)
 Frame = +3

Query: 78  LRSLLAATLSADKTSVDAATAGLDRISAAGDPRFPIALL-AVAAGDGDQGTRIAAAAYLK 254
           L   L  TLSAD      A   L+  S      +PI LL  +     D  TR+A A   K
Sbjct: 11  LAGYLQQTLSADPNVRRPAEKLLE--STELQQNYPILLLNLIDKAQMDMTTRVAGAIAFK 68

Query: 255 IFARRNMEGGLSSSDLYR-------EFRDQLAQALLRVEPAILRVLIEVFRQVAEKDFVK 413
            + +RN    L S    R         +  +   +L    A+ + L +    + + DF K
Sbjct: 69  NYIKRNWAAHLDSDGPDRIHESDRNTIKTLIVTLMLHSPVALQKQLSDAVSIIGKYDFPK 128

Query: 414 ENSWPE 431
           +  WP+
Sbjct: 129 K--WPQ 132

>VP4_ROTB9 (Q08010) Outer capsid protein VP4 (Hemagglutinin) (Outer layer|
           protein VP4) [Contains: Outer capsid protein VP8; Outer
           capsid protein VP5]
          Length = 770

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
 Frame = +3

Query: 84  SLLAATLSADKTSVDAATAGLDRISAAGDPRFPIALLAVAAGD-GDQGTRIAAAAYLKIF 260
           S +   LS   TSV  A++     S   +        +VA  D   Q +RIA+   +K F
Sbjct: 558 STITEELSDAATSVSRASSIRSNASVWNNLVDTRTQTSVATNDIATQTSRIASKLRVKEF 617

Query: 261 ARRNMEGGLSSSDLYREFRDQLAQALLRVEPAILRVLI 374
           A +  EGGLS +D+           +  V+P IL  +I
Sbjct: 618 ATQT-EGGLSFNDISAAVLKTKIDKIETVQPKILPTII 654

>CSE1_PAGMA (Q9PTU3) Importin-alpha re-exporter (Chromosome segregation 1-like|
           protein) (Cellular apoptosis susceptibility protein)
          Length = 971

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 28/123 (22%), Positives = 46/123 (37%), Gaps = 5/123 (4%)
 Frame = +3

Query: 78  LRSLLAATLSADKTSVDAATAGLDRISAAGDPRFPIALLAVAAGDGDQGTRIAAAAYLKI 257
           L   L   L  D T    A   L+  S  G+  +P+ LL +     D   R+ AA   K 
Sbjct: 11  LTEFLRKALDPDPTVRRPAEKFLE--SVEGNQNYPLLLLTLLEKSQDNVIRVCAAVTFKN 68

Query: 258 FARRNM-----EGGLSSSDLYREFRDQLAQALLRVEPAILRVLIEVFRQVAEKDFVKENS 422
           + +RN      E    S       +  +   +L     I + L +    +  +DF ++  
Sbjct: 69  YIKRNWRVIEDEPNKVSDPDRTAIKANIVNLMLSSPEQIQKQLSDAISIIGREDFPQK-- 126

Query: 423 WPE 431
           WP+
Sbjct: 127 WPD 129


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,772,569
Number of Sequences: 219361
Number of extensions: 587319
Number of successful extensions: 2401
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2400
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2453576370
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)