ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl02f12 |
|---|---|
| Clone Library Name | barley_pub |
>NUDT3_ARATH (Q8L831) Nudix hydrolase 3 (EC 3.6.1.-) (AtNUDT3)| Length = 772 Score = 135 bits (340), Expect = 4e-32 Identities = 62/80 (77%), Positives = 71/80 (88%) Frame = +3 Query: 195 EERLDVLTAAGDKTGVSKPRSEVHRDGDYHRAVHVWIYCESTGELLLQRRADCKDSWPGQ 374 EE DVLT +G+KTGVSKPR EVHRDGDYHRAVHVWI+ E+T +LLLQ R+D KDSWPGQ Sbjct: 3 EEHFDVLTKSGEKTGVSKPRGEVHRDGDYHRAVHVWIFVETTQQLLLQLRSDDKDSWPGQ 62 Query: 375 WDISSAGHVSAGDSSLSSAR 434 WDISSAGH+SAGD+SL SA+ Sbjct: 63 WDISSAGHISAGDTSLLSAQ 82
>Y368_LISMO (Q8Y9Z9) Putative Nudix hydrolase lmo0368 (EC 3.6.-.-)| Length = 169 Score = 57.0 bits (136), Expect = 2e-08 Identities = 29/78 (37%), Positives = 44/78 (56%) Frame = +3 Query: 198 ERLDVLTAAGDKTGVSKPRSEVHRDGDYHRAVHVWIYCESTGELLLQRRADCKDSWPGQW 377 E D+L + TG + R E G+ H +HV I+ E G+LL+Q+R K+ WP W Sbjct: 2 EEWDLLNENRELTGKTHIRGEKLAPGELHLVIHVCIFNEK-GQLLIQKRQKDKEGWPNYW 60 Query: 378 DISSAGHVSAGDSSLSSA 431 D+S+AG G++S +A Sbjct: 61 DLSAAGSALKGETSQQAA 78
>Y387_LISIN (Q92ES1) Putative Nudix hydrolase lin0387 (EC 3.6.-.-)| Length = 169 Score = 54.3 bits (129), Expect = 1e-07 Identities = 29/78 (37%), Positives = 43/78 (55%) Frame = +3 Query: 198 ERLDVLTAAGDKTGVSKPRSEVHRDGDYHRAVHVWIYCESTGELLLQRRADCKDSWPGQW 377 E D+L + T + R E G+ H VHV I+ E G+LL+Q+R K+ WP W Sbjct: 2 EEWDLLNENRELTRKTHIRGEKLAPGELHLVVHVCIFNEK-GQLLIQKRQKDKEGWPNYW 60 Query: 378 DISSAGHVSAGDSSLSSA 431 D+S+AG G++S +A Sbjct: 61 DLSAAGSALKGETSRQAA 78
>Y446_CLOAB (Q97LV8) Putative Nudix hydrolase CAC0446 (EC 3.6.-.-)| Length = 206 Score = 51.6 bits (122), Expect = 8e-07 Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 2/76 (2%) Frame = +3 Query: 195 EERLDVLTAAGDKTGVSKPRSEVHRDGDYHRAVHVWIYCESTGE--LLLQRRADCKDSWP 368 EE LD+ G K R EVH G +H H W+ + L+ Q+R KD+ P Sbjct: 3 EEFLDIFDEEERLIG-RKSRKEVHEKGYWHSTFHCWVVKREGKKTFLIFQKRHPLKDTAP 61 Query: 369 GQWDISSAGHVSAGDS 416 +D+SSAGH+ +G+S Sbjct: 62 NMFDVSSAGHIKSGES 77
>IDI_SHIFL (Q83MJ9) Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) (IPP| isomerase) (Isopentenyl pyrophosphate isomerase) (IPP:DMAPP isomerase) Length = 182 Score = 47.4 bits (111), Expect = 2e-05 Identities = 27/74 (36%), Positives = 38/74 (51%) Frame = +3 Query: 198 ERLDVLTAAGDKTGVSKPRSEVHRDGDYHRAVHVWIYCESTGELLLQRRADCKDSWPGQW 377 E + +L A G TG + + D H A W++ + G+LL+ RRA K +WPG W Sbjct: 4 EHVILLNAQGVPTGTLEKYAAHTADTLLHLAFSSWLF-NAKGQLLVTRRALSKKAWPGVW 62 Query: 378 DISSAGHVSAGDSS 419 S GH G+SS Sbjct: 63 TNSVCGHPQLGESS 76
>IDI_SHISS (Q3YXY0) Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) (IPP| isomerase) (Isopentenyl pyrophosphate isomerase) (IPP:DMAPP isomerase) Length = 182 Score = 47.0 bits (110), Expect = 2e-05 Identities = 26/74 (35%), Positives = 38/74 (51%) Frame = +3 Query: 198 ERLDVLTAAGDKTGVSKPRSEVHRDGDYHRAVHVWIYCESTGELLLQRRADCKDSWPGQW 377 E + +L A G TG + + D H A W++ + G+LL+ RRA K +WPG W Sbjct: 4 EHVILLNAQGVPTGTLEKYAAHTADTRLHLAFSSWLF-NAKGQLLVTRRALSKKAWPGVW 62 Query: 378 DISSAGHVSAGDSS 419 S GH G+S+ Sbjct: 63 TNSVCGHPQLGESN 76
>IDI_SHIDS (Q32BV2) Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) (IPP| isomerase) (Isopentenyl pyrophosphate isomerase) (IPP:DMAPP isomerase) Length = 182 Score = 47.0 bits (110), Expect = 2e-05 Identities = 26/74 (35%), Positives = 38/74 (51%) Frame = +3 Query: 198 ERLDVLTAAGDKTGVSKPRSEVHRDGDYHRAVHVWIYCESTGELLLQRRADCKDSWPGQW 377 E + +L A G TG + + D H A W++ + G+LL+ RRA K +WPG W Sbjct: 4 EHVILLNAQGVPTGTLEKYAAHTADTRLHLAFSSWLF-NAKGQLLVTRRALSKKAWPGVW 62 Query: 378 DISSAGHVSAGDSS 419 S GH G+S+ Sbjct: 63 TNSVCGHPQLGESN 76
>IDI_ECOLI (Q46822) Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) (IPP| isomerase) (Isopentenyl pyrophosphate isomerase) (IPP:DMAPP isomerase) Length = 182 Score = 47.0 bits (110), Expect = 2e-05 Identities = 26/74 (35%), Positives = 38/74 (51%) Frame = +3 Query: 198 ERLDVLTAAGDKTGVSKPRSEVHRDGDYHRAVHVWIYCESTGELLLQRRADCKDSWPGQW 377 E + +L A G TG + + D H A W++ + G+LL+ RRA K +WPG W Sbjct: 4 EHVILLNAQGVPTGTLEKYAAHTADTRLHLAFSSWLF-NAKGQLLVTRRALSKKAWPGVW 62 Query: 378 DISSAGHVSAGDSS 419 S GH G+S+ Sbjct: 63 TNSVCGHPQLGESN 76
>IDI_ECO57 (Q8XD58) Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) (IPP| isomerase) (Isopentenyl pyrophosphate isomerase) (IPP:DMAPP isomerase) Length = 182 Score = 47.0 bits (110), Expect = 2e-05 Identities = 26/74 (35%), Positives = 38/74 (51%) Frame = +3 Query: 198 ERLDVLTAAGDKTGVSKPRSEVHRDGDYHRAVHVWIYCESTGELLLQRRADCKDSWPGQW 377 E + +L A G TG + + D H A W++ + G+LL+ RRA K +WPG W Sbjct: 4 EHVILLNAQGVPTGTLEKYAAHTADTRLHLAFSSWLF-NAKGQLLVTRRALSKKAWPGVW 62 Query: 378 DISSAGHVSAGDSS 419 S GH G+S+ Sbjct: 63 TNSVCGHPQLGESN 76
>IDI_SHIBS (Q31WF1) Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) (IPP| isomerase) (Isopentenyl pyrophosphate isomerase) (IPP:DMAPP isomerase) Length = 182 Score = 46.2 bits (108), Expect = 3e-05 Identities = 26/74 (35%), Positives = 38/74 (51%) Frame = +3 Query: 198 ERLDVLTAAGDKTGVSKPRSEVHRDGDYHRAVHVWIYCESTGELLLQRRADCKDSWPGQW 377 E + +L A G TG + + D H A W++ + G+LL+ RRA K +WPG W Sbjct: 4 EHVILLNAQGVPTGTLEKYAAHTADTLLHLAFSSWLF-NAKGQLLVTRRALSKKAWPGVW 62 Query: 378 DISSAGHVSAGDSS 419 S GH G+S+ Sbjct: 63 TNSVCGHPQLGESN 76
>IDI_ECOL6 (Q8FE75) Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) (IPP| isomerase) (Isopentenyl pyrophosphate isomerase) (IPP:DMAPP isomerase) Length = 182 Score = 46.2 bits (108), Expect = 3e-05 Identities = 26/74 (35%), Positives = 38/74 (51%) Frame = +3 Query: 198 ERLDVLTAAGDKTGVSKPRSEVHRDGDYHRAVHVWIYCESTGELLLQRRADCKDSWPGQW 377 E + +L A G TG + + D H A W++ + G+LL+ RRA K +WPG W Sbjct: 4 EHVILLNAQGVPTGTLEKYAAHTADTLLHLAFSSWLF-NAKGQLLVTRRALSKKAWPGVW 62 Query: 378 DISSAGHVSAGDSS 419 S GH G+S+ Sbjct: 63 TNSVCGHPQLGESN 76
>Y4841_PSEAE (Q9HUW9) Putative Nudix hydrolase PA4841 (EC 3.6.-.-)| Length = 169 Score = 45.1 bits (105), Expect = 8e-05 Identities = 24/63 (38%), Positives = 35/63 (55%) Frame = +3 Query: 243 SKPRSEVHRDGDYHRAVHVWIYCESTGELLLQRRADCKDSWPGQWDISSAGHVSAGDSSL 422 S PR+E+ G R + ++ S GEL +QRR K +PG WD+++ G V AG+ Sbjct: 24 SLPRAELRERGLIGRGTFILLF-NSAGELCVQRRTLSKAVYPGYWDLAAGGMVQAGEPYA 82 Query: 423 SSA 431 SA Sbjct: 83 DSA 85
>IDI_ERWCT (Q6D3F5) Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) (IPP| isomerase) (Isopentenyl pyrophosphate isomerase) (IPP:DMAPP isomerase) Length = 179 Score = 44.7 bits (104), Expect = 1e-04 Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 1/75 (1%) Frame = +3 Query: 210 VLTAAGDK-TGVSKPRSEVHRDGDYHRAVHVWIYCESTGELLLQRRADCKDSWPGQWDIS 386 VL DK TGV + + E H G+ HRA+ V+I+ S +LLLQ+RA+ K G W + Sbjct: 7 VLVDENDKPTGVME-KQEAHVKGELHRAITVYIF-NSRQQLLLQQRAEEKYHSGGLWSNT 64 Query: 387 SAGHVSAGDSSLSSA 431 H + G+ +L +A Sbjct: 65 CCSHPAPGEETLQAA 79
>Y2781_YERPE (Q8ZD12) Putative Nudix hydrolase YPO2781/y1614/YP2383 (EC 3.6.-.-)| Length = 182 Score = 43.5 bits (101), Expect = 2e-04 Identities = 20/51 (39%), Positives = 35/51 (68%) Frame = +3 Query: 282 HRAVHVWIYCESTGELLLQRRADCKDSWPGQWDISSAGHVSAGDSSLSSAR 434 HRA ++ ++ + G++L+QRR + KD PG+ D ++ G V +G++ L SAR Sbjct: 38 HRATYIVVH-DGMGKILVQRRTESKDFHPGKLDATAGGVVQSGENYLESAR 87
>IDI_CITFR (Q7X5H2) Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) (IPP| isomerase) (Isopentenyl pyrophosphate isomerase) (IPP:DMAPP isomerase) Length = 182 Score = 43.5 bits (101), Expect = 2e-04 Identities = 24/75 (32%), Positives = 37/75 (49%) Frame = +3 Query: 195 EERLDVLTAAGDKTGVSKPRSEVHRDGDYHRAVHVWIYCESTGELLLQRRADCKDSWPGQ 374 +ER+ +L G G + + H A WI+ E G+LL+ RR+ K +WPG Sbjct: 3 QERVILLNEQGQPCGTLEKYAAHTATTPLHSAFSCWIFNEQ-GQLLVTRRSLHKKAWPGV 61 Query: 375 WDISSAGHVSAGDSS 419 W S GH G+++ Sbjct: 62 WTNSVCGHPQLGETT 76
>IDI_MYCTU (P72002) Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) (IPP| isomerase) (Isopentenyl pyrophosphate isomerase) (IPP:DMAPP isomerase) Length = 203 Score = 43.1 bits (100), Expect = 3e-04 Identities = 25/73 (34%), Positives = 37/73 (50%) Frame = +3 Query: 198 ERLDVLTAAGDKTGVSKPRSEVHRDGDYHRAVHVWIYCESTGELLLQRRADCKDSWPGQW 377 ER+ +L GD TGV+ + D H A +++ + +LL+ RRA K +WP W Sbjct: 12 ERVVLLNDRGDATGVADKATVHTGDTPLHLAFSSYVF-DLHDQLLITRRAATKRTWPAVW 70 Query: 378 DISSAGHVSAGDS 416 S GH G+S Sbjct: 71 TNSCCGHPLPGES 83
>IDI_NOCFA (Q5YYB6) Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) (IPP| isomerase) (Isopentenyl pyrophosphate isomerase) (IPP:DMAPP isomerase) Length = 175 Score = 43.1 bits (100), Expect = 3e-04 Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 1/77 (1%) Frame = +3 Query: 204 LDVLTAAGDKTGVSKPRSEVHRD-GDYHRAVHVWIYCESTGELLLQRRADCKDSWPGQWD 380 ++++ AG G P +E HRD G HRA V ++ ++ G +LLQ+RA K +P W Sbjct: 3 VELVDEAGRAVGAC-PVAEAHRDPGKLHRAFSVLLF-DTAGRVLLQQRAAVKTRFPLLWA 60 Query: 381 ISSAGHVSAGDSSLSSA 431 + GH + G+S ++A Sbjct: 61 NTCCGHPAPGESVEAAA 77
>IDI2_PHOLL (Q7N0A6) Isopentenyl-diphosphate delta-isomerase 2 (EC 5.3.3.2)| (IPP isomerase 2) (Isopentenyl pyrophosphate isomerase 2) (IPP:DMAPP isomerase 2) Length = 177 Score = 42.4 bits (98), Expect = 5e-04 Identities = 24/74 (32%), Positives = 40/74 (54%) Frame = +3 Query: 210 VLTAAGDKTGVSKPRSEVHRDGDYHRAVHVWIYCESTGELLLQRRADCKDSWPGQWDISS 389 VL D S ++++H+ G HRA ++++ ++ G LLLQ+RA K G W S Sbjct: 6 VLVDKHDNPIGSAGKADIHQKGMLHRAFSIFVF-DNKGNLLLQKRAATKYHSAGLWTNSC 64 Query: 390 AGHVSAGDSSLSSA 431 GH G++ ++A Sbjct: 65 CGHPRVGEALEAAA 78
>IDI_CORDI (P60923) Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) (IPP| isomerase) (Isopentenyl pyrophosphate isomerase) (IPP:DMAPP isomerase) Length = 183 Score = 42.0 bits (97), Expect = 6e-04 Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 1/72 (1%) Frame = +3 Query: 204 LDVLTAAGDKTGVSKPRSEVHR-DGDYHRAVHVWIYCESTGELLLQRRADCKDSWPGQWD 380 L VL K + +SEVH D H A ++ + G+LL+ RRA K +WPG W Sbjct: 6 LVVLADEFGKPSGTAVKSEVHTTDTPLHFAFSCYVR-NNKGDLLITRRALSKKTWPGVWT 64 Query: 381 ISSAGHVSAGDS 416 S+ GH+ G++ Sbjct: 65 NSACGHLMPGET 76
>IDI_MYCBO (Q7VEU0) Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) (IPP| isomerase) (Isopentenyl pyrophosphate isomerase) (IPP:DMAPP isomerase) Length = 176 Score = 41.6 bits (96), Expect = 8e-04 Identities = 25/73 (34%), Positives = 36/73 (49%) Frame = +3 Query: 198 ERLDVLTAAGDKTGVSKPRSEVHRDGDYHRAVHVWIYCESTGELLLQRRADCKDSWPGQW 377 ER+ +L GD TGV+ + D H A ++ + +LL+ RRA K +WP W Sbjct: 12 ERVVLLNDRGDATGVADKATVHTGDTPLHLAFSSYV-SDLHDQLLITRRAATKRTWPAVW 70 Query: 378 DISSAGHVSAGDS 416 S GH G+S Sbjct: 71 TNSCCGHPLPGES 83
>IDI_AGRRH (Q9KWD1) Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) (IPP| isomerase) (Isopentenyl pyrophosphate isomerase) (IPP:DMAPP isomerase) Length = 209 Score = 41.6 bits (96), Expect = 8e-04 Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 1/64 (1%) Frame = +3 Query: 225 GDKTGVSKPRSEVHR-DGDYHRAVHVWIYCESTGELLLQRRADCKDSWPGQWDISSAGHV 401 G+ TG + P+SE+H D H A V+I+ +LL+ RRA K +WPG S GH Sbjct: 19 GEATGTA-PKSEIHHSDTPLHLAFSVYIF-NGDNKLLVTRRASDKITWPGVLSNSCCGHP 76 Query: 402 SAGD 413 G+ Sbjct: 77 QPGE 80
>IDI_COREF (Q8FND7) Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) (IPP| isomerase) (Isopentenyl pyrophosphate isomerase) (IPP:DMAPP isomerase) Length = 190 Score = 41.6 bits (96), Expect = 8e-04 Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 1/81 (1%) Frame = +3 Query: 195 EERLDVLTAAGDKTGVSKPRSEVHR-DGDYHRAVHVWIYCESTGELLLQRRADCKDSWPG 371 EE L VL + P++ VH D H A +I GELL+ RRA K +WPG Sbjct: 4 EEELVVLADEEGNAIGTAPKATVHTTDTPLHFAFSSYIL-NPRGELLVTRRALSKKTWPG 62 Query: 372 QWDISSAGHVSAGDSSLSSAR 434 W S GH + +++ + R Sbjct: 63 VWTNSMCGHPAPDETNADAIR 83
>YFCD_SHIFL (P59196) Putative Nudix hydrolase yfcD (EC 3.6.-.-)| Length = 180 Score = 41.2 bits (95), Expect = 0.001 Identities = 20/51 (39%), Positives = 32/51 (62%) Frame = +3 Query: 282 HRAVHVWIYCESTGELLLQRRADCKDSWPGQWDISSAGHVSAGDSSLSSAR 434 HRA ++ ++ + G++L+QRR + KD PG D ++ G V A + L SAR Sbjct: 37 HRATYIVVH-DGMGKILVQRRTETKDFLPGMLDATAGGVVQADEQLLESAR 86
>YFCD_ECOLI (P65556) Putative Nudix hydrolase yfcD (EC 3.6.-.-)| Length = 180 Score = 41.2 bits (95), Expect = 0.001 Identities = 20/51 (39%), Positives = 32/51 (62%) Frame = +3 Query: 282 HRAVHVWIYCESTGELLLQRRADCKDSWPGQWDISSAGHVSAGDSSLSSAR 434 HRA ++ ++ + G++L+QRR + KD PG D ++ G V A + L SAR Sbjct: 37 HRATYIVVH-DGMGKILVQRRTETKDFLPGMLDATAGGVVQADEQLLESAR 86
>YFCD_ECOL6 (P65557) Putative Nudix hydrolase yfcD (EC 3.6.-.-)| Length = 180 Score = 41.2 bits (95), Expect = 0.001 Identities = 20/51 (39%), Positives = 32/51 (62%) Frame = +3 Query: 282 HRAVHVWIYCESTGELLLQRRADCKDSWPGQWDISSAGHVSAGDSSLSSAR 434 HRA ++ ++ + G++L+QRR + KD PG D ++ G V A + L SAR Sbjct: 37 HRATYIVVH-DGMGKILVQRRTETKDFLPGMLDATAGGVVQADEQLLESAR 86
>YFCD_ECO57 (P65558) Putative Nudix hydrolase yfcD (EC 3.6.-.-)| Length = 180 Score = 41.2 bits (95), Expect = 0.001 Identities = 20/51 (39%), Positives = 32/51 (62%) Frame = +3 Query: 282 HRAVHVWIYCESTGELLLQRRADCKDSWPGQWDISSAGHVSAGDSSLSSAR 434 HRA ++ ++ + G++L+QRR + KD PG D ++ G V A + L SAR Sbjct: 37 HRATYIVVH-DGMGKILVQRRTETKDFLPGMLDATAGGVVQADEQLLESAR 86
>YFCD_SALTY (P65559) Putative Nudix hydrolase yfcD (EC 3.6.-.-)| Length = 184 Score = 41.2 bits (95), Expect = 0.001 Identities = 20/51 (39%), Positives = 32/51 (62%) Frame = +3 Query: 282 HRAVHVWIYCESTGELLLQRRADCKDSWPGQWDISSAGHVSAGDSSLSSAR 434 HRA ++ ++ + G++L+QRR + KD PG D ++ G V A + L SAR Sbjct: 38 HRATYIVVH-DGMGKILVQRRTETKDFLPGMLDATAGGVVQADEQLLESAR 87
>YFCD_SALTI (P65560) Putative Nudix hydrolase yfcD (EC 3.6.-.-)| Length = 184 Score = 41.2 bits (95), Expect = 0.001 Identities = 20/51 (39%), Positives = 32/51 (62%) Frame = +3 Query: 282 HRAVHVWIYCESTGELLLQRRADCKDSWPGQWDISSAGHVSAGDSSLSSAR 434 HRA ++ ++ + G++L+QRR + KD PG D ++ G V A + L SAR Sbjct: 38 HRATYIVVH-DGMGKILVQRRTETKDFLPGMLDATAGGVVQADEQLLESAR 87
>IDI1_PHARH (O42641) Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) (IPP| isomerase) (Isopentenyl pyrophosphate isomerase) Length = 251 Score = 40.8 bits (94), Expect = 0.001 Identities = 19/39 (48%), Positives = 25/39 (64%) Frame = +3 Query: 282 HRAVHVWIYCESTGELLLQRRADCKDSWPGQWDISSAGH 398 HRA V+++ S G LLLQRRAD K ++PG W + H Sbjct: 66 HRAFSVFLFRPSDGALLLQRRADEKITFPGMWTNTCCSH 104
>IDI_CORGL (Q8NN99) Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) (IPP| isomerase) (Isopentenyl pyrophosphate isomerase) (IPP:DMAPP isomerase) Length = 189 Score = 40.8 bits (94), Expect = 0.001 Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 1/63 (1%) Frame = +3 Query: 249 PRSEVH-RDGDYHRAVHVWIYCESTGELLLQRRADCKDSWPGQWDISSAGHVSAGDSSLS 425 P++ VH +D H A +I GELL+ RRA K +WPG W S GH +++ Sbjct: 22 PKATVHTKDTPLHFAFSTYIL-NPRGELLVTRRALSKKTWPGVWTNSMCGHPGPDETNAD 80 Query: 426 SAR 434 + R Sbjct: 81 AIR 83
>IDI_HALSA (Q9HP40) Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) (IPP| isomerase) (Isopentenyl pyrophosphate isomerase) (IPP:DMAPP isomerase) Length = 213 Score = 40.0 bits (92), Expect = 0.002 Identities = 24/74 (32%), Positives = 36/74 (48%) Frame = +3 Query: 213 LTAAGDKTGVSKPRSEVHRDGDYHRAVHVWIYCESTGELLLQRRADCKDSWPGQWDISSA 392 +T ++TG++ DG HRA ++ E G +LL +RAD K W WD + A Sbjct: 35 VTPDDERTGLANRLDAHTGDGVRHRAFTCLLFDED-GRVLLAQRADRKRLWDTHWDGTVA 93 Query: 393 GHVSAGDSSLSSAR 434 H G S + + R Sbjct: 94 SHPIEGQSQVDATR 107
>IDI_AGRME (Q8KP37) Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) (IPP| isomerase) (Isopentenyl pyrophosphate isomerase) (IPP:DMAPP isomerase) Length = 206 Score = 40.0 bits (92), Expect = 0.002 Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Frame = +3 Query: 198 ERLDVLTAAGDKTGVSKPRSEVH-RDGDYHRAVHVWIYCESTGELLLQRRADCKDSWPGQ 374 E + +L AG++ G + P+S VH D H A ++ + G LL+ RRA K +WPG Sbjct: 23 ELVVLLDEAGNQIGTA-PKSSVHGADTALHLAFSCHVF-DDDGRLLVTRRALGKVAWPGV 80 Query: 375 WDISSAGH 398 W S GH Sbjct: 81 WTNSFCGH 88
>IDI_SALTY (Q8ZM82) Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) (IPP| isomerase) (Isopentenyl pyrophosphate isomerase) (IPP:DMAPP isomerase) Length = 181 Score = 40.0 bits (92), Expect = 0.002 Identities = 18/46 (39%), Positives = 27/46 (58%) Frame = +3 Query: 282 HRAVHVWIYCESTGELLLQRRADCKDSWPGQWDISSAGHVSAGDSS 419 H A W++ E G+LL+ RR+ K +WPG W S GH G+++ Sbjct: 32 HLAFSCWLFNED-GQLLVTRRSLSKKAWPGVWTNSVCGHPQQGETT 76
>IDI_SALTI (Q8Z3X9) Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) (IPP| isomerase) (Isopentenyl pyrophosphate isomerase) (IPP:DMAPP isomerase) Length = 181 Score = 40.0 bits (92), Expect = 0.002 Identities = 18/46 (39%), Positives = 27/46 (58%) Frame = +3 Query: 282 HRAVHVWIYCESTGELLLQRRADCKDSWPGQWDISSAGHVSAGDSS 419 H A W++ E G+LL+ RR+ K +WPG W S GH G+++ Sbjct: 32 HLAFSCWLFNED-GQLLVTRRSLSKKAWPGVWTNSVCGHPQQGETT 76
>IDI_SALPA (Q5PL31) Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) (IPP| isomerase) (Isopentenyl pyrophosphate isomerase) (IPP:DMAPP isomerase) Length = 181 Score = 40.0 bits (92), Expect = 0.002 Identities = 18/46 (39%), Positives = 27/46 (58%) Frame = +3 Query: 282 HRAVHVWIYCESTGELLLQRRADCKDSWPGQWDISSAGHVSAGDSS 419 H A W++ E G+LL+ RR+ K +WPG W S GH G+++ Sbjct: 32 HLAFSCWLFNED-GQLLVTRRSLSKKAWPGVWTNSVCGHPQQGETT 76
>IDI_SALCH (Q57K77) Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) (IPP| isomerase) (Isopentenyl pyrophosphate isomerase) (IPP:DMAPP isomerase) Length = 181 Score = 40.0 bits (92), Expect = 0.002 Identities = 18/46 (39%), Positives = 27/46 (58%) Frame = +3 Query: 282 HRAVHVWIYCESTGELLLQRRADCKDSWPGQWDISSAGHVSAGDSS 419 H A W++ E G+LL+ RR+ K +WPG W S GH G+++ Sbjct: 32 HLAFSCWLFNED-GQLLVTRRSLSKKAWPGVWTNSVCGHPQQGETT 76
>IDI_STRAW (Q82MJ7) Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) (IPP| isomerase) (Isopentenyl pyrophosphate isomerase) (IPP:DMAPP isomerase) Length = 197 Score = 40.0 bits (92), Expect = 0.002 Identities = 24/76 (31%), Positives = 39/76 (51%) Frame = +3 Query: 204 LDVLTAAGDKTGVSKPRSEVHRDGDYHRAVHVWIYCESTGELLLQRRADCKDSWPGQWDI 383 L+++ G G ++ + G HRA V+++ E G LLLQ+RA K PG W Sbjct: 22 LELVDENGTTIGTAEKLAAHQPPGQLHRAFSVFLFDEQ-GRLLLQQRALGKYHSPGVWSN 80 Query: 384 SSAGHVSAGDSSLSSA 431 + GH G++ ++A Sbjct: 81 TCCGHPYPGEAPFAAA 96
>IDI_BRELN (Q9KK75) Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) (IPP| isomerase) (Isopentenyl pyrophosphate isomerase) (IPP:DMAPP isomerase) Length = 182 Score = 39.7 bits (91), Expect = 0.003 Identities = 23/73 (31%), Positives = 35/73 (47%) Frame = +3 Query: 198 ERLDVLTAAGDKTGVSKPRSEVHRDGDYHRAVHVWIYCESTGELLLQRRADCKDSWPGQW 377 E + ++ AGD GV +++VH + G LL+ RRA K +WPG W Sbjct: 2 EMVVLVDHAGDPIGVQS-KADVHGQSTPRHLAFSCHVVDEQGRLLVTRRALKKRTWPGVW 60 Query: 378 DISSAGHVSAGDS 416 S GH + G++ Sbjct: 61 TNSFCGHPAPGET 73
>IDI_STRCO (Q9X7Q6) Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) (IPP| isomerase) (Isopentenyl pyrophosphate isomerase) (IPP:DMAPP isomerase) Length = 197 Score = 38.5 bits (88), Expect = 0.007 Identities = 24/76 (31%), Positives = 39/76 (51%) Frame = +3 Query: 204 LDVLTAAGDKTGVSKPRSEVHRDGDYHRAVHVWIYCESTGELLLQRRADCKDSWPGQWDI 383 L+++ G G ++ S G HRA V+++ E G LL+Q+RA K PG W Sbjct: 22 LELVDENGVTIGTAEKLSAHQPPGRLHRAFSVFLFDER-GRLLIQQRALGKYHSPGVWSN 80 Query: 384 SSAGHVSAGDSSLSSA 431 + GH G++ ++A Sbjct: 81 TCCGHPYPGEAPFAAA 96
>IDI1_AZOSE (Q5P011) Isopentenyl-diphosphate delta-isomerase 1 (EC 5.3.3.2)| (IPP isomerase 1) (Isopentenyl pyrophosphate isomerase 1) (IPP:DMAPP isomerase 1) Length = 177 Score = 37.7 bits (86), Expect = 0.012 Identities = 20/57 (35%), Positives = 29/57 (50%) Frame = +3 Query: 264 HRDGDYHRAVHVWIYCESTGELLLQRRADCKDSWPGQWDISSAGHVSAGDSSLSSAR 434 HR G HRA+ ++I+ +S LLLQ+RA K G W + H + +AR Sbjct: 24 HRSGSLHRAISIFIF-DSADRLLLQKRAASKYHSAGLWSNTCCSHPRPREECARAAR 79
>IDI_PROAC (Q6A5Z1) Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) (IPP| isomerase) (Isopentenyl pyrophosphate isomerase) (IPP:DMAPP isomerase) Length = 199 Score = 37.7 bits (86), Expect = 0.012 Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 3/64 (4%) Frame = +3 Query: 249 PRSEVHRDGDYHRAVHVWIYC---ESTGELLLQRRADCKDSWPGQWDISSAGHVSAGDSS 419 PR+ VH H H+ C + G +L+ RRA K +WPG W + GH G++ Sbjct: 35 PRATVHSQ---HTPRHLAFSCHVLDVGGRVLVTRRALTKVAWPGVWTNTCCGHPRVGETI 91 Query: 420 LSSA 431 + +A Sbjct: 92 IDAA 95
>IDI2_AZOSE (Q5NWG5) Isopentenyl-diphosphate delta-isomerase 2 (EC 5.3.3.2)| (IPP isomerase 2) (Isopentenyl pyrophosphate isomerase 2) (IPP:DMAPP isomerase 2) Length = 189 Score = 36.6 bits (83), Expect = 0.027 Identities = 22/80 (27%), Positives = 41/80 (51%) Frame = +3 Query: 195 EERLDVLTAAGDKTGVSKPRSEVHRDGDYHRAVHVWIYCESTGELLLQRRADCKDSWPGQ 374 E+++ ++ +K G + + H+ G HRA+ ++++ +S L+LQRRA K G Sbjct: 2 EDQVILVDEHDNKVGFAG-KMAAHQRGALHRAISIFVF-DSHSRLMLQRRAAGKYHSGGL 59 Query: 375 WDISSAGHVSAGDSSLSSAR 434 W + H + S +AR Sbjct: 60 WSNTCCSHPRPNEESADAAR 79
>IDI1_PHOLL (Q7N1V4) Isopentenyl-diphosphate delta-isomerase 1 (EC 5.3.3.2)| (IPP isomerase 1) (Isopentenyl pyrophosphate isomerase 1) (IPP:DMAPP isomerase 1) Length = 176 Score = 35.8 bits (81), Expect = 0.046 Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Frame = +3 Query: 258 EVHRDGDY-HRAVHVWIYCESTGELLLQRRADCKDSWPGQWDISSAGH 398 + H +GD+ HRA +I S E+ +Q+RA K WPG W S H Sbjct: 21 DAHLNGDHLHRAFSCFII-NSKNEVYIQQRAQSKLLWPGYWSNSYCSH 67
>IDI_LEIXX (Q6AC73) Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) (IPP| isomerase) (Isopentenyl pyrophosphate isomerase) (IPP:DMAPP isomerase) Length = 185 Score = 35.0 bits (79), Expect = 0.079 Identities = 15/35 (42%), Positives = 21/35 (60%) Frame = +3 Query: 312 ESTGELLLQRRADCKDSWPGQWDISSAGHVSAGDS 416 + G +L+ RRA K +WPG W S GH + G+S Sbjct: 43 DGDGRILVTRRALGKATWPGVWTNSFCGHPALGES 77
>IDI_VIBF1 (Q5E7U8) Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) (IPP| isomerase) (Isopentenyl pyrophosphate isomerase) (IPP:DMAPP isomerase) Length = 181 Score = 34.7 bits (78), Expect = 0.10 Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%) Frame = +3 Query: 198 ERLDVLTAAGDKTGVSKPRSEVHRDGDYHRAVHVWIYCEST--GELLLQRRADCKDSWPG 371 E + ++ GD G + + E H G H A V +Y E+ E LLQ+RA+CK Sbjct: 3 EYVVLVNEQGDAIGTME-KLEAHEKGLLHLAFSVLLYRETDLGKEFLLQKRAECKYHSKN 61 Query: 372 QWDISSAGH 398 +W + H Sbjct: 62 KWSNTCCSH 70
>IDI1_YEAST (P15496) Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) (IPP| isomerase) (Isopentenyl pyrophosphate isomerase) Length = 287 Score = 33.9 bits (76), Expect = 0.18 Identities = 21/50 (42%), Positives = 27/50 (54%) Frame = +3 Query: 273 GDYHRAVHVWIYCESTGELLLQRRADCKDSWPGQWDISSAGHVSAGDSSL 422 G HRA V+I+ E GELLLQ+RA K ++P W + H D L Sbjct: 100 GLLHRAFSVFIFNEQ-GELLLQQRATEKITFPDLWTNTCCSHPLCIDDEL 148
>YFCD_ANASP (Q8YKE7) Putative Nudix hydrolase all7351 (EC 3.6.-.-)| Length = 169 Score = 32.7 bits (73), Expect = 0.39 Identities = 23/73 (31%), Positives = 37/73 (50%) Frame = +3 Query: 198 ERLDVLTAAGDKTGVSKPRSEVHRDGDYHRAVHVWIYCESTGELLLQRRADCKDSWPGQW 377 E LD++ + G K RSE++ G + V S G+L + RR+ K +P Sbjct: 6 EILDIVDESDCVIG-QKKRSEIYSQGLCNFRVVNSFVVNSLGKLWIPRRSAQKRIFPLCL 64 Query: 378 DISSAGHVSAGDS 416 D+S GHV +G++ Sbjct: 65 DVSMGGHVESGET 77
>TNR3_SCHPO (P41888) Thiamine pyrophosphokinase (EC 2.7.6.2) (TPK) (Thiamine| kinase) Length = 569 Score = 32.3 bits (72), Expect = 0.51 Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 9/70 (12%) Frame = +3 Query: 246 KPRSEVHRDGDY-----HRAVHVWIYCESTGE----LLLQRRADCKDSWPGQWDISSAGH 398 KP V R G + VH +Y +T E + + RR+ K +WP D S AG Sbjct: 117 KPVLAVERGGFWLFGFLSTGVHCTMYIPATKEHPLRIWVPRRSPTKQTWPNYLDNSVAGG 176 Query: 399 VSAGDSSLSS 428 ++ GDS + + Sbjct: 177 IAHGDSVIGT 186
>IDI_RHOCA (P26173) Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) (IPP| isomerase) (Isopentenyl pyrophosphate isomerase) (IPP:DMAPP isomerase) (Bacteriochlorophyll synthase 20 kDa chain) Length = 176 Score = 30.8 bits (68), Expect = 1.5 Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 2/67 (2%) Frame = +3 Query: 237 GVSKP--RSEVHRDGDYHRAVHVWIYCESTGELLLQRRADCKDSWPGQWDISSAGHVSAG 410 GV +P + E HR G H A+ V++ ++LLQ+RA K PG W + H G Sbjct: 12 GVLQPVEKLEAHRKGLRHLAISVFV--TRGNKVLLQQRALSKYHTPGLWANTCCTHPYWG 69 Query: 411 DSSLSSA 431 + + + A Sbjct: 70 EDAPTCA 76
>IDI_HALMA (Q5UX45) Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) (IPP| isomerase) (Isopentenyl pyrophosphate isomerase) (IPP:DMAPP isomerase) Length = 187 Score = 30.4 bits (67), Expect = 1.9 Identities = 18/53 (33%), Positives = 26/53 (49%) Frame = +3 Query: 270 DGDYHRAVHVWIYCESTGELLLQRRADCKDSWPGQWDISSAGHVSAGDSSLSS 428 DG HRA ++ E+ LL QR A+ K W WD + A H G + + + Sbjct: 39 DGVRHRAFTALLFDENDRILLAQRAAN-KRLWDTHWDGTVASHPVEGQTQVEA 90
>IDI1_RAT (O35760) Isopentenyl-diphosphate delta-isomerase 1 (EC 5.3.3.2)| (IPP isomerase 1) (Isopentenyl pyrophosphate isomerase 1) (IPPI1) Length = 227 Score = 30.4 bits (67), Expect = 1.9 Identities = 16/42 (38%), Positives = 26/42 (61%) Frame = +3 Query: 273 GDYHRAVHVWIYCESTGELLLQRRADCKDSWPGQWDISSAGH 398 G HRA V+++ + +LLLQ+R+D K ++PG + S H Sbjct: 48 GLIHRAFSVFLF-NTENKLLLQQRSDAKITFPGCFTNSCCSH 88
>IDI1_MOUSE (P58044) Isopentenyl-diphosphate delta-isomerase 1 (EC 5.3.3.2)| (IPP isomerase 1) (Isopentenyl pyrophosphate isomerase 1) (IPPI1) Length = 227 Score = 30.4 bits (67), Expect = 1.9 Identities = 16/42 (38%), Positives = 26/42 (61%) Frame = +3 Query: 273 GDYHRAVHVWIYCESTGELLLQRRADCKDSWPGQWDISSAGH 398 G HRA V+++ + +LLLQ+R+D K ++PG + S H Sbjct: 48 GLLHRAFSVFLF-NTENKLLLQQRSDAKITFPGCFTNSCCSH 88
>IDI1_MESAU (O35586) Isopentenyl-diphosphate delta-isomerase 1 (EC 5.3.3.2)| (IPP isomerase 1) (Isopentenyl pyrophosphate isomerase 1) (IPPI1) Length = 227 Score = 30.4 bits (67), Expect = 1.9 Identities = 16/42 (38%), Positives = 26/42 (61%) Frame = +3 Query: 273 GDYHRAVHVWIYCESTGELLLQRRADCKDSWPGQWDISSAGH 398 G HRA V+++ + +LLLQ+R+D K ++PG + S H Sbjct: 48 GLLHRAFSVFLF-NTENKLLLQQRSDAKITFPGCFTNSCCSH 88
>IDI1_HUMAN (Q13907) Isopentenyl-diphosphate delta-isomerase 1 (EC 5.3.3.2)| (IPP isomerase 1) (Isopentenyl pyrophosphate isomerase 1) (IPPI1) Length = 227 Score = 30.0 bits (66), Expect = 2.5 Identities = 16/53 (30%), Positives = 30/53 (56%) Frame = +3 Query: 273 GDYHRAVHVWIYCESTGELLLQRRADCKDSWPGQWDISSAGHVSAGDSSLSSA 431 G HRA V+++ + +LLLQ+R+D K ++PG + + H + + L + Sbjct: 48 GLLHRAFSVFLF-NTENKLLLQQRSDAKITFPGCFTNTCCSHPLSNPAELEES 99
>IDI_RHOS4 (Q9Z5D3) Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) (IPP| isomerase) (Isopentenyl pyrophosphate isomerase) (IPP:DMAPP isomerase) Length = 177 Score = 29.6 bits (65), Expect = 3.3 Identities = 18/58 (31%), Positives = 27/58 (46%) Frame = +3 Query: 258 EVHRDGDYHRAVHVWIYCESTGELLLQRRADCKDSWPGQWDISSAGHVSAGDSSLSSA 431 E H+ G H A+ V++ +L+QRRA K PG W + H G+ + A Sbjct: 20 EAHQRGLRHMAISVFVMAGEA--VLIQRRAAGKYHTPGLWANTCCTHPRWGEEAADCA 75
>IDI_SILPO (Q5LWT6) Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) (IPP| isomerase) (Isopentenyl pyrophosphate isomerase) (IPP:DMAPP isomerase) Length = 180 Score = 29.3 bits (64), Expect = 4.3 Identities = 19/58 (32%), Positives = 29/58 (50%) Frame = +3 Query: 258 EVHRDGDYHRAVHVWIYCESTGELLLQRRADCKDSWPGQWDISSAGHVSAGDSSLSSA 431 E H G H+AV V+ + ++L+QRRA K PG W + H +S+ + A Sbjct: 20 EAHEKGLKHKAVSVFAVRDM--DILIQRRALGKYHTPGLWANTCCTHPDWDESASTCA 75
>IDI1_MACFA (Q4R4W5) Isopentenyl-diphosphate delta-isomerase 1 (EC 5.3.3.2)| (IPP isomerase 1) (Isopentenyl pyrophosphate isomerase 1) (IPPI1) Length = 227 Score = 29.3 bits (64), Expect = 4.3 Identities = 15/42 (35%), Positives = 26/42 (61%) Frame = +3 Query: 273 GDYHRAVHVWIYCESTGELLLQRRADCKDSWPGQWDISSAGH 398 G HRA V+++ + +LLLQ+R+D K ++PG + + H Sbjct: 48 GLLHRAFSVFLF-NTENKLLLQQRSDAKITFPGCFTNTCCSH 88
>C4BP_RAT (Q63514) C4b-binding protein alpha chain precursor (C4bp)| Length = 558 Score = 28.9 bits (63), Expect = 5.7 Identities = 11/31 (35%), Positives = 17/31 (54%) Frame = +1 Query: 37 PVAICSFETCTNIPTNHPSQVTTHPRKRSSE 129 PV +C +CT+IP + + T PR R + Sbjct: 254 PVPVCELNSCTDIPDIPNAALITSPRPRKED 284
>Y079_DEIRA (Q9RY71) Putative Nudix hydrolase DR0079 (EC 3.6.-.-)| Length = 171 Score = 28.9 bits (63), Expect = 5.7 Identities = 20/74 (27%), Positives = 38/74 (51%) Frame = +3 Query: 195 EERLDVLTAAGDKTGVSKPRSEVHRDGDYHRAVHVWIYCESTGELLLQRRADCKDSWPGQ 374 +ERLD++ + G R++ + R V+ ++ S G+L + RR+ K +P Sbjct: 6 DERLDLVNERDEVVGQIL-RTDPALRWERVRVVNAFLR-NSQGQLWIPRRSPSKSLFPNA 63 Query: 375 WDISSAGHVSAGDS 416 D+S G V +G++ Sbjct: 64 LDVSVGGAVQSGET 77
>YQCC_BACSU (P45938) Hypothetical protein yqcC| Length = 366 Score = 28.5 bits (62), Expect = 7.4 Identities = 15/41 (36%), Positives = 20/41 (48%) Frame = +3 Query: 273 GDYHRAVHVWIYCESTGELLLQRRADCKDSWPGQWDISSAG 395 GDY V +W YC G+ L+R D K+ +DI G Sbjct: 322 GDY---VEIWCYCNYGGDETLKRAVDDKNGVFNFFDIQELG 359
>IDI1_PONPY (Q5R8R6) Isopentenyl-diphosphate delta-isomerase 1 (EC 5.3.3.2)| (IPP isomerase 1) (Isopentenyl pyrophosphate isomerase 1) (IPPI1) Length = 227 Score = 28.1 bits (61), Expect = 9.7 Identities = 15/42 (35%), Positives = 25/42 (59%) Frame = +3 Query: 273 GDYHRAVHVWIYCESTGELLLQRRADCKDSWPGQWDISSAGH 398 G HRA V+++ + +LLLQ+R+D K + PG + + H Sbjct: 48 GLLHRAFSVFLF-NTENKLLLQQRSDAKITLPGCFTNTCCSH 88 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.316 0.123 0.397 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 40,969,079 Number of Sequences: 219361 Number of extensions: 558482 Number of successful extensions: 1601 Number of sequences better than 10.0: 61 Number of HSP's better than 10.0 without gapping: 1585 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1596 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2511994855 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
