>EBM_LILLO (Q5H7P5) Mannosylglycoprotein endo-beta-mannosidase (EC 3.2.1.152)|
           (Endo-beta-mannosidase) [Contains: Mannosylglycoprotein
           endo-beta-mannosidase 31 kDa subunit;
           Mannosylglycoprotein endo-beta-mannosidase 28 kDa
           subunit; Mannosylglycoprotein end
          Length = 952

 Score =  192 bits (487), Expect = 4e-49
 Identities = 88/117 (75%), Positives = 101/117 (86%)
 Frame = +3

Query: 108 GKLVLDTGWLAARSTEVSLTGVDLTTTHPPDASVAAPWMHAAVPGTVLGTLLKNKLIPDP 287
           GK VLD+GWLAARSTE+ LTGV LTTT PP  + +APW+ A VPGTVLGTLLKNKL+PDP
Sbjct: 1   GKQVLDSGWLAARSTELELTGVQLTTTRPPSGT-SAPWIEAVVPGTVLGTLLKNKLVPDP 59

Query: 288 FYGLNNEAIIDIADSGRDYYTFWFFTTFQCAPATNQHVSLNFRGVNYSAEVYINGHK 458
           FYGLNNE I+DI DSGR+YYTFWFF +F+C  + NQHVSLNFR +NYSAEVY+NGHK
Sbjct: 60  FYGLNNEGILDIYDSGREYYTFWFFKSFECKLSENQHVSLNFRAINYSAEVYLNGHK 116

>EBM_ARATH (Q75W54) Mannosylglycoprotein endo-beta-mannosidase (EC 3.2.1.152)|
           (Endo-beta-mannosidase) (AtEBM) [Contains:
           Mannosylglycoprotein endo-beta-mannosidase 31 kDa
           subunit; Mannosylglycoprotein endo-beta-mannosidase 28
           kDa subunit; Mannosylglycopro
          Length = 943

 Score =  186 bits (473), Expect = 2e-47
 Identities = 86/118 (72%), Positives = 97/118 (82%)
 Frame = +3

Query: 105 VGKLVLDTGWLAARSTEVSLTGVDLTTTHPPDASVAAPWMHAAVPGTVLGTLLKNKLIPD 284
           +GK VLD GW+AARSTEV + GV LTTT+PP  S  + WM AAVPGTVLGTL+KNK IPD
Sbjct: 3   IGKTVLDFGWIAARSTEVDVNGVQLTTTNPPAISSESRWMEAAVPGTVLGTLVKNKAIPD 62

Query: 285 PFYGLNNEAIIDIADSGRDYYTFWFFTTFQCAPATNQHVSLNFRGVNYSAEVYINGHK 458
           PFYGL NEAI DIADSGRDYYTFWFFT FQC    NQ+V LNFR +NYSA+V++NGHK
Sbjct: 63  PFYGLENEAITDIADSGRDYYTFWFFTKFQCQRLLNQYVHLNFRAINYSAQVFVNGHK 120

>MANBA_BOVIN (Q29444) Beta-mannosidase precursor (EC 3.2.1.25) (Lysosomal beta A|
           mannosidase) (Mannanase) (Mannase)
          Length = 879

 Score = 35.4 bits (80), Expect = 0.070
 Identities = 26/87 (29%), Positives = 39/87 (44%)
 Frame = +3

Query: 189 HPPDASVAAPWMHAAVPGTVLGTLLKNKLIPDPFYGLNNEAIIDIADSGRDYYTFWFFTT 368
           H  + S+  P   A VPG V   L   ++I DP+Y  NN   +D      D +T+     
Sbjct: 32  HSGNGSLQLP---ATVPGCVHSALFNKRIIKDPYYRFNN---LDYRWIALDNWTYIKKFK 85

Query: 369 FQCAPATNQHVSLNFRGVNYSAEVYIN 449
                +T   V+L F G++  A V +N
Sbjct: 86  LHSDMSTWSKVNLVFEGIDTVAVVLLN 112

>MANBA_CAPHI (Q95327) Beta-mannosidase precursor (EC 3.2.1.25) (Lysosomal beta A|
           mannosidase) (Mannanase) (Mannase)
          Length = 879

 Score = 34.3 bits (77), Expect = 0.16
 Identities = 26/87 (29%), Positives = 39/87 (44%)
 Frame = +3

Query: 189 HPPDASVAAPWMHAAVPGTVLGTLLKNKLIPDPFYGLNNEAIIDIADSGRDYYTFWFFTT 368
           H  + S+  P   AAVPG V   L   ++I DP+Y  NN   +D      D +T+     
Sbjct: 32  HNGNGSLQLP---AAVPGCVHSALFNKRIIKDPYYRFNN---LDYRWIALDNWTYIKKFK 85

Query: 369 FQCAPATNQHVSLNFRGVNYSAEVYIN 449
                +    V+L F G++  A V +N
Sbjct: 86  LHSDMSEWNKVNLVFEGIDTVAVVLLN 112

>HN_PI4HA (P21526) Hemagglutinin-neuraminidase (EC 3.2.1.18)|
          Length = 573

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 23/71 (32%), Positives = 34/71 (47%)
 Frame = +3

Query: 189 HPPDASVAAPWMHAAVPGTVLGTLLKNKLIPDPFYGLNNEAIIDIADSGRDYYTFWFFTT 368
           +PP +S    W+H A PG   G L    LI   + GL  +++I    SG+  Y F   T 
Sbjct: 288 NPPGSS--RDWVHIA-PGVGSGLLYAKLLIFPLYGGLTEKSVIHNNQSGK--YFFPNSTK 342

Query: 369 FQCAPATNQHV 401
            QC  +T + +
Sbjct: 343 LQCRNSTMEKI 353

>POLN_SPDV (Q8JJX1) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)|
            [Contains: P123; mRNA capping enzyme nsP1 (EC 2.1.1.-)
            (EC 2.7.7.-) (Nonstructural protein 1);
            Protease/triphosphatase/NTPase/helicase nsP2 (EC
            3.4.22.-) (EC 3.1.3.33) (EC 3.6.1.1
          Length = 2601

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -3

Query: 235  TAACIHGAATEASGGWVVVRSTPVRDTSVERA 140
            T+AC HG    A GG  +V++  + D   ERA
Sbjct: 1307 TSACKHGVERTAKGGVFIVKAYGMADRRTERA 1338

>POLN_SLDV (Q8QL53) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)|
            [Contains: P123; mRNA capping enzyme nsP1 (EC 2.1.1.-)
            (EC 2.7.7.-) (Nonstructural protein 1);
            Protease/triphosphatase/NTPase/helicase nsP2 (EC
            3.4.22.-) (EC 3.1.3.33) (EC 3.6.1.1
          Length = 2593

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -3

Query: 235  TAACIHGAATEASGGWVVVRSTPVRDTSVERA 140
            T+AC HG    A GG  +V++  + D   ERA
Sbjct: 1306 TSACKHGVERTAKGGVFIVKAYGMADRRTERA 1337


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,871,750
Number of Sequences: 219361
Number of extensions: 685935
Number of successful extensions: 2034
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2033
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)