ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl02e09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC137622.2| Oryza sativa (japonica cultivar-group) chromosome... 121 2e-24
2gb|AC135430.2| Oryza sativa (japonica cultivar-group) chromosome... 121 2e-24
3dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 121 2e-24
4gb|AC104271.2| Oryza sativa (japonica cultivar-group) chromosome... 107 3e-20
5gb|AC136225.2| Oryza sativa (japonica cultivar-group) chromosome... 107 3e-20
6dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.006
7gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 50 0.006
8emb|BX276100.4|CNS09S4X Oryza sativa chromosome 12, . Partial se... 50 0.006
9gb|BC035920.1| Homo sapiens mitogen-activated protein kinase 8 i... 46 0.099
10gb|BC068470.1| Homo sapiens mitogen-activated protein kinase 8 i... 46 0.099
11gb|AC068385.9| Homo sapiens chromosome 11, clone RP11-618K13, co... 46 0.099
12ref|NM_005456.2| Homo sapiens mitogen-activated protein kinase 8... 46 0.099
13emb|AJ304445.1|HSA304445 Homo sapiens mitogen-activated protein ... 46 0.099
14ref|XM_471574.1| Oryza sativa (japonica cultivar-group), predic... 44 0.39
15gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 44 0.39
16emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 44 0.39
17emb|AL662995.2|OSJN00202 Oryza sativa genomic DNA, chromosome 4,... 44 0.39
18gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 44 0.39
19dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.39
20gb|AY943952.1| Streptomyces sp. F11 plasmid pFP11, complete sequ... 44 0.39
21gb|AC153363.4| Mus musculus BAC clone RP23-5I6 from chromosome 9... 42 1.5
22dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
23gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 1.5
24dbj|AP005800.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
25emb|AL954854.3|CNS08CD8 Oryza sativa chromosome 12, . BAC OSJNBa... 42 1.5
26gb|AC122542.3| Mus musculus BAC clone RP24-572J16 from 9, comple... 42 1.5
27ref|NM_102090.2| Arabidopsis thaliana 3-deoxy-7-phosphoheptulona... 40 6.1
28ref|XM_474072.1| Oryza sativa (japonica cultivar-group), predic... 40 6.1
29ref|XM_466652.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.1
30gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 40 6.1
31gb|BC056612.1| Mus musculus transmembrane protein 24, mRNA (cDNA... 40 6.1
32gb|BC049875.1| Mus musculus transmembrane protein 24, mRNA (cDNA... 40 6.1
33gb|BC035271.1| Mus musculus transmembrane protein 24, mRNA (cDNA... 40 6.1
34gb|AC122428.4| Mus musculus BAC clone RP24-175C20 from chromosom... 40 6.1
35gb|BC050398.2| Homo sapiens PRP40 pre-mRNA processing factor 40 ... 40 6.1
36gb|BC031917.1| Homo sapiens PRP40 pre-mRNA processing factor 40 ... 40 6.1
37gb|BC067364.1| Homo sapiens PRP40 pre-mRNA processing factor 40 ... 40 6.1
38ref|NM_001031698.1| Homo sapiens PRP40 pre-mRNA processing facto... 40 6.1
39ref|NM_012272.1| Homo sapiens PRP40 pre-mRNA processing factor 4... 40 6.1
40emb|BX014092.1|CNS08J1C Single read from an extremity of a full-... 40 6.1
41emb|BX014091.1|CNS08J1B Single read from an extremity of a full-... 40 6.1
42emb|CR555306.1| Azoarcus sp. EbN1 complete genome 40 6.1
43emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 6.1
44emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete ... 40 6.1
45emb|AL834216.1|HSM805637 Homo sapiens mRNA; cDNA DKFZp434O1520 (... 40 6.1
46emb|AL731607.3|OSJN00250 Oryza sativa genomic DNA, chromosome 4,... 40 6.1
47emb|AL606455.3|OSJN00015 Oryza sativa genomic DNA, chromosome 4,... 40 6.1
48emb|AL137459.1|HSM802172 Homo sapiens mRNA; cDNA DKFZp434H2121 (... 40 6.1
49dbj|AK153804.1| Mus musculus 3 days neonate thymus cDNA, RIKEN f... 40 6.1
50ref|XM_696883.1| PREDICTED: Danio rerio hypothetical protein LOC... 40 6.1
51ref|NM_027909.2| Mus musculus transmembrane protein 24 (Tmem24),... 40 6.1
52dbj|AK039220.1| Mus musculus adult male hypothalamus cDNA, RIKEN... 40 6.1
53gb|AC006551.6|AC006551 Arabidopsis thaliana chromosome I BAC F12... 40 6.1
54dbj|AK004920.1| Mus musculus adult male liver cDNA, RIKEN full-l... 40 6.1
55dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
56gb|AF304130.1|AF304130 Danio rerio transmembrane receptor Rounda... 40 6.1
57gb|AC020612.40| Homo sapiens 12 BAC RP11-133N21 (Roswell Park Ca... 40 6.1
58dbj|AP004811.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
59dbj|AP006438.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
60dbj|AP004881.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
61ref|XM_310474.2| Anopheles gambiae str. PEST ENSANGP00000019221 ... 40 6.1
62dbj|AK099756.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.1
63dbj|AK100467.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.1
64emb|AL442112.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 6.1
65emb|AL662934.3|OSJN00136 Oryza sativa genomic DNA, chromosome 4,... 40 6.1
66emb|BX667525.2|CNS09SC3 Oryza sativa chromosome 12, . Partial se... 40 6.1
67emb|AL731763.1|CNS07YQA Oryza sativa chromosome 12, . BAC OSJNBa... 40 6.1
68gb|AC124577.5| Mus musculus BAC clone RP23-162P10 from 9, comple... 40 6.1
69gb|BC060156.1| Mus musculus transmembrane protein 24, mRNA (cDNA... 40 6.1
70ref|NM_131481.1| Danio rerio roundabout homolog 1 (robo1), mRNA 40 6.1 
>gb|AC137622.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0118N20, complete sequence
          Length = 146139

 Score =  121 bits (61), Expect = 2e-24
 Identities = 124/145 (85%)
 Strand = Plus / Minus

                                                                         
Query: 292   cccccacggccttctccttcaacgtggccctccgcttcttcgcggcctcccgcccacgca 351
             ||||||| |||||||||| |||||| ||| |||||||||||||  ||||||| || | ||
Sbjct: 64977 cccccaccgccttctcctacaacgtcgccatccgcttcttcgcctcctcccgtccccaca 64918

                                                                         
Query: 352   ccaccctccagctctccctccgcatgctccgcgccgcgctccgcccggacgcctacacgc 411
             || | ||||  |||| ||||| |||||| ||| ||||| ||||||||||| |||||||||
Sbjct: 64917 cctcgctccgcctcttcctccacatgcttcgctccgcgatccgcccggactcctacacgc 64858

                                      
Query: 412   tcccgttcctcctcctcgctgccgc 436
             |||| |||||||||||||| |||||
Sbjct: 64857 tccctttcctcctcctcgccgccgc 64833



 Score = 46.1 bits (23), Expect = 0.099
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 148   agcagctgcacgcccacctcctccacc 174
             ||||||| |||||||||||||||||||
Sbjct: 65127 agcagctccacgcccacctcctccacc 65101
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>gb|AC135430.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0671E09,
             complete sequence
          Length = 158472

 Score =  121 bits (61), Expect = 2e-24
 Identities = 124/145 (85%)
 Strand = Plus / Minus

                                                                         
Query: 292   cccccacggccttctccttcaacgtggccctccgcttcttcgcggcctcccgcccacgca 351
             ||||||| |||||||||| |||||| ||| |||||||||||||  ||||||| || | ||
Sbjct: 16407 cccccaccgccttctcctacaacgtcgccatccgcttcttcgcctcctcccgtccccaca 16348

                                                                         
Query: 352   ccaccctccagctctccctccgcatgctccgcgccgcgctccgcccggacgcctacacgc 411
             || | ||||  |||| ||||| |||||| ||| ||||| ||||||||||| |||||||||
Sbjct: 16347 cctcgctccgcctcttcctccacatgcttcgctccgcgatccgcccggactcctacacgc 16288

                                      
Query: 412   tcccgttcctcctcctcgctgccgc 436
             |||| |||||||||||||| |||||
Sbjct: 16287 tccctttcctcctcctcgccgccgc 16263



 Score = 46.1 bits (23), Expect = 0.099
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 148   agcagctgcacgcccacctcctccacc 174
             ||||||| |||||||||||||||||||
Sbjct: 16557 agcagctccacgcccacctcctccacc 16531
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  121 bits (61), Expect = 2e-24
 Identities = 124/145 (85%)
 Strand = Plus / Minus

                                                                            
Query: 292      cccccacggccttctccttcaacgtggccctccgcttcttcgcggcctcccgcccacgca 351
                ||||||| |||||||||| |||||| ||| |||||||||||||  ||||||| || | ||
Sbjct: 13798905 cccccaccgccttctcctacaacgtcgccatccgcttcttcgcctcctcccgtccccaca 13798846

                                                                            
Query: 352      ccaccctccagctctccctccgcatgctccgcgccgcgctccgcccggacgcctacacgc 411
                || | ||||  |||| ||||| |||||| ||| ||||| ||||||||||| |||||||||
Sbjct: 13798845 cctcgctccgcctcttcctccacatgcttcgctccgcgatccgcccggactcctacacgc 13798786

                                         
Query: 412      tcccgttcctcctcctcgctgccgc 436
                |||| |||||||||||||| |||||
Sbjct: 13798785 tccctttcctcctcctcgccgccgc 13798761



 Score =  107 bits (54), Expect = 3e-20
 Identities = 129/154 (83%)
 Strand = Plus / Plus

                                                                            
Query: 295      ccacggccttctccttcaacgtggccctccgcttcttcgcggcctcccgcccacgcacca 354
                |||| |||||||||| |||||| ||| |||||||||||||  ||||||| || | |||| 
Sbjct: 14281229 ccaccgccttctcctacaacgtcgccatccgcttcttcgcttcctcccgtccccacacct 14281288

                                                                            
Query: 355      ccctccagctctccctccgcatgctccgcgccgcgctccgcccggacgcctacacgctcc 414
                | ||||  |||| ||||   ||||||||| |||  |||||||| ||| |||||||||| |
Sbjct: 14281289 cgctccgcctcttcctcgaaatgctccgctccgacctccgcccagactcctacacgcttc 14281348

                                                  
Query: 415      cgttcctcctcctcgctgccgcccgatgccccgc 448
                | |||||||||||||| |||||||||||||||||
Sbjct: 14281349 ctttcctcctcctcgccgccgcccgatgccccgc 14281382



 Score = 46.1 bits (23), Expect = 0.099
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                           
Query: 148      agcagctgcacgcccacctcctccacc 174
                ||||||| |||||||||||||||||||
Sbjct: 13799055 agcagctccacgcccacctcctccacc 13799029



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                                 
Query: 125      atgccactccctctccaccatacagcagctgcacgcccacctcctccac 173
                ||||| ||||||| || ||||  |||| || ||||||||||||||||||
Sbjct: 14281035 atgccgctccctcgccgccatcaagcaactccacgcccacctcctccac 14281083
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>gb|AC104271.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1308_D01,
             complete sequence
          Length = 117724

 Score =  107 bits (54), Expect = 3e-20
 Identities = 129/154 (83%)
 Strand = Plus / Plus

                                                                         
Query: 295   ccacggccttctccttcaacgtggccctccgcttcttcgcggcctcccgcccacgcacca 354
             |||| |||||||||| |||||| ||| |||||||||||||  ||||||| || | |||| 
Sbjct: 10015 ccaccgccttctcctacaacgtcgccatccgcttcttcgcttcctcccgtccccacacct 10074

                                                                         
Query: 355   ccctccagctctccctccgcatgctccgcgccgcgctccgcccggacgcctacacgctcc 414
             | ||||  |||| ||||   ||||||||| |||  |||||||| ||| |||||||||| |
Sbjct: 10075 cgctccgcctcttcctcgaaatgctccgctccgacctccgcccagactcctacacgcttc 10134

                                               
Query: 415   cgttcctcctcctcgctgccgcccgatgccccgc 448
             | |||||||||||||| |||||||||||||||||
Sbjct: 10135 ctttcctcctcctcgccgccgcccgatgccccgc 10168



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                             
Query: 125  atgccactccctctccaccatacagcagctgcacgcccacctcctccac 173
            ||||| ||||||| || ||||  |||| || ||||||||||||||||||
Sbjct: 9821 atgccgctccctcgccgccatcaagcaactccacgcccacctcctccac 9869
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>gb|AC136225.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0022L07,
              complete sequence
          Length = 142134

 Score =  107 bits (54), Expect = 3e-20
 Identities = 129/154 (83%)
 Strand = Plus / Plus

                                                                          
Query: 295    ccacggccttctccttcaacgtggccctccgcttcttcgcggcctcccgcccacgcacca 354
              |||| |||||||||| |||||| ||| |||||||||||||  ||||||| || | |||| 
Sbjct: 140562 ccaccgccttctcctacaacgtcgccatccgcttcttcgcttcctcccgtccccacacct 140621

                                                                          
Query: 355    ccctccagctctccctccgcatgctccgcgccgcgctccgcccggacgcctacacgctcc 414
              | ||||  |||| ||||   ||||||||| |||  |||||||| ||| |||||||||| |
Sbjct: 140622 cgctccgcctcttcctcgaaatgctccgctccgacctccgcccagactcctacacgcttc 140681

                                                
Query: 415    cgttcctcctcctcgctgccgcccgatgccccgc 448
              | |||||||||||||| |||||||||||||||||
Sbjct: 140682 ctttcctcctcctcgccgccgcccgatgccccgc 140715



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                               
Query: 125    atgccactccctctccaccatacagcagctgcacgcccacctcctccac 173
              ||||| ||||||| || ||||  |||| || ||||||||||||||||||
Sbjct: 140368 atgccgctccctcgccgccatcaagcaactccacgcccacctcctccac 140416
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                         
Query: 161      ccacctcctccaccacgaccgcccc 185
                |||||||||||||||||||||||||
Sbjct: 15550695 ccacctcctccaccacgaccgcccc 15550671



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 161      ccacctcctccaccacgaccgcccc 185
                ||||||||||||||| |||||||||
Sbjct: 15683288 ccacctcctccaccatgaccgcccc 15683312



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 418      tcctcctcctcgctgccgcc 437
                ||||||||||||||||||||
Sbjct: 17422540 tcctcctcctcgctgccgcc 17422559



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 87       ccgcccttctcctccgccgtctcc 110
                ||||||| ||||||||||||||||
Sbjct: 13855930 ccgccctcctcctccgccgtctcc 13855953
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                         
Query: 161      ccacctcctccaccacgaccgcccc 185
                |||||||||||||||||||||||||
Sbjct: 15505960 ccacctcctccaccacgaccgcccc 15505936



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 161      ccacctcctccaccacgaccgcccc 185
                ||||||||||||||| |||||||||
Sbjct: 15636521 ccacctcctccaccatgaccgcccc 15636545



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 418      tcctcctcctcgctgccgcc 437
                ||||||||||||||||||||
Sbjct: 17376911 tcctcctcctcgctgccgcc 17376930



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 87       ccgcccttctcctccgccgtctcc 110
                ||||||| ||||||||||||||||
Sbjct: 13810210 ccgccctcctcctccgccgtctcc 13810233
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>emb|BX276100.4|CNS09S4X Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBa0076H14
             of library OSJNBa from chromosome 12 of cultivar
             Nipponbare of ssp. japonica of Oryza sativa (rice),
             complete sequence
          Length = 53315

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                      
Query: 161   ccacctcctccaccacgaccgcccc 185
             |||||||||||||||||||||||||
Sbjct: 45515 ccacctcctccaccacgaccgcccc 45491
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>gb|BC035920.1| Homo sapiens mitogen-activated protein kinase 8 interacting protein
           1, mRNA (cDNA clone IMAGE:5164046), containing
           frame-shift errors
          Length = 1079

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 378 ctccgcgccgcgctccgcccgga 400
           |||||||||||||||||||||||
Sbjct: 72  ctccgcgccgcgctccgcccgga 94
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>gb|BC068470.1| Homo sapiens mitogen-activated protein kinase 8 interacting protein
           1, mRNA (cDNA clone MGC:87090 IMAGE:5260971), complete
           cds
          Length = 3062

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 378 ctccgcgccgcgctccgcccgga 400
           |||||||||||||||||||||||
Sbjct: 127 ctccgcgccgcgctccgcccgga 149
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>gb|AC068385.9| Homo sapiens chromosome 11, clone RP11-618K13, complete sequence
          Length = 171115

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 378   ctccgcgccgcgctccgcccgga 400
             |||||||||||||||||||||||
Sbjct: 59721 ctccgcgccgcgctccgcccgga 59743
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>ref|NM_005456.2| Homo sapiens mitogen-activated protein kinase 8 interacting protein
           1 (MAPK8IP1), mRNA
          Length = 3079

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 378 ctccgcgccgcgctccgcccgga 400
           |||||||||||||||||||||||
Sbjct: 127 ctccgcgccgcgctccgcccgga 149
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>emb|AJ304445.1|HSA304445 Homo sapiens mitogen-activated protein kinase 8 interacting protein
           1 promoter region
          Length = 731

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 378 ctccgcgccgcgctccgcccgga 400
           |||||||||||||||||||||||
Sbjct: 706 ctccgcgccgcgctccgcccgga 728
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>ref|XM_471574.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1353

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 393 cgcccggacgcctacacgctcccgttcctc 422
           |||||||||| ||||||||||||| |||||
Sbjct: 19  cgcccggacggctacacgctcccgctcctc 48
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 371     ccgcatgctccgcgccgcgctc 392
               ||||||||||||||||||||||
Sbjct: 2251326 ccgcatgctccgcgccgcgctc 2251305
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 371    ccgcatgctccgcgccgcgctc 392
              ||||||||||||||||||||||
Sbjct: 412668 ccgcatgctccgcgccgcgctc 412647
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>emb|AL662995.2|OSJN00202 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0032D24,
              complete sequence
          Length = 132465

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 393    cgcccggacgcctacacgctcccgttcctc 422
              |||||||||| ||||||||||||| |||||
Sbjct: 118653 cgcccggacggctacacgctcccgctcctc 118682
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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 371     ccgcatgctccgcgccgcgctc 392
               ||||||||||||||||||||||
Sbjct: 1575580 ccgcatgctccgcgccgcgctc 1575601
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                              
Query: 393      cgcccggacgcctacacgctcccgttcctc 422
                |||||||||| ||||||||||||| |||||
Sbjct: 12444625 cgcccggacggctacacgctcccgctcctc 12444654



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 352      ccaccctccagctctccctc 371
                ||||||||||||||||||||
Sbjct: 32718672 ccaccctccagctctccctc 32718691



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 280     ccgcgcaccctacccccacg 299
               ||||||||||||||||||||
Sbjct: 5491272 ccgcgcaccctacccccacg 5491253
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>gb|AY943952.1| Streptomyces sp. F11 plasmid pFP11, complete sequence
          Length = 35159

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 83   cgtgccgcccttctcctccgccgtct 108
            |||| |||||||||||||||||||||
Sbjct: 9187 cgtgacgcccttctcctccgccgtct 9212
to top
>gb|AC153363.4| Mus musculus BAC clone RP23-5I6 from chromosome 9, complete sequence
          Length = 185444

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 11    ctgaacagaacgttttcctgc 31
             |||||||||||||||||||||
Sbjct: 28320 ctgaacagaacgttttcctgc 28300
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 161      ccacctcctccaccacgaccgcccc 185
                ||||||||||||||| |||||||||
Sbjct: 22526826 ccacctcctccaccatgaccgcccc 22526802



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 161      ccacctcctccaccacgaccgccc 184
                |||||||||||||||| |||||||
Sbjct: 23900794 ccacctcctccaccaccaccgccc 23900817
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 379     tccgcgccgcgctccgcccggacgc 403
               |||||||||||||||||| ||||||
Sbjct: 3603785 tccgcgccgcgctccgccaggacgc 3603761
to top
>dbj|AP005800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0016D04
          Length = 147313

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 161   ccacctcctccaccacgaccgcccc 185
             ||||||||||||||| |||||||||
Sbjct: 97182 ccacctcctccaccatgaccgcccc 97158
to top
>emb|AL954854.3|CNS08CD8 Oryza sativa chromosome 12, . BAC OSJNBa0080D17 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 159718

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 161    ccacctcctccaccacgaccgcccc 185
              ||||||||||||||| |||||||||
Sbjct: 142367 ccacctcctccaccatgaccgcccc 142343
to top
>gb|AC122542.3| Mus musculus BAC clone RP24-572J16 from 9, complete sequence
          Length = 175952

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 11    ctgaacagaacgttttcctgc 31
             |||||||||||||||||||||
Sbjct: 50395 ctgaacagaacgttttcctgc 50415
to top
>ref|NM_102090.2| Arabidopsis thaliana 3-deoxy-7-phosphoheptulonate synthase
           AT1G22410 mRNA, complete cds
          Length = 1911

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 92  cttctcctccgccgtctcca 111
           ||||||||||||||||||||
Sbjct: 138 cttctcctccgccgtctcca 157
to top
>ref|XM_474072.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 810

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 352 ccaccctccagctctccctc 371
           ||||||||||||||||||||
Sbjct: 89  ccaccctccagctctccctc 108
to top
>ref|XM_466652.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1856

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 161 ccacctcctccaccacgaccgccc 184
           |||||||||||||||| |||||||
Sbjct: 303 ccacctcctccaccaccaccgccc 280
to top
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 65   ctcaccggcgatgcccggcg 84
            ||||||||||||||||||||
Sbjct: 5670 ctcaccggcgatgcccggcg 5651
to top
>gb|BC056612.1| Mus musculus transmembrane protein 24, mRNA (cDNA clone MGC:65445
            IMAGE:4952570), complete cds
          Length = 2943

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 155  gcacgcccacctcctccacc 174
            ||||||||||||||||||||
Sbjct: 1212 gcacgcccacctcctccacc 1231
to top
>gb|BC049875.1| Mus musculus transmembrane protein 24, mRNA (cDNA clone
           IMAGE:5357930), partial cds
          Length = 2297

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 155 gcacgcccacctcctccacc 174
           ||||||||||||||||||||
Sbjct: 568 gcacgcccacctcctccacc 587
to top
>gb|BC035271.1| Mus musculus transmembrane protein 24, mRNA (cDNA clone
           IMAGE:5360163), partial cds
          Length = 3389

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 155 gcacgcccacctcctccacc 174
           ||||||||||||||||||||
Sbjct: 881 gcacgcccacctcctccacc 900
to top
>gb|AC122428.4| Mus musculus BAC clone RP24-175C20 from chromosome 9, complete sequence
          Length = 185902

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 155    gcacgcccacctcctccacc 174
              ||||||||||||||||||||
Sbjct: 169755 gcacgcccacctcctccacc 169774
to top
>gb|BC050398.2| Homo sapiens PRP40 pre-mRNA processing factor 40 homolog B (S.
            cerevisiae), mRNA (cDNA clone IMAGE:6046382), partial cds
          Length = 2444

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 409  cgctcccgttcctcctcctc 428
            ||||||||||||||||||||
Sbjct: 1521 cgctcccgttcctcctcctc 1502
to top
>gb|BC031917.1| Homo sapiens PRP40 pre-mRNA processing factor 40 homolog B (S.
            cerevisiae), mRNA (cDNA clone IMAGE:4999464)
          Length = 2942

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 409  cgctcccgttcctcctcctc 428
            ||||||||||||||||||||
Sbjct: 1281 cgctcccgttcctcctcctc 1262
to top
>gb|BC067364.1| Homo sapiens PRP40 pre-mRNA processing factor 40 homolog B (S.
            cerevisiae), transcript variant 1, mRNA (cDNA clone
            MGC:71266 IMAGE:6644672), complete cds
          Length = 3172

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 409  cgctcccgttcctcctcctc 428
            ||||||||||||||||||||
Sbjct: 1506 cgctcccgttcctcctcctc 1487
to top
>ref|NM_001031698.1| Homo sapiens PRP40 pre-mRNA processing factor 40 homolog B (S.
            cerevisiae) (PRPF40B), transcript variant 1, mRNA
          Length = 3172

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 409  cgctcccgttcctcctcctc 428
            ||||||||||||||||||||
Sbjct: 1506 cgctcccgttcctcctcctc 1487
to top
>ref|NM_012272.1| Homo sapiens PRP40 pre-mRNA processing factor 40 homolog B (S.
            cerevisiae) (PRPF40B), transcript variant 2, mRNA
          Length = 3698

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 409  cgctcccgttcctcctcctc 428
            ||||||||||||||||||||
Sbjct: 1975 cgctcccgttcctcctcctc 1956
to top
>emb|BX014092.1|CNS08J1C Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA21AF04 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 766

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 164 cctcctccaccacgaccgcc 183
           ||||||||||||||||||||
Sbjct: 247 cctcctccaccacgaccgcc 266
to top
>emb|BX014091.1|CNS08J1B Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA21AF04 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 878

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 164 cctcctccaccacgaccgcc 183
           ||||||||||||||||||||
Sbjct: 565 cctcctccaccacgaccgcc 546
to top
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 376     tgctccgcgccgcgctccgc 395
               ||||||||||||||||||||
Sbjct: 4261100 tgctccgcgccgcgctccgc 4261119
to top
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 370     tccgcatgctccgcgccgcg 389
               ||||||||||||||||||||
Sbjct: 1879198 tccgcatgctccgcgccgcg 1879179
to top
>emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete genome; segment 24/29
          Length = 290850

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 375    atgctccgcgccgcgctccgcccggacg 402
              ||||||||||||||| || |||||||||
Sbjct: 233077 atgctccgcgccgcggtcggcccggacg 233104
to top
>emb|AL834216.1|HSM805637 Homo sapiens mRNA; cDNA DKFZp434O1520 (from clone DKFZp434O1520)
          Length = 3698

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 409  cgctcccgttcctcctcctc 428
            ||||||||||||||||||||
Sbjct: 1975 cgctcccgttcctcctcctc 1956
to top
>emb|AL731607.3|OSJN00250 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0063C18,
             complete sequence
          Length = 150416

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 352   ccaccctccagctctccctc 371
             ||||||||||||||||||||
Sbjct: 78107 ccaccctccagctctccctc 78126
to top
>emb|AL606455.3|OSJN00015 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0079B02,
              complete sequence
          Length = 126659

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 352    ccaccctccagctctccctc 371
              ||||||||||||||||||||
Sbjct: 113693 ccaccctccagctctccctc 113712
to top
>emb|AL137459.1|HSM802172 Homo sapiens mRNA; cDNA DKFZp434H2121 (from clone DKFZp434H2121)
          Length = 1937

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 409 cgctcccgttcctcctcctc 428
           ||||||||||||||||||||
Sbjct: 188 cgctcccgttcctcctcctc 169
to top
>dbj|AK153804.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A630099D02 product:transmembrane protein
            24, full insert sequence
          Length = 4306

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 155  gcacgcccacctcctccacc 174
            ||||||||||||||||||||
Sbjct: 1613 gcacgcccacctcctccacc 1632
to top
>ref|XM_696883.1| PREDICTED: Danio rerio hypothetical protein LOC555168 (LOC555168),
            mRNA
          Length = 4653

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 161  ccacctcctccaccacgacc 180
            ||||||||||||||||||||
Sbjct: 2391 ccacctcctccaccacgacc 2410
to top
>ref|NM_027909.2| Mus musculus transmembrane protein 24 (Tmem24), mRNA
          Length = 4334

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 155  gcacgcccacctcctccacc 174
            ||||||||||||||||||||
Sbjct: 1641 gcacgcccacctcctccacc 1660
to top
>dbj|AK039220.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched
            library, clone:A230109H15 product:hypothetical C2 domain
            (Calcium/lipid-binding domain, CaLB) structure containing
            protein, full insert sequence
          Length = 2811

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 155  gcacgcccacctcctccacc 174
            ||||||||||||||||||||
Sbjct: 1612 gcacgcccacctcctccacc 1631
to top
>gb|AC006551.6|AC006551 Arabidopsis thaliana chromosome I BAC F12K8 genomic sequence, complete
             sequence
          Length = 107200

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 92    cttctcctccgccgtctcca 111
             ||||||||||||||||||||
Sbjct: 95844 cttctcctccgccgtctcca 95825
to top
>dbj|AK004920.1| Mus musculus adult male liver cDNA, RIKEN full-length enriched
            library, clone:1300006O23 product:hypothetical C2 domain
            (Calcium/lipid-binding domain, CaLB) structure containing
            protein, full insert sequence
          Length = 3360

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 155  gcacgcccacctcctccacc 174
            ||||||||||||||||||||
Sbjct: 1646 gcacgcccacctcctccacc 1665
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 84       gtgccgcccttctcctccgc 103
                ||||||||||||||||||||
Sbjct: 12786065 gtgccgcccttctcctccgc 12786046
to top
>gb|AF304130.1|AF304130 Danio rerio transmembrane receptor Roundabout1 (robo1) mRNA, complete
            cds
          Length = 6860

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 161  ccacctcctccaccacgacc 180
            ||||||||||||||||||||
Sbjct: 4595 ccacctcctccaccacgacc 4614



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 161  ccacctcctccaccacgacc 180
            ||||||||||||||||||||
Sbjct: 4508 ccacctcctccaccacgacc 4527
to top
>gb|AC020612.40| Homo sapiens 12 BAC RP11-133N21 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 188928

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 409    cgctcccgttcctcctcctc 428
              ||||||||||||||||||||
Sbjct: 110987 cgctcccgttcctcctcctc 110968
to top
>dbj|AP004811.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0019A05
          Length = 144255

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 84    gtgccgcccttctcctccgc 103
             ||||||||||||||||||||
Sbjct: 86842 gtgccgcccttctcctccgc 86823
to top
>dbj|AP006438.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0030C08
          Length = 163423

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 161    ccacctcctccaccacgaccgccc 184
              |||||||||||||||| |||||||
Sbjct: 122460 ccacctcctccaccaccaccgccc 122483
to top
>dbj|AP004881.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0496E03
          Length = 138622

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 161   ccacctcctccaccacgaccgccc 184
             |||||||||||||||| |||||||
Sbjct: 34758 ccacctcctccaccaccaccgccc 34781
to top
>ref|XM_310474.2| Anopheles gambiae str. PEST ENSANGP00000019221
           (ENSANGG00000016732), partial mRNA
          Length = 589

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 164 cctcctccaccacgaccgcc 183
           ||||||||||||||||||||
Sbjct: 328 cctcctccaccacgaccgcc 309
to top
>dbj|AK099756.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093B21, full
           insert sequence
          Length = 1856

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 161 ccacctcctccaccacgaccgccc 184
           |||||||||||||||| |||||||
Sbjct: 303 ccacctcctccaccaccaccgccc 280
to top
>dbj|AK100467.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023092J01, full
            insert sequence
          Length = 2535

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 352  ccaccctccagctctccctc 371
            ||||||||||||||||||||
Sbjct: 1499 ccaccctccagctctccctc 1518
to top
>emb|AL442112.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0423H10, complete
             sequence
          Length = 76529

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 352   ccaccctccagctctccctc 371
             ||||||||||||||||||||
Sbjct: 50973 ccaccctccagctctccctc 50992
to top
>emb|AL662934.3|OSJN00136 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027O01,
             complete sequence
          Length = 150283

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 280   ccgcgcaccctacccccacg 299
             ||||||||||||||||||||
Sbjct: 45902 ccgcgcaccctacccccacg 45883
to top
>emb|BX667525.2|CNS09SC3 Oryza sativa chromosome 12, . Partial sequence from PAC P0185F07 of
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 50021

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 87    ccgcccttctcctccgccgtctcc 110
             ||||||| ||||||||||||||||
Sbjct: 24733 ccgccctcctcctccgccgtctcc 24756
to top
>emb|AL731763.1|CNS07YQA Oryza sativa chromosome 12, . BAC OSJNBa0090O14 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 129619

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 418    tcctcctcctcgctgccgcc 437
              ||||||||||||||||||||
Sbjct: 109866 tcctcctcctcgctgccgcc 109847
to top
>gb|AC124577.5| Mus musculus BAC clone RP23-162P10 from 9, complete sequence
          Length = 218248

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 155    gcacgcccacctcctccacc 174
              ||||||||||||||||||||
Sbjct: 205367 gcacgcccacctcctccacc 205348
to top
>gb|BC060156.1| Mus musculus transmembrane protein 24, mRNA (cDNA clone MGC:64682
            IMAGE:6810220), complete cds
          Length = 3237

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 155  gcacgcccacctcctccacc 174
            ||||||||||||||||||||
Sbjct: 1505 gcacgcccacctcctccacc 1524
to top
>ref|NM_131481.1| Danio rerio roundabout homolog 1 (robo1), mRNA
          Length = 6860

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 161  ccacctcctccaccacgacc 180
            ||||||||||||||||||||
Sbjct: 4595 ccacctcctccaccacgacc 4614



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 161  ccacctcctccaccacgacc 180
            ||||||||||||||||||||
Sbjct: 4508 ccacctcctccaccacgacc 4527


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,853,301
Number of Sequences: 3902068
Number of extensions: 3853301
Number of successful extensions: 80341
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79232
Number of HSP's gapped (non-prelim): 1106
length of query: 453
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 431
effective length of database: 17,147,199,772
effective search space: 7390443101732
effective search space used: 7390443101732
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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