Clone Name | bastl02e08 |
---|---|
Clone Library Name | barley_pub |
>gb|AY736121.1| Triticum aestivum ubiquitin-conjugating enzyme mRNA, complete cds Length = 460 Score = 517 bits (261), Expect = e-144 Identities = 288/297 (96%) Strand = Plus / Plus Query: 135 gtttgatcccatggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccc 194 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1 gtttgatcccatggcgtccaagaggatcctcaaggagctcaaggacctgcagaaggaccc 60 Query: 195 tcccacctcatgcagcgcaggtcctgtaggtgaggacatgttccactggcaggccactat 254 ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 61 tcccacctcgtgcagcgcaggtcctgtaggtgaggacatgttccactggcaggcaactat 120 Query: 255 catggggccctcggagagcccgttcaccggtggtctatttttggtcaacattcatttccc 314 |||||| ||||| || || |||||||||||||||||||||||||| |||||||||||||| Sbjct: 121 catgggaccctctgacagtccgttcaccggtggtctatttttggtgaacattcatttccc 180 Query: 315 accggattaccccttcaagcccccgaaggtctctttccgcaccaaggtgttccacccgaa 374 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 181 accggattaccccttcaagcccccgaaggtctctttccgcaccaaggtgttccacccaaa 240 Query: 375 catcaacagcaacggcagcatttgccttgacattctcaaggaacagtggagcccggc 431 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 catcaacagcaacggcagcatttgccttgacattctcaaggaacagtggagcccggc 297
>gb|BT016295.1| Zea mays clone Contig128 mRNA sequence Length = 788 Score = 351 bits (177), Expect = 1e-93 Identities = 268/297 (90%), Gaps = 1/297 (0%) Strand = Plus / Plus Query: 132 cgggtttgatcccatggcgtccaagaggatcctcaaggagctgaaggacctgcagaagga 191 ||||||||||| |||||||| ||||||||||| |||||| ||||||||||||||||||| Sbjct: 114 cgggtttgatcg-atggcgtcgaagaggatcctgaaggagttgaaggacctgcagaagga 172 Query: 192 ccctcccacctcatgcagcgcaggtcctgtaggtgaggacatgttccactggcaggccac 251 ||| |||||||| ||||||||||||||||| ||||||||||||||||| ||||| || || Sbjct: 173 cccgcccacctcctgcagcgcaggtcctgttggtgaggacatgttccattggcaagcgac 232 Query: 252 tatcatggggccctcggagagcccgttcaccggtggtctatttttggtcaacattcattt 311 ||||||||||| ||||| ||||| || | ||||| |||| ||||| |||||||| || Sbjct: 233 catcatggggccttcggacagcccatttgcaggtggggtattcttggtgaacattcactt 292 Query: 312 cccaccggattaccccttcaagcccccgaaggtctctttccgcaccaaggtgttccaccc 371 ||||||||||||||| |||||||| || ||||| ||||||||||||||||| |||||||| Sbjct: 293 cccaccggattaccctttcaagccaccaaaggtgtctttccgcaccaaggttttccaccc 352 Query: 372 gaacatcaacagcaacggcagcatttgccttgacattctcaaggaacagtggagccc 428 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 353 gaacatcaacagcaacggcagcatttgccttgacattcttaaggaacagtggagccc 409
>gb|AY109692.1| Zea mays CL301_1 mRNA sequence Length = 912 Score = 337 bits (170), Expect = 2e-89 Identities = 264/294 (89%), Gaps = 1/294 (0%) Strand = Plus / Plus Query: 132 cgggtttgatcccatggcgtccaagaggatcctcaaggagctgaaggacctgcagaagga 191 ||||||||||| |||||||| ||||||||||| |||||| ||||||||||||||||||| Sbjct: 113 cgggtttgatcg-atggcgtcgaagaggatcctgaaggagttgaaggacctgcagaagga 171 Query: 192 ccctcccacctcatgcagcgcaggtcctgtaggtgaggacatgttccactggcaggccac 251 ||| |||||||| ||||||||||||||||| ||||||| ||||||||| ||||| || || Sbjct: 172 cccgcccacctcctgcagcgcaggtcctgttggtgaggccatgttccattggcaagcgac 231 Query: 252 tatcatggggccctcggagagcccgttcaccggtggtctatttttggtcaacattcattt 311 ||||||||||| ||||| ||||| || | ||||| |||| ||||| |||||||| || Sbjct: 232 catcatggggccttcggacagcccatttgcaggtggggtattcttggtgaacattcactt 291 Query: 312 cccaccggattaccccttcaagcccccgaaggtctctttccgcaccaaggtgttccaccc 371 ||||||||||||||| |||||||| || ||||| ||||||||||||||||| |||||||| Sbjct: 292 cccaccggattaccctttcaagccaccaaaggtgtctttccgcaccaaggttttccaccc 351 Query: 372 gaacatcaacagcaacggcagcatttgccttgacattctcaaggaacagtggag 425 ||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 352 gaacatcaacagcaacggcagcatttgccttgacattcttaaggaacagtggag 405
>gb|AY083611.1| Oryza sativa elicitor and UV light related transcription factor (Elr) mRNA, complete cds Length = 576 Score = 335 bits (169), Expect = 7e-89 Identities = 269/301 (89%), Gaps = 1/301 (0%) Strand = Plus / Plus Query: 125 cgccggccgggtttgatcccatggcgtccaagaggatcctcaaggagctgaaggacctgc 184 |||||| ||||||||||| |||||||||||||||||||| |||||| |||||||||||| Sbjct: 105 cgccggtcgggtttgatcg-atggcgtccaagaggatcctgaaggagttgaaggacctgc 163 Query: 185 agaaggaccctcccacctcatgcagcgcaggtcctgtaggtgaggacatgttccactggc 244 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 164 agaaggaccctcccacctcatgcagcgcaggtcctgtgggtgaggacatgttccattggc 223 Query: 245 aggccactatcatggggccctcggagagcccgttcaccggtggtctatttttggtcaaca 304 | || ||||| ||||| ||||| || ||||| || | ||||| |||| ||||| |||| Sbjct: 224 aagctactattatgggaccctcagacagcccatttgctggtggggtattcttggtgaaca 283 Query: 305 ttcatttcccaccggattaccccttcaagcccccgaaggtctctttccgcaccaaggtgt 364 ||||||||||||||||||| || || || || |||||||||||||||||||||||||| | Sbjct: 284 ttcatttcccaccggattatccttttaaaccaccgaaggtctctttccgcaccaaggttt 343 Query: 365 tccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaacagtgga 424 ||||||||||||| || ||||| |||||||||||||| ||||| |||||||||||||||| Sbjct: 344 tccacccgaacattaatagcaatggcagcatttgcctcgacatcctcaaggaacagtgga 403 Query: 425 g 425 | Sbjct: 404 g 404
>dbj|AK119682.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-A01, full insert sequence Length = 832 Score = 335 bits (169), Expect = 7e-89 Identities = 269/301 (89%), Gaps = 1/301 (0%) Strand = Plus / Plus Query: 125 cgccggccgggtttgatcccatggcgtccaagaggatcctcaaggagctgaaggacctgc 184 |||||| ||||||||||| |||||||||||||||||||| |||||| |||||||||||| Sbjct: 137 cgccggtcgggtttgatcg-atggcgtccaagaggatcctgaaggagttgaaggacctgc 195 Query: 185 agaaggaccctcccacctcatgcagcgcaggtcctgtaggtgaggacatgttccactggc 244 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 196 agaaggaccctcccacctcatgcagcgcaggtcctgtgggtgaggacatgttccattggc 255 Query: 245 aggccactatcatggggccctcggagagcccgttcaccggtggtctatttttggtcaaca 304 | || ||||| ||||| ||||| || ||||| || | ||||| |||| ||||| |||| Sbjct: 256 aagctactattatgggaccctcagacagcccatttgctggtggggtattcttggtgaaca 315 Query: 305 ttcatttcccaccggattaccccttcaagcccccgaaggtctctttccgcaccaaggtgt 364 ||||||||||||||||||| || || || || |||||||||||||||||||||||||| | Sbjct: 316 ttcatttcccaccggattatccttttaaaccaccgaaggtctctttccgcaccaaggttt 375 Query: 365 tccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaacagtgga 424 ||||||||||||| || ||||| |||||||||||||| ||||| |||||||||||||||| Sbjct: 376 tccacccgaacattaatagcaatggcagcatttgcctcgacatcctcaaggaacagtgga 435 Query: 425 g 425 | Sbjct: 436 g 436
>ref|XM_474269.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 447 Score = 327 bits (165), Expect = 2e-86 Identities = 252/281 (89%) Strand = Plus / Plus Query: 145 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 204 |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 1 atggcgtccaagaggatcctgaaggagttgaaggacctgcagaaggaccctcccacctca 60 Query: 205 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggccactatcatggggccc 264 ||||||||||||||||| ||||||||||||||||| ||||| || ||||| ||||| ||| Sbjct: 61 tgcagcgcaggtcctgtgggtgaggacatgttccattggcaagctactattatgggaccc 120 Query: 265 tcggagagcccgttcaccggtggtctatttttggtcaacattcatttcccaccggattac 324 || || ||||| || | ||||| |||| ||||| ||||||||||||||||||||||| Sbjct: 121 tcagacagcccatttgctggtggggtattcttggtgaacattcatttcccaccggattat 180 Query: 325 cccttcaagcccccgaaggtctctttccgcaccaaggtgttccacccgaacatcaacagc 384 || || || || |||||||||||||||||||||||||| |||||||||||||| || ||| Sbjct: 181 ccttttaaaccaccgaaggtctctttccgcaccaaggttttccacccgaacattaatagc 240 Query: 385 aacggcagcatttgccttgacattctcaaggaacagtggag 425 || |||||||||||||| ||||| ||||||||||||||||| Sbjct: 241 aatggcagcatttgcctcgacatcctcaaggaacagtggag 281
>gb|AF034946.1|AF034946 Zea mays ubiquitin conjugating enzyme (UBC) mRNA, complete cds Length = 781 Score = 176 bits (89), Expect = 4e-41 Identities = 236/285 (82%) Strand = Plus / Plus Query: 144 catggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctc 203 ||||||||| ||| | ||||||||||||||||||||||||||||||||||| ||||| || Sbjct: 40 catggcgtctaagcgcatcctcaaggagctgaaggacctgcagaaggacccccccacatc 99 Query: 204 atgcagcgcaggtcctgtaggtgaggacatgttccactggcaggccactatcatggggcc 263 |||||| |||||||||| |||||||||||||| || ||||| || || || ||||| || Sbjct: 100 atgcagtgcaggtcctgctggtgaggacatgtttcattggcaagcaacaattatgggacc 159 Query: 264 ctcggagagcccgttcaccggtggtctatttttggtcaacattcatttcccaccggatta 323 | || || || | | |||||| | ||||| || |||||||||||||| || ||||| Sbjct: 160 acctgacagtccctatgctggtggtgtttttttagtgaacattcatttcccgccagatta 219 Query: 324 ccccttcaagcccccgaaggtctctttccgcaccaaggtgttccacccgaacatcaacag 383 ||||||||| || || ||||| |||||| || ||||| ||||| || || |||||||| Sbjct: 220 ccccttcaaacctccaaaggtttctttcaagacaaaggtcttccatcctaatatcaacag 279 Query: 384 caacggcagcatttgccttgacattctcaaggaacagtggagccc 428 ||| || || || ||||||||||||||||| || ||||||||||| Sbjct: 280 caatggaagtatatgccttgacattctcaaagagcagtggagccc 324
>dbj|D50574.1| Oryza sativa mRNA, similar to ubiquitin conjugating enzyme Length = 295 Score = 170 bits (86), Expect = 2e-39 Identities = 124/136 (91%), Gaps = 1/136 (0%) Strand = Plus / Plus Query: 125 cgccggccgggtttgatcccatggcgtccaagaggatcctcaaggagctgaaggacctgc 184 |||||| ||||||||||| |||||||||||||||||||| |||||| |||||||||||| Sbjct: 125 cgccggtcgggtttgatcg-atggcgtccaagaggatcctgaaggagttgaaggacctgc 183 Query: 185 agaaggaccctcccacctcatgcagcgcaggtcctgtaggtgaggacatgttccactggc 244 ||||||||| |||||| |||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 184 agaaggaccntcccacntcatgcagcgcaggtcctgtgggtgaggacatgttccattggc 243 Query: 245 aggccactatcatggg 260 | || ||||| ||||| Sbjct: 244 aagctactattatggg 259
>gb|BT016331.1| Zea mays clone Contig164 mRNA sequence Length = 860 Score = 168 bits (85), Expect = 9e-39 Identities = 235/285 (82%) Strand = Plus / Plus Query: 144 catggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctc 203 ||||||||| ||| | ||||||||||||||||||||||||||||||||||| ||||| || Sbjct: 100 catggcgtctaagcgcatcctcaaggagctgaaggacctgcagaaggacccccccacatc 159 Query: 204 atgcagcgcaggtcctgtaggtgaggacatgttccactggcaggccactatcatggggcc 263 |||||| |||||| ||| |||||||||||||| || ||||| || || || ||||| || Sbjct: 160 atgcagtgcaggtgctgctggtgaggacatgtttcattggcaagcaacaattatgggacc 219 Query: 264 ctcggagagcccgttcaccggtggtctatttttggtcaacattcatttcccaccggatta 323 | || || || | | |||||| | ||||| || |||||||||||||| || ||||| Sbjct: 220 acctgacagtccctatgctggtggtgtttttttagtgaacattcatttcccgccagatta 279 Query: 324 ccccttcaagcccccgaaggtctctttccgcaccaaggtgttccacccgaacatcaacag 383 ||||||||| || || ||||| |||||| || ||||| ||||| || || |||||||| Sbjct: 280 ccccttcaaacctccaaaggtttctttcaagacaaaggtcttccatcctaatatcaacag 339 Query: 384 caacggcagcatttgccttgacattctcaaggaacagtggagccc 428 ||| || || || ||||||||||||||||| || ||||||||||| Sbjct: 340 caatggaagtatatgccttgacattctcaaagagcagtggagccc 384
>gb|AY106353.1| Zea mays PCO068301 mRNA sequence Length = 727 Score = 163 bits (82), Expect = 6e-37 Identities = 217/262 (82%) Strand = Plus / Plus Query: 143 ccatggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacct 202 |||||||||| ||| |||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 140 ccatggcgtcgaagcggatcctcaaggagctcaaggacctgcagaaggatcctcccacct 199 Query: 203 catgcagcgcaggtcctgtaggtgaggacatgttccactggcaggccactatcatggggc 262 | ||||||||||| ||||| | || || |||||| |||||||||| || || ||||||| Sbjct: 200 cttgcagcgcaggccctgttgccgaagatatgttctactggcaggcgacgattatggggc 259 Query: 263 cctcggagagcccgttcaccggtggtctatttttggtcaacattcatttcccaccggatt 322 | || || ||||| | | | ||||| |||||||||||| ||||| || |||||||| | Sbjct: 260 catcagatagcccatacgctggtggcgtatttttggtcactattcactttccaccggact 319 Query: 323 accccttcaagcccccgaaggtctctttccgcaccaaggtgttccacccgaacatcaaca 382 |||| ||||| || |||||||| | ||| || ||||| | ||||||||| ||||||| Sbjct: 320 acccattcaaaccaccgaaggttgcattcaagacgaaggtttaccacccgaatatcaaca 379 Query: 383 gcaacggcagcatttgccttga 404 ||||||| ||||| || ||||| Sbjct: 380 gcaacgggagcatctgtcttga 401
>gb|BT017507.1| Zea mays clone EL01N0417C02.c mRNA sequence Length = 727 Score = 155 bits (78), Expect = 1e-34 Identities = 216/262 (82%) Strand = Plus / Plus Query: 143 ccatggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacct 202 |||||||||| ||| |||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 102 ccatggcgtcgaagcggatcctcaaggagctcaaggacctgcagaaggatcctcccacct 161 Query: 203 catgcagcgcaggtcctgtaggtgaggacatgttccactggcaggccactatcatggggc 262 | ||||||||||| ||||| | || || |||||| |||||||||| || || ||||||| Sbjct: 162 cttgcagcgcagggcctgttgccgaagatatgttctactggcaggcgacgattatggggc 221 Query: 263 cctcggagagcccgttcaccggtggtctatttttggtcaacattcatttcccaccggatt 322 | || || ||||| | | | ||||| |||||||||||| ||||| || |||||||| | Sbjct: 222 catcagatagcccatacgctggtggcgtatttttggtcactattcactttccaccggact 281 Query: 323 accccttcaagcccccgaaggtctctttccgcaccaaggtgttccacccgaacatcaaca 382 |||| ||||| || |||||||| | ||| || ||||| | ||| ||||| ||||||| Sbjct: 282 acccattcaaaccaccgaaggttgcattcaagacgaaggtttaccatccgaatatcaaca 341 Query: 383 gcaacggcagcatttgccttga 404 ||||||| ||||| || ||||| Sbjct: 342 gcaacgggagcatctgtcttga 363
>gb|AY952317.1| Triticum aestivum cultivar 7269-10 immature spike ubiquitin-conjugating enzyme 2 mRNA, complete cds Length = 853 Score = 153 bits (77), Expect = 6e-34 Identities = 221/269 (82%) Strand = Plus / Plus Query: 160 atcctcaaggagctgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcct 219 ||||||||||| || |||||||||||||||||||| ||||| |||||||| ||||||||| Sbjct: 156 atcctcaaggaactcaaggacctgcagaaggacccgcccacatcatgcagtgcaggtcct 215 Query: 220 gtaggtgaggacatgttccactggcaggccactatcatggggccctcggagagcccgttc 279 | |||||||||||||| || ||||| || || || ||||| ||| | || | || | Sbjct: 216 gctggtgaggacatgtttcattggcaagcaacaattatgggaccccctgacggtccctat 275 Query: 280 accggtggtctatttttggtcaacattcatttcccaccggattaccccttcaagcccccg 339 |||| ||| | || || || |||||||||||||| |||||||||||||||||||| || Sbjct: 276 gccggcggtgttttcttagtgaacattcatttccctccggattaccccttcaagccacca 335 Query: 340 aaggtctctttccgcaccaaggtgttccacccgaacatcaacagcaacggcagcatttgc 399 ||||| ||||| || ||||| ||||| || || ||||||||||| || ||||| ||| Sbjct: 336 aaggtatcttttaagacaaaggtcttccatcctaatatcaacagcaatggaagcatatgc 395 Query: 400 cttgacattctcaaggaacagtggagccc 428 ||||| ||||| ||||| ||||||||||| Sbjct: 396 cttgatattcttaaggagcagtggagccc 424
>ref|NM_191104.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 447 Score = 151 bits (76), Expect = 2e-33 Identities = 232/284 (81%) Strand = Plus / Plus Query: 145 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 204 |||||||| ||| ||||||||||||| || |||||||||||||| || ||||| || ||| Sbjct: 1 atggcgtcgaagcggatcctcaaggaactaaaggacctgcagaaagatcctccaacatca 60 Query: 205 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggccactatcatggggccc 264 ||||| |||||||||| |||||||| |||||||| |||||||| || || ||||| || Sbjct: 61 tgcagtgcaggtcctgctggtgaggatatgttccattggcaggcaaccattatgggccct 120 Query: 265 tcggagagcccgttcaccggtggtctatttttggtcaacattcatttcccaccggattac 324 | || || || | | |||||| | || ||||| || ||||||||||| ||||| ||| Sbjct: 121 ccagatagtccctatgctggtggtgttttcttggtgaatattcatttccccccggactac 180 Query: 325 cccttcaagcccccgaaggtctctttccgcaccaaggtgttccacccgaacatcaacagc 384 |||||||| || || ||||| ||||| || ||||| ||||| || |||||||| ||| Sbjct: 181 cccttcaaacctccaaaggtgtcttttaagacaaaggtcttccatccaaacatcaatagc 240 Query: 385 aacggcagcatttgccttgacattctcaaggaacagtggagccc 428 || || ||||| ||||| |||||||| ||||||||||||||||| Sbjct: 241 aatggaagcatatgcctcgacattcttaaggaacagtggagccc 284
>emb|AL606619.3|OSJN00032 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043A12, complete sequence Length = 190432 Score = 127 bits (64), Expect = 3e-26 Identities = 70/72 (97%) Strand = Plus / Minus Query: 145 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 204 |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 35454 atggcgtccaagaggatcctgaaggagttgaaggacctgcagaaggaccctcccacctca 35395 Query: 205 tgcagcgcaggt 216 |||||||||||| Sbjct: 35394 tgcagcgcaggt 35383 Score = 121 bits (61), Expect = 2e-24 Identities = 79/85 (92%) Strand = Plus / Minus Query: 341 aggtctctttccgcaccaaggtgttccacccgaacatcaacagcaacggcagcatttgcc 400 |||||||||||||||||||||| |||||||||||||| || ||||| ||||||||||||| Sbjct: 33918 aggtctctttccgcaccaaggttttccacccgaacattaatagcaatggcagcatttgcc 33859 Query: 401 ttgacattctcaaggaacagtggag 425 | ||||| ||||||||||||||||| Sbjct: 33858 tcgacatcctcaaggaacagtggag 33834 Score = 97.6 bits (49), Expect = 3e-17 Identities = 112/133 (84%) Strand = Plus / Minus Query: 212 caggtcctgtaggtgaggacatgttccactggcaggccactatcatggggccctcggaga 271 |||||||||| ||||||||||||||||| ||||| || ||||| ||||| ||||| || | Sbjct: 34390 caggtcctgtgggtgaggacatgttccattggcaagctactattatgggaccctcagaca 34331 Query: 272 gcccgttcaccggtggtctatttttggtcaacattcatttcccaccggattaccccttca 331 |||| || | ||||| |||| ||||| ||||||||||||||||||||||| || || | Sbjct: 34330 gcccatttgctggtggggtattcttggtgaacattcatttcccaccggattatcctttta 34271 Query: 332 agcccccgaaggt 344 | || |||||||| Sbjct: 34270 aaccaccgaaggt 34258
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 127 bits (64), Expect = 3e-26 Identities = 70/72 (97%) Strand = Plus / Minus Query: 145 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 204 |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 34124072 atggcgtccaagaggatcctgaaggagttgaaggacctgcagaaggaccctcccacctca 34124013 Query: 205 tgcagcgcaggt 216 |||||||||||| Sbjct: 34124012 tgcagcgcaggt 34124001 Score = 121 bits (61), Expect = 2e-24 Identities = 79/85 (92%) Strand = Plus / Minus Query: 341 aggtctctttccgcaccaaggtgttccacccgaacatcaacagcaacggcagcatttgcc 400 |||||||||||||||||||||| |||||||||||||| || ||||| ||||||||||||| Sbjct: 34122536 aggtctctttccgcaccaaggttttccacccgaacattaatagcaatggcagcatttgcc 34122477 Query: 401 ttgacattctcaaggaacagtggag 425 | ||||| ||||||||||||||||| Sbjct: 34122476 tcgacatcctcaaggaacagtggag 34122452 Score = 97.6 bits (49), Expect = 3e-17 Identities = 112/133 (84%) Strand = Plus / Minus Query: 212 caggtcctgtaggtgaggacatgttccactggcaggccactatcatggggccctcggaga 271 |||||||||| ||||||||||||||||| ||||| || ||||| ||||| ||||| || | Sbjct: 34123008 caggtcctgtgggtgaggacatgttccattggcaagctactattatgggaccctcagaca 34122949 Query: 272 gcccgttcaccggtggtctatttttggtcaacattcatttcccaccggattaccccttca 331 |||| || | ||||| |||| ||||| ||||||||||||||||||||||| || || | Sbjct: 34122948 gcccatttgctggtggggtattcttggtgaacattcatttcccaccggattatcctttta 34122889 Query: 332 agcccccgaaggt 344 | || |||||||| Sbjct: 34122888 aaccaccgaaggt 34122876 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 ccgccgtccgtcgccgccgc 66 |||||||||||||||||||| Sbjct: 23111632 ccgccgtccgtcgccgccgc 23111651 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 ccgccgtccgtcgccgccgc 66 |||||||||||||||||||| Sbjct: 12222082 ccgccgtccgtcgccgccgc 12222101
>emb|AL732340.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0811B10, complete sequence Length = 99356 Score = 127 bits (64), Expect = 3e-26 Identities = 70/72 (97%) Strand = Plus / Minus Query: 145 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 204 |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 41162 atggcgtccaagaggatcctgaaggagttgaaggacctgcagaaggaccctcccacctca 41103 Query: 205 tgcagcgcaggt 216 |||||||||||| Sbjct: 41102 tgcagcgcaggt 41091 Score = 121 bits (61), Expect = 2e-24 Identities = 79/85 (92%) Strand = Plus / Minus Query: 341 aggtctctttccgcaccaaggtgttccacccgaacatcaacagcaacggcagcatttgcc 400 |||||||||||||||||||||| |||||||||||||| || ||||| ||||||||||||| Sbjct: 39626 aggtctctttccgcaccaaggttttccacccgaacattaatagcaatggcagcatttgcc 39567 Query: 401 ttgacattctcaaggaacagtggag 425 | ||||| ||||||||||||||||| Sbjct: 39566 tcgacatcctcaaggaacagtggag 39542 Score = 97.6 bits (49), Expect = 3e-17 Identities = 112/133 (84%) Strand = Plus / Minus Query: 212 caggtcctgtaggtgaggacatgttccactggcaggccactatcatggggccctcggaga 271 |||||||||| ||||||||||||||||| ||||| || ||||| ||||| ||||| || | Sbjct: 40098 caggtcctgtgggtgaggacatgttccattggcaagctactattatgggaccctcagaca 40039 Query: 272 gcccgttcaccggtggtctatttttggtcaacattcatttcccaccggattaccccttca 331 |||| || | ||||| |||| ||||| ||||||||||||||||||||||| || || | Sbjct: 40038 gcccatttgctggtggggtattcttggtgaacattcatttcccaccggattatcctttta 39979 Query: 332 agcccccgaaggt 344 | || |||||||| Sbjct: 39978 aaccaccgaaggt 39966
>dbj|AK104783.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-D03, full insert sequence Length = 1071 Score = 121 bits (61), Expect = 2e-24 Identities = 79/85 (92%) Strand = Plus / Plus Query: 341 aggtctctttccgcaccaaggtgttccacccgaacatcaacagcaacggcagcatttgcc 400 |||||||||||||||||||||| |||||||||||||| || ||||| ||||||||||||| Sbjct: 510 aggtctctttccgcaccaaggttttccacccgaacattaatagcaatggcagcatttgcc 569 Query: 401 ttgacattctcaaggaacagtggag 425 | ||||| ||||||||||||||||| Sbjct: 570 tcgacatcctcaaggaacagtggag 594 Score = 97.6 bits (49), Expect = 3e-17 Identities = 112/133 (84%) Strand = Plus / Plus Query: 212 caggtcctgtaggtgaggacatgttccactggcaggccactatcatggggccctcggaga 271 |||||||||| ||||||||||||||||| ||||| || ||||| ||||| ||||| || | Sbjct: 38 caggtcctgtgggtgaggacatgttccattggcaagctactattatgggaccctcagaca 97 Query: 272 gcccgttcaccggtggtctatttttggtcaacattcatttcccaccggattaccccttca 331 |||| || | ||||| |||| ||||| ||||||||||||||||||||||| || || | Sbjct: 98 gcccatttgctggtggggtattcttggtgaacattcatttcccaccggattatcctttta 157 Query: 332 agcccccgaaggt 344 | || |||||||| Sbjct: 158 aaccaccgaaggt 170
>dbj|AK060954.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-G05, full insert sequence Length = 1071 Score = 121 bits (61), Expect = 2e-24 Identities = 79/85 (92%) Strand = Plus / Plus Query: 341 aggtctctttccgcaccaaggtgttccacccgaacatcaacagcaacggcagcatttgcc 400 |||||||||||||||||||||| |||||||||||||| || ||||| ||||||||||||| Sbjct: 510 aggtctctttccgcaccaaggttttccacccgaacattaatagcaatggcagcatttgcc 569 Query: 401 ttgacattctcaaggaacagtggag 425 | ||||| ||||||||||||||||| Sbjct: 570 tcgacatcctcaaggaacagtggag 594 Score = 97.6 bits (49), Expect = 3e-17 Identities = 112/133 (84%) Strand = Plus / Plus Query: 212 caggtcctgtaggtgaggacatgttccactggcaggccactatcatggggccctcggaga 271 |||||||||| ||||||||||||||||| ||||| || ||||| ||||| ||||| || | Sbjct: 38 caggtcctgtgggtgaggacatgttccattggcaagctactattatgggaccctcagaca 97 Query: 272 gcccgttcaccggtggtctatttttggtcaacattcatttcccaccggattaccccttca 331 |||| || | ||||| |||| ||||| ||||||||||||||||||||||| || || | Sbjct: 98 gcccatttgctggtggggtattcttggtgaacattcatttcccaccggattatcctttta 157 Query: 332 agcccccgaaggt 344 | || |||||||| Sbjct: 158 aaccaccgaaggt 170
>gb|U17250.1|BCSC1 Brassica oleracea ubiquitine conjugating enzyme mRNA, partial cds Length = 607 Score = 121 bits (61), Expect = 2e-24 Identities = 188/228 (82%), Gaps = 3/228 (1%) Strand = Plus / Plus Query: 201 ctcatgcagcgcaggtcctgtaggtgaggacatgttccactggcaggccactatcatggg 260 ||||||||| || |||||||| ||||| || |||||||||||||| || ||||||||||| Sbjct: 3 ctcatgcagtgccggtcctgtgggtgatgatatgttccactggcaagcgactatcatggg 62 Query: 261 gccctcggagagcccgttcaccggtggtctatttttggtcaacattcatttcccaccgga 320 || | || ||||| ||| |||| ||| | ||| | || |||||| |||||||| || Sbjct: 63 tccaactgatagcccattctccggaggtgtgtttcttgtttccattcacttcccaccaga 122 Query: 321 ttaccccttcaagcccccgaaggtctctttccgcaccaaggtgttccacccgaacatcaa 380 ||||||||||||||| || ||||| |||||| |||||||||| | ||||| | ||||| Sbjct: 123 ttaccccttcaagccaccaaaggtttctttc-gcaccaaggtttaccaccg--atatcaa 179 Query: 381 cagcaacggcagcatttgccttgacattctcaaggaacagtggagccc 428 |||||| |||||||| || ||||||||||| || || ||||||||||| Sbjct: 180 cagcaatggcagcatctgtcttgacattctgaaagagcagtggagccc 227
>ref|XM_464900.1| Oryza sativa (japonica cultivar-group), mRNA Length = 728 Score = 115 bits (58), Expect = 1e-22 Identities = 94/106 (88%) Strand = Plus / Plus Query: 143 ccatggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacct 202 |||||||||||||| |||||||||||||||| ||||||||||||||||| || ||||||| Sbjct: 34 ccatggcgtccaagcggatcctcaaggagctcaaggacctgcagaaggatccccccacct 93 Query: 203 catgcagcgcaggtcctgtaggtgaggacatgttccactggcaggc 248 | |||||||| || ||||| | || || ||||||||||||||||| Sbjct: 94 cctgcagcgccggccctgtggcagaagatatgttccactggcaggc 139 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 358 aaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaa 417 |||||||||||||| ||||| || |||||||| ||||| |||||||| || | ||||| Sbjct: 249 aaggtgttccacccaaacattaatagcaacggaagcatatgccttgatatcttgaaggag 308 Query: 418 cagtggag 425 |||||||| Sbjct: 309 cagtggag 316
>dbj|AK121248.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023101B08, full insert sequence Length = 729 Score = 115 bits (58), Expect = 1e-22 Identities = 94/106 (88%) Strand = Plus / Plus Query: 143 ccatggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacct 202 |||||||||||||| |||||||||||||||| ||||||||||||||||| || ||||||| Sbjct: 34 ccatggcgtccaagcggatcctcaaggagctcaaggacctgcagaaggatccccccacct 93 Query: 203 catgcagcgcaggtcctgtaggtgaggacatgttccactggcaggc 248 | |||||||| || ||||| | || || ||||||||||||||||| Sbjct: 94 cctgcagcgccggccctgtggcagaagatatgttccactggcaggc 139 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 358 aaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaa 417 |||||||||||||| ||||| || |||||||| ||||| |||||||| || | ||||| Sbjct: 249 aaggtgttccacccaaacattaatagcaacggaagcatatgccttgatatcttgaaggag 308 Query: 418 cagtggag 425 |||||||| Sbjct: 309 cagtggag 316
>gb|AY104017.1| Zea mays PCO119482 mRNA sequence Length = 885 Score = 115 bits (58), Expect = 1e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 144 catggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctc 203 ||||||||| ||| | ||||||||||||||||||||||||||||| ||||| ||||| || Sbjct: 137 catggcgtctaagcgcatcctcaaggagctgaaggacctgcagaaagacccccccacatc 196 Query: 204 atgcagcgcaggtcctgtaggtgaggacatgttccactggca 245 |||||| |||||||||| |||||||||||||| || ||||| Sbjct: 197 atgcagtgcaggtcctgctggtgaggacatgtttcattggca 238 Score = 95.6 bits (48), Expect = 1e-16 Identities = 108/128 (84%) Strand = Plus / Plus Query: 301 aacattcatttcccaccggattaccccttcaagcccccgaaggtctctttccgcaccaag 360 |||||||||||||| || |||||||||||||| || || ||||| |||||| || ||| Sbjct: 294 aacattcatttcccgccagattaccccttcaaacctccaaaggtttctttcaagacaaag 353 Query: 361 gtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaacag 420 || ||||| || || ||||||||||| || || || ||||||||||||||||| || ||| Sbjct: 354 gtcttccatcctaatatcaacagcaatggaagtatatgccttgacattctcaaagagcag 413 Query: 421 tggagccc 428 |||||||| Sbjct: 414 tggagccc 421
>dbj|AB074412.1| Oryza sativa (japonica cultivar-group) mRNA for ubiquitin-conjugating enzyme OsUBC5b, complete cds Length = 574 Score = 115 bits (58), Expect = 1e-22 Identities = 94/106 (88%) Strand = Plus / Plus Query: 143 ccatggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacct 202 |||||||||||||| |||||||||||||||| ||||||||||||||||| || ||||||| Sbjct: 30 ccatggcgtccaagcggatcctcaaggagctcaaggacctgcagaaggatccccccacct 89 Query: 203 catgcagcgcaggtcctgtaggtgaggacatgttccactggcaggc 248 | |||||||| || ||||| | || || ||||||||||||||||| Sbjct: 90 cctgcagcgccggccctgtggcagaagatatgttccactggcaggc 135 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 358 aaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaa 417 |||||||||||||| ||||| || |||||||| ||||| |||||||| || | ||||| Sbjct: 245 aaggtgttccacccaaacattaatagcaacggaagcatatgccttgatatcttgaaggag 304 Query: 418 cagtggag 425 |||||||| Sbjct: 305 cagtggag 312
>emb|X73419.1|LEUBC L.esculentum mRNA for ubiquitin conjugating enzyme E2 Length = 686 Score = 113 bits (57), Expect = 5e-22 Identities = 108/125 (86%) Strand = Plus / Plus Query: 304 attcatttcccaccggattaccccttcaagcccccgaaggtctctttccgcaccaaggtg 363 |||||||| ||||| || || || |||||||| || ||||| ||||| | || ||||| Sbjct: 172 attcattttccacctgactatccattcaagccaccaaaggtagctttcaggacaaaggtt 231 Query: 364 ttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaacagtgg 423 ||||||||||||||||| ||||| ||||||||||||||||||||| | |||||||||||| Sbjct: 232 ttccacccgaacatcaatagcaatggcagcatttgccttgacattttgaaggaacagtgg 291 Query: 424 agccc 428 ||||| Sbjct: 292 agccc 296 Score = 63.9 bits (32), Expect = 4e-07 Identities = 95/116 (81%) Strand = Plus / Plus Query: 145 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 204 ||||| |||||| |||| ||||||||||| ||||| || ||||| || ||||| ||||| Sbjct: 13 atggcatccaagcggattctcaaggagcttaaggatctccagaaagatcctcctacctct 72 Query: 205 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggccactatcatggg 260 ||||| || || || |||| ||| || |||||||| ||||| || || |||||||| Sbjct: 73 tgcagtgctggcccagtagctgaagatatgttccattggcaagcaacaatcatggg 128
>dbj|D17786.1|RICKN6922 Oryza sativa KN69 mRNA for ubiquitin-conjugating enzyme, partial CDS Length = 311 Score = 111 bits (56), Expect = 2e-21 Identities = 74/80 (92%) Strand = Plus / Plus Query: 346 tctttccgcaccaaggtgttccacccgaacatcaacagcaacggcagcatttgccttgac 405 ||||||||||||||||| |||||||||||||| || ||||| |||||||||||||| ||| Sbjct: 97 tctttccgcaccaaggttttccacccgaacattaatagcaatggcagcatttgcctcgac 156 Query: 406 attctcaaggaacagtggag 425 || ||||||||||||||||| Sbjct: 157 atcctcaaggaacagtggag 176
>gb|AY109411.1| Zea mays CL25406_3 mRNA sequence Length = 1037 Score = 109 bits (55), Expect = 8e-21 Identities = 91/103 (88%) Strand = Plus / Minus Query: 146 tggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctcat 205 ||||||| |||||||||| |||||||| ||||| || |||||||||||||||||||| | Sbjct: 531 tggcgtcaaagaggatccagaaggagctcaaggatcttcagaaggaccctcccacctcgt 472 Query: 206 gcagcgcaggtcctgtaggtgaggacatgttccactggcaggc 248 |||| ||||||||||| ||||| || || |||||||||||||| Sbjct: 471 gcagtgcaggtcctgttggtgaagatatattccactggcaggc 429 Score = 109 bits (55), Expect = 8e-21 Identities = 76/83 (91%) Strand = Plus / Minus Query: 349 ttccgcaccaaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacatt 408 |||||||||||||||||||| || ||||||||||||||||| ||||| ||||||||||| Sbjct: 328 ttccgcaccaaggtgttccatccaaacatcaacagcaacgggagcatctgccttgacatc 269 Query: 409 ctcaaggaacagtggagcccggc 431 || ||||| |||||||||||||| Sbjct: 268 ctgaaggaccagtggagcccggc 246
>dbj|AK099284.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023129D13, full insert sequence Length = 754 Score = 103 bits (52), Expect = 5e-19 Identities = 91/104 (87%) Strand = Plus / Plus Query: 145 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 204 |||||||| |||||||| | |||||||| ||||| ||||||||||| || || || ||| Sbjct: 106 atggcgtcaaagaggatacagaaggagctcaaggatctgcagaaggatccccctacatca 165 Query: 205 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggc 248 ||||| ||||||||||| ||||| |||||||||||||||||||| Sbjct: 166 tgcagtgcaggtcctgttggtgaagacatgttccactggcaggc 209 Score = 93.7 bits (47), Expect = 4e-16 Identities = 101/119 (84%) Strand = Plus / Plus Query: 310 ttcccaccggattaccccttcaagcccccgaaggtctctttccgcaccaaggtgttccac 369 ||||| || ||||| |||||||| || || ||||| | || ||||||||||| ||||| Sbjct: 271 ttccctcctgattatcccttcaaaccacccaaggtggcgtttcgcaccaaggttttccat 330 Query: 370 ccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaacagtggagccc 428 || ||||||||||||||||| ||||||||||||||||| || ||||| || |||||||| Sbjct: 331 ccaaacatcaacagcaacgggagcatttgccttgacatccttaaggaccaatggagccc 389
>dbj|AK063826.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-122-A09, full insert sequence Length = 767 Score = 103 bits (52), Expect = 5e-19 Identities = 91/104 (87%) Strand = Plus / Plus Query: 145 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 204 |||||||| |||||||| | |||||||| ||||| ||||||||||| || || || ||| Sbjct: 116 atggcgtcaaagaggatacagaaggagctcaaggatctgcagaaggatccccctacatca 175 Query: 205 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggc 248 ||||| ||||||||||| ||||| |||||||||||||||||||| Sbjct: 176 tgcagtgcaggtcctgttggtgaagacatgttccactggcaggc 219 Score = 93.7 bits (47), Expect = 4e-16 Identities = 101/119 (84%) Strand = Plus / Plus Query: 310 ttcccaccggattaccccttcaagcccccgaaggtctctttccgcaccaaggtgttccac 369 ||||| || ||||| |||||||| || || ||||| | || ||||||||||| ||||| Sbjct: 281 ttccctcctgattatcccttcaaaccacccaaggtggcgtttcgcaccaaggttttccat 340 Query: 370 ccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaacagtggagccc 428 || ||||||||||||||||| ||||||||||||||||| || ||||| || |||||||| Sbjct: 341 ccaaacatcaacagcaacgggagcatttgccttgacatccttaaggaccaatggagccc 399
>emb|AJ867286.1| Oryza sativa (indica cultivar-group) mRNA for ubiquitin conjugating enzyme E2 (ubc4 gene) Length = 444 Score = 103 bits (52), Expect = 5e-19 Identities = 91/104 (87%) Strand = Plus / Plus Query: 145 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 204 |||||||| |||||||| | |||||||| ||||| ||||||||||| || || || ||| Sbjct: 1 atggcgtcaaagaggatacagaaggagctcaaggatctgcagaaggatccccctacatca 60 Query: 205 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggc 248 ||||| ||||||||||| ||||| |||||||||||||||||||| Sbjct: 61 tgcagtgcaggtcctgttggtgaagacatgttccactggcaggc 104 Score = 93.7 bits (47), Expect = 4e-16 Identities = 101/119 (84%) Strand = Plus / Plus Query: 310 ttcccaccggattaccccttcaagcccccgaaggtctctttccgcaccaaggtgttccac 369 ||||| || ||||| |||||||| || || ||||| | || ||||||||||| ||||| Sbjct: 166 ttccctcctgattatcccttcaaaccacccaaggtggcgtttcgcaccaaggttttccat 225 Query: 370 ccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaacagtggagccc 428 || ||||||||||||||||| ||||||||||||||||| || ||||| || |||||||| Sbjct: 226 ccaaacatcaacagcaacgggagcatttgccttgacatccttaaggaccaatggagccc 284
>dbj|AB074411.1| Oryza sativa (japonica cultivar-group) mRNA for ubiquitin-conjugating enzyme OsUBC5a, complete cds Length = 731 Score = 103 bits (52), Expect = 5e-19 Identities = 91/104 (87%) Strand = Plus / Plus Query: 145 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 204 |||||||| |||||||| | |||||||| ||||| ||||||||||| || || || ||| Sbjct: 104 atggcgtcaaagaggatacagaaggagctcaaggatctgcagaaggatccccctacatca 163 Query: 205 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggc 248 ||||| ||||||||||| ||||| |||||||||||||||||||| Sbjct: 164 tgcagtgcaggtcctgttggtgaagacatgttccactggcaggc 207 Score = 93.7 bits (47), Expect = 4e-16 Identities = 101/119 (84%) Strand = Plus / Plus Query: 310 ttcccaccggattaccccttcaagcccccgaaggtctctttccgcaccaaggtgttccac 369 ||||| || ||||| |||||||| || || ||||| | || ||||||||||| ||||| Sbjct: 269 ttccctcctgattatcccttcaaaccacccaaggtggcgtttcgcaccaaggttttccat 328 Query: 370 ccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaacagtggagccc 428 || ||||||||||||||||| ||||||||||||||||| || ||||| || |||||||| Sbjct: 329 ccaaacatcaacagcaacgggagcatttgccttgacatccttaaggaccaatggagccc 387
>gb|DQ222513.1| Solanum tuberosum clone 117E03 ubiquitin conjugating enzyme E2-like mRNA, complete cds Length = 835 Score = 99.6 bits (50), Expect = 7e-18 Identities = 107/126 (84%) Strand = Plus / Plus Query: 303 cattcatttcccaccggattaccccttcaagcccccgaaggtctctttccgcaccaaggt 362 ||||||||| ||||| || || || |||||||| || ||||| ||||| | || ||||| Sbjct: 204 cattcattttccacctgactatccattcaagccaccaaaggtagctttcaggacaaaggt 263 Query: 363 gttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaacagtg 422 ||||||||||||||||| ||||| |||||||| ||||| |||||| | ||||||||||| Sbjct: 264 tttccacccgaacatcaatagcaatggcagcatatgcctagacattttgaaggaacagtg 323 Query: 423 gagccc 428 |||||| Sbjct: 324 gagccc 329 Score = 79.8 bits (40), Expect = 7e-12 Identities = 97/116 (83%) Strand = Plus / Plus Query: 145 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 204 ||||| |||||| |||| ||||||||||||||||| || ||||| || ||||||||||| Sbjct: 46 atggcatccaagcggattctcaaggagctgaaggatctccagaaagatcctcccacctct 105 Query: 205 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggccactatcatggg 260 |||||||| || || |||| ||| || ||||| || ||||| || || |||||||| Sbjct: 106 tgcagcgctggcccagtagctgaagatatgtttcattggcaagcaacaatcatggg 161
>gb|BT009605.1| Triticum aestivum clone wre1n.pk0086.d1:fis, full insert mRNA sequence Length = 832 Score = 99.6 bits (50), Expect = 7e-18 Identities = 113/134 (84%) Strand = Plus / Plus Query: 298 gtcaacattcatttcccaccggattaccccttcaagcccccgaaggtctctttccgcacc 357 |||||||| |||||||| || ||||||||||| ||||| || || || ||||| || Sbjct: 244 gtcaacatccatttccctcctgattacccctttaagcctccaaaagtgaatttccaaaca 303 Query: 358 aaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaa 417 ||||||| ||||||||||||||| |||||||||||| ||||| ||||| |||||||| Sbjct: 304 aaggtgtatcacccgaacatcaactccaacggcagcatctgcctggacatcctcaaggag 363 Query: 418 cagtggagcccggc 431 |||||||||||||| Sbjct: 364 cagtggagcccggc 377 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 235 ttccactggcaggccactatcatggg 260 ||||||||||||||||| |||||||| Sbjct: 181 ttccactggcaggccacaatcatggg 206
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 99.6 bits (50), Expect = 7e-18 Identities = 65/70 (92%) Strand = Plus / Plus Query: 143 ccatggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacct 202 |||||||||||||| |||||||||||||||| ||||||||||||||||| || ||||||| Sbjct: 9115295 ccatggcgtccaagcggatcctcaaggagctcaaggacctgcagaaggatccccccacct 9115354 Query: 203 catgcagcgc 212 | |||||||| Sbjct: 9115355 cctgcagcgc 9115364 Score = 83.8 bits (42), Expect = 4e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 355 accaaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaag 414 |||||||||||||| || ||||| |||||||| |||| ||| ||||||||||| |||||| Sbjct: 1079028 accaaggtgttccatccaaacataaacagcaatggcaacatctgccttgacatcctcaag 1079087 Query: 415 gaacagtggagccc 428 || ||||||||||| Sbjct: 1079088 gaccagtggagccc 1079101 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 358 aaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaa 417 |||||||||||||| ||||| || |||||||| ||||| |||||||| || | ||||| Sbjct: 9117552 aaggtgttccacccaaacattaatagcaacggaagcatatgccttgatatcttgaaggag 9117611 Query: 418 cagtggag 425 |||||||| Sbjct: 9117612 cagtggag 9117619 Score = 48.1 bits (24), Expect = 0.024 Identities = 33/36 (91%) Strand = Plus / Plus Query: 229 gacatgttccactggcaggccactatcatggggccc 264 ||||||||||||||||| || || |||||||||||| Sbjct: 1078772 gacatgttccactggcaagcaacaatcatggggccc 1078807 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 79 cggccgccgccgccacagcaccgccg 104 ||||||||||||||||||| |||||| Sbjct: 4245461 cggccgccgccgccacagccccgccg 4245436 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 88 ccgccacagcaccgccgaccccgtc 112 |||||| |||||||||||||||||| Sbjct: 11828094 ccgccagagcaccgccgaccccgtc 11828070
>dbj|AP005777.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0026F09 Length = 124371 Score = 99.6 bits (50), Expect = 7e-18 Identities = 65/70 (92%) Strand = Plus / Plus Query: 143 ccatggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacct 202 |||||||||||||| |||||||||||||||| ||||||||||||||||| || ||||||| Sbjct: 18058 ccatggcgtccaagcggatcctcaaggagctcaaggacctgcagaaggatccccccacct 18117 Query: 203 catgcagcgc 212 | |||||||| Sbjct: 18118 cctgcagcgc 18127 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 358 aaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaa 417 |||||||||||||| ||||| || |||||||| ||||| |||||||| || | ||||| Sbjct: 20315 aaggtgttccacccaaacattaatagcaacggaagcatatgccttgatatcttgaaggag 20374 Query: 418 cagtggag 425 |||||||| Sbjct: 20375 cagtggag 20382
>dbj|AK100516.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100E07, full insert sequence Length = 2600 Score = 99.6 bits (50), Expect = 7e-18 Identities = 92/106 (86%) Strand = Plus / Plus Query: 144 catggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctc 203 |||||| || ||| ||||||||||||| || |||||||||||||| || ||||| || || Sbjct: 140 catggcatcgaagcggatcctcaaggaactaaaggacctgcagaaagatcctccaacatc 199 Query: 204 atgcagcgcaggtcctgtaggtgaggacatgttccactggcaggcc 249 |||||| |||||||||| |||||||| |||||||| ||||||||| Sbjct: 200 atgcagtgcaggtcctgctggtgaggatatgttccattggcaggcc 245
>ref|NM_191107.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 447 Score = 97.6 bits (49), Expect = 3e-17 Identities = 106/125 (84%) Strand = Plus / Plus Query: 304 attcatttcccaccggattaccccttcaagcccccgaaggtctctttccgcaccaaggtg 363 ||||||||||| ||||| |||||||||||||| || ||||| |||||| || ||||| Sbjct: 160 attcatttccccccggactaccccttcaagcctccaaaggtatctttcaagacaaaggtc 219 Query: 364 ttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaacagtgg 423 ||||| || |||||||| ||||| || ||||| |||||||||||||| ||||| || ||| Sbjct: 220 ttccatccaaacatcaatagcaatggaagcatatgccttgacattcttaaggagcaatgg 279 Query: 424 agccc 428 ||||| Sbjct: 280 agccc 284 Score = 95.6 bits (48), Expect = 1e-16 Identities = 90/104 (86%) Strand = Plus / Plus Query: 145 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 204 ||||| || ||| ||||||||||||| || |||||||||||||| || ||||| || ||| Sbjct: 1 atggcatcgaagcggatcctcaaggaactaaaggacctgcagaaagatcctccaacatca 60 Query: 205 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggc 248 ||||| |||||||||| |||||||| |||||||| |||||||| Sbjct: 61 tgcagtgcaggtcctgctggtgaggatatgttccattggcaggc 104
>gb|DQ207855.1| Solanum tuberosum clone 078A09 ubiquitin-conjugating enzyme 8-like mRNA, complete cds Length = 757 Score = 97.6 bits (49), Expect = 3e-17 Identities = 109/129 (84%) Strand = Plus / Plus Query: 303 cattcatttcccaccggattaccccttcaagcccccgaaggtctctttccgcaccaaggt 362 ||||||||| ||||| ||||| || || ||||| || ||||| |||| | || ||||| Sbjct: 222 cattcattttccacccgattatccatttaagcctccaaaggtagcttttaggacaaaggt 281 Query: 363 gttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaacagtg 422 || ||||| |||||||||||||| |||||||||||||| |||||||| |||||||| || Sbjct: 282 ttttcacccaaacatcaacagcaatggcagcatttgcctcgacattctgaaggaacaatg 341 Query: 423 gagcccggc 431 ||||||||| Sbjct: 342 gagcccggc 350 Score = 44.1 bits (22), Expect = 0.37 Identities = 61/74 (82%) Strand = Plus / Plus Query: 145 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 204 ||||| ||||||||||| || || ||||| ||||| || ||||| || ||||| ||||| Sbjct: 64 atggcatccaagaggattctgaaagagctcaaggatctccagaaagatcctcctacctct 123 Query: 205 tgcagcgcaggtcc 218 ||||| || ||||| Sbjct: 124 tgcagtgctggtcc 137
>gb|AY104144.1| Zea mays PCO100898 mRNA sequence Length = 831 Score = 97.6 bits (49), Expect = 3e-17 Identities = 88/101 (87%) Strand = Plus / Plus Query: 160 atcctcaaggagctgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcct 219 ||||||||||| | |||||| |||| ||||||||||| || |||||||| ||||||||| Sbjct: 149 atcctcaaggaattaaaggacttgcaaaaggaccctccaacatcatgcagtgcaggtcct 208 Query: 220 gtaggtgaggacatgttccactggcaggccactatcatggg 260 | |||||||| ||||||||||||||||| || |||||||| Sbjct: 209 gctggtgaggatatgttccactggcaggcaaccatcatggg 249 Score = 83.8 bits (42), Expect = 4e-13 Identities = 111/134 (82%) Strand = Plus / Plus Query: 295 ttggtcaacattcatttcccaccggattaccccttcaagcccccgaaggtctctttccgc 354 ||||| |||||||||||||| || || |||||||||||||| || ||||| ||||| Sbjct: 284 ttggtgaacattcatttcccgccagactaccccttcaagcctccaaaggtatcttttaag 343 Query: 355 accaaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaag 414 || ||||| ||||| || |||||||| || || || ||||| || ||||||||||| ||| Sbjct: 344 acgaaggtcttccatccaaacatcaatagtaatggaagcatatgtcttgacattcttaag 403 Query: 415 gaacagtggagccc 428 || ||||||||||| Sbjct: 404 gagcagtggagccc 417
>gb|AY389716.1| Hyacinthus orientalis ubiquitin-conjugating enzyme 9 mRNA, partial cds Length = 650 Score = 95.6 bits (48), Expect = 1e-16 Identities = 78/88 (88%) Strand = Plus / Plus Query: 173 tgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggtgaggaca 232 ||||||| ||||||||||| |||||||| |||||||||||||||||||| | ||| |||| Sbjct: 3 tgaaggatctgcagaaggatcctcccacttcatgcagcgcaggtcctgtggctgaagaca 62 Query: 233 tgttccactggcaggccactatcatggg 260 ||||||| ||||| || ||||| ||||| Sbjct: 63 tgttccattggcaagcaactataatggg 90 Score = 48.1 bits (24), Expect = 0.024 Identities = 39/44 (88%) Strand = Plus / Plus Query: 358 aaggtgttccacccgaacatcaacagcaacggcagcatttgcct 401 ||||| |||||||| || ||||| |||||||| ||||||||||| Sbjct: 191 aaggtcttccacccaaatatcaatagcaacgggagcatttgcct 234
>ref|NM_192451.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1125 Score = 93.7 bits (47), Expect = 4e-16 Identities = 101/119 (84%) Strand = Plus / Plus Query: 310 ttcccaccggattaccccttcaagcccccgaaggtctctttccgcaccaaggtgttccac 369 ||||| || ||||| |||||||| || || ||||| | || ||||||||||| ||||| Sbjct: 619 ttccctcctgattatcccttcaaaccacccaaggtggcgtttcgcaccaaggttttccat 678 Query: 370 ccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaacagtggagccc 428 || ||||||||||||||||| ||||||||||||||||| || ||||| || |||||||| Sbjct: 679 ccaaacatcaacagcaacgggagcatttgccttgacatccttaaggaccaatggagccc 737 Score = 65.9 bits (33), Expect = 1e-07 Identities = 86/104 (82%), Gaps = 6/104 (5%) Strand = Plus / Plus Query: 145 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 204 |||||||| |||||||| | |||||||| ||||| ||||||||||| || || || ||| Sbjct: 460 atggcgtcaaagaggatacagaaggagctcaaggatctgcagaaggatccccctacatca 519 Query: 205 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggc 248 ||||| |||||| ||||| |||||||||||||||||||| Sbjct: 520 tgcag------tcctgttggtgaagacatgttccactggcaggc 557
>gb|AY085670.1| Arabidopsis thaliana clone 16865 mRNA, complete sequence Length = 747 Score = 93.7 bits (47), Expect = 4e-16 Identities = 209/263 (79%) Strand = Plus / Plus Query: 166 aaggagctgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggt 225 |||||||||||||| || ||||| |||||||| ||||| ||||| |||||||| || | | Sbjct: 153 aaggagctgaaggatctccagaaagaccctccaacctcctgcagtgcaggtccagttgct 212 Query: 226 gaggacatgttccactggcaggccactatcatggggccctcggagagcccgttcaccggt 285 || |||||||| || ||||| || || || ||||| || | ||||| |||| | || Sbjct: 213 gaagacatgtttcattggcaagctacaattatgggtcctgcagagagtccgtattcaggc 272 Query: 286 ggtctatttttggtcaacattcatttcccaccggattaccccttcaagcccccgaaggtc 345 ||| | ||| | || | |||||| ||||| ||||| || || |||||||| || ||||| Sbjct: 273 ggtgtgtttctcgttaccattcacttccctccggactatcctttcaagccaccaaaggtt 332 Query: 346 tctttccgcaccaaggtgttccacccgaacatcaacagcaacggcagcatttgccttgac 405 | || | || |||||||| ||||| || |||||||||||||| ||||||||||||||| Sbjct: 333 gcatttaggacgaaggtgtttcaccctaatatcaacagcaacggaagcatttgccttgac 392 Query: 406 attctcaaggaacagtggagccc 428 ||| | || ||||| |||||||| Sbjct: 393 attttgaaagaacaatggagccc 415
>gb|AY489135.1| Capsicum annuum ubiquitin-conjugating enzyme 8 mRNA, complete cds Length = 713 Score = 91.7 bits (46), Expect = 2e-15 Identities = 106/126 (84%) Strand = Plus / Plus Query: 303 cattcatttcccaccggattaccccttcaagcccccgaaggtctctttccgcaccaaggt 362 ||||||||| ||||| ||||| || |||||||| || ||||| |||| | |||||||| Sbjct: 218 cattcattttccacctgattatccattcaagcctccaaaggtagcttttaggaccaaggt 277 Query: 363 gttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaacagtg 422 || ||||| || |||||||||||||| ||||||||||| |||||| | |||||||| || Sbjct: 278 atttcacccaaatatcaacagcaacggtagcatttgcctcgacattttgaaggaacaatg 337 Query: 423 gagccc 428 |||||| Sbjct: 338 gagccc 343 Score = 50.1 bits (25), Expect = 0.006 Identities = 82/101 (81%) Strand = Plus / Plus Query: 145 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 204 ||||| ||||||||||| || || ||||| ||||| || ||||| || ||||| ||||| Sbjct: 60 atggcatccaagaggattctgaaagagctcaaggatctccagaaagatcctcctacctct 119 Query: 205 tgcagcgcaggtcctgtaggtgaggacatgttccactggca 245 ||||| || || ||||| | ||| || ||||| |||||||| Sbjct: 120 tgcagtgctggccctgttgctgaagatatgtttcactggca 160
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Minus Query: 143 ccatggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacct 202 |||||||||||||| |||||||||||||||| ||||||||||||||||| || || |||| Sbjct: 17799515 ccatggcgtccaagcggatcctcaaggagctcaaggacctgcagaaggatcccccaacct 17799456 Query: 203 catgcagcgc 212 | |||||||| Sbjct: 17799455 cctgcagcgc 17799446 Score = 77.8 bits (39), Expect = 3e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 358 aaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaa 417 ||||| |||||||| ||||||||||| ||||| ||||| |||||||| || || |||||| Sbjct: 17798084 aaggttttccacccaaacatcaacagtaacggaagcatctgccttgatatcctgaaggaa 17798025 Query: 418 cagtggagccc 428 ||||||||||| Sbjct: 17798024 cagtggagccc 17798014
>dbj|AP003618.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0561B08 Length = 161083 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Minus Query: 143 ccatggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacct 202 |||||||||||||| |||||||||||||||| ||||||||||||||||| || || |||| Sbjct: 4704 ccatggcgtccaagcggatcctcaaggagctcaaggacctgcagaaggatcccccaacct 4645 Query: 203 catgcagcgc 212 | |||||||| Sbjct: 4644 cctgcagcgc 4635 Score = 77.8 bits (39), Expect = 3e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 358 aaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaa 417 ||||| |||||||| ||||||||||| ||||| ||||| |||||||| || || |||||| Sbjct: 3273 aaggttttccacccaaacatcaacagtaacggaagcatctgccttgatatcctgaaggaa 3214 Query: 418 cagtggagccc 428 ||||||||||| Sbjct: 3213 cagtggagccc 3203
>dbj|AP004743.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0026G06 Length = 123129 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Minus Query: 143 ccatggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacct 202 |||||||||||||| |||||||||||||||| ||||||||||||||||| || || |||| Sbjct: 69937 ccatggcgtccaagcggatcctcaaggagctcaaggacctgcagaaggatcccccaacct 69878 Query: 203 catgcagcgc 212 | |||||||| Sbjct: 69877 cctgcagcgc 69868 Score = 77.8 bits (39), Expect = 3e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 358 aaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaa 417 ||||| |||||||| ||||||||||| ||||| ||||| |||||||| || || |||||| Sbjct: 68506 aaggttttccacccaaacatcaacagtaacggaagcatctgccttgatatcctgaaggaa 68447 Query: 418 cagtggagccc 428 ||||||||||| Sbjct: 68446 cagtggagccc 68436
>dbj|AK066232.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013057M05, full insert sequence Length = 2141 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Plus Query: 143 ccatggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacct 202 |||||||||||||| |||||||||||||||| ||||||||||||||||| || || |||| Sbjct: 38 ccatggcgtccaagcggatcctcaaggagctcaaggacctgcagaaggatcccccaacct 97 Query: 203 catgcagcgc 212 | |||||||| Sbjct: 98 cctgcagcgc 107 Score = 77.8 bits (39), Expect = 3e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 358 aaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaa 417 ||||| |||||||| ||||||||||| ||||| ||||| |||||||| || || |||||| Sbjct: 1469 aaggttttccacccaaacatcaacagtaacggaagcatctgccttgatatcctgaaggaa 1528 Query: 418 cagtggagccc 428 ||||||||||| Sbjct: 1529 cagtggagccc 1539
>gb|DQ294262.1| Solanum tuberosum clone 130D10 ubiquitin-conjugating enzyme E2-like protein mRNA, complete cds Length = 806 Score = 91.7 bits (46), Expect = 2e-15 Identities = 85/98 (86%) Strand = Plus / Plus Query: 166 aaggagctgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggt 225 |||||||| ||||| |||||||||| |||||||||||||||||||| ||||| || | | Sbjct: 101 aaggagcttaaggatttgcagaaggatcctcccacctcatgcagcgctggtccagtggct 160 Query: 226 gaggacatgttccactggcaggccactatcatggggcc 263 ||||| |||||||| ||||| || || ||||||||||| Sbjct: 161 gaggatatgttccattggcaagcaacaatcatggggcc 198
>gb|DQ249816.1| Capsicum annuum ubiquitin-conjugating enzyme E2 mRNA, complete cds Length = 678 Score = 91.7 bits (46), Expect = 2e-15 Identities = 106/126 (84%) Strand = Plus / Plus Query: 303 cattcatttcccaccggattaccccttcaagcccccgaaggtctctttccgcaccaaggt 362 ||||||||| ||||| ||||| || |||||||| || ||||| |||| | |||||||| Sbjct: 229 cattcattttccacctgattatccattcaagcctccaaaggtagcttttaggaccaaggt 288 Query: 363 gttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaacagtg 422 || ||||| || |||||||||||||| ||||||||||| |||||| | |||||||| || Sbjct: 289 atttcacccaaatatcaacagcaacggtagcatttgcctcgacattttgaaggaacaatg 348 Query: 423 gagccc 428 |||||| Sbjct: 349 gagccc 354 Score = 50.1 bits (25), Expect = 0.006 Identities = 82/101 (81%) Strand = Plus / Plus Query: 145 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 204 ||||| ||||||||||| || || ||||| ||||| || ||||| || ||||| ||||| Sbjct: 71 atggcatccaagaggattctgaaagagctcaaggatctccagaaagatcctcctacctct 130 Query: 205 tgcagcgcaggtcctgtaggtgaggacatgttccactggca 245 ||||| || || ||||| | ||| || ||||| |||||||| Sbjct: 131 tgcagtgctggccctgttgctgaagatatgtttcactggca 171
>ref|NM_111703.2| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT3G08690 mRNA, complete cds Length = 724 Score = 89.7 bits (45), Expect = 7e-15 Identities = 207/261 (79%) Strand = Plus / Plus Query: 144 catggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctc 203 |||||| || ||||||||| | |||||||| ||||| ||||||||||| ||||| | Sbjct: 103 catggcttctaagaggatcttgaaggagctcaaggatctgcagaaggatcctccttcaaa 162 Query: 204 atgcagcgcaggtcctgtaggtgaggacatgttccactggcaggccactatcatggggcc 263 |||||||| ||||| || | ||||||||||||||| ||||| |||||||||||||| || Sbjct: 163 ctgcagcgctggtccggtggctgaggacatgttccattggcaagccactatcatgggacc 222 Query: 264 ctcggagagcccgttcaccggtggtctatttttggtcaacattcatttcccaccggatta 323 | || || |||| |||| || | |||||||| ||||||||||| |||||||| Sbjct: 223 tcctgaaagtccgtatgccggaggagtgtttttggtttctattcatttccctccggatta 282 Query: 324 ccccttcaagcccccgaaggtctctttccgcaccaaggtgttccacccgaacatcaacag 383 || |||||||| || ||||| ||||| || ||||||| ||| || |||||||| || Sbjct: 283 tcctttcaagccaccaaaggtgtcttttaagactaaggtgtaccatccaaacatcaatag 342 Query: 384 caacggcagcatttgccttga 404 ||| || || ||||||||||| Sbjct: 343 caatggaagtatttgccttga 363
>gb|BT013767.1| Lycopersicon esculentum clone 132651R, mRNA sequence Length = 844 Score = 89.7 bits (45), Expect = 7e-15 Identities = 222/281 (79%) Strand = Plus / Plus Query: 145 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 204 |||||||| |||||||| | |||||||| ||||| ||||||||||| || ||||| ||| Sbjct: 163 atggcgtcgaagaggatattgaaggagctcaaggatctgcagaaggatccccccacatca 222 Query: 205 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggccactatcatggggccc 264 ||||| || ||||| || | ||||| |||||||| ||||| || || ||||||||||| Sbjct: 223 tgcagtgctggtccagtggcagaggatatgttccattggcaagcaacaatcatggggcct 282 Query: 265 tcggagagcccgttcaccggtggtctatttttggtcaacattcatttcccaccggattac 324 | || ||||| | | || ||| |||||||||| ||||||||||| || ||||| Sbjct: 283 accgatagcccttatgctggaggtgtatttttggtttcaattcatttccctccagattat 342 Query: 325 cccttcaagcccccgaaggtctctttccgcaccaaggtgttccacccgaacatcaacagc 384 || || ||||| || ||||| | ||| | || ||||| ||||| || |||||||||||| Sbjct: 343 ccttttaagcctccaaaggttgccttcagaactaaggttttccatcccaacatcaacagc 402 Query: 385 aacggcagcatttgccttgacattctcaaggaacagtggag 425 || || || ||||| || || ||||| ||||| |||||||| Sbjct: 403 aatggaagtatttgtctggatattcttaaggagcagtggag 443
>gb|AY063869.1| Arabidopsis thaliana putative E2, ubiquitin-conjugating enzyme UBC11 (At3g08690) mRNA, complete cds Length = 733 Score = 89.7 bits (45), Expect = 7e-15 Identities = 207/261 (79%) Strand = Plus / Plus Query: 144 catggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctc 203 |||||| || ||||||||| | |||||||| ||||| ||||||||||| ||||| | Sbjct: 96 catggcttctaagaggatcttgaaggagctcaaggatctgcagaaggatcctccttcaaa 155 Query: 204 atgcagcgcaggtcctgtaggtgaggacatgttccactggcaggccactatcatggggcc 263 |||||||| ||||| || | ||||||||||||||| ||||| |||||||||||||| || Sbjct: 156 ctgcagcgctggtccggtggctgaggacatgttccattggcaagccactatcatgggacc 215 Query: 264 ctcggagagcccgttcaccggtggtctatttttggtcaacattcatttcccaccggatta 323 | || || |||| |||| || | |||||||| ||||||||||| |||||||| Sbjct: 216 tcctgaaagtccgtatgccggaggagtgtttttggtttctattcatttccctccggatta 275 Query: 324 ccccttcaagcccccgaaggtctctttccgcaccaaggtgttccacccgaacatcaacag 383 || |||||||| || ||||| ||||| || ||||||| ||| || |||||||| || Sbjct: 276 tcctttcaagccaccaaaggtgtcttttaagactaaggtgtaccatccaaacatcaatag 335 Query: 384 caacggcagcatttgccttga 404 ||| || || ||||||||||| Sbjct: 336 caatggaagtatttgccttga 356
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 89.7 bits (45), Expect = 7e-15 Identities = 69/77 (89%) Strand = Plus / Minus Query: 352 cgcaccaaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctc 411 ||||||||||| ||||| || ||||||||||||||||| ||||||||||||||||| || Sbjct: 26774924 cgcaccaaggttttccatccaaacatcaacagcaacgggagcatttgccttgacatcctt 26774865 Query: 412 aaggaacagtggagccc 428 ||||| || |||||||| Sbjct: 26774864 aaggaccaatggagccc 26774848 Score = 73.8 bits (37), Expect = 4e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 144 catggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctc 203 ||||||||| ||| ||||||||||||| || |||||||||||||| || ||||| || || Sbjct: 34910940 catggcgtcgaagcggatcctcaaggaactaaaggacctgcagaaagatcctccaacatc 34910999 Query: 204 atgcagcgcaggt 216 |||||| |||||| Sbjct: 34911000 atgcagtgcaggt 34911012 Score = 69.9 bits (35), Expect = 6e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 358 aaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaa 417 ||||| ||||| || |||||||| ||||| || ||||| ||||| |||||||| |||||| Sbjct: 34912040 aaggtcttccatccaaacatcaatagcaatggaagcatatgcctcgacattcttaaggaa 34912099 Query: 418 cagtggagccc 428 ||||||||||| Sbjct: 34912100 cagtggagccc 34912110 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 144 catggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctc 203 |||||| || ||| ||||||||||||| || |||||||||||||| || ||||| || || Sbjct: 34932287 catggcatcgaagcggatcctcaaggaactaaaggacctgcagaaagatcctccaacatc 34932346 Query: 204 atgcagcgcaggt 216 |||||| |||||| Sbjct: 34932347 atgcagtgcaggt 34932359 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 358 aaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaa 417 ||||| ||||| || |||||||| ||||| || ||||| |||||||||||||| ||||| Sbjct: 34933532 aaggtcttccatccaaacatcaatagcaatggaagcatatgccttgacattcttaaggag 34933591 Query: 418 cagtggagccc 428 || |||||||| Sbjct: 34933592 caatggagccc 34933602 Score = 58.0 bits (29), Expect = 2e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 145 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 204 |||||||| |||||||| | |||||||| ||||| ||||||||||| || || || ||| Sbjct: 26777401 atggcgtcaaagaggatacagaaggagctcaaggatctgcagaaggatccccctacatca 26777342 Query: 205 tgcagcgcaggtc 217 ||||| ||||||| Sbjct: 26777341 tgcagtgcaggtc 26777329 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 212 caggtcctgtaggtgaggacatgttccactggcaggc 248 |||||||||| ||||| |||||||||||||||||||| Sbjct: 26775791 caggtcctgttggtgaagacatgttccactggcaggc 26775755 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 304 attcatttcccaccggattaccccttcaagcccccgaaggt 344 ||||||||||| ||||| |||||||||||||| || ||||| Sbjct: 34933002 attcatttccccccggactaccccttcaagcctccaaaggt 34933042 Score = 44.1 bits (22), Expect = 0.37 Identities = 34/38 (89%) Strand = Plus / Plus Query: 295 ttggtcaacattcatttcccaccggattaccccttcaa 332 ||||| || ||||||||||| ||||| ||||||||||| Sbjct: 34911691 ttggtgaatattcatttccccccggactaccccttcaa 34911728 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 tgccttgacattctcaagga 416 |||||||||||||||||||| Sbjct: 27662668 tgccttgacattctcaagga 27662649 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 274 ccgttcaccggtggtctatttttg 297 ||||||||||| |||||||||||| Sbjct: 11607879 ccgttcaccggaggtctatttttg 11607856
>dbj|AP003291.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0684E06 Length = 147004 Score = 89.7 bits (45), Expect = 7e-15 Identities = 69/77 (89%) Strand = Plus / Minus Query: 352 cgcaccaaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctc 411 ||||||||||| ||||| || ||||||||||||||||| ||||||||||||||||| || Sbjct: 10573 cgcaccaaggttttccatccaaacatcaacagcaacgggagcatttgccttgacatcctt 10514 Query: 412 aaggaacagtggagccc 428 ||||| || |||||||| Sbjct: 10513 aaggaccaatggagccc 10497 Score = 58.0 bits (29), Expect = 2e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 145 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 204 |||||||| |||||||| | |||||||| ||||| ||||||||||| || || || ||| Sbjct: 13050 atggcgtcaaagaggatacagaaggagctcaaggatctgcagaaggatccccctacatca 12991 Query: 205 tgcagcgcaggtc 217 ||||| ||||||| Sbjct: 12990 tgcagtgcaggtc 12978 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 212 caggtcctgtaggtgaggacatgttccactggcaggc 248 |||||||||| ||||| |||||||||||||||||||| Sbjct: 11440 caggtcctgttggtgaagacatgttccactggcaggc 11404
>dbj|AP003294.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0694A04 Length = 141476 Score = 89.7 bits (45), Expect = 7e-15 Identities = 69/77 (89%) Strand = Plus / Minus Query: 352 cgcaccaaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctc 411 ||||||||||| ||||| || ||||||||||||||||| ||||||||||||||||| || Sbjct: 122016 cgcaccaaggttttccatccaaacatcaacagcaacgggagcatttgccttgacatcctt 121957 Query: 412 aaggaacagtggagccc 428 ||||| || |||||||| Sbjct: 121956 aaggaccaatggagccc 121940 Score = 58.0 bits (29), Expect = 2e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 145 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 204 |||||||| |||||||| | |||||||| ||||| ||||||||||| || || || ||| Sbjct: 124493 atggcgtcaaagaggatacagaaggagctcaaggatctgcagaaggatccccctacatca 124434 Query: 205 tgcagcgcaggtc 217 ||||| ||||||| Sbjct: 124433 tgcagtgcaggtc 124421 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 212 caggtcctgtaggtgaggacatgttccactggcaggc 248 |||||||||| ||||| |||||||||||||||||||| Sbjct: 122883 caggtcctgttggtgaagacatgttccactggcaggc 122847
>gb|AF176040.1|AF176040 Mesembryanthemum crystallinum ubiquitin-conjugating enzyme UBC2 (Ubc2) mRNA, complete cds Length = 809 Score = 89.7 bits (45), Expect = 7e-15 Identities = 87/101 (86%) Strand = Plus / Plus Query: 145 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 204 ||||| || ||||||||| | |||||||| ||||| ||||| ||||| ||||| ||||| Sbjct: 81 atggcatcgaagaggatcttgaaggagctcaaggatctgcaaaaggatcctccaacctct 140 Query: 205 tgcagcgcaggtcctgtaggtgaggacatgttccactggca 245 |||||||| |||||||| ||||| ||||||||||| ||||| Sbjct: 141 tgcagcgctggtcctgttggtgaagacatgttccattggca 181
>gb|L23762.1|TOM1KUC Lycopersicon esculentum ubiquitin carrier protein (Ubc) mRNA, complete cds Length = 825 Score = 89.7 bits (45), Expect = 7e-15 Identities = 222/281 (79%) Strand = Plus / Plus Query: 145 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 204 |||||||| |||||||| | |||||||| ||||| ||||||||||| || ||||| ||| Sbjct: 167 atggcgtcgaagaggatattgaaggagctcaaggatctgcagaaggatccccccacatca 226 Query: 205 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggccactatcatggggccc 264 ||||| || ||||| || | ||||| |||||||| ||||| || || ||||||||||| Sbjct: 227 tgcagtgctggtccagtggcagaggatatgttccattggcaagcaacaatcatggggcct 286 Query: 265 tcggagagcccgttcaccggtggtctatttttggtcaacattcatttcccaccggattac 324 | || ||||| | | || ||| |||||||||| ||||||||||| || ||||| Sbjct: 287 accgatagcccttatgctggaggtgtatttttggtttcaattcatttccctccagattat 346 Query: 325 cccttcaagcccccgaaggtctctttccgcaccaaggtgttccacccgaacatcaacagc 384 || || ||||| || ||||| | ||| | || ||||| ||||| || |||||||||||| Sbjct: 347 ccttttaagcctccaaaggttgccttcagaactaaggttttccatcccaacatcaacagc 406 Query: 385 aacggcagcatttgccttgacattctcaaggaacagtggag 425 || || || ||||| || || ||||| ||||| |||||||| Sbjct: 407 aatggaagtatttgtctggatattcttaaggagcagtggag 447
>gb|AY091223.1| Arabidopsis thaliana putative ubiquitin conjugating enzyme 11 (UBC11) (At3g08690) mRNA, complete cds Length = 478 Score = 87.7 bits (44), Expect = 3e-14 Identities = 206/260 (79%) Strand = Plus / Plus Query: 145 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 204 ||||| || ||||||||| | |||||||| ||||| ||||||||||| ||||| | Sbjct: 1 atggcttctaagaggatcttgaaggagctcaaggatctgcagaaggatcctccttcaaac 60 Query: 205 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggccactatcatggggccc 264 |||||||| ||||| || | ||||||||||||||| ||||| |||||||||||||| || Sbjct: 61 tgcagcgctggtccggtggctgaggacatgttccattggcaagccactatcatgggacct 120 Query: 265 tcggagagcccgttcaccggtggtctatttttggtcaacattcatttcccaccggattac 324 | || || |||| |||| || | |||||||| ||||||||||| |||||||| Sbjct: 121 cctgaaagtccgtatgccggaggagtgtttttggtttctattcatttccctccggattat 180 Query: 325 cccttcaagcccccgaaggtctctttccgcaccaaggtgttccacccgaacatcaacagc 384 || |||||||| || ||||| ||||| || ||||||| ||| || |||||||| ||| Sbjct: 181 cctttcaagccaccaaaggtgtcttttaagactaaggtgtaccatccaaacatcaatagc 240 Query: 385 aacggcagcatttgccttga 404 || || || ||||||||||| Sbjct: 241 aatggaagtatttgccttga 260
>gb|DQ027025.1| Arabidopsis thaliana ubiquitinating enzyme (At3g08690) mRNA, complete cds Length = 447 Score = 87.7 bits (44), Expect = 3e-14 Identities = 206/260 (79%) Strand = Plus / Plus Query: 145 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 204 ||||| || ||||||||| | |||||||| ||||| ||||||||||| ||||| | Sbjct: 1 atggcttctaagaggatcttgaaggagctcaaggatctgcagaaggatcctccttcaaac 60 Query: 205 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggccactatcatggggccc 264 |||||||| ||||| || | ||||||||||||||| ||||| |||||||||||||| || Sbjct: 61 tgcagcgctggtccggtggctgaggacatgttccattggcaagccactatcatgggacct 120 Query: 265 tcggagagcccgttcaccggtggtctatttttggtcaacattcatttcccaccggattac 324 | || || |||| |||| || | |||||||| ||||||||||| |||||||| Sbjct: 121 cctgaaagtccgtatgccggaggagtgtttttggtttctattcatttccctccggattat 180 Query: 325 cccttcaagcccccgaaggtctctttccgcaccaaggtgttccacccgaacatcaacagc 384 || |||||||| || ||||| ||||| || ||||||| ||| || |||||||| ||| Sbjct: 181 cctttcaagccaccaaaggtgtcttttaagactaaggtgtaccatccaaacatcaatagc 240 Query: 385 aacggcagcatttgccttga 404 || || || ||||||||||| Sbjct: 241 aatggaagtatttgccttga 260
>ref|NM_124709.2| Arabidopsis thaliana UBC10; ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT5G53300 (UBC10) transcript variant AT5G53300.2 mRNA, complete cds Length = 837 Score = 85.7 bits (43), Expect = 1e-13 Identities = 100/119 (84%) Strand = Plus / Plus Query: 307 catttcccaccggattaccccttcaagcccccgaaggtctctttccgcaccaaggtgttc 366 |||||||| ||||||||||| |||||||| || ||||| | || | |||||||||||| Sbjct: 265 catttccctccggattacccattcaagcctcctaaggtggcctttaggaccaaggtgttc 324 Query: 367 cacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaacagtggag 425 || || ||||| ||||||||||| ||||||||||| ||||| | ||||| |||||||| Sbjct: 325 catcccaacattaacagcaacggtagcatttgcctcgacatcttgaaggagcagtggag 383 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 145 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 204 |||||||| ||| ||||| | ||||| ||||||| || |||||||| || || || ||| Sbjct: 103 atggcgtcgaagcggatcttgaaggaattgaaggatctccagaaggatccacctacatca 162 Query: 205 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggc 248 || |||||||||||||| | ||| |||||||| ||||||||||| Sbjct: 163 tgtagcgcaggtcctgttgctgaagacatgtttcactggcaggc 206
>ref|NM_180850.1| Arabidopsis thaliana UBC10; ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT5G53300 (UBC10) transcript variant AT5G53300.1 mRNA, complete cds Length = 856 Score = 85.7 bits (43), Expect = 1e-13 Identities = 100/119 (84%) Strand = Plus / Plus Query: 307 catttcccaccggattaccccttcaagcccccgaaggtctctttccgcaccaaggtgttc 366 |||||||| ||||||||||| |||||||| || ||||| | || | |||||||||||| Sbjct: 284 catttccctccggattacccattcaagcctcctaaggtggcctttaggaccaaggtgttc 343 Query: 367 cacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaacagtggag 425 || || ||||| ||||||||||| ||||||||||| ||||| | ||||| |||||||| Sbjct: 344 catcccaacattaacagcaacggtagcatttgcctcgacatcttgaaggagcagtggag 402 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 145 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 204 |||||||| ||| ||||| | ||||| ||||||| || |||||||| || || || ||| Sbjct: 122 atggcgtcgaagcggatcttgaaggaattgaaggatctccagaaggatccacctacatca 181 Query: 205 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggc 248 || |||||||||||||| | ||| |||||||| ||||||||||| Sbjct: 182 tgtagcgcaggtcctgttgctgaagacatgtttcactggcaggc 225
>emb|Z14991.1|ATUBC10 A.thaliana UBC10 mRNA for ubiquitin conjugating enzyme homolog Length = 818 Score = 85.7 bits (43), Expect = 1e-13 Identities = 100/119 (84%) Strand = Plus / Plus Query: 307 catttcccaccggattaccccttcaagcccccgaaggtctctttccgcaccaaggtgttc 366 |||||||| ||||||||||| |||||||| || ||||| | || | |||||||||||| Sbjct: 295 catttccctccggattacccattcaagcctcctaaggtggcctttaggaccaaggtgttc 354 Query: 367 cacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaacagtggag 425 || || ||||| ||||||||||| ||||||||||| ||||| | ||||| |||||||| Sbjct: 355 catcccaacattaacagcaacggtagcatttgcctcgacatcttgaaggagcagtggag 413 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 145 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 204 |||||||| ||| ||||| | ||||| ||||||| || |||||||| || || || ||| Sbjct: 133 atggcgtcgaagcggatcttgaaggaattgaaggatctccagaaggatccacctacatca 192 Query: 205 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggc 248 || |||||||||||||| | ||| |||||||| ||||||||||| Sbjct: 193 tgtagcgcaggtcctgttgctgaagacatgtttcactggcaggc 236
>gb|AY113937.1| Arabidopsis thaliana putative E2, ubiquitin-conjugating enzyme UBC10 (At5g53300) mRNA, complete cds Length = 478 Score = 85.7 bits (43), Expect = 1e-13 Identities = 100/119 (84%) Strand = Plus / Plus Query: 307 catttcccaccggattaccccttcaagcccccgaaggtctctttccgcaccaaggtgttc 366 |||||||| ||||||||||| |||||||| || ||||| | || | |||||||||||| Sbjct: 163 catttccctccggattacccattcaagcctcctaaggtggcctttaggaccaaggtgttc 222 Query: 367 cacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaacagtggag 425 || || ||||| ||||||||||| ||||||||||| ||||| | ||||| |||||||| Sbjct: 223 catcccaacattaacagcaacggtagcatttgcctcgacatcttgaaggagcagtggag 281 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 145 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 204 |||||||| ||| ||||| | ||||| ||||||| || |||||||| || || || ||| Sbjct: 1 atggcgtcgaagcggatcttgaaggaattgaaggatctccagaaggatccacctacatca 60 Query: 205 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggc 248 || |||||||||||||| | ||| |||||||| ||||||||||| Sbjct: 61 tgtagcgcaggtcctgttgctgaagacatgtttcactggcaggc 104
>gb|AF326872.1| Arabidopsis thaliana putative E2, ubiquitin-conjugating enzyme UBC10 (At5g53300) mRNA, complete cds Length = 768 Score = 85.7 bits (43), Expect = 1e-13 Identities = 100/119 (84%) Strand = Plus / Plus Query: 307 catttcccaccggattaccccttcaagcccccgaaggtctctttccgcaccaaggtgttc 366 |||||||| ||||||||||| |||||||| || ||||| | || | |||||||||||| Sbjct: 257 catttccctccggattacccattcaagcctcctaaggtggcctttaggaccaaggtgttc 316 Query: 367 cacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaacagtggag 425 || || ||||| ||||||||||| ||||||||||| ||||| | ||||| |||||||| Sbjct: 317 catcccaacattaacagcaacggtagcatttgcctcgacatcttgaaggagcagtggag 375 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 145 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 204 |||||||| ||| ||||| | ||||| ||||||| || |||||||| || || || ||| Sbjct: 95 atggcgtcgaagcggatcttgaaggaattgaaggatctccagaaggatccacctacatca 154 Query: 205 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggc 248 || |||||||||||||| | ||| |||||||| ||||||||||| Sbjct: 155 tgtagcgcaggtcctgttgctgaagacatgtttcactggcaggc 198
>gb|AY129488.1| Arabidopsis thaliana AT5g53300/K19E1_10 mRNA, complete cds Length = 447 Score = 85.7 bits (43), Expect = 1e-13 Identities = 100/119 (84%) Strand = Plus / Plus Query: 307 catttcccaccggattaccccttcaagcccccgaaggtctctttccgcaccaaggtgttc 366 |||||||| ||||||||||| |||||||| || ||||| | || | |||||||||||| Sbjct: 163 catttccctccggattacccattcaagcctcctaaggtggcctttaggaccaaggtgttc 222 Query: 367 cacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaacagtggag 425 || || ||||| ||||||||||| ||||||||||| ||||| | ||||| |||||||| Sbjct: 223 catcccaacattaacagcaacggtagcatttgcctcgacatcttgaaggagcagtggag 281 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 145 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 204 |||||||| ||| ||||| | ||||| ||||||| || |||||||| || || || ||| Sbjct: 1 atggcgtcgaagcggatcttgaaggaattgaaggatctccagaaggatccacctacatca 60 Query: 205 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggc 248 || |||||||||||||| | ||| |||||||| ||||||||||| Sbjct: 61 tgtagcgcaggtcctgttgctgaagacatgtttcactggcaggc 104
>gb|AY065059.1| Arabidopsis thaliana AT5g53300/K19E1_10 mRNA, complete cds Length = 752 Score = 85.7 bits (43), Expect = 1e-13 Identities = 100/119 (84%) Strand = Plus / Plus Query: 307 catttcccaccggattaccccttcaagcccccgaaggtctctttccgcaccaaggtgttc 366 |||||||| ||||||||||| |||||||| || ||||| | || | |||||||||||| Sbjct: 257 catttccctccggattacccattcaagcctcctaaggtggcctttaggaccaaggtgttc 316 Query: 367 cacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaacagtggag 425 || || ||||| ||||||||||| ||||||||||| ||||| | ||||| |||||||| Sbjct: 317 catcccaacattaacagcaacggtagcatttgcctcgacatcttgaaggagcagtggag 375 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 145 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 204 |||||||| ||| ||||| | ||||| ||||||| || |||||||| || || || ||| Sbjct: 95 atggcgtcgaagcggatcttgaaggaattgaaggatctccagaaggatccacctacatca 154 Query: 205 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggc 248 || |||||||||||||| | ||| |||||||| ||||||||||| Sbjct: 155 tgtagcgcaggtcctgttgctgaagacatgtttcactggcaggc 198
>gb|AY039566.1| Arabidopsis thaliana AT5g53300/K19E1_10 mRNA, complete cds Length = 713 Score = 85.7 bits (43), Expect = 1e-13 Identities = 100/119 (84%) Strand = Plus / Plus Query: 307 catttcccaccggattaccccttcaagcccccgaaggtctctttccgcaccaaggtgttc 366 |||||||| ||||||||||| |||||||| || ||||| | || | |||||||||||| Sbjct: 261 catttccctccggattacccattcaagcctcctaaggtggcctttaggaccaaggtgttc 320 Query: 367 cacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaacagtggag 425 || || ||||| ||||||||||| ||||||||||| ||||| | ||||| |||||||| Sbjct: 321 catcccaacattaacagcaacggtagcatttgcctcgacatcttgaaggagcagtggag 379 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 145 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 204 |||||||| ||| ||||| | ||||| ||||||| || |||||||| || || || ||| Sbjct: 99 atggcgtcgaagcggatcttgaaggaattgaaggatctccagaaggatccacctacatca 158 Query: 205 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggc 248 || |||||||||||||| | ||| |||||||| ||||||||||| Sbjct: 159 tgtagcgcaggtcctgttgctgaagacatgtttcactggcaggc 202
>gb|AF325005.2|AF325005 Arabidopsis thaliana AT5g53300 (AT5g53300/K19E1_10) mRNA, complete cds Length = 731 Score = 85.7 bits (43), Expect = 1e-13 Identities = 100/119 (84%) Strand = Plus / Plus Query: 307 catttcccaccggattaccccttcaagcccccgaaggtctctttccgcaccaaggtgttc 366 |||||||| ||||||||||| |||||||| || ||||| | || | |||||||||||| Sbjct: 252 catttccctccggattacccattcaagcctcctaaggtggcctttaggaccaaggtgttc 311 Query: 367 cacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaacagtggag 425 || || ||||| ||||||||||| ||||||||||| ||||| | ||||| |||||||| Sbjct: 312 catcccaacattaacagcaacggtagcatttgcctcgacatcttgaaggagcagtggag 370 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 145 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 204 |||||||| ||| ||||| | ||||| ||||||| || |||||||| || || || ||| Sbjct: 90 atggcgtcgaagcggatcttgaaggaattgaaggatctccagaaggatccacctacatca 149 Query: 205 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggc 248 || |||||||||||||| | ||| |||||||| ||||||||||| Sbjct: 150 tgtagcgcaggtcctgttgctgaagacatgtttcactggcaggc 193
>gb|AF324718.2|AF324718 Arabidopsis thaliana AT5g53300 (AT5g53300/K19E1_10) mRNA, complete cds Length = 748 Score = 85.7 bits (43), Expect = 1e-13 Identities = 100/119 (84%) Strand = Plus / Plus Query: 307 catttcccaccggattaccccttcaagcccccgaaggtctctttccgcaccaaggtgttc 366 |||||||| ||||||||||| |||||||| || ||||| | || | |||||||||||| Sbjct: 253 catttccctccggattacccattcaagcctcctaaggtggcctttaggaccaaggtgttc 312 Query: 367 cacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaacagtggag 425 || || ||||| ||||||||||| ||||||||||| ||||| | ||||| |||||||| Sbjct: 313 catcccaacattaacagcaacggtagcatttgcctcgacatcttgaaggagcagtggag 371 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 145 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 204 |||||||| ||| ||||| | ||||| ||||||| || |||||||| || || || ||| Sbjct: 91 atggcgtcgaagcggatcttgaaggaattgaaggatctccagaaggatccacctacatca 150 Query: 205 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggc 248 || |||||||||||||| | ||| |||||||| ||||||||||| Sbjct: 151 tgtagcgcaggtcctgttgctgaagacatgtttcactggcaggc 194
>emb|BX829864.1|CNS0A1IT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB41ZF02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 708 Score = 85.7 bits (43), Expect = 1e-13 Identities = 100/119 (84%) Strand = Plus / Plus Query: 307 catttcccaccggattaccccttcaagcccccgaaggtctctttccgcaccaaggtgttc 366 |||||||| ||||||||||| |||||||| || ||||| | || | |||||||||||| Sbjct: 238 catttccctccggattacccattcaagcctcctaaggtggcctttaggaccaaggtgttc 297 Query: 367 cacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaacagtggag 425 || || ||||| ||||||||||| ||||||||||| ||||| | ||||| |||||||| Sbjct: 298 catcccaacattaacagcaacggtagcatttgcctcgacatcttgaaggagcagtggag 356 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 145 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 204 |||||||| ||| ||||| | ||||| ||||||| || |||||||| || || || ||| Sbjct: 76 atggcgtcgaagcggatcttgaaggaattgaaggatctccagaaggatccacctacatca 135 Query: 205 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggc 248 || |||||||||||||| | ||| |||||||| ||||||||||| Sbjct: 136 tgtagcgcaggtcctgttgctgaagacatgtttcactggcaggc 179
>emb|BX833981.1|CNS0A0DI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL88ZC07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 769 Score = 85.7 bits (43), Expect = 1e-13 Identities = 100/119 (84%) Strand = Plus / Plus Query: 307 catttcccaccggattaccccttcaagcccccgaaggtctctttccgcaccaaggtgttc 366 |||||||| ||||||||||| |||||||| || ||||| | || | |||||||||||| Sbjct: 250 catttccctccggattacccattcaagcctcctaaggtggcctttaggaccaaggtgttc 309 Query: 367 cacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaacagtggag 425 || || ||||| ||||||||||| ||||||||||| ||||| | ||||| |||||||| Sbjct: 310 catcccaacattaacagcaacggtagcatttgcctcgacatcttgaaggagcagtggag 368 Score = 63.9 bits (32), Expect = 4e-07 Identities = 86/104 (82%) Strand = Plus / Plus Query: 145 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 204 |||||||| ||| ||||| | ||||| ||||||| || |||||||| || || || ||| Sbjct: 88 atggcgtcgaagcggatcttgaaggaattgaaggatctccagaaggatccacctacatca 147 Query: 205 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggc 248 || ||||||||||||| | ||| |||||||| ||||||||||| Sbjct: 148 tgtggcgcaggtcctgttgctgaagacatgtttcactggcaggc 191
>gb|AY086447.1| Arabidopsis thaliana clone 25162 mRNA, complete sequence Length = 743 Score = 85.7 bits (43), Expect = 1e-13 Identities = 100/119 (84%) Strand = Plus / Plus Query: 307 catttcccaccggattaccccttcaagcccccgaaggtctctttccgcaccaaggtgttc 366 |||||||| ||||||||||| |||||||| || ||||| | || | |||||||||||| Sbjct: 261 catttccctccggattacccattcaagcctcctaaggtggcctttaggaccaaggtgttc 320 Query: 367 cacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaacagtggag 425 || || ||||| ||||||||||| ||||||||||| ||||| | ||||| |||||||| Sbjct: 321 catcccaacattaacagcaacggtagcatttgcctcgacatcttgaaggagcagtggag 379 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 145 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 204 |||||||| ||| ||||| | ||||| ||||||| || |||||||| || || || ||| Sbjct: 99 atggcgtcgaagcggatcttgaaggaattgaaggatctccagaaggatccacctacatca 158 Query: 205 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggc 248 || |||||||||||||| | ||| |||||||| ||||||||||| Sbjct: 159 tgtagcgcaggtcctgttgctgaagacatgtttcactggcaggc 202
>gb|DQ027024.1| Arabidopsis thaliana ubiquitinating enzyme (At5g53300) mRNA, complete cds Length = 447 Score = 85.7 bits (43), Expect = 1e-13 Identities = 100/119 (84%) Strand = Plus / Plus Query: 307 catttcccaccggattaccccttcaagcccccgaaggtctctttccgcaccaaggtgttc 366 |||||||| ||||||||||| |||||||| || ||||| | || | |||||||||||| Sbjct: 163 catttccctccggattacccattcaagcctcctaaggtggcctttaggaccaaggtgttc 222 Query: 367 cacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaacagtggag 425 || || ||||| ||||||||||| ||||||||||| ||||| | ||||| |||||||| Sbjct: 223 catcccaacattaacagcaacggtagcatttgcctcgacatcttgaaggagcagtggag 281 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 145 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 204 |||||||| ||| ||||| | ||||| ||||||| || |||||||| || || || ||| Sbjct: 1 atggcgtcgaagcggatcttgaaggaattgaaggatctccagaaggatccacctacatca 60 Query: 205 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggc 248 || |||||||||||||| | ||| |||||||| ||||||||||| Sbjct: 61 tgtagcgcaggtcctgttgctgaagacatgtttcactggcaggc 104
>gb|L00640.1|ATHUBCC Arabidopsis thaliana ubiquitin conjugating enzyme mRNA, complete cds Length = 818 Score = 85.7 bits (43), Expect = 1e-13 Identities = 100/119 (84%) Strand = Plus / Plus Query: 307 catttcccaccggattaccccttcaagcccccgaaggtctctttccgcaccaaggtgttc 366 |||||||| ||||||||||| |||||||| || ||||| | || | |||||||||||| Sbjct: 295 catttccctccggattacccattcaagcctcctaaggtggcctttaggaccaaggtgttc 354 Query: 367 cacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaacagtggag 425 || || ||||| ||||||||||| ||||||||||| ||||| | ||||| |||||||| Sbjct: 355 catcccaacattaacagcaacggtagcatttgcctcgacatcttgaaggagcagtggag 413 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 145 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 204 |||||||| ||| ||||| | ||||| ||||||| || |||||||| || || || ||| Sbjct: 133 atggcgtcgaagcggatcttgaaggaattgaaggatctccagaaggatccacctacatca 192 Query: 205 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggc 248 || |||||||||||||| | ||| |||||||| ||||||||||| Sbjct: 193 tgtagcgcaggtcctgttgctgaagacatgtttcactggcaggc 236
>gb|AF532622.1| Glycine max ubiquitin-conjugation enzyme gene, complete cds Length = 929 Score = 83.8 bits (42), Expect = 4e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 160 atcctcaaggagctgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcct 219 |||||||||||||| |||||| ||||||| ||||| || || || |||||||| ||||| Sbjct: 199 atcctcaaggagctcaaggacttgcagaaagacccaccaacttcttgcagcgctggtcca 258 Query: 220 gtaggtgaggacatgttccactggca 245 |||| ||||||||||||||| ||||| Sbjct: 259 gtagctgaggacatgttccattggca 284 Score = 73.8 bits (37), Expect = 4e-10 Identities = 103/125 (82%) Strand = Plus / Plus Query: 304 attcatttcccaccggattaccccttcaagcccccgaaggtctctttccgcaccaaggtg 363 ||||| ||||| |||||||| || |||||||| || ||||| | || | || |||||| Sbjct: 343 attcacttccctccggattatcctttcaagcctcctaaggttgcctttaggactaaggtg 402 Query: 364 ttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaacagtgg 423 || |||||||||||||| ||||| || |||||||| ||||| || || ||||| |||||| Sbjct: 403 tttcacccgaacatcaatagcaatggtagcatttgtcttgatatcctgaaggagcagtgg 462 Query: 424 agccc 428 ||||| Sbjct: 463 agccc 467
>ref|XM_463908.1| Oryza sativa (japonica cultivar-group), mRNA Length = 815 Score = 83.8 bits (42), Expect = 4e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 355 accaaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaag 414 |||||||||||||| || ||||| |||||||| |||| ||| ||||||||||| |||||| Sbjct: 298 accaaggtgttccatccaaacataaacagcaatggcaacatctgccttgacatcctcaag 357 Query: 415 gaacagtggagccc 428 || ||||||||||| Sbjct: 358 gaccagtggagccc 371 Score = 65.9 bits (33), Expect = 1e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 164 tcaaggagctgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtag 223 |||||||||| |||||||| |||| ||| || || || || |||||||| || ||||| Sbjct: 107 tcaaggagctcaaggaccttcagagggatccgccgacttcctgcagcgccgggcctgtgt 166 Query: 224 gtgaggacatgttccactggcaggccactatcatggggccc 264 ||| ||||||||||||||||| || || |||||||||||| Sbjct: 167 ctgatgacatgttccactggcaagcaacaatcatggggccc 207
>gb|AY486137.1| Capsicum annuum ubiquitin-conjugating protein mRNA, complete cds Length = 578 Score = 83.8 bits (42), Expect = 4e-13 Identities = 102/122 (83%) Strand = Plus / Plus Query: 304 attcatttcccaccggattaccccttcaagcccccgaaggtctctttccgcaccaaggtg 363 ||||||||||| |||||||| || |||||||| || ||||| |||| | || ||||| Sbjct: 92 attcatttccctccggattatcctttcaagcctccaaaggttgcttttagaactaaggtt 151 Query: 364 ttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaacagtgg 423 ||||| || |||||||| ||||| || || ||||||||||| ||||||||||| |||||| Sbjct: 152 ttccatcctaacatcaatagcaatggaagtatttgccttgatattctcaaggagcagtgg 211 Query: 424 ag 425 || Sbjct: 212 ag 213
>dbj|AP004078.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1020_C02 Length = 124578 Score = 83.8 bits (42), Expect = 4e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 355 accaaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaag 414 |||||||||||||| || ||||| |||||||| |||| ||| ||||||||||| |||||| Sbjct: 31552 accaaggtgttccatccaaacataaacagcaatggcaacatctgccttgacatcctcaag 31611 Query: 415 gaacagtggagccc 428 || ||||||||||| Sbjct: 31612 gaccagtggagccc 31625 Score = 48.1 bits (24), Expect = 0.024 Identities = 33/36 (91%) Strand = Plus / Plus Query: 229 gacatgttccactggcaggccactatcatggggccc 264 ||||||||||||||||| || || |||||||||||| Sbjct: 31296 gacatgttccactggcaagcaacaatcatggggccc 31331
>dbj|AP005851.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0088N06 Length = 123454 Score = 83.8 bits (42), Expect = 4e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 355 accaaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaag 414 |||||||||||||| || ||||| |||||||| |||| ||| ||||||||||| |||||| Sbjct: 67736 accaaggtgttccatccaaacataaacagcaatggcaacatctgccttgacatcctcaag 67795 Query: 415 gaacagtggagccc 428 || ||||||||||| Sbjct: 67796 gaccagtggagccc 67809 Score = 48.1 bits (24), Expect = 0.024 Identities = 33/36 (91%) Strand = Plus / Plus Query: 229 gacatgttccactggcaggccactatcatggggccc 264 ||||||||||||||||| || || |||||||||||| Sbjct: 67480 gacatgttccactggcaagcaacaatcatggggccc 67515
>dbj|AK120237.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043N18, full insert sequence Length = 815 Score = 83.8 bits (42), Expect = 4e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 355 accaaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaag 414 |||||||||||||| || ||||| |||||||| |||| ||| ||||||||||| |||||| Sbjct: 298 accaaggtgttccatccaaacataaacagcaatggcaacatctgccttgacatcctcaag 357 Query: 415 gaacagtggagccc 428 || ||||||||||| Sbjct: 358 gaccagtggagccc 371 Score = 65.9 bits (33), Expect = 1e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 164 tcaaggagctgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtag 223 |||||||||| |||||||| |||| ||| || || || || |||||||| || ||||| Sbjct: 107 tcaaggagctcaaggaccttcagagggatccgccgacttcctgcagcgccgggcctgtgt 166 Query: 224 gtgaggacatgttccactggcaggccactatcatggggccc 264 ||| ||||||||||||||||| || || |||||||||||| Sbjct: 167 ctgatgacatgttccactggcaagcaacaatcatggggccc 207
>ref|NM_124997.2| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT5G56150 transcript variant AT5G56150.2 mRNA, complete cds Length = 744 Score = 81.8 bits (41), Expect = 2e-12 Identities = 158/197 (80%) Strand = Plus / Plus Query: 232 atgttccactggcaggccactatcatggggccctcggagagcccgttcaccggtggtcta 291 |||||||| ||||| || ||||||||||| || | || |||||||| |||| ||| | Sbjct: 166 atgttccaatggcaagcaactatcatgggtccagcagatagcccgtttgccggaggtgtg 225 Query: 292 tttttggtcaacattcatttcccaccggattaccccttcaagcccccgaaggtctctttc 351 ||| | || | |||||| |||||||| |||||||| |||||||| || ||||| | ||| Sbjct: 226 tttcttgttaccattcacttcccaccagattaccctttcaagccaccaaaggttgccttc 285 Query: 352 cgcaccaaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctc 411 || |||||||| | ||||| ||||||||||| || || || || || ||||||||||| Sbjct: 286 cggaccaaggtttatcacccaaacatcaacagtaatggaagtatctgtcttgacattctg 345 Query: 412 aaggaacagtggagccc 428 || || ||||||||||| Sbjct: 346 aaagagcagtggagccc 362
>ref|NM_180867.1| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT5G56150 transcript variant AT5G56150.1 mRNA, complete cds Length = 751 Score = 81.8 bits (41), Expect = 2e-12 Identities = 158/197 (80%) Strand = Plus / Plus Query: 232 atgttccactggcaggccactatcatggggccctcggagagcccgttcaccggtggtcta 291 |||||||| ||||| || ||||||||||| || | || |||||||| |||| ||| | Sbjct: 173 atgttccaatggcaagcaactatcatgggtccagcagatagcccgtttgccggaggtgtg 232 Query: 292 tttttggtcaacattcatttcccaccggattaccccttcaagcccccgaaggtctctttc 351 ||| | || | |||||| |||||||| |||||||| |||||||| || ||||| | ||| Sbjct: 233 tttcttgttaccattcacttcccaccagattaccctttcaagccaccaaaggttgccttc 292 Query: 352 cgcaccaaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctc 411 || |||||||| | ||||| ||||||||||| || || || || || ||||||||||| Sbjct: 293 cggaccaaggtttatcacccaaacatcaacagtaatggaagtatctgtcttgacattctg 352 Query: 412 aaggaacagtggagccc 428 || || ||||||||||| Sbjct: 353 aaagagcagtggagccc 369
>gb|AY081511.1| Arabidopsis thaliana ubiquitin-conjugating enzyme-like protein (MDA7.21) mRNA, complete cds Length = 479 Score = 81.8 bits (41), Expect = 2e-12 Identities = 158/197 (80%) Strand = Plus / Plus Query: 232 atgttccactggcaggccactatcatggggccctcggagagcccgttcaccggtggtcta 291 |||||||| ||||| || ||||||||||| || | || |||||||| |||| ||| | Sbjct: 88 atgttccaatggcaagcaactatcatgggtccagcagatagcccgtttgccggaggtgtg 147 Query: 292 tttttggtcaacattcatttcccaccggattaccccttcaagcccccgaaggtctctttc 351 ||| | || | |||||| |||||||| |||||||| |||||||| || ||||| | ||| Sbjct: 148 tttcttgttaccattcacttcccaccagattaccctttcaagccaccaaaggttgccttc 207 Query: 352 cgcaccaaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctc 411 || |||||||| | ||||| ||||||||||| || || || || || ||||||||||| Sbjct: 208 cggaccaaggtttatcacccaaacatcaacagtaatggaagtatctgtcttgacattctg 267 Query: 412 aaggaacagtggagccc 428 || || ||||||||||| Sbjct: 268 aaagagcagtggagccc 284
>gb|AY059806.1| Arabidopsis thaliana ubiquitin-conjugating enzyme-like protein (MDA7.21) mRNA, complete cds Length = 717 Score = 81.8 bits (41), Expect = 2e-12 Identities = 158/197 (80%) Strand = Plus / Plus Query: 232 atgttccactggcaggccactatcatggggccctcggagagcccgttcaccggtggtcta 291 |||||||| ||||| || ||||||||||| || | || |||||||| |||| ||| | Sbjct: 167 atgttccaatggcaagcaactatcatgggtccagcagatagcccgtttgccggaggtgtg 226 Query: 292 tttttggtcaacattcatttcccaccggattaccccttcaagcccccgaaggtctctttc 351 ||| | || | |||||| |||||||| |||||||| |||||||| || ||||| | ||| Sbjct: 227 tttcttgttaccattcacttcccaccagattaccctttcaagccaccaaaggttgccttc 286 Query: 352 cgcaccaaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctc 411 || |||||||| | ||||| ||||||||||| || || || || || ||||||||||| Sbjct: 287 cggaccaaggtttatcacccaaacatcaacagtaatggaagtatctgtcttgacattctg 346 Query: 412 aaggaacagtggagccc 428 || || ||||||||||| Sbjct: 347 aaagagcagtggagccc 363
>gb|AY084220.1| Arabidopsis thaliana clone 10022 mRNA, complete sequence Length = 750 Score = 81.8 bits (41), Expect = 2e-12 Identities = 158/197 (80%) Strand = Plus / Plus Query: 232 atgttccactggcaggccactatcatggggccctcggagagcccgttcaccggtggtcta 291 |||||||| ||||| || ||||||||||| || | || |||||||| |||| ||| | Sbjct: 173 atgttccaatggcaagcaactatcatgggtccagcagatagcccgtttgccggaggtgtg 232 Query: 292 tttttggtcaacattcatttcccaccggattaccccttcaagcccccgaaggtctctttc 351 ||| | || | |||||| |||||||| |||||||| |||||||| || ||||| | ||| Sbjct: 233 tttcttgttaccattcacttcccaccagattaccctttcaagccaccaaaggttgccttc 292 Query: 352 cgcaccaaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctc 411 || |||||||| | ||||| ||||||||||| || || || || || ||||||||||| Sbjct: 293 cggaccaaggtttatcacccaaacatcaacagtaatggaagtatctgtcttgacattctg 352 Query: 412 aaggaacagtggagccc 428 || || ||||||||||| Sbjct: 353 aaagagcagtggagccc 369
>gb|DQ027043.1| Arabidopsis thaliana ubiquitinating enzyme (At5g56150) mRNA, complete cds Length = 447 Score = 81.8 bits (41), Expect = 2e-12 Identities = 158/197 (80%) Strand = Plus / Plus Query: 232 atgttccactggcaggccactatcatggggccctcggagagcccgttcaccggtggtcta 291 |||||||| ||||| || ||||||||||| || | || |||||||| |||| ||| | Sbjct: 88 atgttccaatggcaagcaactatcatgggtccagcagatagcccgtttgccggaggtgtg 147 Query: 292 tttttggtcaacattcatttcccaccggattaccccttcaagcccccgaaggtctctttc 351 ||| | || | |||||| |||||||| |||||||| |||||||| || ||||| | ||| Sbjct: 148 tttcttgttaccattcacttcccaccagattaccctttcaagccaccaaaggttgccttc 207 Query: 352 cgcaccaaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctc 411 || |||||||| | ||||| ||||||||||| || || || || || ||||||||||| Sbjct: 208 cggaccaaggtttatcacccaaacatcaacagtaatggaagtatctgtcttgacattctg 267 Query: 412 aaggaacagtggagccc 428 || || ||||||||||| Sbjct: 268 aaagagcagtggagccc 284
>ref|XM_752036.1| Ustilago maydis 521 ubiquitin-conjugating enzyme E2-16 kDa (UM00982.1) partial mRNA Length = 444 Score = 79.8 bits (40), Expect = 7e-12 Identities = 88/104 (84%) Strand = Plus / Plus Query: 322 taccccttcaagcccccgaaggtctctttccgcaccaaggtgttccacccgaacatcaac 381 |||||||||||||| || ||||| ||||| ||||||| | | ||| |||||||||||| Sbjct: 178 taccccttcaagcctcccaaggtttctttttccaccaagatctaccatccgaacatcaac 237 Query: 382 agcaacggcagcatttgccttgacattctcaaggaacagtggag 425 |||||||||||||| || || |||||||||| || |||||||| Sbjct: 238 agcaacggcagcatctgtctcgacattctcagagaccagtggag 281
>ref|NM_180784.1| Arabidopsis thaliana UBC8 (UBIQUITIN CONJUGATING ENZYME 8); ubiquitin conjugating enzyme AT5G41700 (UBC8) transcript variant AT5G41700.2 mRNA, complete cds Length = 909 Score = 77.8 bits (39), Expect = 3e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 358 aaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaa 417 |||||||| ||||| || |||||||||||||| |||||||||||||||||| | || ||| Sbjct: 390 aaggtgtttcaccctaatatcaacagcaacggaagcatttgccttgacattttgaaagaa 449 Query: 418 cagtggagccc 428 || |||||||| Sbjct: 450 caatggagccc 460 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 166 aaggagctgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggt 225 |||||||||||||| || ||||| |||||||| ||||| ||||| |||||||| || | | Sbjct: 198 aaggagctgaaggatctccagaaagaccctccaacctcctgcagtgcaggtccagttgct 257 Query: 226 gaggacatgttccactggca 245 || |||||||| || ||||| Sbjct: 258 gaagacatgtttcattggca 277
>ref|NM_123535.2| Arabidopsis thaliana UBC8 (UBIQUITIN CONJUGATING ENZYME 8); ubiquitin conjugating enzyme AT5G41700 (UBC8) transcript variant AT5G41700.4 mRNA, complete cds Length = 803 Score = 77.8 bits (39), Expect = 3e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 358 aaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaa 417 |||||||| ||||| || |||||||||||||| |||||||||||||||||| | || ||| Sbjct: 284 aaggtgtttcaccctaatatcaacagcaacggaagcatttgccttgacattttgaaagaa 343 Query: 418 cagtggagccc 428 || |||||||| Sbjct: 344 caatggagccc 354 Score = 46.1 bits (23), Expect = 0.094 Identities = 38/43 (88%) Strand = Plus / Plus Query: 166 aaggagctgaaggacctgcagaaggaccctcccacctcatgca 208 |||||||||||||| || ||||| |||||||| ||||| |||| Sbjct: 89 aaggagctgaaggatctccagaaagaccctccaacctcctgca 131
>ref|NM_180785.1| Arabidopsis thaliana UBC8 (UBIQUITIN CONJUGATING ENZYME 8); ubiquitin conjugating enzyme AT5G41700 (UBC8) transcript variant AT5G41700.3 mRNA, complete cds Length = 1006 Score = 77.8 bits (39), Expect = 3e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 358 aaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaa 417 |||||||| ||||| || |||||||||||||| |||||||||||||||||| | || ||| Sbjct: 294 aaggtgtttcaccctaatatcaacagcaacggaagcatttgccttgacattttgaaagaa 353 Query: 418 cagtggagccc 428 || |||||||| Sbjct: 354 caatggagccc 364 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 166 aaggagctgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggt 225 |||||||||||||| || ||||| |||||||| ||||| ||||| |||||||| || | | Sbjct: 102 aaggagctgaaggatctccagaaagaccctccaacctcctgcagtgcaggtccagttgct 161 Query: 226 gaggacatgttccactggca 245 || |||||||| || ||||| Sbjct: 162 gaagacatgtttcattggca 181
>ref|NM_180783.1| Arabidopsis thaliana UBC8 (UBIQUITIN CONJUGATING ENZYME 8); ubiquitin conjugating enzyme AT5G41700 (UBC8) transcript variant AT5G41700.1 mRNA, complete cds Length = 864 Score = 77.8 bits (39), Expect = 3e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 358 aaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaa 417 |||||||| ||||| || |||||||||||||| |||||||||||||||||| | || ||| Sbjct: 345 aaggtgtttcaccctaatatcaacagcaacggaagcatttgccttgacattttgaaagaa 404 Query: 418 cagtggagccc 428 || |||||||| Sbjct: 405 caatggagccc 415 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 166 aaggagctgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggt 225 |||||||||||||| || ||||| |||||||| ||||| ||||| |||||||| || | | Sbjct: 153 aaggagctgaaggatctccagaaagaccctccaacctcctgcagtgcaggtccagttgct 212 Query: 226 gaggacatgttccactggca 245 || |||||||| || ||||| Sbjct: 213 gaagacatgtttcattggca 232
>gb|AY220735.1| Hordeum vulgare ubiquitin-conjugating enzyme (UBC) mRNA, complete cds Length = 758 Score = 77.8 bits (39), Expect = 3e-11 Identities = 99/119 (83%) Strand = Plus / Plus Query: 307 catttcccaccggattaccccttcaagcccccgaaggtctctttccgcaccaaggtgttc 366 |||||||| ||||| ||||| |||||||| |||||||| || ||| || ||||| ||| Sbjct: 265 catttccccccggactacccgttcaagcctccgaaggtatcgttcaagacaaaggtcttc 324 Query: 367 cacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaacagtggag 425 || ||||||||||| ||||| || ||||| ||||| |||||||| ||||| || ||||| Sbjct: 325 catccgaacatcaatagcaatggaagcatatgcctcgacattctgaaggagcaatggag 383
>emb|Z14989.1|ATUBC8 A.thaliana UBC8 gene for ubiquitin conjugating enzyme homolog Length = 1447 Score = 77.8 bits (39), Expect = 3e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 358 aaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaa 417 |||||||| ||||| || |||||||||||||| |||||||||||||||||| | || ||| Sbjct: 852 aaggtgtttcaccctaatatcaacagcaacggaagcatttgccttgacattttgaaagaa 911 Query: 418 cagtggagccc 428 || |||||||| Sbjct: 912 caatggagccc 922 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 166 aaggagctgaaggacctgcagaaggaccctcccacctcatgcagcgcaggt 216 |||||||||||||| || ||||| |||||||| ||||| ||||| |||||| Sbjct: 148 aaggagctgaaggatctccagaaagaccctccaacctcctgcagtgcaggt 198
>gb|AY063074.1| Arabidopsis thaliana putative ubiquitin-conjugating enzyme 8 (At5g41700) mRNA, complete cds Length = 478 Score = 77.8 bits (39), Expect = 3e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 358 aaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaa 417 |||||||| ||||| || |||||||||||||| |||||||||||||||||| | || ||| Sbjct: 214 aaggtgtttcaccctaatatcaacagcaacggaagcatttgccttgacattttgaaagaa 273 Query: 418 cagtggagccc 428 || |||||||| Sbjct: 274 caatggagccc 284 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 166 aaggagctgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggt 225 |||||||||||||| || ||||| |||||||| ||||| ||||| |||||||| || | | Sbjct: 22 aaggagctgaaggatctccagaaagaccctccaacctcctgcagtgcaggtccagttgct 81 Query: 226 gaggacatgttccactggca 245 || |||||||| || ||||| Sbjct: 82 gaagacatgtttcattggca 101
>gb|AF370257.1| Arabidopsis thaliana putative E2, ubiquitin-conjugating enzyme UBC8 (At5g41700) mRNA, complete cds Length = 810 Score = 77.8 bits (39), Expect = 3e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 358 aaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaa 417 |||||||| ||||| || |||||||||||||| |||||||||||||||||| | || ||| Sbjct: 339 aaggtgtttcaccctaatatcaacagcaacggaagcatttgccttgacattttgaaagaa 398 Query: 418 cagtggagccc 428 || |||||||| Sbjct: 399 caatggagccc 409 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 166 aaggagctgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggt 225 |||||||||||||| || ||||| |||||||| ||||| ||||| |||||||| || | | Sbjct: 147 aaggagctgaaggatctccagaaagaccctccaacctcctgcagtgcaggtccagttgct 206 Query: 226 gaggacatgttccactggca 245 || |||||||| || ||||| Sbjct: 207 gaagacatgtttcattggca 226
>gb|AY072514.1| Arabidopsis thaliana ubiquitin-conjugating enzyme E2-17 kD 8 (MBK23.24) mRNA, complete cds Length = 476 Score = 77.8 bits (39), Expect = 3e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 358 aaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaa 417 |||||||| ||||| || |||||||||||||| |||||||||||||||||| | || ||| Sbjct: 214 aaggtgtttcaccctaatatcaacagcaacggaagcatttgccttgacattttgaaagaa 273 Query: 418 cagtggagccc 428 || |||||||| Sbjct: 274 caatggagccc 284 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 166 aaggagctgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggt 225 |||||||||||||| || ||||| |||||||| ||||| ||||| |||||||| || | | Sbjct: 22 aaggagctgaaggatctccagaaagaccctccaacctcctgcagtgcaggtccagttgct 81 Query: 226 gaggacatgttccactggca 245 || |||||||| || ||||| Sbjct: 82 gaagacatgtttcattggca 101
>gb|AY057631.1| Arabidopsis thaliana AT5g41700/MBK23_24 mRNA, complete cds Length = 653 Score = 77.8 bits (39), Expect = 3e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 358 aaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaa 417 |||||||| ||||| || |||||||||||||| |||||||||||||||||| | || ||| Sbjct: 280 aaggtgtttcaccctaatatcaacagcaacggaagcatttgccttgacattttgaaagaa 339 Query: 418 cagtggagccc 428 || |||||||| Sbjct: 340 caatggagccc 350 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 166 aaggagctgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggt 225 |||||||||||||| || ||||| |||||||| ||||| ||||| |||||||| || | | Sbjct: 88 aaggagctgaaggatctccagaaagaccctccaacctcctgcagtgcaggtccagttgct 147 Query: 226 gaggacatgttccactggca 245 || |||||||| || ||||| Sbjct: 148 gaagacatgtttcattggca 167
>gb|AY054595.1| Arabidopsis thaliana ubiquitin-conjugating enzyme E2-17 kD 8 (ubiquitin-protein ligase 8) (ubiquitin carrier protein 8) (MBK23.24) mRNA, complete cds Length = 755 Score = 77.8 bits (39), Expect = 3e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 358 aaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaa 417 |||||||| ||||| || |||||||||||||| |||||||||||||||||| | || ||| Sbjct: 390 aaggtgtttcaccctaatatcaacagcaacggaagcatttgccttgacattttgaaagaa 449 Query: 418 cagtggagccc 428 || |||||||| Sbjct: 450 caatggagccc 460 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 166 aaggagctgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggt 225 |||||||||||||| || ||||| |||||||| ||||| ||||| |||||||| || | | Sbjct: 198 aaggagctgaaggatctccagaaagaccctccaacctcctgcagtgcaggtccagttgct 257 Query: 226 gaggacatgttccactggca 245 || |||||||| || ||||| Sbjct: 258 gaagacatgtttcattggca 277
>gb|AF325009.2|AF325009 Arabidopsis thaliana AT5g41700 (AT5g41700/MBK23_24) mRNA, complete cds Length = 667 Score = 77.8 bits (39), Expect = 3e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 358 aaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaa 417 |||||||| ||||| || |||||||||||||| |||||||||||||||||| | || ||| Sbjct: 285 aaggtgtttcaccctaatatcaacagcaacggaagcatttgccttgacattttgaaagaa 344 Query: 418 cagtggagccc 428 || |||||||| Sbjct: 345 caatggagccc 355 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 166 aaggagctgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggt 225 |||||||||||||| || ||||| |||||||| ||||| ||||| |||||||| || | | Sbjct: 93 aaggagctgaaggatctccagaaagaccctccaacctcctgcagtgcaggtccagttgct 152 Query: 226 gaggacatgttccactggca 245 || |||||||| || ||||| Sbjct: 153 gaagacatgtttcattggca 172
>emb|BX832305.1|CNS0A1WR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH64ZD08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 650 Score = 77.8 bits (39), Expect = 3e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 358 aaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaa 417 |||||||| ||||| || |||||||||||||| |||||||||||||||||| | || ||| Sbjct: 264 aaggtgtttcaccctaatatcaacagcaacggaagcatttgccttgacattttgaaagaa 323 Query: 418 cagtggagccc 428 || |||||||| Sbjct: 324 caatggagccc 334 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 166 aaggagctgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggt 225 |||||||||||||| || ||||| |||||||| ||||| ||||| |||||||| || | | Sbjct: 72 aaggagctgaaggatctccagaaagaccctccaacctcctgcagtgcaggtccagttgct 131 Query: 226 gaggacatgttccactggca 245 || |||||||| || ||||| Sbjct: 132 gaagacatgtttcattggca 151
>gb|AF154650.1| Nicotiana tabacum clone PR35 mRNA sequence Length = 671 Score = 77.8 bits (39), Expect = 3e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 358 aaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaa 417 ||||| || ||||| |||||||||||||| || ||||||||||| |||||| | |||||| Sbjct: 241 aaggtttttcacccaaacatcaacagcaatggtagcatttgcctcgacattttgaaggaa 300 Query: 418 cagtggagccc 428 ||||||||||| Sbjct: 301 cagtggagccc 311
>dbj|AB005233.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBK23 Length = 79837 Score = 77.8 bits (39), Expect = 3e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 358 aaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaa 417 |||||||| ||||| || |||||||||||||| |||||||||||||||||| | || ||| Sbjct: 71752 aaggtgtttcaccctaatatcaacagcaacggaagcatttgccttgacattttgaaagaa 71811 Query: 418 cagtggagccc 428 || |||||||| Sbjct: 71812 caatggagccc 71822 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 166 aaggagctgaaggacctgcagaaggaccctcccacctcatgcagcgcaggt 216 |||||||||||||| || ||||| |||||||| ||||| ||||| |||||| Sbjct: 71048 aaggagctgaaggatctccagaaagaccctccaacctcctgcagtgcaggt 71098
>dbj|AK117378.1| Arabidopsis thaliana At5g41080 mRNA for unknown protein, complete cds, clone: RAFL16-95-M21 Length = 2157 Score = 77.8 bits (39), Expect = 3e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 358 aaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaa 417 |||||||| ||||| || |||||||||||||| |||||||||||||||||| | || ||| Sbjct: 280 aaggtgtttcaccctaatatcaacagcaacggaagcatttgccttgacattttgaaagaa 339 Query: 418 cagtggagccc 428 || |||||||| Sbjct: 340 caatggagccc 350 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 166 aaggagctgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggt 225 |||||||||||||| || ||||| |||||||| ||||| ||||| |||||||| || | | Sbjct: 88 aaggagctgaaggatctccagaaagaccctccaacctcctgcagtgcaggtccagttgct 147 Query: 226 gaggacatgttccactggca 245 || |||||||| || ||||| Sbjct: 148 gaagacatgtttcattggca 167
>gb|DQ027022.1| Arabidopsis thaliana ubiquitinating enzyme (At5g41700) mRNA, complete cds Length = 447 Score = 77.8 bits (39), Expect = 3e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 358 aaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaa 417 |||||||| ||||| || |||||||||||||| |||||||||||||||||| | || ||| Sbjct: 214 aaggtgtttcaccctaatatcaacagcaacggaagcatttgccttgacattttgaaagaa 273 Query: 418 cagtggagccc 428 || |||||||| Sbjct: 274 caatggagccc 284 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 166 aaggagctgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggt 225 |||||||||||||| || ||||| |||||||| ||||| ||||| |||||||| || | | Sbjct: 22 aaggagctgaaggatctccagaaagaccctccaacctcctgcagtgcaggtccagttgct 81 Query: 226 gaggacatgttccactggca 245 || |||||||| || ||||| Sbjct: 82 gaagacatgtttcattggca 101
>dbj|AP004929.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT06J16, TM0083, complete sequence Length = 120016 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 349 ttccgcaccaaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacatt 408 |||||||| ||||| |||||||| ||||| | || ||| || || ||||||||||||||| Sbjct: 111366 ttccgcacaaaggttttccaccccaacattagcaacaatggtagtatttgccttgacatt 111425 Query: 409 ctcaaggaacagtggagcccggc 431 ||||| || |||||||||||||| Sbjct: 111426 ctcaaagaccagtggagcccggc 111448
>gb|U15971.1|OSU15971 Oryza sativa ubiquitin conjugating enzyme (UBC) gene, complete cds Length = 2088 Score = 77.8 bits (39), Expect = 3e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 358 aaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaa 417 ||||| |||||||| ||||||||||| ||||| ||||| |||||||| || || |||||| Sbjct: 1489 aaggttttccacccaaacatcaacagtaacggaagcatctgccttgatatcctgaaggaa 1548 Query: 418 cagtggagccc 428 ||||||||||| Sbjct: 1549 cagtggagccc 1559
>gb|L00638.1|ATHUBCA Arabidopsis thaliana ubiquitin conjugating enzyme exons 2-4 Length = 1447 Score = 77.8 bits (39), Expect = 3e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 358 aaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaa 417 |||||||| ||||| || |||||||||||||| |||||||||||||||||| | || ||| Sbjct: 852 aaggtgtttcaccctaatatcaacagcaacggaagcatttgccttgacattttgaaagaa 911 Query: 418 cagtggagccc 428 || |||||||| Sbjct: 912 caatggagccc 922 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 166 aaggagctgaaggacctgcagaaggaccctcccacctcatgcagcgcaggt 216 |||||||||||||| || ||||| |||||||| ||||| ||||| |||||| Sbjct: 148 aaggagctgaaggatctccagaaagaccctccaacctcctgcagtgcaggt 198
>ref|NM_179131.1| Arabidopsis thaliana UBC9 (UBIQUITIN CONJUGATING ENZYME 9); ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT4G27960 (UBC9) transcript variant AT4G27960.1 mRNA, complete cds Length = 686 Score = 73.8 bits (37), Expect = 4e-10 Identities = 199/253 (78%) Strand = Plus / Plus Query: 173 tgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggtgaggaca 232 ||||||| ||||||||||| ||||| || ||||| |||||||| || || | || |||| Sbjct: 108 tgaaggatctgcagaaggatcctcctacttcatgtagcgcaggacccgttgcggaagaca 167 Query: 233 tgttccactggcaggccactatcatggggccctcggagagcccgttcaccggtggtctat 292 |||| || |||||||||||||| ||||| || ||||| ||||| | | || || | | Sbjct: 168 tgtttcattggcaggccactataatgggtccatcggatagcccttattctggaggagttt 227 Query: 293 ttttggtcaacattcatttcccaccggattaccccttcaagcccccgaaggtctctttcc 352 || | || | ||| |||||||| || |||||||| || ||||| || ||||| |||| Sbjct: 228 ttcttgtaaccatccatttccctccagattacccatttaagcctcctaaggtggctttta 287 Query: 353 gcaccaaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctca 412 | || ||||||||||| || ||||| |||||||| || ||||| ||||| ||||| | | Sbjct: 288 ggacgaaggtgttccatccaaacattaacagcaatggaagcatctgcctcgacatcttga 347 Query: 413 aggaacagtggag 425 |||| |||||||| Sbjct: 348 aggagcagtggag 360
>ref|NM_118934.1| Arabidopsis thaliana UBC9 (UBIQUITIN CONJUGATING ENZYME 9); ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT4G27960 (UBC9) transcript variant AT4G27960.2 mRNA, complete cds Length = 896 Score = 73.8 bits (37), Expect = 4e-10 Identities = 199/253 (78%) Strand = Plus / Plus Query: 173 tgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggtgaggaca 232 ||||||| ||||||||||| ||||| || ||||| |||||||| || || | || |||| Sbjct: 246 tgaaggatctgcagaaggatcctcctacttcatgtagcgcaggacccgttgcggaagaca 305 Query: 233 tgttccactggcaggccactatcatggggccctcggagagcccgttcaccggtggtctat 292 |||| || |||||||||||||| ||||| || ||||| ||||| | | || || | | Sbjct: 306 tgtttcattggcaggccactataatgggtccatcggatagcccttattctggaggagttt 365 Query: 293 ttttggtcaacattcatttcccaccggattaccccttcaagcccccgaaggtctctttcc 352 || | || | ||| |||||||| || |||||||| || ||||| || ||||| |||| Sbjct: 366 ttcttgtaaccatccatttccctccagattacccatttaagcctcctaaggtggctttta 425 Query: 353 gcaccaaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctca 412 | || ||||||||||| || ||||| |||||||| || ||||| ||||| ||||| | | Sbjct: 426 ggacgaaggtgttccatccaaacattaacagcaatggaagcatctgcctcgacatcttga 485 Query: 413 aggaacagtggag 425 |||| |||||||| Sbjct: 486 aggagcagtggag 498
>gb|AY142644.1| Arabidopsis thaliana E2 ubiquitin-conjugating enzyme 9 (UBC9) (At4g27960) mRNA, complete cds Length = 478 Score = 73.8 bits (37), Expect = 4e-10 Identities = 199/253 (78%) Strand = Plus / Plus Query: 173 tgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggtgaggaca 232 ||||||| ||||||||||| ||||| || ||||| |||||||| || || | || |||| Sbjct: 29 tgaaggatctgcagaaggatcctcctacttcatgtagcgcaggacccgttgcggaagaca 88 Query: 233 tgttccactggcaggccactatcatggggccctcggagagcccgttcaccggtggtctat 292 |||| || |||||||||||||| ||||| || ||||| ||||| | | || || | | Sbjct: 89 tgtttcattggcaggccactataatgggtccatcggatagcccttattctggaggagttt 148 Query: 293 ttttggtcaacattcatttcccaccggattaccccttcaagcccccgaaggtctctttcc 352 || | || | ||| |||||||| || |||||||| || ||||| || ||||| |||| Sbjct: 149 ttcttgtaaccatccatttccctccagattacccatttaagcctcctaaggtggctttta 208 Query: 353 gcaccaaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctca 412 | || ||||||||||| || ||||| |||||||| || ||||| ||||| ||||| | | Sbjct: 209 ggacgaaggtgttccatccaaacattaacagcaatggaagcatctgcctcgacatcttga 268 Query: 413 aggaacagtggag 425 |||| |||||||| Sbjct: 269 aggagcagtggag 281
>emb|Z14990.1|ATUBC9 A.thaliana UBC9 mRNA for ubiquitin conjugating enzyme homolog Length = 687 Score = 73.8 bits (37), Expect = 4e-10 Identities = 199/253 (78%) Strand = Plus / Plus Query: 173 tgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggtgaggaca 232 ||||||| ||||||||||| ||||| || ||||| |||||||| || || | || |||| Sbjct: 79 tgaaggatctgcagaaggatcctcctacttcatgtagcgcaggacccgttgcggaagaca 138 Query: 233 tgttccactggcaggccactatcatggggccctcggagagcccgttcaccggtggtctat 292 |||| || |||||||||||||| ||||| || ||||| ||||| | | || || | | Sbjct: 139 tgtttcattggcaggccactataatgggtccatcggatagcccttattctggaggagttt 198 Query: 293 ttttggtcaacattcatttcccaccggattaccccttcaagcccccgaaggtctctttcc 352 || | || | ||| |||||||| || |||||||| || ||||| || ||||| |||| Sbjct: 199 ttcttgtaaccatccatttccctccagattacccatttaagcctcctaaggtggctttta 258 Query: 353 gcaccaaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctca 412 | || ||||||||||| || ||||| |||||||| || ||||| ||||| ||||| | | Sbjct: 259 ggacgaaggtgttccatccaaacattaacagcaatggaagcatctgcctcgacatcttga 318 Query: 413 aggaacagtggag 425 |||| |||||||| Sbjct: 319 aggagcagtggag 331
>emb|X72626.1|ATUCEE2B A.thaliana UbcAT4b mRNA for ubiquitin conjugating enzyme E2 Length = 643 Score = 73.8 bits (37), Expect = 4e-10 Identities = 199/253 (78%) Strand = Plus / Plus Query: 173 tgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggtgaggaca 232 ||||||| ||||||||||| ||||| || ||||| |||||||| || || | || |||| Sbjct: 63 tgaaggatctgcagaaggatcctcctacttcatgtagcgcaggacccgttgcggaagaca 122 Query: 233 tgttccactggcaggccactatcatggggccctcggagagcccgttcaccggtggtctat 292 |||| || |||||||||||||| ||||| || ||||| ||||| | | || || | | Sbjct: 123 tgtttcattggcaggccactataatgggtccatcggatagcccttattctggaggagttt 182 Query: 293 ttttggtcaacattcatttcccaccggattaccccttcaagcccccgaaggtctctttcc 352 || | || | ||| |||||||| || |||||||| || ||||| || ||||| |||| Sbjct: 183 ttcttgtaaccatccatttccctccagattacccatttaagcctcctaaggtggctttta 242 Query: 353 gcaccaaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctca 412 | || ||||||||||| || ||||| |||||||| || ||||| ||||| ||||| | | Sbjct: 243 ggacgaaggtgttccatccaaacattaacagcaatggaagcatctgcctcgacatcttga 302 Query: 413 aggaacagtggag 425 |||| |||||||| Sbjct: 303 aggagcagtggag 315
>gb|AF325019.2|AF325019 Arabidopsis thaliana AT4g27960 (AT4g27960/T13J8_70) mRNA, complete cds Length = 896 Score = 73.8 bits (37), Expect = 4e-10 Identities = 199/253 (78%) Strand = Plus / Plus Query: 173 tgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggtgaggaca 232 ||||||| ||||||||||| ||||| || ||||| |||||||| || || | || |||| Sbjct: 246 tgaaggatctgcagaaggatcctcctacttcatgtagcgcaggacccgttgcggaagaca 305 Query: 233 tgttccactggcaggccactatcatggggccctcggagagcccgttcaccggtggtctat 292 |||| || |||||||||||||| ||||| || ||||| ||||| | | || || | | Sbjct: 306 tgtttcattggcaggccactataatgggtccatcggatagcccttattctggaggagttt 365 Query: 293 ttttggtcaacattcatttcccaccggattaccccttcaagcccccgaaggtctctttcc 352 || | || | ||| |||||||| || |||||||| || ||||| || ||||| |||| Sbjct: 366 ttcttgtaaccatccatttccctccagattacccatttaagcctcctaaggtggctttta 425 Query: 353 gcaccaaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctca 412 | || ||||||||||| || ||||| |||||||| || ||||| ||||| ||||| | | Sbjct: 426 ggacgaaggtgttccatccaaacattaacagcaatggaagcatctgcctcgacatcttga 485 Query: 413 aggaacagtggag 425 |||| |||||||| Sbjct: 486 aggagcagtggag 498
>emb|BX833149.1|CNS09Z3U Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL36ZD09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 707 Score = 73.8 bits (37), Expect = 4e-10 Identities = 157/197 (79%) Strand = Plus / Plus Query: 232 atgttccactggcaggccactatcatggggccctcggagagcccgttcaccggtggtcta 291 |||||||| ||||| || ||||||||||| || | || |||||||| |||| ||| | Sbjct: 156 atgttccaatggcaagcaactatcatgggtccagcagatagcccgtttgccggaggtgtg 215 Query: 292 tttttggtcaacattcatttcccaccggattaccccttcaagcccccgaaggtctctttc 351 ||| | || | |||| | |||||||| |||||||| |||||||| || ||||| | ||| Sbjct: 216 tttcttgttaccattaacttcccaccagattaccctttcaagccaccaaaggttgccttc 275 Query: 352 cgcaccaaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctc 411 || |||||||| | ||||| ||||||||||| || || || || || ||||||||||| Sbjct: 276 cggaccaaggtttatcacccaaacatcaacagtaatggaagtatctgtcttgacattctg 335 Query: 412 aaggaacagtggagccc 428 || || ||||||||||| Sbjct: 336 aaagagcagtggagccc 352
>gb|AY086109.1| Arabidopsis thaliana clone 21455 mRNA, complete sequence Length = 709 Score = 73.8 bits (37), Expect = 4e-10 Identities = 205/261 (78%) Strand = Plus / Plus Query: 144 catggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctc 203 |||||| || ||||||||| | |||||||| ||||| ||||||||||| ||||| | Sbjct: 103 catggcttctaagaggatcttgaaggagctcaaggatctgcagaaggatcctccttcaaa 162 Query: 204 atgcagcgcaggtcctgtaggtgaggacatgttccactggcaggccactatcatggggcc 263 |||||||| ||||| || | ||||||||||||||| ||||| || ||||||||||| || Sbjct: 163 ctgcagcgctggtccggtggctgaggacatgttccattggcaagcaactatcatgggacc 222 Query: 264 ctcggagagcccgttcaccggtggtctatttttggtcaacattcatttcccaccggatta 323 | || || |||| |||| || | |||||||| |||||||| || |||||||| Sbjct: 223 tcctgaaagtccgtatgccggaggagtgtttttggtttctattcattttcctccggatta 282 Query: 324 ccccttcaagcccccgaaggtctctttccgcaccaaggtgttccacccgaacatcaacag 383 || |||||||| || ||||| ||||| || ||||||| ||| || |||||||| || Sbjct: 283 tcctttcaagccaccaaaggtgtcttttaagactaaggtgtaccatccaaacatcaatag 342 Query: 384 caacggcagcatttgccttga 404 ||| || || ||||||||||| Sbjct: 343 caatggaagtatttgccttga 363
>dbj|AP003446.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1529_G03 Length = 100635 Score = 73.8 bits (37), Expect = 4e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 144 catggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctc 203 ||||||||| ||| ||||||||||||| || |||||||||||||| || ||||| || || Sbjct: 40304 catggcgtcgaagcggatcctcaaggaactaaaggacctgcagaaagatcctccaacatc 40363 Query: 204 atgcagcgcaggt 216 |||||| |||||| Sbjct: 40364 atgcagtgcaggt 40376 Score = 69.9 bits (35), Expect = 6e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 358 aaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaa 417 ||||| ||||| || |||||||| ||||| || ||||| ||||| |||||||| |||||| Sbjct: 41404 aaggtcttccatccaaacatcaatagcaatggaagcatatgcctcgacattcttaaggaa 41463 Query: 418 cagtggagccc 428 ||||||||||| Sbjct: 41464 cagtggagccc 41474 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 144 catggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctc 203 |||||| || ||| ||||||||||||| || |||||||||||||| || ||||| || || Sbjct: 61651 catggcatcgaagcggatcctcaaggaactaaaggacctgcagaaagatcctccaacatc 61710 Query: 204 atgcagcgcaggt 216 |||||| |||||| Sbjct: 61711 atgcagtgcaggt 61723 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 358 aaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaa 417 ||||| ||||| || |||||||| ||||| || ||||| |||||||||||||| ||||| Sbjct: 62896 aaggtcttccatccaaacatcaatagcaatggaagcatatgccttgacattcttaaggag 62955 Query: 418 cagtggagccc 428 || |||||||| Sbjct: 62956 caatggagccc 62966 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 304 attcatttcccaccggattaccccttcaagcccccgaaggt 344 ||||||||||| ||||| |||||||||||||| || ||||| Sbjct: 62366 attcatttccccccggactaccccttcaagcctccaaaggt 62406 Score = 44.1 bits (22), Expect = 0.37 Identities = 34/38 (89%) Strand = Plus / Plus Query: 295 ttggtcaacattcatttcccaccggattaccccttcaa 332 ||||| || ||||||||||| ||||| ||||||||||| Sbjct: 41055 ttggtgaatattcatttccccccggactaccccttcaa 41092
>gb|DQ027023.1| Arabidopsis thaliana ubiquitinating enzyme (At4g27960) mRNA, complete cds Length = 537 Score = 73.8 bits (37), Expect = 4e-10 Identities = 199/253 (78%) Strand = Plus / Plus Query: 173 tgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggtgaggaca 232 ||||||| ||||||||||| ||||| || ||||| |||||||| || || | || |||| Sbjct: 119 tgaaggatctgcagaaggatcctcctacttcatgtagcgcaggacccgttgcggaagaca 178 Query: 233 tgttccactggcaggccactatcatggggccctcggagagcccgttcaccggtggtctat 292 |||| || |||||||||||||| ||||| || ||||| ||||| | | || || | | Sbjct: 179 tgtttcattggcaggccactataatgggtccatcggatagcccttattctggaggagttt 238 Query: 293 ttttggtcaacattcatttcccaccggattaccccttcaagcccccgaaggtctctttcc 352 || | || | ||| |||||||| || |||||||| || ||||| || ||||| |||| Sbjct: 239 ttcttgtaaccatccatttccctccagattacccatttaagcctcctaaggtggctttta 298 Query: 353 gcaccaaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctca 412 | || ||||||||||| || ||||| |||||||| || ||||| ||||| ||||| | | Sbjct: 299 ggacgaaggtgttccatccaaacattaacagcaatggaagcatctgcctcgacatcttga 358 Query: 413 aggaacagtggag 425 |||| |||||||| Sbjct: 359 aggagcagtggag 371
>gb|L00639.1|ATHUBCB Arabidopsis thaliana ubiquitin conjugating enzyme mRNA, complete cds Length = 658 Score = 73.8 bits (37), Expect = 4e-10 Identities = 199/253 (78%) Strand = Plus / Plus Query: 173 tgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggtgaggaca 232 ||||||| ||||||||||| ||||| || ||||| |||||||| || || | || |||| Sbjct: 79 tgaaggatctgcagaaggatcctcctacttcatgtagcgcaggacccgttgcggaagaca 138 Query: 233 tgttccactggcaggccactatcatggggccctcggagagcccgttcaccggtggtctat 292 |||| || |||||||||||||| ||||| || ||||| ||||| | | || || | | Sbjct: 139 tgtttcattggcaggccactataatgggtccatcggatagcccttattctggaggagttt 198 Query: 293 ttttggtcaacattcatttcccaccggattaccccttcaagcccccgaaggtctctttcc 352 || | || | ||| |||||||| || |||||||| || ||||| || ||||| |||| Sbjct: 199 ttcttgtaaccatccatttccctccagattacccatttaagcctcctaaggtggctttta 258 Query: 353 gcaccaaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctca 412 | || ||||||||||| || ||||| |||||||| || ||||| ||||| ||||| | | Sbjct: 259 ggacgaaggtgttccatccaaacattaacagcaatggaagcatctgcctcgacatcttga 318 Query: 413 aggaacagtggag 425 |||| |||||||| Sbjct: 319 aggagcagtggag 331
>gb|AY082005.1| Gossypium hirsutum ubiquitin-conjugating enzyme E2 (UBC2) mRNA, complete cds Length = 850 Score = 71.9 bits (36), Expect = 2e-09 Identities = 192/244 (78%) Strand = Plus / Plus Query: 182 tgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggtgaggacatgttccact 241 |||| ||||| || ||||| || ||||| ||||| ||||||| ||| |||||||| || | Sbjct: 206 tgcaaaaggatccacccacttcttgcagtgcaggacctgtagctgaagacatgtttcatt 265 Query: 242 ggcaggccactatcatggggccctcggagagcccgttcaccggtggtctatttttggtca 301 |||| || || |||||||| || || || ||||| | | || ||| ||||||| || | Sbjct: 266 ggcaagcaacaatcatgggcccttccgatagcccttatgcgggaggtgtatttttagtta 325 Query: 302 acattcatttcccaccggattaccccttcaagcccccgaaggtctctttccgcaccaagg 361 |||||||| || || ||||| || ||||||||||| ||||| | || | ||||||| Sbjct: 326 gtattcattttcctccagattatcctttcaagccccctaaggttgcatttaggaccaagg 385 Query: 362 tgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaacagt 421 | ||||| || |||||||| ||||| || |||||||| ||||| || || || ||||||| Sbjct: 386 ttttccatccaaacatcaatagcaatgggagcatttgtcttgatatcctaaaagaacagt 445 Query: 422 ggag 425 |||| Sbjct: 446 ggag 449
>gb|AY082004.1| Gossypium hirsutum ubiquitin-conjugating enzyme E2 (UBC1) mRNA, complete cds Length = 773 Score = 71.9 bits (36), Expect = 2e-09 Identities = 192/244 (78%) Strand = Plus / Plus Query: 182 tgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggtgaggacatgttccact 241 |||| ||||| || ||||| || ||||| ||||||||||||| ||| |||||||| || | Sbjct: 227 tgcaaaaggatccacccacttcttgcagtgcaggtcctgtagctgaagacatgtttcatt 286 Query: 242 ggcaggccactatcatggggccctcggagagcccgttcaccggtggtctatttttggtca 301 |||| || || ||||||| || || || ||||| | | || ||| ||||||| || | Sbjct: 287 ggcaagcaacactcatgggcccttccgatagcccttatgcgggaggtgtatttttagtta 346 Query: 302 acattcatttcccaccggattaccccttcaagcccccgaaggtctctttccgcaccaagg 361 |||||||| || || ||||| || ||||||||||| ||||| | || | ||||||| Sbjct: 347 gtattcattttcctccagattatcctttcaagccccctaaggttgcatttaggaccaagg 406 Query: 362 tgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaacagt 421 | ||||| || |||||||| ||||| || |||||||| ||||| || || || ||||||| Sbjct: 407 ttttccatccaaacatcaatagcaatgggagcatttgtcttgatatcctaaaagaacagt 466 Query: 422 ggag 425 |||| Sbjct: 467 ggag 470
>gb|AY702915.1|AY702915S1 Pisum sativum ubiquitin conjugating enzyme E2 mRNA, partial cds Length = 236 Score = 69.9 bits (35), Expect = 6e-09 Identities = 86/103 (83%) Strand = Plus / Plus Query: 143 ccatggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacct 202 ||||||| |||||| | |||||||||||||| |||||| ||||||| || || || || | Sbjct: 52 ccatggcttccaagcgcatcctcaaggagctcaaggacttgcagaaagatccacctacgt 111 Query: 203 catgcagcgcaggtcctgtaggtgaggacatgttccactggca 245 | |||||||||||||| || | || ||||||||||| ||||| Sbjct: 112 cctgcagcgcaggtccggttgccgaagacatgttccattggca 154
>gb|AY683451.1| Lemna minor ubiquitin conjugating enzyme E2 mRNA, partial cds Length = 178 Score = 69.9 bits (35), Expect = 6e-09 Identities = 86/103 (83%) Strand = Plus / Plus Query: 143 ccatggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacct 202 ||||||| |||||| | |||||||||||||| |||||| ||||||| || || || || | Sbjct: 33 ccatggcttccaagcgcatcctcaaggagctcaaggacttgcagaaagatccacctacgt 92 Query: 203 catgcagcgcaggtcctgtaggtgaggacatgttccactggca 245 | |||||||||||||| || | || ||||||||||| ||||| Sbjct: 93 cctgcagcgcaggtccggttgccgaagacatgttccattggca 135
>gb|AY080741.1| Arabidopsis thaliana putative E2, ubiquitin-conjugating enzyme UBC9 (At4g27960) mRNA, complete cds Length = 688 Score = 69.9 bits (35), Expect = 6e-09 Identities = 86/103 (83%) Strand = Plus / Plus Query: 173 tgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggtgaggaca 232 ||||||| ||||||||||| ||||| || ||||| |||||||| || || | || |||| Sbjct: 105 tgaaggatctgcagaaggatcctcctacttcatgtagcgcaggacccgttgcggaagaca 164 Query: 233 tgttccactggcaggccactatcatggggccctcggagagccc 275 |||| || |||||||||||||| ||||| || ||||| ||||| Sbjct: 165 tgtttcattggcaggccactataatgggtccatcggatagccc 207 Score = 48.1 bits (24), Expect = 0.024 Identities = 57/68 (83%) Strand = Plus / Plus Query: 358 aaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaa 417 ||||||||||| || ||||| |||||||| || ||||| ||||| ||||| | ||||| Sbjct: 290 aaggtgttccatccaaacattaacagcaatggaagcatctgcctcgacatcttgaaggag 349 Query: 418 cagtggag 425 |||||||| Sbjct: 350 cagtggag 357
>gb|DQ118119.1|DQ118119S1 Lupinus albus ubiquitin conjugating enzyme E2 mRNA, partial cds Length = 178 Score = 69.9 bits (35), Expect = 6e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 151 tccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctcatgcagc 210 |||||| |||||||||||||||| ||||| ||||||| |||||||| || || ||||| Sbjct: 1 tccaagcggatcctcaaggagctcaaggatttgcagaaagaccctcctacatcttgcagt 60 Query: 211 gcaggtcctgtaggtgaggacatgttccactggca 245 |||||||| || | ||| |||||||| || ||||| Sbjct: 61 gcaggtccggtcgctgaagacatgtttcattggca 95
>dbj|AB013388.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K19E1 Length = 73428 Score = 69.9 bits (35), Expect = 6e-09 Identities = 62/71 (87%) Strand = Plus / Minus Query: 355 accaaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaag 414 |||||||||||||| || ||||| ||||||||||| ||||||||||| ||||| | ||| Sbjct: 47495 accaaggtgttccatcccaacattaacagcaacggtagcatttgcctcgacatcttgaag 47436 Query: 415 gaacagtggag 425 || |||||||| Sbjct: 47435 gagcagtggag 47425 Score = 44.1 bits (22), Expect = 0.37 Identities = 34/38 (89%) Strand = Plus / Minus Query: 307 catttcccaccggattaccccttcaagcccccgaaggt 344 |||||||| ||||||||||| |||||||| || ||||| Sbjct: 47659 catttccctccggattacccattcaagcctcctaaggt 47622 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 212 caggtcctgtaggtgaggacatgttccactggcaggc 248 |||||||||| | ||| |||||||| ||||||||||| Sbjct: 47754 caggtcctgttgctgaagacatgtttcactggcaggc 47718
>emb|Z14993.1|ATUBC12 A.thaliana UBC12 gene Length = 1010 Score = 69.9 bits (35), Expect = 6e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 355 accaaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaag 414 |||||||||||||| || ||||| ||||||||||| ||||||||||| ||||| | ||| Sbjct: 685 accaaggtgttccatcccaacattaacagcaacggtagcatttgcctcgacatcttgaag 744 Query: 415 gaacagtggag 425 || |||||||| Sbjct: 745 gagcagtggag 755 Score = 44.1 bits (22), Expect = 0.37 Identities = 34/38 (89%) Strand = Plus / Plus Query: 307 catttcccaccggattaccccttcaagcccccgaaggt 344 |||||||| ||||||||||| |||||||| || ||||| Sbjct: 521 catttccctccggattacccattcaagcctcctaaggt 558 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 212 caggtcctgtaggtgaggacatgttccactggcaggc 248 |||||||||| | ||| |||||||| ||||||||||| Sbjct: 426 caggtcctgttgctgaagacatgtttcactggcaggc 462
>dbj|AK065902.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047C20, full insert sequence Length = 896 Score = 69.9 bits (35), Expect = 6e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 358 aaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaa 417 ||||||| ||||| ||||||||| ||| || ||||||||||||||||| |||||||| Sbjct: 376 aaggtgtatcacccaaacatcaactccaatggaagcatttgccttgacatcctcaaggag 435 Query: 418 cagtggagccc 428 ||||||||||| Sbjct: 436 cagtggagccc 446
>dbj|AK059627.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-H11, full insert sequence Length = 899 Score = 69.9 bits (35), Expect = 6e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 358 aaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaa 417 ||||||| ||||| ||||||||| ||| || ||||||||||||||||| |||||||| Sbjct: 368 aaggtgtatcacccaaacatcaactccaatggaagcatttgccttgacatcctcaaggag 427 Query: 418 cagtggagccc 428 ||||||||||| Sbjct: 428 cagtggagccc 438
>gb|L29077.1|PEAUBC4 Pisum sativum ubiquitin conjugating enzyme (UBC4), complete cds Length = 909 Score = 69.9 bits (35), Expect = 6e-09 Identities = 86/103 (83%) Strand = Plus / Plus Query: 143 ccatggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacct 202 ||||||| |||||| | |||||||||||||| |||||| ||||||| || || || || | Sbjct: 170 ccatggcttccaagcgcatcctcaaggagctcaaggacttgcagaaagatccacctacgt 229 Query: 203 catgcagcgcaggtcctgtaggtgaggacatgttccactggca 245 | |||||||||||||| || | || ||||||||||| ||||| Sbjct: 230 cctgcagcgcaggtccggttgccgaagacatgttccattggca 272 Score = 58.0 bits (29), Expect = 2e-05 Identities = 110/137 (80%) Strand = Plus / Plus Query: 292 tttttggtcaacattcatttcccaccggattaccccttcaagcccccgaaggtctctttc 351 |||||||| | ||||||||| || || ||||| || |||||||| || ||||| | ||| Sbjct: 319 tttttggttaccattcattttcctccagattatcctttcaagcctcctaaggttgcattc 378 Query: 352 cgcaccaaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctc 411 | || ||||| || || ||||||||||| |||||||| || ||||| ||||| || || Sbjct: 379 aggactaaggtctttcatccgaacatcaatagcaacgggagtatttgtcttgatatcctg 438 Query: 412 aaggaacagtggagccc 428 ||||| || |||||||| Sbjct: 439 aaggagcaatggagccc 455
>gb|L00642.1|ATHUBCE Arabidopsis thaliana ubiquitin conjugating enzyme gene, exons 1-4 Length = 1010 Score = 69.9 bits (35), Expect = 6e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 355 accaaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaag 414 |||||||||||||| || ||||| ||||||||||| ||||||||||| ||||| | ||| Sbjct: 685 accaaggtgttccatcccaacattaacagcaacggtagcatttgcctcgacatcttgaag 744 Query: 415 gaacagtggag 425 || |||||||| Sbjct: 745 gagcagtggag 755 Score = 44.1 bits (22), Expect = 0.37 Identities = 34/38 (89%) Strand = Plus / Plus Query: 307 catttcccaccggattaccccttcaagcccccgaaggt 344 |||||||| ||||||||||| |||||||| || ||||| Sbjct: 521 catttccctccggattacccattcaagcctcctaaggt 558 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 212 caggtcctgtaggtgaggacatgttccactggcaggc 248 |||||||||| | ||| |||||||| ||||||||||| Sbjct: 426 caggtcctgttgctgaagacatgtttcactggcaggc 462
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 67.9 bits (34), Expect = 3e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 366 ccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaacagtgg 423 |||||||||||| |||| ||||||| |||| |||||||| ||||||||||| |||||| Sbjct: 573172 ccacccgaacataaacaacaacggcggcatctgccttgatattctcaaggaccagtgg 573229
>ref|XM_838144.1| Leishmania major strain Friedlin ubiquitin-conjugating enzyme E2 (LMJ_1061) partial mRNA Length = 447 Score = 67.9 bits (34), Expect = 3e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 366 ccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaacagtgg 423 |||||||||||| |||| ||||||| |||| |||||||| ||||||||||| |||||| Sbjct: 225 ccacccgaacataaacaacaacggcggcatctgccttgatattctcaaggaccagtgg 282
>emb|AL445678.2|LMFL7845 Leishmania major Friedlin chromosome 35 cosmid L7845 Length = 29811 Score = 67.9 bits (34), Expect = 3e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 366 ccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaacagtgg 423 |||||||||||| |||| ||||||| |||| |||||||| ||||||||||| |||||| Sbjct: 18065 ccacccgaacataaacaacaacggcggcatctgccttgatattctcaaggaccagtgg 18008
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 367 cacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaacagtggagc 426 ||||| ||||||||| ||| || ||||||||||||||||| |||||||| ||||||||| Sbjct: 6896203 cacccaaacatcaactccaatggaagcatttgccttgacatcctcaaggagcagtggagc 6896262 Query: 427 cc 428 || Sbjct: 6896263 cc 6896264
>dbj|AP006156.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1043F11 Length = 167137 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 367 cacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaacagtggagc 426 ||||| ||||||||| ||| || ||||||||||||||||| |||||||| ||||||||| Sbjct: 124098 cacccaaacatcaactccaatggaagcatttgccttgacatcctcaaggagcagtggagc 124157 Query: 427 cc 428 || Sbjct: 124158 cc 124159
>ref|XM_370047.1| Magnaporthe grisea 70-15 hypothetical protein (MG06562.4) partial mRNA Length = 465 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 366 ccacccgaacatcaacagcaacggcagcatttgccttgacattct 410 ||||||||| |||||||||||||||||||| ||||| |||||||| Sbjct: 243 ccacccgaatatcaacagcaacggcagcatctgcctcgacattct 287 Score = 48.1 bits (24), Expect = 0.024 Identities = 24/24 (100%) Strand = Plus / Plus Query: 322 taccccttcaagcccccgaaggtc 345 |||||||||||||||||||||||| Sbjct: 199 taccccttcaagcccccgaaggtc 222 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 233 tgttccactggcaggccactatcatggg 260 ||||||||||||| || ||||||||||| Sbjct: 110 tgttccactggcaagcaactatcatggg 137
>gb|AF161722.1|AF161722 Magnaporthe grisea ubiquitin-conjugating protein (Ubc1) gene, complete cds Length = 2239 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 366 ccacccgaacatcaacagcaacggcagcatttgccttgacattct 410 ||||||||| |||||||||||||||||||| ||||| |||||||| Sbjct: 1022 ccacccgaatatcaacagcaacggcagcatctgcctcgacattct 1066 Score = 48.1 bits (24), Expect = 0.024 Identities = 24/24 (100%) Strand = Plus / Plus Query: 322 taccccttcaagcccccgaaggtc 345 |||||||||||||||||||||||| Sbjct: 978 taccccttcaagcccccgaaggtc 1001
>emb|AJ718239.1| Nicotiana tabacum cDNA-AFLP-fragment BSTT4-11-240, cultivar Bright Yellow 2 Length = 223 Score = 65.9 bits (33), Expect = 1e-07 Identities = 87/105 (82%) Strand = Plus / Plus Query: 304 attcatttcccaccggattaccccttcaagcccccgaaggtctctttccgcaccaaggtg 363 |||||||| || || ||||| || |||||||| || ||||| ||||| | || || || Sbjct: 119 attcattttcctcccgattatccattcaagccacctaaggtagctttcaggacaaaagtt 178 Query: 364 ttccacccgaacatcaacagcaacggcagcatttgccttgacatt 408 |||||||| ||||| ||||||||||| ||||| |||||||||||| Sbjct: 179 ttccacccaaacataaacagcaacgggagcatatgccttgacatt 223
>gb|AY491500.1| Capsicum annuum ubiquitin-conjugating enzyme E2 mRNA, complete cds Length = 779 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 166 aaggagctgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggt 225 ||||| || |||||||| ||||| || ||||| ||||| ||||| |||||||| || || Sbjct: 67 aaggaactcaaggacctccagaaagatcctcctacctcttgcagtgcaggtcccgtcgga 126 Query: 226 gaggacatgttccactggca 245 ||||||||||| |||||||| Sbjct: 127 gaggacatgtttcactggca 146
>ref|NM_001036151.1| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT1G64230 transcript variant AT1G64230.2 mRNA, complete cds Length = 885 Score = 61.9 bits (31), Expect = 2e-06 Identities = 100/123 (81%) Strand = Plus / Plus Query: 303 cattcatttcccaccggattaccccttcaagcccccgaaggtctctttccgcaccaaggt 362 |||||| ||||| |||||||| || ||||| || || ||||| | ||| | || || || Sbjct: 281 cattcacttccctccggattatcctttcaaaccaccaaaggttgcattcaggacaaaagt 340 Query: 363 gttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaacagtg 422 ||||||||| || |||||||||| || |||||||||||||||||| | || ||||| || Sbjct: 341 gttccaccctaatgtcaacagcaatggaagcatttgccttgacattttgaaagaacaatg 400 Query: 423 gag 425 ||| Sbjct: 401 gag 403
>ref|NM_105097.3| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT1G64230 transcript variant AT1G64230.1 mRNA, complete cds Length = 846 Score = 61.9 bits (31), Expect = 2e-06 Identities = 100/123 (81%) Strand = Plus / Plus Query: 303 cattcatttcccaccggattaccccttcaagcccccgaaggtctctttccgcaccaaggt 362 |||||| ||||| |||||||| || ||||| || || ||||| | ||| | || || || Sbjct: 293 cattcacttccctccggattatcctttcaaaccaccaaaggttgcattcaggacaaaagt 352 Query: 363 gttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaacagtg 422 ||||||||| || |||||||||| || |||||||||||||||||| | || ||||| || Sbjct: 353 gttccaccctaatgtcaacagcaatggaagcatttgccttgacattttgaaagaacaatg 412 Query: 423 gag 425 ||| Sbjct: 413 gag 415
>gb|AY133670.1| Arabidopsis thaliana At1g64230/F22C12_17 mRNA, complete cds Length = 447 Score = 61.9 bits (31), Expect = 2e-06 Identities = 100/123 (81%) Strand = Plus / Plus Query: 303 cattcatttcccaccggattaccccttcaagcccccgaaggtctctttccgcaccaaggt 362 |||||| ||||| |||||||| || ||||| || || ||||| | ||| | || || || Sbjct: 159 cattcacttccctccggattatcctttcaaaccaccaaaggttgcattcaggacaaaagt 218 Query: 363 gttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaacagtg 422 ||||||||| || |||||||||| || |||||||||||||||||| | || ||||| || Sbjct: 219 gttccaccctaatgtcaacagcaatggaagcatttgccttgacattttgaaagaacaatg 278 Query: 423 gag 425 ||| Sbjct: 279 gag 281
>gb|AF385718.1|AF385718 Arabidopsis thaliana At1g64230/F22C12_17 mRNA, complete cds Length = 738 Score = 61.9 bits (31), Expect = 2e-06 Identities = 100/123 (81%) Strand = Plus / Plus Query: 303 cattcatttcccaccggattaccccttcaagcccccgaaggtctctttccgcaccaaggt 362 |||||| ||||| |||||||| || ||||| || || ||||| | ||| | || || || Sbjct: 285 cattcacttccctccggattatcctttcaaaccaccaaaggttgcattcaggacaaaagt 344 Query: 363 gttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaacagtg 422 ||||||||| || |||||||||| || |||||||||||||||||| | || ||||| || Sbjct: 345 gttccaccctaatgtcaacagcaatggaagcatttgccttgacattttgaaagaacaatg 404 Query: 423 gag 425 ||| Sbjct: 405 gag 407
>emb|BX815683.1|CNS0ABHQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS83ZF06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 776 Score = 61.9 bits (31), Expect = 2e-06 Identities = 100/123 (81%) Strand = Plus / Plus Query: 303 cattcatttcccaccggattaccccttcaagcccccgaaggtctctttccgcaccaaggt 362 |||||| ||||| |||||||| || ||||| || || ||||| | ||| | || || || Sbjct: 263 cattcacttccctccggattatcctttcaaaccaccaaaggttgcattcaggacaaaagt 322 Query: 363 gttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaacagtg 422 ||||||||| || |||||||||| || |||||||||||||||||| | || ||||| || Sbjct: 323 gttccaccctaatgtcaacagcaatggaagcatttgccttgacattttgaaagaacaatg 382 Query: 423 gag 425 ||| Sbjct: 383 gag 385
>emb|BX816699.1|CNS0ABXP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH63ZG10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 782 Score = 61.9 bits (31), Expect = 2e-06 Identities = 100/123 (81%) Strand = Plus / Plus Query: 303 cattcatttcccaccggattaccccttcaagcccccgaaggtctctttccgcaccaaggt 362 |||||| ||||| |||||||| || ||||| || || ||||| | ||| | || || || Sbjct: 292 cattcacttccctccggattatcctttcaaaccaccaaaggttgcattcaggacaaaagt 351 Query: 363 gttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaacagtg 422 ||||||||| || |||||||||| || |||||||||||||||||| | || ||||| || Sbjct: 352 gttccaccctaatgtcaacagcaatggaagcatttgccttgacattttgaaagaacaatg 411 Query: 423 gag 425 ||| Sbjct: 412 gag 414
>dbj|AB125882.1| Ipomoea batatas SRF3 mRNA for ubiquitin-conjugating enzyme-like protein Length = 979 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 166 aaggagctgaaggacctgcagaaggaccctcccacctcatgcagcgc 212 |||||||| ||||| |||||||||||||||||||| | ||||||||| Sbjct: 591 aaggagctcaaggatctgcagaaggaccctcccacattatgcagcgc 637
>gb|DQ027041.1| Arabidopsis thaliana ubiquitinating enzyme (At1g64230) mRNA, complete cds Length = 447 Score = 61.9 bits (31), Expect = 2e-06 Identities = 100/123 (81%) Strand = Plus / Plus Query: 303 cattcatttcccaccggattaccccttcaagcccccgaaggtctctttccgcaccaaggt 362 |||||| ||||| |||||||| || ||||| || || ||||| | ||| | || || || Sbjct: 159 cattcacttccctccggattatcctttcaaaccaccaaaggttgcattcaggacaaaagt 218 Query: 363 gttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaacagtg 422 ||||||||| || |||||||||| || |||||||||||||||||| | || ||||| || Sbjct: 219 gttccaccctaatgtcaacagcaatggaagcatttgccttgacattttgaaagaacaatg 278 Query: 423 gag 425 ||| Sbjct: 279 gag 281
>ref|NM_111704.1| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT3G08700 mRNA, complete cds Length = 450 Score = 60.0 bits (30), Expect = 6e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 358 aaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacat 407 ||||||| |||||| |||||| ||||||| || ||||||||||||||||| Sbjct: 217 aaggtgtaccacccaaacatcgacagcaaaggaagcatttgccttgacat 266
>ref|XM_519070.1| PREDICTED: Pan troglodytes similar to ubiquitin-conjugating enzyme HBUCE1 (LOC463379), mRNA Length = 614 Score = 60.0 bits (30), Expect = 6e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 211 gcaggtcctgtaggtgaggacatgttccactggcaggccactatcatggg 260 ||||| ||||| ||||| ||| ||||||||||||||||||| |||||||| Sbjct: 82 gcaggacctgtcggtgatgacttgttccactggcaggccaccatcatggg 131
>emb|CR608137.1| full-length cDNA clone CS0DI034YG18 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1379 Score = 60.0 bits (30), Expect = 6e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 211 gcaggtcctgtaggtgaggacatgttccactggcaggccactatcatggg 260 ||||| ||||| ||||| ||| ||||||||||||||||||| |||||||| Sbjct: 128 gcaggacctgtcggtgatgacttgttccactggcaggccaccatcatggg 177 Score = 44.1 bits (22), Expect = 0.37 Identities = 34/38 (89%) Strand = Plus / Plus Query: 367 cacccgaacatcaacagcaacggcagcatttgccttga 404 ||||| || ||||||||||| |||||||| |||||||| Sbjct: 284 caccctaatatcaacagcaatggcagcatctgccttga 321
>dbj|AK001446.1| Homo sapiens cDNA FLJ10584 fis, clone NT2RP2003737, highly similar to UBIQUITIN-CONJUGATING ENZYME E2-17 KD 2 (EC 6.3.2.19) Length = 1398 Score = 60.0 bits (30), Expect = 6e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 211 gcaggtcctgtaggtgaggacatgttccactggcaggccactatcatggg 260 ||||| ||||| ||||| ||| ||||||||||||||||||| |||||||| Sbjct: 152 gcaggacctgtcggtgatgacttgttccactggcaggccaccatcatggg 201 Score = 44.1 bits (22), Expect = 0.37 Identities = 34/38 (89%) Strand = Plus / Plus Query: 367 cacccgaacatcaacagcaacggcagcatttgccttga 404 ||||| || ||||||||||| |||||||| |||||||| Sbjct: 308 caccctaatatcaacagcaatggcagcatctgccttga 345
>gb|BT024821.1| Arabidopsis thaliana At3g08700 gene, complete cds Length = 450 Score = 60.0 bits (30), Expect = 6e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 358 aaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacat 407 ||||||| |||||| |||||| ||||||| || ||||||||||||||||| Sbjct: 217 aaggtgtaccacccaaacatcgacagcaaaggaagcatttgccttgacat 266
>gb|AC012562.5|AC012562 Arabidopsis thaliana chromosome 3 BAC F17O14 genomic sequence, complete sequence Length = 90721 Score = 60.0 bits (30), Expect = 6e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 358 aaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacat 407 ||||||| |||||| |||||| ||||||| || ||||||||||||||||| Sbjct: 55121 aaggtgtaccacccaaacatcgacagcaaaggaagcatttgccttgacat 55170 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 225 tgaggacatgttccactggcaggccactatcatggg 260 ||||||||||||||| ||||| |||||||||||||| Sbjct: 52858 tgaggacatgttccattggcaagccactatcatggg 52893 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 144 catggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcc 197 |||||| || ||||||||| | |||||||| ||||| ||||||||||| ||||| Sbjct: 52409 catggcttctaagaggatcttgaaggagctcaaggatctgcagaaggatcctcc 52462
>gb|BC004104.2| Homo sapiens ubiquitin-conjugating enzyme E2D 4 (putative), mRNA (cDNA clone MGC:10513 IMAGE:3835609), complete cds Length = 1415 Score = 60.0 bits (30), Expect = 6e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 211 gcaggtcctgtaggtgaggacatgttccactggcaggccactatcatggg 260 ||||| ||||| ||||| ||| ||||||||||||||||||| |||||||| Sbjct: 156 gcaggacctgtcggtgatgacttgttccactggcaggccaccatcatggg 205 Score = 44.1 bits (22), Expect = 0.37 Identities = 34/38 (89%) Strand = Plus / Plus Query: 367 cacccgaacatcaacagcaacggcagcatttgccttga 404 ||||| || ||||||||||| |||||||| |||||||| Sbjct: 312 caccctaatatcaacagcaatggcagcatctgccttga 349
>gb|AF125044.1|AF125044 Homo sapiens ubiquitin-conjugating enzyme HBUCE1 mRNA, complete cds Length = 1471 Score = 60.0 bits (30), Expect = 6e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 211 gcaggtcctgtaggtgaggacatgttccactggcaggccactatcatggg 260 ||||| ||||| ||||| ||| ||||||||||||||||||| |||||||| Sbjct: 203 gcaggacctgtcggtgatgacttgttccactggcaggccaccatcatggg 252 Score = 44.1 bits (22), Expect = 0.37 Identities = 34/38 (89%) Strand = Plus / Plus Query: 367 cacccgaacatcaacagcaacggcagcatttgccttga 404 ||||| || ||||||||||| |||||||| |||||||| Sbjct: 359 caccctaatatcaacagcaatggcagcatctgccttga 396
>ref|NM_015983.2| Homo sapiens ubiquitin-conjugating enzyme E2D 4 (putative) (UBE2D4), mRNA Length = 1398 Score = 60.0 bits (30), Expect = 6e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 211 gcaggtcctgtaggtgaggacatgttccactggcaggccactatcatggg 260 ||||| ||||| ||||| ||| ||||||||||||||||||| |||||||| Sbjct: 152 gcaggacctgtcggtgatgacttgttccactggcaggccaccatcatggg 201 Score = 44.1 bits (22), Expect = 0.37 Identities = 34/38 (89%) Strand = Plus / Plus Query: 367 cacccgaacatcaacagcaacggcagcatttgccttga 404 ||||| || ||||||||||| |||||||| |||||||| Sbjct: 308 caccctaatatcaacagcaatggcagcatctgccttga 345
>gb|DQ027026.1| Arabidopsis thaliana ubiquitinating enzyme (At3g08700) mRNA, complete cds Length = 450 Score = 60.0 bits (30), Expect = 6e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 358 aaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacat 407 ||||||| |||||| |||||| ||||||| || ||||||||||||||||| Sbjct: 217 aaggtgtaccacccaaacatcgacagcaaaggaagcatttgccttgacat 266
>gb|AC148404.7| Medicago truncatula clone mth2-28d4, complete sequence Length = 111252 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 361 gtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaacag 420 ||||||||||| |||||||||||||| || || || || || |||||||| || |||||| Sbjct: 91928 gtgttccaccctaacatcaacagcaatgggagtatctgtctcgacattctgaaagaacag 91987 Query: 421 tggag 425 ||||| Sbjct: 91988 tggag 91992 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 166 aaggagctgaaggacctgcagaaggaccctcc 197 |||||| |||||||||||||||| |||||||| Sbjct: 90193 aaggagttgaaggacctgcagaaagaccctcc 90224
>emb|Z14992.1|ATUBC11 A.thaliana UBC11 mRNA for ubiquitin conjugating enzyme homolog Length = 543 Score = 58.0 bits (29), Expect = 2e-05 Identities = 83/101 (82%) Strand = Plus / Plus Query: 304 attcatttcccaccggattaccccttcaagcccccgaaggtctctttccgcaccaaggtg 363 ||||||||||| |||||||| || |||||||| || ||||| ||||| || |||||| Sbjct: 70 attcatttccctccggattatcctttcaagccaccaaaggtgtcttttaagactaaggtg 129 Query: 364 ttccacccgaacatcaacagcaacggcagcatttgccttga 404 | ||| || |||||||| ||||| || || ||||||||||| Sbjct: 130 taccatccaaacatcaatagcaatggaagtatttgccttga 170
>gb|AF480945.1| Arabidopsis thaliana ubiquitin conjugating enzyme UBC9A (UBC9A) mRNA, complete cds Length = 723 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 361 gtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaacag 420 ||||||||||| || |||||||||| || |||||||||||||||||| | || ||||| Sbjct: 304 gtgttccaccctaatgtcaacagcaatggaagcatttgccttgacattttgaaagaacaa 363 Query: 421 tggag 425 ||||| Sbjct: 364 tggag 368
>emb|BX815644.1|CNS0ABEX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS7ZD08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1496 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 361 gtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaacag 420 ||||||||||| || |||||||||| || |||||||||||||||||| | || ||||| Sbjct: 1121 gtgttccaccctaatgtcaacagcaatggaagcatttgccttgacattttgaaagaacaa 1180 Query: 421 tggag 425 ||||| Sbjct: 1181 tggag 1185
>emb|BX816916.1|CNS0ABT7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH76ZE04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 467 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 361 gtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaacag 420 ||||||||||| || |||||||||| || |||||||||||||||||| | || ||||| Sbjct: 51 gtgttccaccctaatgtcaacagcaatggaagcatttgccttgacattttgaaagaacaa 110 Query: 421 tggag 425 ||||| Sbjct: 111 tggag 115
>gb|AC007764.2|AC007764 Genomic sequence for Arabidopsis thaliana BAC F22C12 from chromosome I, complete sequence Length = 111222 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 361 gtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaacag 420 ||||||||||| || |||||||||| || |||||||||||||||||| | || ||||| Sbjct: 15990 gtgttccaccctaatgtcaacagcaatggaagcatttgccttgacattttgaaagaacaa 15931 Query: 421 tggag 425 ||||| Sbjct: 15930 tggag 15926
>gb|L00641.1|ATHUBCD Arabidopsis thaliana ubiquitin conjugating enzyme mRNA, 3' end Length = 543 Score = 58.0 bits (29), Expect = 2e-05 Identities = 83/101 (82%) Strand = Plus / Plus Query: 304 attcatttcccaccggattaccccttcaagcccccgaaggtctctttccgcaccaaggtg 363 ||||||||||| |||||||| || |||||||| || ||||| ||||| || |||||| Sbjct: 70 attcatttccctccggattatcctttcaagccaccaaaggtgtcttttaagactaaggtg 129 Query: 364 ttccacccgaacatcaacagcaacggcagcatttgccttga 404 | ||| || |||||||| ||||| || || ||||||||||| Sbjct: 130 taccatccaaacatcaatagcaatggaagtatttgccttga 170
>gb|AY105836.1| Zea mays PCO130472 mRNA sequence Length = 915 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 181 ctgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggtgaggacatgttccac 240 ||||| |||||||| || || |||||||| ||||| |||| || ||||| | |||||| Sbjct: 249 ctgcaaaaggacccaccgacatcatgcagtgcagggcctgctggagaggatctattccac 308 Query: 241 tggcaggccactatcatggg 260 ||||||||||| |||||||| Sbjct: 309 tggcaggccacaatcatggg 328 Score = 44.1 bits (22), Expect = 0.37 Identities = 34/38 (89%) Strand = Plus / Plus Query: 391 agcatttgccttgacattctcaaggaacagtggagccc 428 |||||||||||||| || |||||||| || |||||||| Sbjct: 459 agcatttgccttgatatcctcaaggagcaatggagccc 496
>gb|AC107772.19| Mus musculus chromosome 15, clone RP23-102L5, complete sequence Length = 194704 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 210 cgcaggtcctgtaggtgaggacatgttccactggcaggccactatcatggg 260 |||||| ||||| ||||| ||| ||||||||||||||||||| ||| |||| Sbjct: 158227 cgcaggacctgtgggtgatgacttgttccactggcaggccaccatcctggg 158177 Score = 40.1 bits (20), Expect = 5.8 Identities = 35/40 (87%) Strand = Plus / Minus Query: 367 cacccgaacatcaacagcaacggcagcatttgccttgaca 406 ||||| || ||||||||||| |||||||||| ||| |||| Sbjct: 158070 caccctaatatcaacagcaatggcagcatttacctggaca 158031
>ref|XM_589208.2| PREDICTED: Bos taurus similar to ubiquitin-conjugating enzyme E2D 4 (putative) (LOC511801), mRNA Length = 621 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 373 aacatcaacagcaacggcagcatttgccttgacat 407 |||||||||||||| |||||||| ||||||||||| Sbjct: 313 aacatcaacagcaatggcagcatctgccttgacat 347
>gb|AY684132.1| Vitis vinifera ubiquitin-conjugating enzyme mRNA, partial cds Length = 133 Score = 54.0 bits (27), Expect = 4e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 151 tccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctcatgcagc 210 |||||| | |||||||||||||| ||||| || ||||| || ||||| || || ||||| Sbjct: 1 tccaagcgcatcctcaaggagctcaaggatctccagaaagatcctccgacatcttgcagt 60 Query: 211 gcaggtcctgtaggtgaggacatgttccactggca 245 || || ||||| | ||| ||||||||||| ||||| Sbjct: 61 gctggccctgttgctgaagacatgttccattggca 95
>ref|XM_905852.2| PREDICTED: Mus musculus similar to ubiquitin-conjugating enzyme E2D 4 (putative) (LOC546638), mRNA Length = 327 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 210 cgcaggtcctgtaggtgaggacatgttccactggcaggccactatcatggg 260 |||||| ||||| ||||| ||| ||||||||||||||||||| ||| |||| Sbjct: 66 cgcaggacctgtgggtgatgacttgttccactggcaggccaccatcctggg 116 Score = 40.1 bits (20), Expect = 5.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 367 cacccgaacatcaacagcaacggcagcatttgccttgaca 406 ||||| || ||||||||||| |||||||||| ||| |||| Sbjct: 223 caccctaatatcaacagcaatggcagcatttacctggaca 262
>ref|XM_621400.3| PREDICTED: Mus musculus similar to ubiquitin-conjugating enzyme E2D 4 (putative) (LOC546638), mRNA Length = 327 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 210 cgcaggtcctgtaggtgaggacatgttccactggcaggccactatcatggg 260 |||||| ||||| ||||| ||| ||||||||||||||||||| ||| |||| Sbjct: 66 cgcaggacctgtgggtgatgacttgttccactggcaggccaccatcctggg 116 Score = 40.1 bits (20), Expect = 5.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 367 cacccgaacatcaacagcaacggcagcatttgccttgaca 406 ||||| || ||||||||||| |||||||||| ||| |||| Sbjct: 223 caccctaatatcaacagcaatggcagcatttacctggaca 262
>gb|BC109525.1| Bos taurus cDNA clone MGC:134000 IMAGE:8054286, complete cds Length = 1432 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 373 aacatcaacagcaacggcagcatttgccttgacat 407 |||||||||||||| |||||||| ||||||||||| Sbjct: 321 aacatcaacagcaatggcagcatctgccttgacat 355
>gb|AY082010.1| Gossypium raimondii ubiquitin-conjugating enzyme E2 gene, complete cds Length = 2013 Score = 54.0 bits (27), Expect = 4e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 355 accaaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaag 414 |||||||| ||||| || |||||||| ||||| || |||||||| ||||| || || || Sbjct: 1146 accaaggttttccatccaaacatcaatagcaatgggagcatttgtcttgatatcctaaaa 1205 Query: 415 gaacagtggag 425 ||||||||||| Sbjct: 1206 gaacagtggag 1216
>gb|AY082009.1| Gossypium thurberi ubiquitin-conjugating enzyme E2 gene, complete cds Length = 2016 Score = 54.0 bits (27), Expect = 4e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 355 accaaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaag 414 |||||||| ||||| || |||||||| ||||| || |||||||| ||||| || || || Sbjct: 1145 accaaggttttccatccaaacatcaatagcaatgggagcatttgtcttgatatcctaaaa 1204 Query: 415 gaacagtggag 425 ||||||||||| Sbjct: 1205 gaacagtggag 1215
>gb|AY082008.1| Gossypium arboreum ubiquitin-conjugating enzyme E2 gene, complete cds Length = 1985 Score = 54.0 bits (27), Expect = 4e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 355 accaaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaag 414 |||||||| ||||| || |||||||| ||||| || |||||||| ||||| || || || Sbjct: 1144 accaaggttttccatccaaacatcaatagcaatgggagcatttgtcttgatatcctaaaa 1203 Query: 415 gaacagtggag 425 ||||||||||| Sbjct: 1204 gaacagtggag 1214
>gb|AY082007.1| Gossypium hirsutum ubiquitin-conjugating enzyme E2 (UBC2) gene, complete cds Length = 1953 Score = 54.0 bits (27), Expect = 4e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 355 accaaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaag 414 |||||||| ||||| || |||||||| ||||| || |||||||| ||||| || || || Sbjct: 1145 accaaggttttccatccaaacatcaatagcaatgggagcatttgtcttgatatcctaaaa 1204 Query: 415 gaacagtggag 425 ||||||||||| Sbjct: 1205 gaacagtggag 1215
>gb|AY082006.1| Gossypium hirsutum ubiquitin-conjugating enzyme E2 (UBC1) gene, complete cds Length = 1982 Score = 54.0 bits (27), Expect = 4e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 355 accaaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaag 414 |||||||| ||||| || |||||||| ||||| || |||||||| ||||| || || || Sbjct: 1143 accaaggttttccatccaaacatcaatagcaatgggagcatttgtcttgatatcctaaaa 1202 Query: 415 gaacagtggag 425 ||||||||||| Sbjct: 1203 gaacagtggag 1213
>ref|XM_954840.1| Neurospora crassa OR74A hypothetical protein ( (XM_016084) hypothetical protein XP_016084 [Homo sapiens] ) (NCU02289.1) partial mRNA Length = 444 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 366 ccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaacagtggag 425 |||||| ||||||||| ||||||||||| ||||| |||||||| | ||| |||||||| Sbjct: 222 ccaccccaacatcaactcgaacggcagcatctgcctcgacattctgagggatcagtggag 281 Query: 426 cccggc 431 ||||| Sbjct: 282 tccggc 287
>ref|XM_331064.1| Neurospora crassa OR74A hypothetical protein ( (XM_016084) hypothetical protein XP_016084 [Homo sapiens] ) (NCU02289.1) partial mRNA Length = 444 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 366 ccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaacagtggag 425 |||||| ||||||||| ||||||||||| ||||| |||||||| | ||| |||||||| Sbjct: 222 ccaccccaacatcaactcgaacggcagcatctgcctcgacattctgagggatcagtggag 281 Query: 426 cccggc 431 ||||| Sbjct: 282 tccggc 287
>ref|XM_655273.1| Aspergillus nidulans FGSC A4 ubiquitin-conjugating enzyme E2-16 kDa (AN2761.2), mRNA Length = 444 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 370 ccgaacatcaacagcaacggcagcatttgccttgacattctc 411 |||||||||||| ||||||||| || ||||||||||||||| Sbjct: 226 ccgaacatcaactccaacggcagtatctgccttgacattctc 267
>ref|XM_502855.1| Yarrowia lipolytica CLIB122, YALI0D15312g predicted mRNA Length = 444 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 233 tgttccactggcaggccactatcatggggccctc 266 |||||||||||||||| ||||||||||| ||||| Sbjct: 89 tgttccactggcaggctactatcatgggcccctc 122
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 233 tgttccactggcaggccactatcatggggccctc 266 |||||||||||||||| ||||||||||| ||||| Sbjct: 1866805 tgttccactggcaggctactatcatgggcccctc 1866772
>gb|DQ284472.1| Solanum tuberosum clone 116D11 ubiquitin-conjugating protein-like mRNA, complete cds Length = 531 Score = 52.0 bits (26), Expect = 0.002 Identities = 98/122 (80%) Strand = Plus / Plus Query: 304 attcatttcccaccggattaccccttcaagcccccgaaggtctctttccgcaccaaggtg 363 ||||||||||| || ||||| || || ||||| || ||||| | ||| | || ||||| Sbjct: 82 attcatttccctccagattatccttttaagcctccaaaggttgccttcagaactaaggtt 141 Query: 364 ttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaacagtgg 423 ||||| || |||||||| ||||| || || ||||| || || ||||||||||| |||||| Sbjct: 142 ttccatcccaacatcaatagcaatggaagtatttgtctggatattctcaaggagcagtgg 201 Query: 424 ag 425 || Sbjct: 202 ag 203
>ref|XM_001003835.1| PREDICTED: Mus musculus RIKEN cDNA 2210015D19 gene, transcript variant 3 (2210015D19Rik), mRNA Length = 1854 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 367 cacccgaacatcaacagcaacggcagcatttgccttgacat 407 ||||| || ||||||||||| |||||||||||||| ||||| Sbjct: 208 caccctaatatcaacagcaatggcagcatttgcctggacat 248
>ref|XM_001003819.1| PREDICTED: Mus musculus RIKEN cDNA 2210015D19 gene, transcript variant 1 (2210015D19Rik), mRNA Length = 430 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 367 cacccgaacatcaacagcaacggcagcatttgccttgacat 407 ||||| || ||||||||||| |||||||||||||| ||||| Sbjct: 151 caccctaatatcaacagcaatggcagcatttgcctggacat 191
>ref|XM_900750.2| PREDICTED: Mus musculus RIKEN cDNA 2210015D19 gene, transcript variant 5 (2210015D19Rik), mRNA Length = 1854 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 367 cacccgaacatcaacagcaacggcagcatttgccttgacat 407 ||||| || ||||||||||| |||||||||||||| ||||| Sbjct: 208 caccctaatatcaacagcaatggcagcatttgcctggacat 248
>ref|XM_893272.2| PREDICTED: Mus musculus RIKEN cDNA 2210015D19 gene, transcript variant 2 (2210015D19Rik), mRNA Length = 430 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 367 cacccgaacatcaacagcaacggcagcatttgccttgacat 407 ||||| || ||||||||||| |||||||||||||| ||||| Sbjct: 151 caccctaatatcaacagcaatggcagcatttgcctggacat 191
>ref|XM_850927.1| PREDICTED: Canis familiaris similar to Ubiquitin-conjugating enzyme E2 D2 (Ubiquitin-protein ligase D2) (Ubiquitin carrier protein D2) (Ubiquitin-conjugating enzyme E2-17 kDa 2) (E2(17)KB 2), transcript variant 6 (LOC612742), mRNA Length = 2283 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 304 attcatttcccaccggattaccccttcaagcccccgaaggt 344 |||||||||||| | ||||||||||||||||| || ||||| Sbjct: 366 attcatttcccaacagattaccccttcaagccacctaaggt 406
>ref|XM_850890.1| PREDICTED: Canis familiaris similar to Ubiquitin-conjugating enzyme E2 D2 (Ubiquitin-protein ligase D2) (Ubiquitin carrier protein D2) (Ubiquitin-conjugating enzyme E2-17 kDa 2) (E2(17)KB 2), transcript variant 5 (LOC612742), mRNA Length = 2703 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 304 attcatttcccaccggattaccccttcaagcccccgaaggt 344 |||||||||||| | ||||||||||||||||| || ||||| Sbjct: 786 attcatttcccaacagattaccccttcaagccacctaaggt 826 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 211 gcaggtcctgtaggtgaggacatgttccactggcaggccactatcatggggcc 263 ||||||||||| || || || |||||||| |||||||| || || |||||||| Sbjct: 693 gcaggtcctgttggagatgatatgttccattggcaggctacaataatggggcc 745
>ref|XM_850849.1| PREDICTED: Canis familiaris similar to Ubiquitin-conjugating enzyme E2 D2 (Ubiquitin-protein ligase D2) (Ubiquitin carrier protein D2) (Ubiquitin-conjugating enzyme E2-17 kDa 2) (E2(17)KB 2), transcript variant 4 (LOC612742), mRNA Length = 2324 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 304 attcatttcccaccggattaccccttcaagcccccgaaggt 344 |||||||||||| | ||||||||||||||||| || ||||| Sbjct: 567 attcatttcccaacagattaccccttcaagccacctaaggt 607 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 211 gcaggtcctgtaggtgaggacatgttccactggcaggccactatcatggggcc 263 ||||||||||| || || || |||||||| |||||||| || || |||||||| Sbjct: 474 gcaggtcctgttggagatgatatgttccattggcaggctacaataatggggcc 526
>ref|XM_850803.1| PREDICTED: Canis familiaris similar to Ubiquitin-conjugating enzyme E2 D2 (Ubiquitin-protein ligase D2) (Ubiquitin carrier protein D2) (Ubiquitin-conjugating enzyme E2-17 kDa 2) (E2(17)KB 2), transcript variant 3 (LOC612742), mRNA Length = 1121 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 304 attcatttcccaccggattaccccttcaagcccccgaaggt 344 |||||||||||| | ||||||||||||||||| || ||||| Sbjct: 567 attcatttcccaacagattaccccttcaagccacctaaggt 607 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 211 gcaggtcctgtaggtgaggacatgttccactggcaggccactatcatggggcc 263 ||||||||||| || || || |||||||| |||||||| || || |||||||| Sbjct: 474 gcaggtcctgttggagatgatatgttccattggcaggctacaataatggggcc 526
>ref|XM_843232.1| PREDICTED: Canis familiaris similar to Ubiquitin-conjugating enzyme E2 D2 (Ubiquitin-protein ligase D2) (Ubiquitin carrier protein D2) (Ubiquitin-conjugating enzyme E2-17 kDa 2) (E2(17)KB 2), transcript variant 1 (LOC612742), mRNA Length = 1113 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 304 attcatttcccaccggattaccccttcaagcccccgaaggt 344 |||||||||||| | ||||||||||||||||| || ||||| Sbjct: 567 attcatttcccaacagattaccccttcaagccacctaaggt 607 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 211 gcaggtcctgtaggtgaggacatgttccactggcaggccactatcatggggcc 263 ||||||||||| || || || |||||||| |||||||| || || |||||||| Sbjct: 474 gcaggtcctgttggagatgatatgttccattggcaggctacaataatggggcc 526
>gb|BC094935.1| Mus musculus cDNA clone IMAGE:30074732 Length = 1813 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 367 cacccgaacatcaacagcaacggcagcatttgccttgacat 407 ||||| || ||||||||||| |||||||||||||| ||||| Sbjct: 151 caccctaatatcaacagcaatggcagcatttgcctggacat 191
>emb|AL627069.10| Mouse DNA sequence from clone RP23-385C16 on chromosome 11 Contains the Mrps24 gene for mitochondrial ribosomal protein S24, a novel gene, a ubiquitin-conjugating enzyme E2D (Ube2d) pseudogene, the Dbnl gene for drebrin-like, the Pgam2 gene for phosphoglycerate mutase 2, a pseudogene similar to part of H+ transporting mitochondrial F0 complex ATP synthase subunit F Atp5j, the Polm gene for polymerase (DNA directed) mu, the Aebp1 gene for AE binding protein 1, the Pold2 gene for polymerase (DNA directed) delta 2 regulatory subunit, novel gene (1600028I17Rik) and seven CpG islands, complete sequence Length = 195129 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 367 cacccgaacatcaacagcaacggcagcatttgccttgacat 407 ||||| || ||||||||||| |||||||||||||| ||||| Sbjct: 85322 caccctaatatcaacagcaatggcagcatttgcctggacat 85362
>dbj|AK009198.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched library, clone:2310007D07 product:hypothetical Ubiquitin-conjugating enzymes containing protein, full insert sequence Length = 593 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 367 cacccgaacatcaacagcaacggcagcatttgccttgacat 407 ||||| || ||||||||||| |||||||||||||| ||||| Sbjct: 201 caccctaatatcaacagcaatggcagcatttgcctggacat 241
>dbj|AK008730.1| Mus musculus adult male stomach cDNA, RIKEN full-length enriched library, clone:2210015D19 product:UBIQUITIN CONJUGATING ENZYME (FRAGMENT) homolog [Strongyloides stercoralis], full insert sequence Length = 981 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 367 cacccgaacatcaacagcaacggcagcatttgccttgacat 407 ||||| || ||||||||||| |||||||||||||| ||||| Sbjct: 174 caccctaatatcaacagcaatggcagcatttgcctggacat 214
>dbj|AK005556.1| Mus musculus adult female placenta cDNA, RIKEN full-length enriched library, clone:1600028I17 product:unclassifiable, full insert sequence Length = 1840 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 367 cacccgaacatcaacagcaacggcagcatttgccttgacat 407 ||||| || ||||||||||| |||||||||||||| ||||| Sbjct: 443 caccctaatatcaacagcaatggcagcatttgcctggacat 483
>gb|BC052911.1| Mus musculus RIKEN cDNA 2210015D19 gene, mRNA (cDNA clone IMAGE:30075836) Length = 1825 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 367 cacccgaacatcaacagcaacggcagcatttgccttgacat 407 ||||| || ||||||||||| |||||||||||||| ||||| Sbjct: 163 caccctaatatcaacagcaatggcagcatttgcctggacat 203
>dbj|AB011476.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MDA7 Length = 82033 Score = 50.1 bits (25), Expect = 0.006 Identities = 91/113 (80%) Strand = Plus / Plus Query: 232 atgttccactggcaggccactatcatggggccctcggagagcccgttcaccggtggtcta 291 |||||||| ||||| || ||||||||||| || | || |||||||| |||| ||| | Sbjct: 64334 atgttccaatggcaagcaactatcatgggtccagcagatagcccgtttgccggaggtgtg 64393 Query: 292 tttttggtcaacattcatttcccaccggattaccccttcaagcccccgaaggt 344 ||| | || | |||||| |||||||| |||||||| |||||||| || ||||| Sbjct: 64394 tttcttgttaccattcacttcccaccagattaccctttcaagccaccaaaggt 64446 Score = 48.1 bits (24), Expect = 0.024 Identities = 66/80 (82%) Strand = Plus / Plus Query: 349 ttccgcaccaaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacatt 408 ||||| |||||||| | ||||| ||||||||||| || || || || || ||||||||| Sbjct: 64590 ttccggaccaaggtttatcacccaaacatcaacagtaatggaagtatctgtcttgacatt 64649 Query: 409 ctcaaggaacagtggagccc 428 || || || ||||||||||| Sbjct: 64650 ctgaaagagcagtggagccc 64669
>gb|BT013204.1| Lycopersicon esculentum clone 134378F, mRNA sequence Length = 774 Score = 48.1 bits (24), Expect = 0.024 Identities = 66/80 (82%) Strand = Plus / Plus Query: 166 aaggagctgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggt 225 |||||||| |||||||| ||||| || ||||| || || || ||||| || || || || Sbjct: 66 aaggagcttaaggaccttcagaaagatcctcctacttcttgtagcgctggccccgtcgga 125 Query: 226 gaggacatgttccactggca 245 ||||||||||| |||||||| Sbjct: 126 gaggacatgtttcactggca 145
>emb|AL161572.2|ATCHRIV68 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 68 Length = 199749 Score = 48.1 bits (24), Expect = 0.024 Identities = 39/44 (88%) Strand = Plus / Minus Query: 173 tgaaggacctgcagaaggaccctcccacctcatgcagcgcaggt 216 ||||||| ||||||||||| ||||| || ||||| ||||||||| Sbjct: 32658 tgaaggatctgcagaaggatcctcctacttcatgtagcgcaggt 32615 Score = 48.1 bits (24), Expect = 0.024 Identities = 57/68 (83%) Strand = Plus / Minus Query: 358 aaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaa 417 ||||||||||| || ||||| |||||||| || ||||| ||||| ||||| | ||||| Sbjct: 31874 aaggtgttccatccaaacattaacagcaatggaagcatctgcctcgacatcttgaaggag 31815 Query: 418 cagtggag 425 |||||||| Sbjct: 31814 cagtggag 31807 Score = 46.1 bits (23), Expect = 0.094 Identities = 41/47 (87%) Strand = Plus / Minus Query: 229 gacatgttccactggcaggccactatcatggggccctcggagagccc 275 |||||||| || |||||||||||||| ||||| || ||||| ||||| Sbjct: 32169 gacatgtttcattggcaggccactataatgggtccatcggatagccc 32123
>emb|AL035524.1|ATT13J8 Arabidopsis thaliana DNA chromosome 4, BAC clone T13J8 (ESSAII project) Length = 83693 Score = 48.1 bits (24), Expect = 0.024 Identities = 39/44 (88%) Strand = Plus / Minus Query: 173 tgaaggacctgcagaaggaccctcccacctcatgcagcgcaggt 216 ||||||| ||||||||||| ||||| || ||||| ||||||||| Sbjct: 27522 tgaaggatctgcagaaggatcctcctacttcatgtagcgcaggt 27479 Score = 48.1 bits (24), Expect = 0.024 Identities = 57/68 (83%) Strand = Plus / Minus Query: 358 aaggtgttccacccgaacatcaacagcaacggcagcatttgccttgacattctcaaggaa 417 ||||||||||| || ||||| |||||||| || ||||| ||||| ||||| | ||||| Sbjct: 26738 aaggtgttccatccaaacattaacagcaatggaagcatctgcctcgacatcttgaaggag 26679 Query: 418 cagtggag 425 |||||||| Sbjct: 26678 cagtggag 26671 Score = 46.1 bits (23), Expect = 0.094 Identities = 41/47 (87%) Strand = Plus / Minus Query: 229 gacatgttccactggcaggccactatcatggggccctcggagagccc 275 |||||||| || |||||||||||||| ||||| || ||||| ||||| Sbjct: 27033 gacatgtttcattggcaggccactataatgggtccatcggatagccc 26987
>emb|AJ298327.1|PFL298327 Platichthys flesus partial mRNA for putative ubiquitin-conjugating enzyme (ubc gene) Length = 296 Score = 48.1 bits (24), Expect = 0.024 Identities = 36/40 (90%) Strand = Plus / Plus Query: 217 cctgtaggtgaggacatgttccactggcaggccactatca 256 |||||||| ||||||||||| |||||||| ||||| |||| Sbjct: 53 cctgtaggagaggacatgtttcactggcaagccaccatca 92 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 367 cacccgaacatcaacagcaacggcagcatttgccttgacat 407 ||||| ||||| |||||||| || ||||| ||||||||||| Sbjct: 203 caccctaacataaacagcaatggtagcatctgccttgacat 243
>gb|AC148346.12| Medicago truncatula clone mth2-25m19, complete sequence Length = 122590 Score = 48.1 bits (24), Expect = 0.024 Identities = 60/72 (83%) Strand = Plus / Minus Query: 145 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 204 |||||||||||||| || | |||||||| |||||| |||||| || || || |||||| Sbjct: 97644 atggcgtccaagagaatagttaaggagcttaaggacttgcagagagatccaccaacctca 97585 Query: 205 tgcagcgcaggt 216 ||||| |||||| Sbjct: 97584 tgcagtgcaggt 97573
>dbj|AB226249.1| Aspergillus oryzae cDNA, contig sequence: AoEST3108 Length = 1024 Score = 48.1 bits (24), Expect = 0.024 Identities = 39/44 (88%) Strand = Plus / Plus Query: 217 cctgtaggtgaggacatgttccactggcaggccactatcatggg 260 ||||||||||| ||| ||||||||||||| || ||||| ||||| Sbjct: 234 cctgtaggtgaagacttgttccactggcaagctactattatggg 277
>gb|AC004985.2| Homo sapiens PAC clone RP5-1165K10 from 7, complete sequence Length = 159507 Score = 48.1 bits (24), Expect = 0.024 Identities = 27/28 (96%) Strand = Plus / Minus Query: 233 tgttccactggcaggccactatcatggg 260 ||||||||||||||||||| |||||||| Sbjct: 22574 tgttccactggcaggccaccatcatggg 22547 Score = 44.1 bits (22), Expect = 0.37 Identities = 34/38 (89%) Strand = Plus / Minus Query: 367 cacccgaacatcaacagcaacggcagcatttgccttga 404 ||||| || ||||||||||| |||||||| |||||||| Sbjct: 16744 caccctaatatcaacagcaatggcagcatctgccttga 16707
>gb|AC013289.11|AC013289 Arabidopsis thaliana chromosome 1 BAC T6C23 genomic sequence, complete sequence Length = 87148 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 377 tcaacagcaacggcagcatttgccttgacatt 408 ||||||||||||| ||||||||||| |||||| Sbjct: 63790 tcaacagcaacggaagcatttgcctcgacatt 63821
>emb|AJ718680.1| Nicotiana tabacum cDNA-AFLP-fragment BSTC4-23-270, cultivar Bright Yellow 2 Length = 225 Score = 48.1 bits (24), Expect = 0.024 Identities = 94/119 (78%) Strand = Plus / Plus Query: 226 gaggacatgttccactggcaggccactatcatggggccctcggagagcccgttcaccggt 285 ||||| |||||||| ||||| || || ||||||||||| | || ||||| | | || Sbjct: 19 gaggatatgttccattggcangctacaatcatggggcctacaganagcccttangctggn 78 Query: 286 ggtctatttttggtcaacattcatttcccaccggattaccccttcaagcccccgaaggt 344 ||| |||||||||| ||||||||||| |||||||| || |||||||| || ||||| Sbjct: 79 ggtgtatttttggttncaattcatttccctccggattatcctttcaagcctccaaaggt 137
>emb|BX537878.1|HSM805984 Homo sapiens mRNA; cDNA DKFZp686A08114 (from clone DKFZp686A08114) Length = 6486 Score = 48.1 bits (24), Expect = 0.024 Identities = 27/28 (96%) Strand = Plus / Minus Query: 233 tgttccactggcaggccactatcatggg 260 ||||||||||||||||||| |||||||| Sbjct: 4535 tgttccactggcaggccaccatcatggg 4508
>ref|NM_003338.3| Homo sapiens ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast) (UBE2D1), mRNA Length = 2669 Score = 46.1 bits (23), Expect = 0.094 Identities = 29/31 (93%) Strand = Plus / Plus Query: 233 tgttccactggcaggccactatcatggggcc 263 ||||||||||||| |||||||| |||||||| Sbjct: 312 tgttccactggcaagccactattatggggcc 342
>ref|XM_513119.1| PREDICTED: Pan troglodytes similar to hypothetical protein FLJ10521 (LOC456533), mRNA Length = 4239 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 167 aggagctgaaggacctgcagaaggacc 193 |||||||| |||||||||||||||||| Sbjct: 2597 aggagctgcaggacctgcagaaggacc 2623
>gb|AY769917.1| Arachis hypogaea ubiquitin-conjugating enzyme (UBC) mRNA, complete cds Length = 780 Score = 46.1 bits (23), Expect = 0.094 Identities = 203/263 (77%) Strand = Plus / Plus Query: 166 aaggagctgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggt 225 |||||| |||||||||| |||||||| ||||| || ||||| || || ||||| ||| Sbjct: 154 aaggagttgaaggacctacagaaggatcctcctgtttcctgcagtgctggccctgttggt 213 Query: 226 gaggacatgttccactggcaggccactatcatggggccctcggagagcccgttcaccggt 285 || |||||||| || ||||| || || || ||||| ||| | || ||||| | | ||| Sbjct: 214 gatgacatgtttcattggcaagcaacaattatgggtcccgcagacagcccttatgctggt 273 Query: 286 ggtctatttttggtcaacattcatttcccaccggattaccccttcaagcccccgaaggtc 345 ||| |||| | || |||||||| |||||||| || || || || ||||| || ||||| Sbjct: 274 ggtgtattcctagtgaacattcacttcccaccagactatccatttaagccaccaaaggtt 333 Query: 346 tctttccgcaccaaggtgttccacccgaacatcaacagcaacggcagcatttgccttgac 405 ||||| || ||||| || ||||| || ||| ||| ||| || ||||| || |||||| Sbjct: 334 tcttttaaaacaaaggtctttcaccctaatatctacaacaatggaagcatatgtcttgac 393 Query: 406 attctcaaggaacagtggagccc 428 ||||| || || ||||||||||| Sbjct: 394 attctgaaagagcagtggagccc 416
>gb|BC015997.1| Homo sapiens ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast), mRNA (cDNA clone MGC:27216 IMAGE:4305900), complete cds Length = 1546 Score = 46.1 bits (23), Expect = 0.094 Identities = 29/31 (93%) Strand = Plus / Plus Query: 233 tgttccactggcaggccactatcatggggcc 263 ||||||||||||| |||||||| |||||||| Sbjct: 287 tgttccactggcaagccactattatggggcc 317
>ref|NM_001011722.2| Homo sapiens Rho guanine nucleotide exchange factor (GEF) 10-like (ARHGEF10L), transcript variant 2, mRNA Length = 4269 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 167 aggagctgaaggacctgcagaaggacc 193 |||||||| |||||||||||||||||| Sbjct: 1887 aggagctgcaggacctgcagaaggacc 1913
>ref|NM_018125.3| Homo sapiens Rho guanine nucleotide exchange factor (GEF) 10-like (ARHGEF10L), transcript variant 1, mRNA Length = 4502 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 167 aggagctgaaggacctgcagaaggacc 193 |||||||| |||||||||||||||||| Sbjct: 2120 aggagctgcaggacctgcagaaggacc 2146
>gb|DQ139833.1| Homo sapiens Rho-specific guanine nucleotide exchange factor GrinchGEF mRNA, complete cds Length = 4198 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 167 aggagctgaaggacctgcagaaggacc 193 |||||||| |||||||||||||||||| Sbjct: 1829 aggagctgcaggacctgcagaaggacc 1855
>ref|XM_991413.1| PREDICTED: Mus musculus Rho guanine nucleotide exchange factor (GEF) 10-like (Arhgef10l), mRNA Length = 4504 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 167 aggagctgaaggacctgcagaaggacc 193 |||||||| |||||||||||||||||| Sbjct: 2080 aggagctgcaggacctgcagaaggacc 2106
>ref|XM_544536.2| PREDICTED: Canis familiaris similar to Rho guanine nucleotide exchange factor (GEF) 10-like isoform 1, transcript variant 1 (LOC487411), mRNA Length = 3174 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 167 aggagctgaaggacctgcagaaggacc 193 |||||||| |||||||||||||||||| Sbjct: 1283 aggagctgcaggacctgcagaaggacc 1309
>ref|XM_859488.1| PREDICTED: Canis familiaris similar to Rho guanine nucleotide exchange factor (GEF) 10-like isoform 1, transcript variant 2 (LOC487411), mRNA Length = 2964 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 167 aggagctgaaggacctgcagaaggacc 193 |||||||| |||||||||||||||||| Sbjct: 1073 aggagctgcaggacctgcagaaggacc 1099
>gb|AY135219.1| Pavlova lutheri ubiquitin-conjugating enzyme E2 (ubc1) mRNA, complete cds Length = 654 Score = 46.1 bits (23), Expect = 0.094 Identities = 32/35 (91%) Strand = Plus / Plus Query: 397 tgccttgacattctcaaggaacagtggagcccggc 431 |||||||||||||||||||| ||||||| ||||| Sbjct: 308 tgccttgacattctcaaggacaagtggagtccggc 342
>emb|AL358593.22| Human DNA sequence from clone RP11-473A10 on chromosome 1 Contains the 3' end of the gene for a novel protein (KIAA1626, FLJ34701, FLJ44929, FLJ10521) and the 5' end of a novel gene, complete sequence Length = 142454 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 167 aggagctgaaggacctgcagaaggacc 193 |||||||| |||||||||||||||||| Sbjct: 52974 aggagctgcaggacctgcagaaggacc 53000
>emb|X78140.1|HSUBCH5 H.sapiens UBCH5 mRNA for ubiquitin conjugating enzyme Length = 459 Score = 46.1 bits (23), Expect = 0.094 Identities = 29/31 (93%) Strand = Plus / Plus Query: 233 tgttccactggcaggccactatcatggggcc 263 ||||||||||||| |||||||| |||||||| Sbjct: 104 tgttccactggcaagccactattatggggcc 134
>gb|AC026954.14| Homo sapiens chromosome 17, clone RP11-542C16, complete sequence Length = 101029 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 65 gcagaggggagaggcggccgccgccgc 91 ||||||||||| ||||||||||||||| Sbjct: 29321 gcagaggggagcggcggccgccgccgc 29347
>emb|AJ293565.1|HSA293565 Homo sapiens UBCH5 gene for ubiquitin-conjugating enzyme, exons 1-7 Length = 34548 Score = 46.1 bits (23), Expect = 0.094 Identities = 29/31 (93%) Strand = Plus / Plus Query: 233 tgttccactggcaggccactatcatggggcc 263 ||||||||||||| |||||||| |||||||| Sbjct: 26413 tgttccactggcaagccactattatggggcc 26443
>emb|AJ272367.1|HSA272367 Homo sapiens mRNA for ubiquitin-conjugating enzyme (UBCH5 gene) Length = 1420 Score = 46.1 bits (23), Expect = 0.094 Identities = 29/31 (93%) Strand = Plus / Plus Query: 233 tgttccactggcaggccactatcatggggcc 263 ||||||||||||| |||||||| |||||||| Sbjct: 235 tgttccactggcaagccactattatggggcc 265
>gb|BT007772.1| Synthetic construct Homo sapiens ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast) mRNA, partial cds Length = 444 Score = 46.1 bits (23), Expect = 0.094 Identities = 29/31 (93%) Strand = Plus / Plus Query: 233 tgttccactggcaggccactatcatggggcc 263 ||||||||||||| |||||||| |||||||| Sbjct: 89 tgttccactggcaagccactattatggggcc 119
>gb|BT007041.1| Homo sapiens ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast) mRNA, complete cds Length = 444 Score = 46.1 bits (23), Expect = 0.094 Identities = 29/31 (93%) Strand = Plus / Plus Query: 233 tgttccactggcaggccactatcatggggcc 263 ||||||||||||| |||||||| |||||||| Sbjct: 89 tgttccactggcaagccactattatggggcc 119
>gb|BC021843.1| Mus musculus Rho guanine nucleotide exchange factor (GEF) 10-like, mRNA (cDNA clone IMAGE:4016433), partial cds Length = 2598 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 167 aggagctgaaggacctgcagaaggacc 193 |||||||| |||||||||||||||||| Sbjct: 276 aggagctgcaggacctgcagaaggacc 302
>gb|BC059220.1| Mus musculus Rho guanine nucleotide exchange factor (GEF) 10-like, mRNA (cDNA clone MGC:66605 IMAGE:6417641), complete cds Length = 4513 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 167 aggagctgaaggacctgcagaaggacc 193 |||||||| |||||||||||||||||| Sbjct: 2094 aggagctgcaggacctgcagaaggacc 2120
>gb|BC034061.1| Mus musculus Rho guanine nucleotide exchange factor (GEF) 10-like, mRNA (cDNA clone IMAGE:4166618) Length = 3679 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 167 aggagctgaaggacctgcagaaggacc 193 |||||||| |||||||||||||||||| Sbjct: 1267 aggagctgcaggacctgcagaaggacc 1293
>emb|CR860834.1| Pongo pygmaeus mRNA; cDNA DKFZp469F1814 (from clone DKFZp469F1814) Length = 4374 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 167 aggagctgaaggacctgcagaaggacc 193 |||||||| |||||||||||||||||| Sbjct: 1987 aggagctgcaggacctgcagaaggacc 2013
>gb|BC080596.1| Homo sapiens Rho guanine nucleotide exchange factor (GEF) 10-like, mRNA (cDNA clone IMAGE:4589063), partial cds Length = 2891 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 167 aggagctgaaggacctgcagaaggacc 193 |||||||| |||||||||||||||||| Sbjct: 783 aggagctgcaggacctgcagaaggacc 809
>gb|BC065561.1| Homo sapiens Rho guanine nucleotide exchange factor (GEF) 10-like, mRNA (cDNA clone IMAGE:6144815), partial cds Length = 3009 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 167 aggagctgaaggacctgcagaaggacc 193 |||||||| |||||||||||||||||| Sbjct: 622 aggagctgcaggacctgcagaaggacc 648
>gb|AF257220.1| Homo sapiens ubiquitin-conjugating enzyme (UBCH5) mRNA, complete cds Length = 1441 Score = 46.1 bits (23), Expect = 0.094 Identities = 29/31 (93%) Strand = Plus / Plus Query: 233 tgttccactggcaggccactatcatggggcc 263 ||||||||||||| |||||||| |||||||| Sbjct: 235 tgttccactggcaagccactattatggggcc 265
>emb|CR620939.1| full-length cDNA clone CS0DI067YA24 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1428 Score = 46.1 bits (23), Expect = 0.094 Identities = 29/31 (93%) Strand = Plus / Plus Query: 233 tgttccactggcaggccactatcatggggcc 263 ||||||||||||| |||||||| |||||||| Sbjct: 254 tgttccactggcaagccactattatggggcc 284
>dbj|AK126877.1| Homo sapiens cDNA FLJ44929 fis, clone BRAMY3015547, weakly similar to Homo sapiens Rho guanine nucleotide exchange factor (GEF) 10 (ARHGEF10) Length = 4586 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 167 aggagctgaaggacctgcagaaggacc 193 |||||||| |||||||||||||||||| Sbjct: 2226 aggagctgcaggacctgcagaaggacc 2252
>emb|CR619802.1| full-length cDNA clone CS0DI014YI15 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1469 Score = 46.1 bits (23), Expect = 0.094 Identities = 29/31 (93%) Strand = Plus / Plus Query: 233 tgttccactggcaggccactatcatggggcc 263 ||||||||||||| |||||||| |||||||| Sbjct: 314 tgttccactggcaagccactattatggggcc 344
>emb|CR617065.1| full-length cDNA clone CS0DI003YL20 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1472 Score = 46.1 bits (23), Expect = 0.094 Identities = 29/31 (93%) Strand = Plus / Plus Query: 233 tgttccactggcaggccactatcatggggcc 263 ||||||||||||| |||||||| |||||||| Sbjct: 314 tgttccactggcaagccactattatggggcc 344
>dbj|AK092020.1| Homo sapiens cDNA FLJ34701 fis, clone MESAN2002724, weakly similar to Rho guanine nucleotide exchange factor (GEF) 10 Length = 3476 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 167 aggagctgaaggacctgcagaaggacc 193 |||||||| |||||||||||||||||| Sbjct: 1108 aggagctgcaggacctgcagaaggacc 1134
>emb|CR603407.1| full-length cDNA clone CS0DI004YK19 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1487 Score = 46.1 bits (23), Expect = 0.094 Identities = 29/31 (93%) Strand = Plus / Plus Query: 233 tgttccactggcaggccactatcatggggcc 263 ||||||||||||| |||||||| |||||||| Sbjct: 314 tgttccactggcaagccactattatggggcc 344
>emb|CR594114.1| full-length cDNA clone CS0DI009YK11 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1452 Score = 46.1 bits (23), Expect = 0.094 Identities = 29/31 (93%) Strand = Plus / Plus Query: 233 tgttccactggcaggccactatcatggggcc 263 ||||||||||||| |||||||| |||||||| Sbjct: 300 tgttccactggcaagccactattatggggcc 330
>gb|AC023170.10| Homo sapiens chromosome 10 clone RP11-373P23, complete sequence Length = 195448 Score = 46.1 bits (23), Expect = 0.094 Identities = 29/31 (93%) Strand = Plus / Minus Query: 233 tgttccactggcaggccactatcatggggcc 263 ||||||||||||| |||||||| |||||||| Sbjct: 161620 tgttccactggcaagccactattatggggcc 161590
>dbj|AK028648.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732426B21 product:hypothetical Dbl domain (dbl/cdc24 rhoGEF family) containing protein, full insert sequence Length = 4204 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 167 aggagctgaaggacctgcagaaggacc 193 |||||||| |||||||||||||||||| Sbjct: 2014 aggagctgcaggacctgcagaaggacc 2040
>dbj|AK028570.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732402F20 product:hypothetical DBL homology domain structure containing protein, full insert sequence Length = 3751 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 167 aggagctgaaggacctgcagaaggacc 193 |||||||| |||||||||||||||||| Sbjct: 1447 aggagctgcaggacctgcagaaggacc 1473
>dbj|AB047595.1| Macaca fascicularis brain cDNA, clone:QnpA-11607, similar to human hypothetical protein FLJ1052, mRNA, NM_018125 Length = 2366 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 167 aggagctgaaggacctgcagaaggacc 193 |||||||| |||||||||||||||||| Sbjct: 1848 aggagctgcaggacctgcagaaggacc 1874
>gb|AF461687.1| Pinus pinaster putative ubiquitin mRNA, partial cds Length = 424 Score = 46.1 bits (23), Expect = 0.094 Identities = 86/107 (80%) Strand = Plus / Plus Query: 319 gattaccccttcaagcccccgaaggtctctttccgcaccaaggtgttccacccgaacatc 378 |||||||||||||||||||| ||||| ||||| |||||||| | || || |||||| Sbjct: 152 gattaccccttcaagcccccaaaggttaatttccaaaccaaggtttatcatccaaacatc 211 Query: 379 aacagcaacggcagcatttgccttgacattctcaaggaacagtggag 425 ||| ||| || ||||| || | || || ||||||||||||||||| Sbjct: 212 aactccaatggtagcatctgtttggatatcctcaaggaacagtggag 258
>ref|NM_172415.2| Mus musculus Rho guanine nucleotide exchange factor (GEF) 10-like (Arhgef10l), mRNA Length = 4513 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 167 aggagctgaaggacctgcagaaggacc 193 |||||||| |||||||||||||||||| Sbjct: 2094 aggagctgcaggacctgcagaaggacc 2120
>emb|AL954710.27| Mouse DNA sequence from clone RP23-275J10 on chromosome 4, complete sequence Length = 202551 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Minus Query: 167 aggagctgaaggacctgcagaaggacc 193 |||||||| |||||||||||||||||| Sbjct: 30024 aggagctgcaggacctgcagaaggacc 29998
>gb|AY892617.1| Synthetic construct Homo sapiens clone FLH025197.01L ubiquitin-conjugating enzyme E2D 1 (UBE2D1) mRNA, partial cds Length = 444 Score = 46.1 bits (23), Expect = 0.094 Identities = 29/31 (93%) Strand = Plus / Plus Query: 233 tgttccactggcaggccactatcatggggcc 263 ||||||||||||| |||||||| |||||||| Sbjct: 89 tgttccactggcaagccactattatggggcc 119
>gb|AY890141.1| Synthetic construct Homo sapiens clone FLH025199.01X ubiquitin-conjugating enzyme E2D 1 (UBE2D1) mRNA, complete cds Length = 444 Score = 46.1 bits (23), Expect = 0.094 Identities = 29/31 (93%) Strand = Plus / Plus Query: 233 tgttccactggcaggccactatcatggggcc 263 ||||||||||||| |||||||| |||||||| Sbjct: 89 tgttccactggcaagccactattatggggcc 119
>gb|AY890140.1| Synthetic construct Homo sapiens clone FLH025198.01X ubiquitin-conjugating enzyme E2D 1 (UBE2D1) mRNA, complete cds Length = 444 Score = 46.1 bits (23), Expect = 0.094 Identities = 29/31 (93%) Strand = Plus / Plus Query: 233 tgttccactggcaggccactatcatggggcc 263 ||||||||||||| |||||||| |||||||| Sbjct: 89 tgttccactggcaagccactattatggggcc 119
>dbj|AK129408.1| Mus musculus mRNA for mKIAA1626 protein Length = 4297 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 167 aggagctgaaggacctgcagaaggacc 193 |||||||| |||||||||||||||||| Sbjct: 1989 aggagctgcaggacctgcagaaggacc 2015 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,810,942 Number of Sequences: 3902068 Number of extensions: 3810942 Number of successful extensions: 128394 Number of sequences better than 10.0: 489 Number of HSP's better than 10.0 without gapping: 492 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 125416 Number of HSP's gapped (non-prelim): 2942 length of query: 431 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 409 effective length of database: 17,147,199,772 effective search space: 7013204706748 effective search space used: 7013204706748 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)