ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl02d12 |
|---|---|
| Clone Library Name | barley_pub |
>SEC9_KLULA (Q6CSD1) Protein transport protein SEC9| Length = 556 Score = 38.1 bits (87), Expect = 0.011 Identities = 15/36 (41%), Positives = 23/36 (63%) Frame = +3 Query: 243 NPFGQSSASPFGQTSTNPFGTQQGFGQPSTTNNNPF 350 +P+G S +SP+G S +P+ T G+ P NNNP+ Sbjct: 118 SPYGNSDSSPYGNASASPYDT--GYNAPLQQNNNPY 151
>NUP98_RAT (P49793) Nuclear pore complex protein Nup98 (Nucleoporin Nup98) (98| kDa nucleoporin) Length = 937 Score = 36.2 bits (82), Expect = 0.043 Identities = 33/91 (36%), Positives = 37/91 (40%), Gaps = 11/91 (12%) Frame = +3 Query: 222 PAMFGANNPFGQS---SASPFGQ------TSTNPFGTQQG--FGQPSTTNNNPFAPKPFX 368 PA A F S SA +GQ TST FGT G FGQ + + F+ KPF Sbjct: 231 PATSSATGLFSSSTTNSAFSYGQNKTAFGTSTTGFGTNPGGLFGQQNQQTTSLFS-KPFG 289 Query: 369 XXXXXXXXXXXXXXXFGATSTFGQPSAPAFG 461 FG TST GQPS G Sbjct: 290 QATTTPNTGFS----FGNTSTLGQPSTNTMG 316
>NUP98_HUMAN (P52948) Nuclear pore complex protein Nup98-Nup96 precursor| [Contains: Nuclear pore complex protein Nup98 (Nucleoporin Nup98) (98 kDa nucleoporin); Nuclear pore complex protein Nup96 (Nucleoporin Nup96) (96 kDa nucleoporin)] Length = 1729 Score = 35.4 bits (80), Expect = 0.074 Identities = 28/73 (38%), Positives = 34/73 (46%), Gaps = 2/73 (2%) Frame = +3 Query: 249 FGQSSASPFGQTSTNPFGTQQG--FGQPSTTNNNPFAPKPFXXXXXXXXXXXXXXXXFGA 422 +GQ+ + FG TST FGT G FGQ + + F+ KPF FG Sbjct: 252 YGQNKTA-FG-TSTTGFGTNPGGLFGQQNQQTTSLFS-KPFGQATTTQNTGFS----FGN 304 Query: 423 TSTFGQPSAPAFG 461 TST GQPS G Sbjct: 305 TSTIGQPSTNTMG 317
>YAUF_SCHPO (Q10168) Hypothetical protein C26A3.15c in chromosome I| Length = 598 Score = 34.7 bits (78), Expect = 0.13 Identities = 24/70 (34%), Positives = 30/70 (42%), Gaps = 4/70 (5%) Frame = +3 Query: 231 FGANNPFGQ--SSASPFGQTSTNPFGTQQGFGQPSTT--NNNPFAPKPFXXXXXXXXXXX 398 F P GQ S+A+ G T+T+ GT FG+P+TT N P AP Sbjct: 270 FSFGKPAGQAASTATDKGTTTTSSAGTGFSFGKPATTEDTNKPTAPNSAFTKPATSTGDN 329 Query: 399 XXXXXFGATS 428 FG TS Sbjct: 330 KPTFSFGNTS 339
>NU116_YEAST (Q02630) Nucleoporin NUP116/NSP116 (Nuclear pore protein| NUP116/NSP116) Length = 1113 Score = 34.3 bits (77), Expect = 0.16 Identities = 24/72 (33%), Positives = 29/72 (40%), Gaps = 2/72 (2%) Frame = +3 Query: 225 AMFGANNPFGQSSASPFGQTSTNPFGTQQG--FGQPSTTNNNPFAPKPFXXXXXXXXXXX 398 ++FG NN QS+ FGQ N +Q G FGQ + NN PF Sbjct: 468 SIFGQNNQQQQSTGGLFGQ-QNNQSQSQPGGLFGQTNQNNNQPFGQNGLQQPQQNNSLFG 526 Query: 399 XXXXXFGATSTF 434 FG TS F Sbjct: 527 AKPTGFGNTSLF 538
>BAT3_MOUSE (Q9Z1R2) Large proline-rich protein BAT3 (HLA-B-associated| transcript 3) Length = 1154 Score = 34.3 bits (77), Expect = 0.16 Identities = 13/26 (50%), Positives = 18/26 (69%) Frame = +1 Query: 289 PTPSGPNRALASPAPPTTIPSHPNPS 366 P P+GP A +PAP T P+HP+P+ Sbjct: 250 PAPAGPAPAGPAPAPETNAPNHPSPA 275
>ESAM_HUMAN (Q96AP7) Endothelial cell-selective adhesion molecule precursor| Length = 390 Score = 33.9 bits (76), Expect = 0.22 Identities = 17/35 (48%), Positives = 20/35 (57%) Frame = +1 Query: 259 HLPALLGRRQPTPSGPNRALASPAPPTTIPSHPNP 363 H P G PTPS ++AL SP PTT +HP P Sbjct: 323 HGPPRPGALTPTPSLSSQALPSPRLPTTDGAHPQP 357
>BAT3_RAT (Q6MG49) Large proline-rich protein BAT3 (HLA-B-associated| transcript 3) Length = 1096 Score = 32.7 bits (73), Expect = 0.48 Identities = 13/24 (54%), Positives = 17/24 (70%) Frame = +1 Query: 295 PSGPNRALASPAPPTTIPSHPNPS 366 PSGP A +PAP T P+HP+P+ Sbjct: 246 PSGPAPAGPAPAPETNAPNHPSPA 269
>NU189_SCHPO (Q9UTK4) Nucleoporin nup189 (Nuclear pore protein nup189)| Length = 1778 Score = 32.3 bits (72), Expect = 0.63 Identities = 30/95 (31%), Positives = 37/95 (38%), Gaps = 15/95 (15%) Frame = +3 Query: 231 FGANNP-----FGQSSASP----FGQTSTNPFGTQQGFGQP---STTNNNPFAPKPFXXX 374 FG NN FG +S +P FG +T+ G Q QP S TN F + Sbjct: 17 FGQNNQQTGGLFGSNSNTPGNTLFGSQNTSTTGFGQNTTQPLFGSNTNGGLFGNR----- 71 Query: 375 XXXXXXXXXXXXXFG---ATSTFGQPSAPAFGATS 470 FG T FGQ + PAFG T+ Sbjct: 72 ---NNTTTTGGTGFGMSSGTGMFGQSNTPAFGGTN 103
>FGD1_MOUSE (P52734) FYVE, RhoGEF and PH domain-containing protein 1| (Faciogenital dysplasia 1 protein homolog) (Zinc finger FYVE domain-containing protein 3) (Rho/Rac guanine nucleotide exchange factor FGD1) (Rho/Rac GEF) Length = 960 Score = 32.3 bits (72), Expect = 0.63 Identities = 14/27 (51%), Positives = 16/27 (59%) Frame = +1 Query: 286 QPTPSGPNRALASPAPPTTIPSHPNPS 366 +P P GP R + P PPT IP P PS Sbjct: 124 EPHPEGPQRLRSDPGPPTEIPG-PRPS 149
>LRP2_HHV1F (P17589) Latency-related protein 2| Length = 107 Score = 32.0 bits (71), Expect = 0.82 Identities = 19/48 (39%), Positives = 25/48 (52%) Frame = +1 Query: 226 PCSALTIHSGSHLPALLGRRQPTPSGPNRALASPAPPTTIPSHPNPSA 369 P + H SH P L R PTP+ P+ + A P P T P+HP+ A Sbjct: 6 PRTPTPTHPHSHAPPL--PRTPTPAHPH-SHAPPLPRTPTPTHPHSHA 50
>YAE6_SCHPO (Q09847) Hypothetical protein C23D3.06c in chromosome I| Length = 1325 Score = 32.0 bits (71), Expect = 0.82 Identities = 28/87 (32%), Positives = 37/87 (42%), Gaps = 3/87 (3%) Frame = +3 Query: 219 QPAMFGANNPFGQSSASPFGQTSTNPFGTQQG---FGQPSTTNNNPFAPKPFXXXXXXXX 389 Q + FG N FGQ+++ G ++ G + FGQPST P +P Sbjct: 484 QSSAFG-NFKFGQATSFDKGLSTDASSGAKSNTPVFGQPSTFGQAPVFGQP--------- 533 Query: 390 XXXXXXXXFGATSTFGQPSAPAFGATS 470 FG FGQPS AFG +S Sbjct: 534 ------SAFGQAPVFGQPS--AFGQSS 552 Score = 28.5 bits (62), Expect = 9.1 Identities = 21/46 (45%), Positives = 23/46 (50%), Gaps = 4/46 (8%) Frame = +3 Query: 219 QPAMFGANNPFGQSSASPFGQTSTNPFGTQQGFGQPS----TTNNN 344 QP+ FG FGQ SA FGQ FG FGQ S T+N N Sbjct: 520 QPSTFGQAPVFGQPSA--FGQAPV--FGQPSAFGQSSFSFGTSNMN 561
>UBQL2_MOUSE (Q9QZM0) Ubiquilin-2 (Protein linking IAP with cytoskeleton 2)| (PLIC-2) (Ubiquitin-like product Chap1/Dsk2) (DSK2 homolog) (Chap1) Length = 638 Score = 32.0 bits (71), Expect = 0.82 Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 5/82 (6%) Frame = +3 Query: 219 QPAMFGANNPFGQSSASPFGQTSTNPFGTQQGFGQPSTTNN-----NPFAPKPFXXXXXX 383 +P + A FG + + G +ST+ GT QPS T N NP+AP P Sbjct: 288 EPMLNAAQEQFGGNPFATVGSSSTSGEGT-----QPSRTENRDPLPNPWAPPPTTQTAAT 342 Query: 384 XXXXXXXXXXFGATSTFGQPSA 449 G+ S+ +A Sbjct: 343 TTTTTTTSSGSGSGSSSSSTTA 364
>IF2_LEIXX (Q6AG49) Translation initiation factor IF-2| Length = 916 Score = 31.2 bits (69), Expect = 1.4 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 2/46 (4%) Frame = +3 Query: 231 FGANNPFGQSSASPFGQTSTNPFGTQQGFGQ-PSTTN-NNPFAPKP 362 F +N GQ ++P + NPF + QG GQ PS +N P P+P Sbjct: 162 FASNQGMGQRPSAP--RPGNNPFSSSQGMGQRPSPSNIPRPAPPRP 205
>ESAM_MACFA (Q95KI3) Endothelial cell-selective adhesion molecule precursor| Length = 390 Score = 31.2 bits (69), Expect = 1.4 Identities = 16/35 (45%), Positives = 20/35 (57%) Frame = +1 Query: 259 HLPALLGRRQPTPSGPNRALASPAPPTTIPSHPNP 363 H P G PTPS ++AL SP PTT ++P P Sbjct: 323 HGPPRPGALTPTPSLSSQALPSPRLPTTDGANPQP 357
>TMG4_HUMAN (Q9BZD6) Transmembrane gamma-carboxyglutamic acid protein 4| precursor (Proline-rich Gla protein 4) (Proline-rich gamma-carboxyglutamic acid protein 4) Length = 226 Score = 30.8 bits (68), Expect = 1.8 Identities = 14/41 (34%), Positives = 20/41 (48%) Frame = +1 Query: 217 INQPCSALTIHSGSHLPALLGRRQPTPSGPNRALASPAPPT 339 + PCS+ G H P+++ RR P A SP PP+ Sbjct: 146 LQHPCSSAVYERGRHTPSIIFRR------PEEAALSPLPPS 180
>FGD1_HUMAN (P98174) FYVE, RhoGEF and PH domain-containing protein 1| (Faciogenital dysplasia 1 protein) (Zinc finger FYVE domain-containing protein 3) (Rho/Rac guanine nucleotide exchange factor FGD1) (Rho/Rac GEF) Length = 961 Score = 30.8 bits (68), Expect = 1.8 Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%) Frame = +1 Query: 286 QPTPSGPNRALASPAPPTTIPS-HPNP 363 +P P GP R + P PPT PS P+P Sbjct: 124 EPHPEGPQRLRSDPGPPTETPSQRPSP 150
>ENAH_HUMAN (Q8N8S7) Protein enabled homolog| Length = 591 Score = 30.8 bits (68), Expect = 1.8 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 2/60 (3%) Frame = +1 Query: 199 AAAATTINQPCSALTIHSGSHLPALLGRRQP--TPSGPNRALASPAPPTTIPSHPNPSAA 372 AAA ++ P +++ S + P L QP TPS L APP P P P+ A Sbjct: 267 AAAPASVETPLNSVLGDSSASEPGLQAASQPAETPSQQGIVLGPLAPPPPPPLPPGPAQA 326
>GP1_CHLRE (Q9FPQ6) Vegetative cell wall protein gp1 precursor| (Hydroxyproline-rich glycoprotein 1) Length = 555 Score = 30.4 bits (67), Expect = 2.4 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = +1 Query: 289 PTPSGPNRALASPAPPTTIPSHPNP 363 P+P+ P+ A SPAPP+ P P P Sbjct: 46 PSPAPPSPAPPSPAPPSPAPPSPGP 70 Score = 30.0 bits (66), Expect = 3.1 Identities = 14/33 (42%), Positives = 18/33 (54%) Frame = +1 Query: 265 PALLGRRQPTPSGPNRALASPAPPTTIPSHPNP 363 PA P+P+ P+ A SPAPP+ P P P Sbjct: 86 PAPPSPAPPSPAPPSPAPPSPAPPSPAPPSPAP 118 Score = 30.0 bits (66), Expect = 3.1 Identities = 14/33 (42%), Positives = 18/33 (54%) Frame = +1 Query: 265 PALLGRRQPTPSGPNRALASPAPPTTIPSHPNP 363 PA P+P+ P+ A SPAPP+ P P P Sbjct: 81 PAPPSPAPPSPAPPSPAPPSPAPPSPAPPSPAP 113 Score = 29.6 bits (65), Expect = 4.1 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = +1 Query: 289 PTPSGPNRALASPAPPTTIPSHPNP 363 P+P+ P+ A SPAPP+ P P P Sbjct: 79 PSPAPPSPAPPSPAPPSPAPPSPAP 103 Score = 29.6 bits (65), Expect = 4.1 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = +1 Query: 289 PTPSGPNRALASPAPPTTIPSHPNP 363 P+P+ P+ A SPAPP+ P P P Sbjct: 41 PSPAPPSPAPPSPAPPSPAPPSPAP 65 Score = 29.6 bits (65), Expect = 4.1 Identities = 18/54 (33%), Positives = 24/54 (44%) Frame = +1 Query: 202 AAATTINQPCSALTIHSGSHLPALLGRRQPTPSGPNRALASPAPPTTIPSHPNP 363 A + N C I + PA P+P+ P+ A SPAPP+ P P P Sbjct: 22 AFVASANAQCVPGGIFNCPPSPAPPSPAPPSPAPPSPAPPSPAPPSPGPPSPAP 75 Score = 28.9 bits (63), Expect = 6.9 Identities = 16/36 (44%), Positives = 20/36 (55%) Frame = +1 Query: 265 PALLGRRQPTPSGPNRALASPAPPTTIPSHPNPSAA 372 PA P+P+ P+ A SPAPP+ P P PS A Sbjct: 91 PAPPSPAPPSPAPPSPAPPSPAPPSPAPPSP-PSPA 125
>EP15_MOUSE (P42567) Epidermal growth factor receptor substrate 15 (Protein| Eps15) (AF-1p protein) Length = 897 Score = 30.4 bits (67), Expect = 2.4 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 3/45 (6%) Frame = +3 Query: 231 FGANNPFGQSSASPFGQTSTNPFGTQQGFGQPST---TNNNPFAP 356 F ++ F Q+S PF +ST+PF S +N+PFAP Sbjct: 653 FASDCFFKQTSTDPFTTSSTDPFSASSNSSNTSVETWKHNDPFAP 697
>TFE2_RAT (P21677) Transcription factor E2-alpha (Immunoglobulin| enhancer-binding factor E12/E47) (Transcription factor 3) (TCF-3) (Transcription regulator Pan) Length = 649 Score = 30.4 bits (67), Expect = 2.4 Identities = 18/56 (32%), Positives = 24/56 (42%) Frame = +1 Query: 205 AATTINQPCSALTIHSGSHLPALLGRRQPTPSGPNRALASPAPPTTIPSHPNPSAA 372 A T + S T+ LP LG P P P+ +S T+ PS+P AA Sbjct: 108 AYATFGRDTSVGTLSQAGFLPGELGLSSPGPLSPSGVKSSSQYYTSFPSNPRRRAA 163
>UBAP1_RAT (Q5XIS7) Ubiquitin-associated protein 1 (UBAP)| Length = 502 Score = 30.0 bits (66), Expect = 3.1 Identities = 14/40 (35%), Positives = 24/40 (60%) Frame = +1 Query: 232 SALTIHSGSHLPALLGRRQPTPSGPNRALASPAPPTTIPS 351 SAL ++SG+ +PAL + P+ S + +PP+T P+ Sbjct: 322 SALNLNSGTEVPALTSSQMPSLSILSVCTEESSPPSTCPT 361
>BAT3_HUMAN (P46379) Large proline-rich protein BAT3 (HLA-B-associated| transcript 3) (Protein G3) Length = 1132 Score = 30.0 bits (66), Expect = 3.1 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = +1 Query: 289 PTPSGPNRALASPAPPTTIPSHPNPS 366 P P+GP +PAP T P+HP+P+ Sbjct: 254 PAPAGP-----TPAPETNAPNHPSPA 274
>SEC9_DEBHA (Q6BKU3) Protein transport protein SEC9| Length = 490 Score = 30.0 bits (66), Expect = 3.1 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 8/46 (17%) Frame = +3 Query: 237 ANNPFGQSS--ASPFGQ------TSTNPFGTQQGFGQPSTTNNNPF 350 ANNP+G + AS G+ T TNP+G + G+ S + NP+ Sbjct: 111 ANNPYGNGNVGASSRGERAGGRNTQTNPYGGARASGRASGSKPNPY 156
>CAP8_ARATH (Q8LBH2) Putative clathrin assembly protein At2g01600| Length = 571 Score = 29.6 bits (65), Expect = 4.1 Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 15/58 (25%) Frame = +3 Query: 222 PAMFGANNPFGQSSAS---PFGQTSTNPFG------------TQQGFGQPSTTNNNPF 350 P F +++PF S+ + P Q NPFG T Q P T N+NPF Sbjct: 476 PNPFASHDPFASSNGTAPPPQQQAVNNPFGAYQQTYQHQPQPTYQHQSNPPTNNSNPF 533
>RGA7_SCHPO (O94466) Probable Rho-GTPase-activating protein 7| Length = 695 Score = 29.6 bits (65), Expect = 4.1 Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 1/58 (1%) Frame = +1 Query: 202 AAATTINQPCSALTIHSGSHLPALLGRRQPTPSG-PNRALASPAPPTTIPSHPNPSAA 372 ++A N P + TI + +P+ L P PS PN ++ASPA P + S+P+ + A Sbjct: 344 SSAGKTNPPVNP-TIKVTAAIPSPLQNTNPAPSTFPNPSVASPAFPNSSTSNPSTAPA 400
>GDB3_WHEAT (P04730) Gamma-gliadin (Gliadin B-III) (Fragment)| Length = 244 Score = 29.6 bits (65), Expect = 4.1 Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 2/41 (4%) Frame = +1 Query: 256 SHLPALLGRRQPTPSGPNRA--LASPAPPTTIPSHPNPSAA 372 S P L +QP+P P + + SPA PTTIPS P++A Sbjct: 17 SQQPFLQQPQQPSPQ-PQQVVQIISPATPTTIPSAGKPTSA 56
>UBQL2_HUMAN (Q9UHD9) Ubiquilin-2 (Protein linking IAP with cytoskeleton 2)| (PLIC-2) (hPLIC-2) (Ubiquitin-like product Chap1/Dsk2) (DSK2 homolog) (Chap1) Length = 624 Score = 29.3 bits (64), Expect = 5.3 Identities = 20/76 (26%), Positives = 30/76 (39%), Gaps = 5/76 (6%) Frame = +3 Query: 219 QPAMFGANNPFGQSSASPFGQTSTNPFGTQQGFGQPSTTNN-----NPFAPKPFXXXXXX 383 +P + A FG + + G +S++ GTQ PS T N NP+AP P Sbjct: 277 EPMLNAAQEQFGGNPFASVGSSSSSGEGTQ-----PSRTENRDPLPNPWAPPPATQSSAT 331 Query: 384 XXXXXXXXXXFGATST 431 G +S+ Sbjct: 332 TSTTTSTGSGSGNSSS 347
>UBAP1_HUMAN (Q9NZ09) Ubiquitin-associated protein 1 (UBAP)| Length = 502 Score = 29.3 bits (64), Expect = 5.3 Identities = 15/45 (33%), Positives = 24/45 (53%) Frame = +1 Query: 232 SALTIHSGSHLPALLGRRQPTPSGPNRALASPAPPTTIPSHPNPS 366 SAL + SG+ +PAL + P+ S + +PP T P+ P+ Sbjct: 322 SALNLDSGTEMPALTSSQMPSLSVLSVCTEESSPPNTGPTVTPPN 366
>YDC9_SCHPO (Q10172) Hypothetical protein C25G10.09c in chromosome I| Length = 1794 Score = 29.3 bits (64), Expect = 5.3 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = +1 Query: 289 PTPSGPNRALASPAPPTTIPSHPNP 363 P P+GP A P P ++ PS PNP Sbjct: 1722 PMPAGPPSAPPPPLPASSAPSVPNP 1746
>SYN2_HUMAN (Q92777) Synapsin-2 (Synapsin II)| Length = 582 Score = 29.3 bits (64), Expect = 5.3 Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 3/31 (9%) Frame = +1 Query: 289 PTPSGPNRALASPAPPTTIPS---HPNPSAA 372 P P GP A AS APPT P P P++A Sbjct: 37 PPPPGPGAASASAAPPTASPGPERKPPPASA 67
>TNFL6_PIG (Q9BEA8) Tumor necrosis factor ligand superfamily member 6 (Fas| antigen ligand) (Fas ligand) (CD178 antigen) (CD95L protein) [Contains: Tumor necrosis factor ligand superfamily member 6, membrane form; Tumor necrosis factor ligand superfamily m Length = 282 Score = 29.3 bits (64), Expect = 5.3 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = +1 Query: 262 LPALLGRRQPTPSGPNRALASPAPPTTIPSHPNP 363 +P G+R+P P P P PPT +PS P P Sbjct: 36 VPGRPGQRRPPPPPP----PPPPPPTLLPSRPLP 65
>RFA1_HUMAN (P27694) Replication protein A 70 kDa DNA-binding subunit (RP-A)| (RF-A) (Replication factor-A protein 1) (Single-stranded DNA-binding protein) (p70) Length = 616 Score = 29.3 bits (64), Expect = 5.3 Identities = 21/77 (27%), Positives = 28/77 (36%), Gaps = 7/77 (9%) Frame = +3 Query: 261 SASPFGQTSTNPFGTQQGFGQPSTTNNNPFA-------PKPFXXXXXXXXXXXXXXXXFG 419 SA G NP +G GQP P A P+P +G Sbjct: 104 SAEAVGVKIGNPVPYNEGLGQPQVAPPAPAASPAASSRPQP---QNGSSGMGSTVSKAYG 160 Query: 420 ATSTFGQPSAPAFGATS 470 A+ TFG+ + P+ TS Sbjct: 161 ASKTFGKAAGPSLSHTS 177
>NU124_SCHPO (Q09904) Nucleoporin nup124 (Nuclear pore protein nup124)| Length = 1159 Score = 29.3 bits (64), Expect = 5.3 Identities = 21/45 (46%), Positives = 24/45 (53%), Gaps = 2/45 (4%) Frame = +3 Query: 219 QPA-MFGANNPFGQSSASPFG-QTSTNPFGTQQGFGQPSTTNNNP 347 QPA MFG + P SSA FG Q+ TNP G +T NNP Sbjct: 1007 QPASMFGTSTP-APSSAFAFGNQSGTNPAAPAGFGGITNTATNNP 1050
>SMR1_MOUSE (Q61900) Submaxillary gland androgen-regulated protein 1 precursor| (Salivary protein MSG1) Length = 147 Score = 29.3 bits (64), Expect = 5.3 Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 1/31 (3%) Frame = +1 Query: 274 LGRRQPTPSGPNRALASPAPP-TTIPSHPNP 363 +GR P P GP P PP +P HP P Sbjct: 58 IGRPPPPPFGPGIGRPPPPPPCPPVPPHPRP 88
>NU214_HUMAN (P35658) Nuclear pore complex protein Nup214 (Nucleoporin Nup214)| (214 kDa nucleoporin) (CAN protein) Length = 2090 Score = 29.3 bits (64), Expect = 5.3 Identities = 24/82 (29%), Positives = 33/82 (40%) Frame = +3 Query: 225 AMFGANNPFGQSSASPFGQTSTNPFGTQQGFGQPSTTNNNPFAPKPFXXXXXXXXXXXXX 404 ++FGA + SS+ FGQ+S N G FGQ +N F P Sbjct: 1770 SVFGAASSTSSSSSFSFGQSSPNTGGGL--FGQ---SNAPAFGQSPGFGQGGSVFGGTSA 1824 Query: 405 XXXFGATSTFGQPSAPAFGATS 470 ATS F A FG+++ Sbjct: 1825 ATTTAATSGFSFCQASGFGSSN 1846
>AMPH_CHICK (P50478) Amphiphysin| Length = 682 Score = 28.9 bits (63), Expect = 6.9 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 Query: 289 PTPSGPNRALASPAPPTTIPSHPNPSAA 372 P+ SGP R +P+PP + P+P+A+ Sbjct: 249 PSDSGPLRIAKTPSPPEEVSPLPSPTAS 276
>FUS_HUMAN (P35637) RNA-binding protein FUS (Oncogene FUS) (Oncogene TLS)| (Translocated in liposarcoma protein) (POMp75) (75 kDa DNA-pairing protein) Length = 526 Score = 28.9 bits (63), Expect = 6.9 Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 11/81 (13%) Frame = +3 Query: 249 FGQSSASPFGQTSTNPFGTQ---QGFG--------QPSTTNNNPFAPKPFXXXXXXXXXX 395 +GQSS S +GQ+ +GTQ QG+G Q S ++ + P Sbjct: 50 YGQSSYSSYGQSQNTGYGTQSTPQGYGSTGGYGSSQSSQSSYGQQSSYPGYGQQPAPSST 109 Query: 396 XXXXXXFGATSTFGQPSAPAF 458 +S++GQP + ++ Sbjct: 110 SGSYGSSSQSSSYGQPQSGSY 130
>ENAH_MOUSE (Q03173) Protein enabled homolog (NPC-derived proline-rich protein| 1) (NDPP-1) Length = 802 Score = 28.9 bits (63), Expect = 6.9 Identities = 14/26 (53%), Positives = 14/26 (53%) Frame = +1 Query: 289 PTPSGPNRALASPAPPTTIPSHPNPS 366 P PSGP A A P PP P P PS Sbjct: 550 PLPSGPAYASALPPPPGPPPPPPLPS 575
>TNFL6_HUMAN (P48023) Tumor necrosis factor ligand superfamily member 6 (Fas| antigen ligand) (Fas ligand) (CD178 antigen) (CD95L protein) (Apoptosis antigen ligand) (APTL) [Contains: Tumor necrosis factor ligand superfamily member 6, membrane form; Tumor Length = 281 Score = 28.9 bits (63), Expect = 6.9 Identities = 13/34 (38%), Positives = 17/34 (50%) Frame = +1 Query: 262 LPALLGRRQPTPSGPNRALASPAPPTTIPSHPNP 363 +P G+R+P P P L P PP +P P P Sbjct: 36 VPRRPGQRRPPPPPPPPPLPPPPPPPPLPPLPLP 69
>WASIP_RAT (Q6IN36) Wiskott-Aldrich syndrome protein-interacting protein| (WASP-interacting protein) Length = 487 Score = 28.9 bits (63), Expect = 6.9 Identities = 13/33 (39%), Positives = 14/33 (42%) Frame = +1 Query: 265 PALLGRRQPTPSGPNRALASPAPPTTIPSHPNP 363 P + P PS P S APP PS P P Sbjct: 272 PPSQNSKPPVPSTPRPGAGSQAPPPPPPSRPGP 304
>EP15R_MOUSE (Q60902) Epidermal growth factor receptor substrate 15-like 1| (Eps15-related protein) (Eps15R) (Epidermal growth factor receptor pathway substrate 15-related sequence) (Eps15-rs) Length = 907 Score = 28.9 bits (63), Expect = 6.9 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +3 Query: 270 PFGQTSTNPFGTQQGFGQPSTTNNNPFAP 356 P G S PF ++GFG P + +PFAP Sbjct: 814 PLGADSGEPFQNKKGFGDP-FSGKDPFAP 841 Score = 28.5 bits (62), Expect = 9.1 Identities = 16/41 (39%), Positives = 23/41 (56%) Frame = +3 Query: 231 FGANNPFGQSSASPFGQTSTNPFGTQQGFGQPSTTNNNPFA 353 F +++PF SS S G ++PFGT FG S ++ FA Sbjct: 703 FESSDPFSSSSISSKG---SDPFGTLDPFGSSSFSSAEGFA 740
>EP15R_HUMAN (Q9UBC2) Epidermal growth factor receptor substrate 15-like 1| (Eps15-related protein) (Eps15R) Length = 864 Score = 28.9 bits (63), Expect = 6.9 Identities = 14/40 (35%), Positives = 21/40 (52%) Frame = +3 Query: 237 ANNPFGQSSASPFGQTSTNPFGTQQGFGQPSTTNNNPFAP 356 A+ P P G S +PF +++GFG P + +PF P Sbjct: 805 ADFPEAPDPFQPLGADSGDPFQSKKGFGDP-FSGKDPFVP 843
>YETS2_HUMAN (Q9ULM3) YEATS domain-containing protein 2| Length = 1422 Score = 28.5 bits (62), Expect = 9.1 Identities = 17/39 (43%), Positives = 20/39 (51%) Frame = +1 Query: 250 SGSHLPALLGRRQPTPSGPNRALASPAPPTTIPSHPNPS 366 S S PA+L PTP P+ A A+ A T P P PS Sbjct: 1081 STSKPPAILPVAAPTPVVPSSAPAAVAKVKTEPETPGPS 1119
>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich| glycoprotein) Length = 620 Score = 28.5 bits (62), Expect = 9.1 Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 2/41 (4%) Frame = +1 Query: 250 SGSHLPALLGRRQPTPSG--PNRALASPAPPTTIPSHPNPS 366 S HLP +G P P+R P P PSHP PS Sbjct: 81 SHGHLPPSVGGPPPHRGHLPPSRGFNPPPSPVISPSHPPPS 121
>STF1_HORSE (Q9GKL2) Steroidogenic factor 1 (STF-1) (SF-1)| Length = 461 Score = 28.5 bits (62), Expect = 9.1 Identities = 14/39 (35%), Positives = 18/39 (46%) Frame = +1 Query: 253 GSHLPALLGRRQPTPSGPNRALASPAPPTTIPSHPNPSA 369 G H+P G P+GP +PA P +PS P A Sbjct: 143 GLHVPEPKGLASGPPAGPLGDFGAPALPMAVPSTNGPLA 181
>IE18_PRVKA (P33479) Immediate-early protein IE180| Length = 1446 Score = 28.5 bits (62), Expect = 9.1 Identities = 14/35 (40%), Positives = 16/35 (45%) Frame = +1 Query: 268 ALLGRRQPTPSGPNRALASPAPPTTIPSHPNPSAA 372 AL P GP R+ S A P + P PSAA Sbjct: 152 ALAAAEAGAPGGPGRSSPSAASPASSSGSPGPSAA 186
>TTBK1_HUMAN (Q5TCY1) Tau-tubulin kinase 1 (EC 2.7.11.1) (Brain-derived tau| kinase) Length = 1321 Score = 28.5 bits (62), Expect = 9.1 Identities = 16/48 (33%), Positives = 20/48 (41%) Frame = +1 Query: 214 TINQPCSALTIHSGSHLPALLGRRQPTPSGPNRALASPAPPTTIPSHP 357 T P HS H RR+ P+GP R + S APP + P Sbjct: 629 TSQPPTPGSPSHSPLHSGPRPRRRESDPTGPQRQVFSVAPPFEVNGLP 676 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.311 0.124 0.372 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,701,251 Number of Sequences: 219361 Number of extensions: 814990 Number of successful extensions: 3424 Number of sequences better than 10.0: 48 Number of HSP's better than 10.0 without gapping: 2806 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3372 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3072927439 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits)
