Clone Name | bastl02d09 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | TBC2_CHLRE (Q8VXP3) Tbc2 translation factor, chloroplast precursor | 29 | 3.6 |
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>TBC2_CHLRE (Q8VXP3) Tbc2 translation factor, chloroplast precursor| Length = 1115 Score = 28.9 bits (63), Expect = 3.6 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 10/49 (20%) Frame = +3 Query: 117 AATAGLDRISAAGDPRFPIALLAVAAGDG----------DQGTRIAAAA 233 AA AG +AAGD ++ + AAGDG D GT AAA Sbjct: 933 AAPAGASSAAAAGDSPAALSAVPAAAGDGALVPSFMSIDDDGTAAVAAA 981 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 16,560,025 Number of Sequences: 219361 Number of extensions: 140485 Number of successful extensions: 485 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 479 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 484 length of database: 80,573,946 effective HSP length: 60 effective length of database: 67,412,286 effective search space used: 1617894864 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)