>AMY_THECU (P29750) Alpha-amylase precursor (EC 3.2.1.1) (1,4-alpha-D-glucan|
           glucanohydrolase)
          Length = 605

 Score = 49.7 bits (117), Expect = 4e-06
 Identities = 27/65 (41%), Positives = 32/65 (49%)
 Frame = +3

Query: 264 TVTVIFKLPYYTQWGQSLVIAGSAPALGSWSVKQGLSLSPVHQGNALVWCGQVSVAAGFT 443
           TVT  F     T +GQ + + GS P LGSW   QG+ L     G   VW G V + AG  
Sbjct: 505 TVTARFHATVTTWYGQEVAVVGSIPELGSWQPAQGVRLR-TDSGTYPVWSGAVDLPAGVG 563

Query: 444 CEYSY 458
            EY Y
Sbjct: 564 FEYKY 568

>AMYG_NEUCR (P14804) Glucoamylase precursor (EC 3.2.1.3) (Glucan|
           1,4-alpha-glucosidase) (1,4-alpha-D-glucan
           glucohydrolase)
          Length = 626

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
 Frame = +3

Query: 267 VTVIFKLPYYTQWGQSLVIAGSAPALGSWSVKQGLSLS-PVHQGNALVWCGQVSVAAGFT 443
           V V F     T +GQ++ + GS  ALG+W+   G++LS   +  +  +W   +++  G +
Sbjct: 526 VLVTFNEKVTTSYGQTVKVVGSIAALGNWAPASGVTLSAKQYSSSNPLWSTTIALPQGTS 585

Query: 444 CEYSYHVVD 470
            +Y Y VV+
Sbjct: 586 FKYKYVVVN 594

>AMY_STRLM (P09794) Alpha-amylase precursor (EC 3.2.1.1) (1,4-alpha-D-glucan|
           glucanohydrolase)
          Length = 566

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 21/68 (30%), Positives = 31/68 (45%)
 Frame = +3

Query: 255 GKNTVTVIFKLPYYTQWGQSLVIAGSAPALGSWSVKQGLSLSPVHQGNALVWCGQVSVAA 434
           G    +  F +   T WG+++ + G   ALG+W   + L L P       VW   V +AA
Sbjct: 467 GTGQTSASFHVNATTAWGENIYVTGDQAALGNWDPARALKLDPAAYP---VWKLDVPLAA 523

Query: 435 GFTCEYSY 458
           G   +Y Y
Sbjct: 524 GTPFQYKY 531

>AMY_STRGR (P30270) Alpha-amylase precursor (EC 3.2.1.1) (1,4-alpha-D-glucan|
           glucanohydrolase)
          Length = 566

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 21/68 (30%), Positives = 31/68 (45%)
 Frame = +3

Query: 255 GKNTVTVIFKLPYYTQWGQSLVIAGSAPALGSWSVKQGLSLSPVHQGNALVWCGQVSVAA 434
           G    +  F +   T WG+++ + G   ALG+W   + L L P       VW   V +AA
Sbjct: 467 GTGQTSASFHVNATTAWGENIYVTGDQAALGNWDPARALKLDPAAYP---VWKLDVPLAA 523

Query: 435 GFTCEYSY 458
           G   +Y Y
Sbjct: 524 GTPFQYKY 531

>AMYG_ASPOR (P36914) Glucoamylase precursor (EC 3.2.1.3) (Glucan|
           1,4-alpha-glucosidase) (1,4-alpha-D-glucan
           glucohydrolase)
          Length = 612

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
 Frame = +3

Query: 264 TVTVIFKLPYYTQWGQSLVIAGSAPALGSWSVKQGLSL-SPVHQGNALVWCGQVSVAAGF 440
           TV+V F +   T +G+S+ I GS   LGSW+     +L +  +  +  +W G +++ AG 
Sbjct: 511 TVSVTFAVKATTVYGESIKIVGSISQLGSWNPSSATALNADSYTTDNPLWTGTINLPAGQ 570

Query: 441 TCEYSY 458
           + EY +
Sbjct: 571 SFEYKF 576

>K1434_HUMAN (Q9NPB8) Protein KIAA1434|
          Length = 672

 Score = 36.2 bits (82), Expect = 0.043
 Identities = 15/52 (28%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
 Frame = +3

Query: 306 GQSLVIAGSAPALGSWSVKQGLSLSPVHQ-GNALVWCGQVSVAAGFTCEYSY 458
           G+   I GS  ALG+W+ +  ++L P +  G +++W   + ++ G + +Y Y
Sbjct: 17  GEVFAICGSCDALGNWNPQNAVALLPENDTGESMLWKATIVLSRGVSVQYRY 68

>AMY_STRVL (P22998) Alpha-amylase precursor (EC 3.2.1.1) (1,4-alpha-D-glucan|
           glucanohydrolase)
          Length = 569

 Score = 33.5 bits (75), Expect = 0.28
 Identities = 19/60 (31%), Positives = 28/60 (46%)
 Frame = +3

Query: 279 FKLPYYTQWGQSLVIAGSAPALGSWSVKQGLSLSPVHQGNALVWCGQVSVAAGFTCEYSY 458
           F +   T  GQ++ + G+   LG+W+    L L P       VW   V + AG + EY Y
Sbjct: 478 FNVTATTVVGQNIYVTGNRAELGNWAPASALKLDP---ATYPVWKLTVGLPAGTSFEYKY 534

>CDGT_KLEOX (P08704) Cyclomaltodextrin glucanotransferase precursor (EC|
           2.4.1.19) (Cyclodextrin-glycosyltransferase) (CGTase)
          Length = 655

 Score = 32.3 bits (72), Expect = 0.63
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +3

Query: 294 YTQWGQSLVIAGSAPALGSWSVKQGLSLSP 383
           YT  GQS+ I G+ P LG W + + + +SP
Sbjct: 570 YTISGQSVYIIGNIPQLGGWDLTKAVKISP 599

>OR6B1_HUMAN (O95007) Olfactory receptor 6B1 (Olfactory receptor 7-3) (OR7-3)|
          Length = 311

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 15/39 (38%), Positives = 25/39 (64%)
 Frame = +3

Query: 339 ALGSWSVKQGLSLSPVHQGNALVWCGQVSVAAGFTCEYS 455
           ALGSW++  G+SL+ ++  + L +CG  +V   F C+ S
Sbjct: 145 ALGSWAIGFGISLAKIYFISCLSFCGP-NVINHFFCDIS 182

>CDGT_BACS8 (P17692) Cyclomaltodextrin glucanotransferase precursor (EC|
           2.4.1.19) (Cyclodextrin-glycosyltransferase) (CGTase)
           (Raw-starch-digesting amylase)
          Length = 713

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
 Frame = +3

Query: 297 TQWGQSLVIAGSAPALGSWSVKQGLSLSPVHQGNALV-----WCGQVSVAAGFTCEYSY 458
           T  GQ+L + G+   LG+W   +  ++ P++  N +V     W   VSV AG T E+ +
Sbjct: 625 TALGQNLYLTGNVSELGNWDPAK--AIGPMY--NQVVYQYPNWYYDVSVPAGKTIEFKF 679

>CDGT_BAC11 (P30921) Cyclomaltodextrin glucanotransferase precursor (EC|
           2.4.1.19) (Cyclodextrin-glycosyltransferase) (CGTase)
          Length = 713

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
 Frame = +3

Query: 297 TQWGQSLVIAGSAPALGSWSVKQGLSLSPVHQGNALV-----WCGQVSVAAGFTCEYSY 458
           T  GQ++ +AGS   LG+W   +  ++ P++  N ++     W   V+V AG T E+ +
Sbjct: 625 TALGQNVYLAGSVSELGNWDPAK--AIGPLY--NQVIYQYPTWYYDVTVPAGKTIEFKF 679

>CDGT2_BACCI (P43379) Cyclomaltodextrin glucanotransferase precursor (EC|
           2.4.1.19) (Cyclodextrin-glycosyltransferase) (CGTase)
          Length = 713

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
 Frame = +3

Query: 297 TQWGQSLVIAGSAPALGSWSVKQGLSLSPVHQGNALV-----WCGQVSVAAGFTCEYSY 458
           T  GQ++ + GS   LG+W   +  ++ P++  N +V     W   VSV AG T E+ +
Sbjct: 625 TALGQNVYLTGSVSELGNWDPAK--AIGPMY--NQVVYQYPNWYYDVSVPAGKTIEFKF 679

>APBE_CHLMU (Q9PKW2) Thiamine biosynthesis lipoprotein apbE precursor|
          Length = 316

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 10/39 (25%), Positives = 20/39 (51%)
 Frame = +3

Query: 291 YYTQWGQSLVIAGSAPALGSWSVKQGLSLSPVHQGNALV 407
           YY +WG  +  +G  P+  SW++    +   +H  N+ +
Sbjct: 194 YYVEWGGEIKTSGKHPSGRSWAIASSATPEILHLNNSSI 232

>RHO_STRLI (P52157) Transcription termination factor rho (EC 3.6.1.-)|
           (ATP-dependent helicase rho)
          Length = 707

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
 Frame = -1

Query: 440 EAGGDRNLATPDQRVPLVNRA--QGQPLLDAPGPERRRGAGDDEALP 306
           +A   + +  P Q  P VN +  Q  P  DAP   RRR A  D   P
Sbjct: 134 KAAAQQQIEIPGQPTPKVNASAEQAAPADDAPSERRRRRATSDAGSP 180

>QUIA_XANCJ (Q9XD78) Probable quinate dehydrogenase [Pyrroloquinoline-quinone]|
           (EC 1.1.99.25)
          Length = 790

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
 Frame = -1

Query: 434 GGDRNLATPDQRVPLVNRAQGQPLLDAPGP------ERRRGAGDDEALPPLRVVRQL-ED 276
           GG R  A  DQ    +NR+ G+P   +PGP          G G ++ L PL+V  ++   
Sbjct: 159 GGSR-FAALDQ----INRSNGRPAAGSPGPTTPGEIANSDGNGAEDQLTPLQVGEKVFLC 213

Query: 275 HGHRVLPHLFSEQGRRQWR 219
             H  L  L +  G++ WR
Sbjct: 214 TPHNNLIALDASTGKQLWR 232

>RPOD_PSEPU (P52327) RNA polymerase sigma factor rpoD (Sigma-70)|
          Length = 614

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 1/71 (1%)
 Frame = -1

Query: 428 DRNLATPDQRVPLVNRAQGQPLLDAPGPERRRGAGDDEALPPLRVVRQLEDHGHRVLPHL 249
           D N+A P + VP+          +A   E     GDDE  P   + R  +       P  
Sbjct: 170 DDNIAAPTEEVPIPGTKAAAAKEEADDDEEESEGGDDEEEPKAALTRSSQPSVSVRYPSS 229

Query: 248 FSE-QGRRQWR 219
           FS+ QG  + R
Sbjct: 230 FSDHQGPEEKR 240

>GEMI5_HUMAN (Q8TEQ6) Gem-associated protein 5 (Gemin5)|
          Length = 1508

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -1

Query: 332 GAGDDEALPPLRVVRQLEDHGHRVLPHLFS 243
           GAG+    PP RV+ +L  H  RV    FS
Sbjct: 44  GAGESPGTPPFRVIGELVGHTERVSGFTFS 73

>MUTH_ECOL6 (Q8FEA9) DNA mismatch repair protein mutH (Methyl-directed mismatch|
           repair protein)
          Length = 228

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
 Frame = -1

Query: 467 HHMVAVLTCEAGGDRNLATPDQRVPLVNRAQGQPLLDAPGPERRRGAGDD-EALPPLRVV 291
           H +  VL     G+R+       +PL  R  G PLL +P  E  R   +D E L  + V+
Sbjct: 114 HKLKRVLWIPVEGERS-------IPLAKRRVGSPLLWSPNEEEDRQLREDWEELMDMIVL 166

Query: 290 RQLE 279
            Q+E
Sbjct: 167 GQIE 170

>LEUD1_DEIRA (Q9RTY5) 3-isopropylmalate dehydratase small subunit 1 (EC|
           4.2.1.33) (Isopropylmalate isomerase 1) (Alpha-IPM
           isomerase 1) (IPMI 1)
          Length = 177

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -1

Query: 86  GDVNDGGRAWGSGTCEPR*PEGLKK 12
           GDV  GGR WG G+     P+ LKK
Sbjct: 50  GDVLIGGRNWGLGSSREYAPQALKK 74


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,967,329
Number of Sequences: 219361
Number of extensions: 1130449
Number of successful extensions: 4642
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4636
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3072927439
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)