>dbj|AK069204.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023009C12, full
           insert sequence
          Length = 2803

 Score =  127 bits (64), Expect = 4e-26
 Identities = 112/128 (87%)
 Strand = Plus / Plus

                                                                       
Query: 373 tccctcaagctaagggagaatgcacttgttgggagacgctatgaatcgagtgctgcagca 432
           ||||||||||| ||||||  | | |||||||| || || |||||||||||||||||||||
Sbjct: 371 tccctcaagctgagggagggttcccttgttggcaggcgatatgaatcgagtgctgcagca 430

                                                                       
Query: 433 gttgattcatctgatgcgccacctgccgagaagtttgagtatcaggctgaggtcaatagg 492
           |||||||| |||||| |||||||||  ||||||  |||||| ||||| ||||||||||||
Sbjct: 431 gttgattcttctgatacgccacctgtggagaagcatgagtaccaggcagaggtcaatagg 490

                   
Query: 493 ctcatgga 500
           ||||||||
Sbjct: 491 ctcatgga 498



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                 
Query: 315 gaagaggttgctctctgtgcttgcggctcccaagctta 352
           |||||||||||||||||||||||| || ||||||||||
Sbjct: 313 gaagaggttgctctctgtgcttgctgcgcccaagctta 350



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 136 atgctcggggcctcgaggcg 155
           ||||||||||||||||||||
Sbjct: 137 atgctcggggcctcgaggcg 156

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 97/113 (85%)
 Strand = Plus / Minus

                                                                            
Query: 373      tccctcaagctaagggagaatgcacttgttgggagacgctatgaatcgagtgctgcagca 432
                ||||||||||| ||||||  | | |||||||| || || |||||||||||||||||||||
Sbjct: 19967782 tccctcaagctgagggagggttcccttgttggcaggcgatatgaatcgagtgctgcagca 19967723

                                                                     
Query: 433      gttgattcatctgatgcgccacctgccgagaagtttgagtatcaggctgaggt 485
                |||||||| |||||| |||||||||  ||||||  |||||| ||||| |||||
Sbjct: 19967722 gttgattcttctgatacgccacctgtggagaagcatgagtaccaggcagaggt 19967670



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                      
Query: 315      gaagaggttgctctctgtgcttgcggctcccaagctta 352
                |||||||||||||||||||||||| || ||||||||||
Sbjct: 19967840 gaagaggttgctctctgtgcttgctgcgcccaagctta 19967803



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 33     cctcgcatcgtcgtcttcctcg 54
              ||||||||||||||||||||||
Sbjct: 471113 cctcgcatcgtcgtcttcctcg 471092



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 136      atgctcggggcctcgaggcg 155
                ||||||||||||||||||||
Sbjct: 19968374 atgctcggggcctcgaggcg 19968355

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 97/113 (85%)
 Strand = Plus / Minus

                                                                            
Query: 373      tccctcaagctaagggagaatgcacttgttgggagacgctatgaatcgagtgctgcagca 432
                ||||||||||| ||||||  | | |||||||| || || |||||||||||||||||||||
Sbjct: 19893996 tccctcaagctgagggagggttcccttgttggcaggcgatatgaatcgagtgctgcagca 19893937

                                                                     
Query: 433      gttgattcatctgatgcgccacctgccgagaagtttgagtatcaggctgaggt 485
                |||||||| |||||| |||||||||  ||||||  |||||| ||||| |||||
Sbjct: 19893936 gttgattcttctgatacgccacctgtggagaagcatgagtaccaggcagaggt 19893884



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                      
Query: 315      gaagaggttgctctctgtgcttgcggctcccaagctta 352
                |||||||||||||||||||||||| || ||||||||||
Sbjct: 19894054 gaagaggttgctctctgtgcttgctgcgcccaagctta 19894017



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 33     cctcgcatcgtcgtcttcctcg 54
              ||||||||||||||||||||||
Sbjct: 471113 cctcgcatcgtcgtcttcctcg 471092



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 136      atgctcggggcctcgaggcg 155
                ||||||||||||||||||||
Sbjct: 19894588 atgctcggggcctcgaggcg 19894569

>emb|AL731888.5|CNS08C8S Oryza sativa chromosome 12, . BAC OJ1118_C12 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 165433

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 97/113 (85%)
 Strand = Plus / Plus

                                                                         
Query: 373   tccctcaagctaagggagaatgcacttgttgggagacgctatgaatcgagtgctgcagca 432
             ||||||||||| ||||||  | | |||||||| || || |||||||||||||||||||||
Sbjct: 59478 tccctcaagctgagggagggttcccttgttggcaggcgatatgaatcgagtgctgcagca 59537

                                                                  
Query: 433   gttgattcatctgatgcgccacctgccgagaagtttgagtatcaggctgaggt 485
             |||||||| |||||| |||||||||  ||||||  |||||| ||||| |||||
Sbjct: 59538 gttgattcttctgatacgccacctgtggagaagcatgagtaccaggcagaggt 59590



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                   
Query: 315   gaagaggttgctctctgtgcttgcggctcccaagctta 352
             |||||||||||||||||||||||| || ||||||||||
Sbjct: 59420 gaagaggttgctctctgtgcttgctgcgcccaagctta 59457



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 136   atgctcggggcctcgaggcg 155
             ||||||||||||||||||||
Sbjct: 58886 atgctcggggcctcgaggcg 58905

>gb|AC113172.2| Homo sapiens chromosome 3 clone RP11-739J4, complete sequence
          Length = 149634

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 461    agaagtttgagtatcaggctgaggtc 486
              ||||||||||||||||||||| ||||
Sbjct: 107880 agaagtttgagtatcaggctgtggtc 107905

>gb|AC012467.9| Homo sapiens chr3 BAC RP11-884K10 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 177072

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 461   agaagtttgagtatcaggctgaggtc 486
             ||||||||||||||||||||| ||||
Sbjct: 28463 agaagtttgagtatcaggctgtggtc 28488

>emb|BX000492.1|CNS08CDI Oryza sativa chromosome 12, . BAC OSJNBa0024J08 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 141089

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 33    cctcgcatcgtcgtcttcctcg 54
             ||||||||||||||||||||||
Sbjct: 75659 cctcgcatcgtcgtcttcctcg 75680

>emb|AL133215.17| Human DNA sequence from clone RP11-108L7 on chromosome 10 Contains the
             3' end of the C10orf6 gene for chromosome 10 open reading
             frame 6, the SEMA4G gene for sema domain immunoglobulin
             domain (Ig) transmembrane domain (TM) and short
             cytoplasmic domain (semaphorin) 4G, the MRPL43 gene for
             mitochondrial ribosomal protein L43, the C10orf2 gene for
             chromosome 10 open reading frame 2, the gene for a novel
             protein (KIAA1813) (LAPSER1), a novel gene, the gene for a
             novel protein (FLJ23209 FLJ00011), the gene for a novel
             tricarboxylate carrier domain containing protein (FLJ34185
             FLJ35692), the gene for a novel kazal-type serine protease
             inhibitor domain and immunoglobulin domain containing
             protein (FKSG28) (FKSG4), the 3' end of a novel gene and
             six CpG islands, complete sequence
          Length = 181086

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 106   tgggaggagaaccagcagagcgcag 130
             |||||||||||||||||||| ||||
Sbjct: 99620 tgggaggagaaccagcagagggcag 99644

>emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete genome; segment 17/29
          Length = 248550

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 59     gcccacctgcgcgagcgcgcc 79
              |||||||||||||||||||||
Sbjct: 170868 gcccacctgcgcgagcgcgcc 170848

>gb|BT024056.1| Zea mays clone EL01N0440A11 mRNA sequence
          Length = 2511

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 457 gccgagaagtttgagtatcaggctgaggt 485
           ||||||||||||||||  |||||||||||
Sbjct: 74  gccgagaagtttgagttccaggctgaggt 102

>gb|AY103537.1| Zea mays PCO098403 mRNA sequence
          Length = 2806

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 457 gccgagaagtttgagtatcaggctgaggt 485
           ||||||||||||||||  |||||||||||
Sbjct: 304 gccgagaagtttgagttccaggctgaggt 332

>ref|XM_815605.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053508707.30) partial mRNA
          Length = 3141

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 422 gtgctgcagcagttgattca 441
           ||||||||||||||||||||
Sbjct: 241 gtgctgcagcagttgattca 260

>ref|XM_804167.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053507037.89) partial mRNA
          Length = 617

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 422 gtgctgcagcagttgattca 441
           ||||||||||||||||||||
Sbjct: 241 gtgctgcagcagttgattca 260

>gb|AC154722.2| Mus musculus BAC clone RP24-371J2 from chromosome 9, complete sequence
          Length = 186951

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 310   ggagggaagaggttgctctc 329
             ||||||||||||||||||||
Sbjct: 56974 ggagggaagaggttgctctc 56993

>gb|AC163289.4| Mus musculus BAC clone RP23-269K2 from chromosome 9, complete sequence
          Length = 202378

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 310    ggagggaagaggttgctctc 329
              ||||||||||||||||||||
Sbjct: 136131 ggagggaagaggttgctctc 136150

>gb|AC009506.5| Homo sapiens BAC clone RP11-542H1 from 2, complete sequence
          Length = 191764

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 428    cagcagttgattcatctgat 447
              ||||||||||||||||||||
Sbjct: 122062 cagcagttgattcatctgat 122043

>gb|AC006159.3|AC006159 Homo sapiens BAC clone CTB-11K1 from 7q22-q32, complete sequence
          Length = 92125

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 478   gctgaggtcaataggctcat 497
             ||||||||||||||||||||
Sbjct: 32189 gctgaggtcaataggctcat 32170

>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 434     ttgattcatctgatgcgcca 453
               ||||||||||||||||||||
Sbjct: 1072191 ttgattcatctgatgcgcca 1072210

>emb|AJ133269.1|HSA133269 Homo sapiens caveolin-1/-2 locus, Contig1, D7S522, genes CAV2 (exons 1,
              2a, and 2b), CAV1 (exons 1 and 2)
          Length = 190537

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 478    gctgaggtcaataggctcat 497
              ||||||||||||||||||||
Sbjct: 183835 gctgaggtcaataggctcat 183816

>gb|AF095592.1|CAVEOLHS2 Homo sapiens caveolin-1 gene, exon 2
          Length = 1442

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 478  gctgaggtcaataggctcat 497
            ||||||||||||||||||||
Sbjct: 1155 gctgaggtcaataggctcat 1136


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,619,405
Number of Sequences: 3902068
Number of extensions: 2619405
Number of successful extensions: 47731
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 47566
Number of HSP's gapped (non-prelim): 165
length of query: 500
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 478
effective length of database: 17,147,199,772
effective search space: 8196361491016
effective search space used: 8196361491016
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)