>TEAD2_MOUSE (P48301) Transcriptional enhancer factor TEF-4 (TEA domain family|
           member 2) (TEAD-2) (Embryonic TEA domain-containing
           factor) (ETF) (ETEF-1)
          Length = 445

 Score = 32.0 bits (71), Expect = 0.85
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
 Frame = -3

Query: 129 KANLQAFVVKAEPHSFSIIRNWTSANWG---EAAGSS 28
           K  L+    +  PH+F +++ W   NWG   E AGSS
Sbjct: 282 KGGLRELYDRGPPHAFFLVKFWADLNWGPSAEEAGSS 318

>DMD_CAEEL (Q9TW65) Dystrophin-1|
          Length = 3674

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = +1

Query: 301  SDPLLAFLLDEVVIKDWCKRAVKALISEIGMIYKSGLETMKSKLSQMQK 447
            ++P L   LDEVV   WC+ A K     +  +   GLE +  +L+Q  K
Sbjct: 2176 TEPELKLELDEVV--RWCEMAEKEAAQNVNSLDGDGLEKLDGRLAQFTK 2222

>TARA_MOUSE (Q99KW3) TRIO and F-actin-binding protein (Protein Tara)|
            (Trio-associated repeat on actin)
          Length = 2014

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 3/105 (2%)
 Frame = +1

Query: 97   RLYHKCLEVGLISKQHDER---FQEKEGHGDRVNMDVQRLHSLLDVALQNNLVSLICHYI 267
            R   KCLE+G +++Q +ER    +  +  G  +    Q LHS L   +      +     
Sbjct: 1858 RYSQKCLEIGALTRQAEEREHTLRRCQQEGQELLRHNQELHSHLSEEIDRLRSFIASQGT 1917

Query: 268  TDVCLDENAVSSDPLLAFLLDEVVIKDWCKRAVKALISEIGMIYK 402
             + C   N  SS  L   L  +     + K+ V+ L  E+ +I K
Sbjct: 1918 GNSCGRSNERSSCELEVLLRVKENELQYLKKEVQCLRDELQVIQK 1962

>GIDA_BACLD (Q65CN2) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gidA (Glucose-inhibited division protein A)
          Length = 628

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 15/42 (35%), Positives = 27/42 (64%)
 Frame = +1

Query: 94  LRLYHKCLEVGLISKQHDERFQEKEGHGDRVNMDVQRLHSLL 219
           LRL     ++GLIS++  ++FQEK+     +  + +RLHS++
Sbjct: 446 LRLTEIGYQIGLISEERYQKFQEKKA---AIEAEKKRLHSVI 484

>GIDA_PELUB (Q4FNR6) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gidA (Glucose-inhibited division protein A)
          Length = 623

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 12/24 (50%), Positives = 20/24 (83%)
 Frame = +1

Query: 97  RLYHKCLEVGLISKQHDERFQEKE 168
           RL +K +E+GLISK+ ++ F++KE
Sbjct: 446 RLTNKGIEIGLISKEREDIFKDKE 469

>DYI3_CHLRE (P27766) Dynein, 70 kDa intermediate chain, flagellar outer arm|
           (IC69) (IC70)
          Length = 567

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
 Frame = +1

Query: 118 EVGLISKQHDERFQEK-EGHGDRVNMDVQRLHSLLDVALQNNLVSLICHYITDVCLDENA 294
           +V     +H  R+++K E   D +   VQ   S+ D+  QNN V +   Y T+V +D  +
Sbjct: 84  DVDYTEAEHTIRYRKKVEKDEDYIRTVVQLGSSVEDLIKQNNAVDIYQEYFTNVTMDHTS 143

>PPARB_XENLA (P37233) Peroxisome proliferator-activated receptor beta|
           (PPAR-beta)
          Length = 396

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = -1

Query: 389 PISDMSALTALLHQSLMTTSSKRKARSGSLDTAFSSKQTSVI 264
           P+SD+  L+ L+H S M T +  K R+  + T  +S    VI
Sbjct: 127 PVSDLDVLSQLIHSSYMNTFTMTKKRARDILTGRNSISPFVI 168

>TEAD2_HUMAN (Q15562) Transcriptional enhancer factor TEF-4 (TEA domain family|
           member 2) (TEAD-2)
          Length = 447

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
 Frame = -3

Query: 129 KANLQAFVVKAEPHSFSIIRNWTSANW---GEAAGS 31
           K  L+    +  PH+F +++ W   NW   GE AG+
Sbjct: 282 KGGLRELYDRGPPHAFFLVKFWADLNWGPSGEEAGA 317

>CN050_RAT (Q68FW6) Protein C14orf50 homolog|
          Length = 411

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
 Frame = +1

Query: 160 EKEGHGDRVNMDVQRLHSLLDVALQNNLVSLICHYIT---DVCLDENAVSSDPLLAFLLD 330
           EK G    V +D  +  +LL  +LQ+  +  +C + T   +  LD   ++    L++ L+
Sbjct: 98  EKRGQQGNVTLDDVKFVALL--SLQDTEMQRVCSFTTFMRNKSLDSFLMALLYYLSYYLE 155

Query: 331 EVVIKDWCKRAVKALISEIGMIYKSGLETMKSKLSQMQKFAVQ 459
            + ++       K     +G++ K  +E + SKL   QK+  Q
Sbjct: 156 RLSMEK------KPQSYMVGLVEKKEIELVMSKLEDAQKYLAQ 192

>GIDA_BACHD (Q9RCA8) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gidA (Glucose-inhibited division protein A)
          Length = 632

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 16/41 (39%), Positives = 26/41 (63%)
 Frame = +1

Query: 94  LRLYHKCLEVGLISKQHDERFQEKEGHGDRVNMDVQRLHSL 216
           LRL  K  E+GLI+++  ERF EK+    ++  + +RL S+
Sbjct: 446 LRLTEKGYEIGLIARERYERFCEKKA---QIAAEKKRLESI 483

>NHR14_CAEEL (O02151) Nuclear hormone receptor family member nhr-14|
          Length = 435

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 29/135 (21%), Positives = 57/135 (42%), Gaps = 8/135 (5%)
 Frame = +1

Query: 73  DNGKRVRLRLYHKCLEVGL----ISKQHDE----RFQEKEGHGDRVNMDVQRLHSLLDVA 228
           D+    R   + KCL  G+    I  + D     + +++ G     N D +   S     
Sbjct: 67  DHRNACRYCRFQKCLADGMKPEAIQNERDRIGSTKRRKRSGANSENNSDSEGTPSPKIEV 126

Query: 229 LQNNLVSLICHYITDVCLDENAVSSDPLLAFLLDEVVIKDWCKRAVKALISEIGMIYKSG 408
           + N++   +   + D+  +    S+  + A L DE  +K+  +RAV  LI    M++   
Sbjct: 127 MGNSVSRKLIEMLLDI--EHRLASNQSMNALLRDESEMKNSRQRAVNYLIGWTNMLHPLP 184

Query: 409 LETMKSKLSQMQKFA 453
              +  K+  ++KF+
Sbjct: 185 EVPLADKVLLLKKFS 199

>PARE_BORBU (Q59189) DNA topoisomerase 4 subunit B (EC 5.99.1.-) (Topoisomerase|
           IV subunit B)
          Length = 599

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +1

Query: 88  VRLRLYH-KCLEVGLISKQHDERFQEKEGHGDRVNMDVQRLHSLLDV 225
           ++ R +H  CL  GLI   +D+ F+ K G  D +N +++    L D+
Sbjct: 181 LKRRFFHYACLNKGLIINYNDQIFESKNGLLDFLNSEIKSDDLLYDI 227

>LNT1_LEPIN (Q8F724) Apolipoprotein N-acyltransferase 1 (EC 2.3.1.-) (ALP|
           N-acyltransferase 1)
          Length = 576

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 12/41 (29%), Positives = 24/41 (58%)
 Frame = +2

Query: 209 IPCLMLHFRIIWFP*SATI*QMFVWMRMLCQVIHFWLFFWM 331
           I C+ L F +       +I + F+W+ +L Q+++F  F+W+
Sbjct: 43  ISCIFLFFSLN----RTSIWKAFLWLLILSQILNFTAFYWI 79

>LNT1_LEPIC (Q72PB6) Apolipoprotein N-acyltransferase 1 (EC 2.3.1.-) (ALP|
           N-acyltransferase 1)
          Length = 576

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 12/41 (29%), Positives = 24/41 (58%)
 Frame = +2

Query: 209 IPCLMLHFRIIWFP*SATI*QMFVWMRMLCQVIHFWLFFWM 331
           I C+ L F +       +I + F+W+ +L Q+++F  F+W+
Sbjct: 43  ISCIFLFFSLN----RTSIWKAFLWLLILSQILNFTAFYWI 79

>NU4M_SALSA (Q9ZZM4) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 4)
          Length = 460

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
 Frame = +2

Query: 209 IPCLMLHFRIIWFP*SATI*QMFVWMRMLCQ--VIHFWLFFWMRWSSRTG 352
           IP LML F  IWF  +      ++W   + Q  VI      W++WSS TG
Sbjct: 6   IPTLML-FPTIWFSPAK-----WLWTTSIAQSLVIALASLSWLKWSSETG 49

>TARA_HUMAN (Q9H2D6) TRIO and F-actin-binding protein (Protein Tara)|
            (Trio-associated repeat on actin)
          Length = 2365

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 3/101 (2%)
 Frame = +1

Query: 109  KCLEVGLISKQHDER---FQEKEGHGDRVNMDVQRLHSLLDVALQNNLVSLICHYITDVC 279
            KCLE+G + +Q +ER    +  +  G  +    Q LH  L   +      +    + + C
Sbjct: 2212 KCLEIGALMRQAEEREHTLRRCQQEGQELLRHNQELHGRLSEEIDQLRGFIASQGMGNGC 2271

Query: 280  LDENAVSSDPLLAFLLDEVVIKDWCKRAVKALISEIGMIYK 402
               N  SS  L   L  +     + K+ V+ L  E+ M+ K
Sbjct: 2272 GRSNERSSCELEVLLRVKENELQYLKKEVQCLRDELQMMQK 2312


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,152,251
Number of Sequences: 219361
Number of extensions: 1426379
Number of successful extensions: 3786
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3782
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3188886965
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)