Clone Name | bastl02c03 |
---|---|
Clone Library Name | barley_pub |
>AQP_CICVR (Q23808) Aquaporin AQPcic| Length = 255 Score = 32.3 bits (72), Expect = 0.71 Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 7/69 (10%) Frame = -3 Query: 250 VVRIGVFRGVLIAVRFFLHLLGQLPECF---ARTAGLIVVGHVSL*RTSYY----CSSAR 92 VVRI + G +IA + +G + C A T GL+V GH+S+ + +Y C A Sbjct: 58 VVRIALTFGFIIAT--MVQCIGHVSGCHINPAVTCGLLVTGHISILKAIFYIIVQCVGAI 115 Query: 91 AADAHLPLI 65 A A L +I Sbjct: 116 AGSAILKVI 124
>AMY1_DICTH (P09961) Alpha-amylase 1 (EC 3.2.1.1) (1,4-alpha-D-glucan| glucanohydrolase) Length = 685 Score = 30.0 bits (66), Expect = 3.5 Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%) Frame = -3 Query: 484 ENAPELNRVPL-DYFFVHRWIPVGVHFNKFLL 392 E A E++ PL ++FF H P+ VHF+ FLL Sbjct: 24 ERAYEMSYKPLINFFFKHPDFPINVHFSGFLL 55
>HAL4_SCHPO (O14019) Serine/threonine-protein kinase hal4 (EC 2.7.11.1)| (Halotolerence protein 4) Length = 636 Score = 29.6 bits (65), Expect = 4.6 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +2 Query: 86 SSTGRGAVVASSSERNMAHNDEAGGSGKA 172 S TGRGA VA++ E N E GG+ + Sbjct: 224 SRTGRGAAVANTEETNSTGGSETGGAANS 252
>GLMM_LISMO (Q8Y5E6) Phosphoglucosamine mutase (EC 5.4.2.10)| Length = 450 Score = 29.6 bits (65), Expect = 4.6 Identities = 21/59 (35%), Positives = 28/59 (47%) Frame = +2 Query: 95 GRGAVVASSSERNMAHNDEAGGSGKAFWELSQEMEEEPHRYEDAAEDTDPDYTTPSGVG 271 G A V S+ N ++ G ++LS + EEE + D AEDT P PSG G Sbjct: 91 GASASVMISASHNPVDDNGIKFFGSDGFKLSDDQEEEIEQLLDTAEDTLP---RPSGEG 146
>GLMM_LISMF (Q71XP5) Phosphoglucosamine mutase (EC 5.4.2.10)| Length = 450 Score = 29.6 bits (65), Expect = 4.6 Identities = 21/59 (35%), Positives = 28/59 (47%) Frame = +2 Query: 95 GRGAVVASSSERNMAHNDEAGGSGKAFWELSQEMEEEPHRYEDAAEDTDPDYTTPSGVG 271 G A V S+ N ++ G ++LS + EEE + D AEDT P PSG G Sbjct: 91 GASASVMISASHNPVDDNGIKFFGSDGFKLSDDQEEEIEQLLDTAEDTLP---RPSGEG 146
>GLMM_LISIN (Q929Q1) Phosphoglucosamine mutase (EC 5.4.2.10)| Length = 450 Score = 29.6 bits (65), Expect = 4.6 Identities = 21/59 (35%), Positives = 28/59 (47%) Frame = +2 Query: 95 GRGAVVASSSERNMAHNDEAGGSGKAFWELSQEMEEEPHRYEDAAEDTDPDYTTPSGVG 271 G A V S+ N ++ G ++LS + EEE + D AEDT P PSG G Sbjct: 91 GASASVMISASHNPVDDNGIKFFGSDGFKLSDDQEEEIEQLLDTAEDTLP---RPSGEG 146
>ZN575_MACFA (Q9GM03) Zinc finger protein 575| Length = 260 Score = 29.3 bits (64), Expect = 6.0 Identities = 17/44 (38%), Positives = 19/44 (43%), Gaps = 11/44 (25%) Frame = -2 Query: 230 PRRPHSGEVLPPS---PGTA--------PRMLCPNRRPHRCGPC 132 P PH G + PS PG PR P +RPHRC C Sbjct: 40 PPAPHQGPLQKPSQSAPGPTASASAPPRPRRRPPPQRPHRCPDC 83
>YQDA_CAEEL (Q09268) Hypothetical RING finger protein C32D5.10 in chromosome II| Length = 610 Score = 28.9 bits (63), Expect = 7.8 Identities = 14/58 (24%), Positives = 30/58 (51%) Frame = +2 Query: 74 KMSISSTGRGAVVASSSERNMAHNDEAGGSGKAFWELSQEMEEEPHRYEDAAEDTDPD 247 +++ SS G G+ + S+ + +D+ G + +E +EP Y ++ ED+D + Sbjct: 428 ELTTSSAGAGSARSRGSDSVVEIDDDDDNDGVDVDDDDREDSDEPRTYSNSEEDSDEE 485
>DMP1_MOUSE (O55188) Dentin matrix acidic phosphoprotein 1 precursor (Dentin| matrix protein 1) (DMP-1) (AG1) Length = 503 Score = 28.9 bits (63), Expect = 7.8 Identities = 21/90 (23%), Positives = 31/90 (34%) Frame = +2 Query: 98 RGAVVASSSERNMAHNDEAGGSGKAFWELSQEMEEEPHRYEDAAEDTDPDYTTPSGVGDY 277 RG + S+S + + E S + SQE E ED+ E DP + G+ Sbjct: 274 RGELTDSNSRETQSDSTEDTASKEESRSESQEDTAESQSQEDSPEGQDPSSESSEEAGEP 333 Query: 278 XXXXXXXXXXXXXXXXRTHGSESKSQRKDQ 367 R ++ SQ DQ Sbjct: 334 SQESSSESQEGVTSESRGDNPDNTSQTGDQ 363
>GPRS_DROME (O61366) Serine-enriched protein| Length = 1302 Score = 28.9 bits (63), Expect = 7.8 Identities = 15/41 (36%), Positives = 19/41 (46%) Frame = -2 Query: 245 QDRCLPRRPHSGEVLPPSPGTAPRMLCPNRRPHRCGPCFAL 123 Q R P P SG P P T+P + P P R P F++ Sbjct: 461 QGRRSPLFPSSGLRSPNDPMTSPTVRSPTGEPRRSSPTFSV 501 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 64,768,790 Number of Sequences: 219361 Number of extensions: 1202547 Number of successful extensions: 3961 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 3805 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3958 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3478785780 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)