ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl02b10 |
|---|---|
| Clone Library Name | barley_pub |
>EVL_PONPY (Q5R896) Ena/VASP-like protein (Ena/vasodilator stimulated| phosphoprotein-like) Length = 422 Score = 32.7 bits (73), Expect = 0.42 Identities = 13/21 (61%), Positives = 15/21 (71%) Frame = +1 Query: 130 ASKAESPVSCSAPTPPKPSPV 192 +S A +PVSCS P PP P PV Sbjct: 176 SSAASAPVSCSGPPPPPPPPV 196
>EVL_HUMAN (Q9UI08) Ena/VASP-like protein (Ena/vasodilator stimulated| phosphoprotein-like) Length = 416 Score = 32.7 bits (73), Expect = 0.42 Identities = 13/21 (61%), Positives = 15/21 (71%) Frame = +1 Query: 130 ASKAESPVSCSAPTPPKPSPV 192 +S A +PVSCS P PP P PV Sbjct: 170 SSAASAPVSCSGPPPPPPPPV 190
>FTSK_STRCO (O86810) DNA translocase ftsK| Length = 917 Score = 32.0 bits (71), Expect = 0.71 Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 2/56 (3%) Frame = +1 Query: 124 KMASKAESPVSCSAP--TPPKPSPVGVDEMRAVARKFADQPVQNPEPGVWAVLTAI 285 K A+ A+ PV +A P K +P +A ARK A QP NP GV+ ++ A+ Sbjct: 15 KAAAPAKGPVKKAAAKKAPAKRAPA----KKAAARKPAPQPAPNPTNGVYRLVRAL 66
>HESX1_MOUSE (Q61658) Homeobox expressed in ES cells 1 (Homeobox protein ANF)| (Anterior-restricted homeobox protein) (Rathke's pouch homeo box) Length = 185 Score = 32.0 bits (71), Expect = 0.71 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 4/47 (8%) Frame = +3 Query: 288 QESPPPLRG----DEHSFEC*RAHPRPHDRQPSLQDFCCVSQWESLQ 416 ++ PPL E SF C HPRP +R P +++ S+ SL+ Sbjct: 54 KDGNPPLHAPDLPSETSFPCPVDHPRPEERAPKYENYFSASETRSLK 100
>LPXD_SYNEL (Q8DMS9) UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase| (EC 2.3.1.-) Length = 338 Score = 31.2 bits (69), Expect = 1.2 Identities = 16/43 (37%), Positives = 23/43 (53%) Frame = +1 Query: 313 GMNILLNADEHILGRTTDNPRFRISAVSVSGNHCKIYRDTVIG 441 G +++L A+ I T R RI +V +HC +Y D VIG Sbjct: 106 GADVVLGAEVTIGAYTVIGDRVRIGDRTVIDSHCTLYDDVVIG 148
>RB87F_DROME (P48810) Heterogeneous nuclear ribonucleoprotein 87F (HRP36.1| protein) (Protein P11) Length = 385 Score = 30.4 bits (67), Expect = 2.1 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = -2 Query: 100 RSGGRPAAEERAGMAGEWGARRCEWGGGSW 11 R+GGR +R G WG + + GGG+W Sbjct: 209 RAGGRGGQGDRGQGGGGWGGQNRQNGGGNW 238
>DIP2A_HUMAN (Q14689) Disco-interacting protein 2 homolog A| Length = 1571 Score = 29.6 bits (65), Expect = 3.5 Identities = 14/46 (30%), Positives = 25/46 (54%) Frame = -1 Query: 329 KRMFIPSERRRAFLEMAVRTAQTPGSGFCTGWSANLRATARISSTP 192 ++M +PS+RR + +V T P + + +LR R++STP Sbjct: 111 RKMPMPSKRRSVLVHSSVETYTPPDTSSASEDEGSLRRPGRLTSTP 156
>DAAA_STAES (Q8CS41) D-alanine aminotransferase (EC 2.6.1.21) (D-aspartate| aminotransferase) (D-amino acid aminotransferase) (D-amino acid transaminase) (DAAT) Length = 282 Score = 29.6 bits (65), Expect = 3.5 Identities = 20/68 (29%), Positives = 33/68 (48%) Frame = +1 Query: 130 ASKAESPVSCSAPTPPKPSPVGVDEMRAVARKFADQPVQNPEPGVWAVLTAISKKARLRS 309 A++ +P + S PTPP V + K D+P + E GV+A+ T + R Sbjct: 92 ATRGAAPRNHSFPTPP------VKPVIMAFTKSYDRPYEELEQGVYAITTEDIRWLRCDI 145 Query: 310 EGMNILLN 333 + +N+L N Sbjct: 146 KSLNLLGN 153
>DAAA_STAEQ (Q5HNG0) D-alanine aminotransferase (EC 2.6.1.21) (D-aspartate| aminotransferase) (D-amino acid aminotransferase) (D-amino acid transaminase) (DAAT) Length = 282 Score = 29.6 bits (65), Expect = 3.5 Identities = 20/68 (29%), Positives = 33/68 (48%) Frame = +1 Query: 130 ASKAESPVSCSAPTPPKPSPVGVDEMRAVARKFADQPVQNPEPGVWAVLTAISKKARLRS 309 A++ +P + S PTPP V + K D+P + E GV+A+ T + R Sbjct: 92 ATRGAAPRNHSFPTPP------VKPVIMAFTKSYDRPYEELEQGVYAITTEDIRWLRCDI 145 Query: 310 EGMNILLN 333 + +N+L N Sbjct: 146 KSLNLLGN 153
>K0247_HUMAN (Q92537) Protein KIAA0247 precursor| Length = 303 Score = 29.6 bits (65), Expect = 3.5 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 8/60 (13%) Frame = -1 Query: 266 QTPG-SGFCTGWSANLRATARISSTPTGEGLGGVG----AEQETGDSA---LEAILGVTS 111 + PG SG C W + T + T + G G A +ET DS ++++L +TS Sbjct: 231 EAPGQSGLCEAWGSRASETVMVHQATTSSWVAGSGNRQLAHKETADSENSDIQSLLSLTS 290
>MTF1_HUMAN (Q14872) Metal-regulatory transcription factor 1 (Transcription| factor MTF-1) (MRE-binding transcription factor) Length = 753 Score = 29.6 bits (65), Expect = 3.5 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 2/62 (3%) Frame = +1 Query: 157 CSAPTPPKPSPVGVD--EMRAVARKFADQPVQNPEPGVWAVLTAISKKARLRSEGMNILL 330 CS+P PP+PSP D ++ A+ F+ PV S++A S+ L Sbjct: 653 CSSPPPPEPSPQAPDGPSLQLPAQTFSSAPVPGSSSSTLPSSCEQSRQAETPSDPQTETL 712 Query: 331 NA 336 +A Sbjct: 713 SA 714
>GNDS_HUMAN (Q12967) Ral guanine nucleotide dissociation stimulator (RalGEF)| (RalGDS) Length = 914 Score = 29.3 bits (64), Expect = 4.6 Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Frame = +1 Query: 106 DMLVTPKMASKAESPVSCSAPTP-PKPSPVGVDEMRAVARKFADQPVQNPEPGV 264 ++ +TP ++A SPV AP P P P+P E+ VA A + Q PEP V Sbjct: 274 ELALTP---ARAPSPVPAPAPEPEPAPTPAPGSELE-VAPAPAPELQQAPEPAV 323
>ADIPO_MOUSE (Q60994) Adiponectin precursor (Adipocyte, C1q and collagen| domain-containing protein) (30 kDa adipocyte complement-related protein) (ACRP30) (Adipocyte-specific protein AdipoQ) Length = 247 Score = 29.3 bits (64), Expect = 4.6 Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 1/50 (2%) Frame = -1 Query: 260 PGSGFCTGWSANLRATARISSTPTGEGLGGV-GAEQETGDSALEAILGVT 114 P G C GW A + + TP +G G G + E GD+ L G T Sbjct: 34 PPKGTCAGWMAGIPGHPGHNGTPGRDGRDGTPGEKGEKGDAGLLGPKGET 83
>PCLO_RAT (Q9JKS6) Protein piccolo (Aczonin) (Multidomain presynaptic| cytomatrix protein) Length = 5085 Score = 29.3 bits (64), Expect = 4.6 Identities = 15/47 (31%), Positives = 23/47 (48%) Frame = +1 Query: 118 TPKMASKAESPVSCSAPTPPKPSPVGVDEMRAVARKFADQPVQNPEP 258 T A+ ++SPV +P K P D +A+ K +P + PEP Sbjct: 600 TAPTATASKSPVPSQQASPKKEPPSKQDSPKALESKKPPEPKKPPEP 646
>FTSK1_RALSO (Q8XRH0) DNA translocase ftsK 1| Length = 959 Score = 28.5 bits (62), Expect = 7.9 Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 14/60 (23%) Frame = +1 Query: 121 PKMASKAESPVSCSAPTPP-KPSPVGVD-------------EMRAVARKFADQPVQNPEP 258 P ++ AE SAP P +PSP VD E+R + A PV +PEP Sbjct: 274 PAISPAAEPDAPASAPPEPAEPSPPTVDLEAVRQEAEALLAELRGLMTPLAAAPVASPEP 333
>EVL_MOUSE (P70429) Ena/VASP-like protein (Ena/vasodilator stimulated| phosphoprotein-like) Length = 414 Score = 28.5 bits (62), Expect = 7.9 Identities = 11/21 (52%), Positives = 14/21 (66%) Frame = +1 Query: 130 ASKAESPVSCSAPTPPKPSPV 192 +S A + +SCS P PP P PV Sbjct: 168 SSAASTTLSCSGPPPPPPPPV 188
>PSBY_ARATH (O49347) Photosystem II core complex proteins psbY, chloroplast| precursor (L-arginine metabolising enzyme) (L-AME) [Contains: Photosystem II protein psbY-1 (psbY-A1); Photosystem II protein psbY-2 (psbY-A2)] Length = 189 Score = 28.5 bits (62), Expect = 7.9 Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 1/71 (1%) Frame = +1 Query: 121 PKMASKAESPVSCSAPTPPKPS-PVGVDEMRAVARKFADQPVQNPEPGVWAVLTAISKKA 297 PK+ ++ +S S PTPPKP+ + V F+ P + + + A Sbjct: 19 PKLQNQTKSKPFISLPTPPKPNVSLAVTSTALAGAVFSSLSYSEPALAIQQIAQLAAANA 78 Query: 298 RLRSEGMNILL 330 + G+ +LL Sbjct: 79 SSDNRGLALLL 89
>MUG1_MOUSE (P28665) Murinoglobulin-1 precursor (MuG1)| Length = 1476 Score = 28.5 bits (62), Expect = 7.9 Identities = 16/61 (26%), Positives = 27/61 (44%) Frame = +1 Query: 106 DMLVTPKMASKAESPVSCSAPTPPKPSPVGVDEMRAVARKFADQPVQNPEPGVWAVLTAI 285 D+ TP+++ + +S PP+ P D + RK+ PE VW ++T Sbjct: 696 DLAFTPEISWSLRTTLSKRPEEPPRKDPSSNDPLTETIRKYF------PETWVWDIVTVN 749 Query: 286 S 288 S Sbjct: 750 S 750 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.315 0.131 0.391 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,265,430 Number of Sequences: 219361 Number of extensions: 1008588 Number of successful extensions: 5433 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 4995 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5387 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2677159704 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)
