ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl02a03 |
|---|---|
| Clone Library Name | barley_pub |
>ARFH_ARATH (Q9FGV1) Auxin response factor 8| Length = 811 Score = 141 bits (355), Expect = 1e-33 Identities = 64/74 (86%), Positives = 71/74 (95%) Frame = +2 Query: 260 KKNLNSELWHACAGPLVCLPTLGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPPQLI 439 +K LNSELWHACAGPLV LP+ G+RVVYFPQGHSEQVAA+TNKEV+GHIPNYP+LPPQLI Sbjct: 16 EKCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQLI 75 Query: 440 CQLHDVTMHADVET 481 CQLH+VTMHADVET Sbjct: 76 CQLHNVTMHADVET 89
>ARFF_ARATH (Q9ZTX8) Auxin response factor 6| Length = 933 Score = 137 bits (345), Expect = 1e-32 Identities = 63/74 (85%), Positives = 69/74 (93%) Frame = +2 Query: 260 KKNLNSELWHACAGPLVCLPTLGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPPQLI 439 K+ LNSELWHACAGPLV LP +G+RVVYFPQGHSEQVAASTNKEV+ HIPNYP+L PQLI Sbjct: 17 KRVLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLHPQLI 76 Query: 440 CQLHDVTMHADVET 481 CQLH+VTMHADVET Sbjct: 77 CQLHNVTMHADVET 90
>ARFS_ARATH (Q8RYC8) Auxin response factor 19 (Auxin-responsive protein IAA22)| Length = 1086 Score = 114 bits (284), Expect = 2e-25 Identities = 53/74 (71%), Positives = 61/74 (82%) Frame = +2 Query: 260 KKNLNSELWHACAGPLVCLPTLGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPPQLI 439 KK +NS+LWHACAGPLV LP +G+ VVYFPQGHSEQVAAS K+ + IPNYPNLP +LI Sbjct: 17 KKPINSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQTD-FIPNYPNLPSKLI 75 Query: 440 CQLHDVTMHADVET 481 C LH VT+HAD ET Sbjct: 76 CLLHSVTLHADTET 89
>ARFE_ARATH (P93024) Auxin response factor 5 (Transcription factor MONOPTEROS)| (Auxin-responsive protein IAA24) Length = 902 Score = 111 bits (278), Expect = 9e-25 Identities = 48/74 (64%), Positives = 59/74 (79%) Frame = +2 Query: 260 KKNLNSELWHACAGPLVCLPTLGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPPQLI 439 K +NSELWHACAGPLVCLP +G+ V YF QGHSEQVA ST + +PNYPNLP QL+ Sbjct: 48 KPVINSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLM 107 Query: 440 CQLHDVTMHADVET 481 CQ+H+VT+HAD ++ Sbjct: 108 CQVHNVTLHADKDS 121
>ARFG_ARATH (P93022) Auxin response factor 7 (Non-phototropic hypocotyl 4)| (Protein BIPOSTO) (Auxin-responsive protein IAA21/IAA23/IAA25) Length = 1164 Score = 110 bits (275), Expect = 2e-24 Identities = 50/74 (67%), Positives = 62/74 (83%) Frame = +2 Query: 260 KKNLNSELWHACAGPLVCLPTLGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPPQLI 439 ++N+NSELWHACAGPL+ LP G+ VVYFPQGHSEQVAAS K+ + IP+YPNLP +LI Sbjct: 18 RRNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTD-FIPSYPNLPSKLI 76 Query: 440 CQLHDVTMHADVET 481 C LH+VT++AD ET Sbjct: 77 CMLHNVTLNADPET 90
>ARFK_ARATH (Q9ZPY6) Auxin response factor 11| Length = 601 Score = 79.0 bits (193), Expect = 6e-15 Identities = 40/72 (55%), Positives = 53/72 (73%), Gaps = 1/72 (1%) Frame = +2 Query: 269 LNSELWHACAGPLVCLPTLGTRVVYFPQGHSEQVAASTNK-EVEGHIPNYPNLPPQLICQ 445 L +ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+ V+ IP + NLPP+++C+ Sbjct: 18 LYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVVDQEIPVF-NLPPKILCR 76 Query: 446 LHDVTMHADVET 481 + VT+ A+ ET Sbjct: 77 VLSVTLKAEHET 88
>ARFB_ARATH (Q94JM3) Auxin response factor 2 (ARF1-binding protein) (ARF1-BP)| Length = 859 Score = 79.0 bits (193), Expect = 6e-15 Identities = 38/71 (53%), Positives = 50/71 (70%) Frame = +2 Query: 269 LNSELWHACAGPLVCLPTLGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPPQLICQL 448 L ELWHACAGPLV +P RV YFPQGH EQV ASTN+ E +P Y +LP +L+C++ Sbjct: 58 LYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLY-DLPSKLLCRV 116 Query: 449 HDVTMHADVET 481 +V + A+ +T Sbjct: 117 INVDLKAEADT 127
>ARFA_ARATH (Q8L7G0) Auxin response factor 1| Length = 665 Score = 76.3 bits (186), Expect = 4e-14 Identities = 34/68 (50%), Positives = 50/68 (73%) Frame = +2 Query: 278 ELWHACAGPLVCLPTLGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPPQLICQLHDV 457 ELWHACAGPLV LP G RV YFP+GH EQ+ AS ++ +E +P++ NLP +++C++ ++ Sbjct: 22 ELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSF-NLPSKILCKVINI 80 Query: 458 TMHADVET 481 A+ ET Sbjct: 81 QRRAEPET 88
>ARFR_ARATH (Q9C5W9) Auxin response factor 18| Length = 602 Score = 74.3 bits (181), Expect = 2e-13 Identities = 35/71 (49%), Positives = 48/71 (67%) Frame = +2 Query: 269 LNSELWHACAGPLVCLPTLGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPPQLICQL 448 L +ELW CAGPLV +P RV YFPQGH EQ+ ASTN+ + +LPP+++C++ Sbjct: 22 LYTELWKVCAGPLVEVPRAQERVFYFPQGHMEQLVASTNQGINSEEIPVFDLPPKILCRV 81 Query: 449 HDVTMHADVET 481 DVT+ A+ ET Sbjct: 82 LDVTLKAEHET 92
>ARFD_ARATH (Q9ZTX9) Auxin response factor 4| Length = 788 Score = 69.7 bits (169), Expect = 4e-12 Identities = 37/73 (50%), Positives = 51/73 (69%), Gaps = 1/73 (1%) Frame = +2 Query: 266 NLNSELWHACAGPLVCLPTLGTRVVYFPQGHSEQVA-ASTNKEVEGHIPNYPNLPPQLIC 442 ++ SELWHACAGPL CLP G VVYFPQGH EQ A S + +E IP + +L PQ++C Sbjct: 61 SIYSELWHACAGPLTCLPKKGNVVVYFPQGHLEQDAMVSYSSPLE--IPKF-DLNPQIVC 117 Query: 443 QLHDVTMHADVET 481 ++ +V + A+ +T Sbjct: 118 RVVNVQLLANKDT 130
>ARFC_ARATH (O23661) Auxin response factor 3 (Protein ETTIN)| Length = 608 Score = 67.4 bits (163), Expect = 2e-11 Identities = 33/68 (48%), Positives = 43/68 (63%) Frame = +2 Query: 278 ELWHACAGPLVCLPTLGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPPQLICQLHDV 457 ELWHACAGPL+ LP G+ V+YFPQGH EQ A + + G LPP + C++ DV Sbjct: 54 ELWHACAGPLISLPKRGSLVLYFPQGHLEQ-APDFSAAIYG-------LPPHVFCRILDV 105 Query: 458 TMHADVET 481 +HA+ T Sbjct: 106 KLHAETTT 113
>ARFI_ARATH (Q9XED8) Auxin response factor 9| Length = 638 Score = 63.9 bits (154), Expect = 2e-10 Identities = 31/71 (43%), Positives = 44/71 (61%) Frame = +2 Query: 269 LNSELWHACAGPLVCLPTLGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPPQLICQL 448 L ELW CAGPLV +P RV YFPQGH EQ+ AST + + LPP+++C + Sbjct: 9 LYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFVLPPKILCNV 68 Query: 449 HDVTMHADVET 481 +V++ A+ +T Sbjct: 69 MNVSLQAEKDT 79
>ARFW_ARATH (Q9LP07) Putative auxin response factor 23| Length = 222 Score = 62.4 bits (150), Expect = 6e-10 Identities = 33/73 (45%), Positives = 45/73 (61%) Frame = +2 Query: 260 KKNLNSELWHACAGPLVCLPTLGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPPQLI 439 K + +LW CAGPL +P LG +V YFPQGH E V AST +E+ PN +LP +L Sbjct: 21 KSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPNC-DLPSKLQ 79 Query: 440 CQLHDVTMHADVE 478 C++ + +H VE Sbjct: 80 CRV--IAIHLKVE 90
>ARFJ_ARATH (Q9SKN5) Auxin response factor 10| Length = 693 Score = 61.2 bits (147), Expect = 1e-09 Identities = 29/74 (39%), Positives = 44/74 (59%) Frame = +2 Query: 260 KKNLNSELWHACAGPLVCLPTLGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPPQLI 439 +K+L+ +LWHACAG +V +P+L + V YF QGH+E A + P +PP ++ Sbjct: 4 EKSLDPQLWHACAGSMVQIPSLNSTVFYFAQGHTEHAHAPPDFHA-------PRVPPLIL 56 Query: 440 CQLHDVTMHADVET 481 C++ V AD ET Sbjct: 57 CRVVSVKFLADAET 70
>ARFP_ARATH (Q93YR9) Auxin response factor 16| Length = 670 Score = 58.5 bits (140), Expect = 9e-09 Identities = 27/74 (36%), Positives = 46/74 (62%) Frame = +2 Query: 260 KKNLNSELWHACAGPLVCLPTLGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPPQLI 439 +K L+ +LWHACAG +V +P + ++V YFPQGH+E + G++P +PP ++ Sbjct: 13 EKGLDPQLWHACAGGMVRMPPMNSKVFYFPQGHAENAYDCVD---FGNLP----IPPMVL 65 Query: 440 CQLHDVTMHADVET 481 C++ + AD E+ Sbjct: 66 CRVLAIKYMADAES 79
>ARFM_ARATH (Q9FX25) Putative auxin response factor 13| Length = 623 Score = 57.8 bits (138), Expect = 1e-08 Identities = 30/74 (40%), Positives = 42/74 (56%) Frame = +2 Query: 260 KKNLNSELWHACAGPLVCLPTLGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPPQLI 439 K + +LW+ CAGPL LP G +V YFPQGH E + ST E++ HI +LP +L Sbjct: 21 KTYMYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELD-HIRPIFDLPSKLR 79 Query: 440 CQLHDVTMHADVET 481 C++ + D T Sbjct: 80 CRVVAIDRKVDKNT 93
>ARFL_ARATH (Q9XID4) Putative auxin response factor 12| Length = 593 Score = 57.4 bits (137), Expect = 2e-08 Identities = 30/73 (41%), Positives = 43/73 (58%) Frame = +2 Query: 260 KKNLNSELWHACAGPLVCLPTLGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPPQLI 439 K + +LW CAGPL +P LG +V YFPQGH E V ST +E+ + +LP +L Sbjct: 21 KSYVYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVETSTREEL-NELQPICDLPSKLQ 79 Query: 440 CQLHDVTMHADVE 478 C++ + +H VE Sbjct: 80 CRV--IAIHLKVE 90
>ARFO_ARATH (Q9LQE3) Putative auxin response factor 15| Length = 593 Score = 56.6 bits (135), Expect = 3e-08 Identities = 30/73 (41%), Positives = 44/73 (60%) Frame = +2 Query: 260 KKNLNSELWHACAGPLVCLPTLGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPPQLI 439 K + +LW CAGPL +P LG +V YFPQG+ E V AST +E+ + +LP +L Sbjct: 21 KSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGNIELVEASTREEL-NELQPICDLPSKLQ 79 Query: 440 CQLHDVTMHADVE 478 C++ + +H VE Sbjct: 80 CRV--IAIHLKVE 90
>ARFU_ARATH (Q9C8N9) Putative auxin response factor 21| Length = 606 Score = 55.8 bits (133), Expect = 6e-08 Identities = 30/73 (41%), Positives = 43/73 (58%) Frame = +2 Query: 260 KKNLNSELWHACAGPLVCLPTLGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPPQLI 439 K + +LW CAGPL +P LG V YFPQG+ E V AST +E+ + +LP +L Sbjct: 21 KSYMYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVQASTREEL-NELQPICDLPSKLQ 79 Query: 440 CQLHDVTMHADVE 478 C++ + +H VE Sbjct: 80 CRV--IAIHLKVE 90
>ARFT_ARATH (Q9C7I9) Putative auxin response factor 20| Length = 606 Score = 55.5 bits (132), Expect = 7e-08 Identities = 30/73 (41%), Positives = 43/73 (58%) Frame = +2 Query: 260 KKNLNSELWHACAGPLVCLPTLGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPPQLI 439 K + +LW CAGPL +P LG V YFPQG+ E V AST +E+ + +LP +L Sbjct: 21 KSYMYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVDASTREEL-NELQPICDLPSKLQ 79 Query: 440 CQLHDVTMHADVE 478 C++ + +H VE Sbjct: 80 CRV--IAIHLKVE 90
>ARFN_ARATH (Q9LQE8) Putative auxin response factor 14| Length = 605 Score = 55.5 bits (132), Expect = 7e-08 Identities = 27/63 (42%), Positives = 38/63 (60%) Frame = +2 Query: 260 KKNLNSELWHACAGPLVCLPTLGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPPQLI 439 K + +LW CAGPL +P LG +V YFPQGH E V AST +E+ + + P +L Sbjct: 21 KSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREEL-NELQPICDFPSKLQ 79 Query: 440 CQL 448 C++ Sbjct: 80 CRV 82
>ARFV_ARATH (Q9C8N7) Putative auxin response factor 22| Length = 598 Score = 53.9 bits (128), Expect = 2e-07 Identities = 26/63 (41%), Positives = 39/63 (61%) Frame = +2 Query: 260 KKNLNSELWHACAGPLVCLPTLGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPPQLI 439 K + +LW CAGPL +P LG ++ YFPQG+ E V AST +E+ + +LP +L Sbjct: 21 KSYMYEQLWKLCAGPLCDIPKLGEKIYYFPQGNIELVEASTREEL-NELKPICDLPSKLQ 79 Query: 440 CQL 448 C++ Sbjct: 80 CRV 82
>ARFQ_ARATH (Q84WU6) Auxin response factor 17| Length = 585 Score = 42.4 bits (98), Expect = 7e-04 Identities = 17/34 (50%), Positives = 23/34 (67%) Frame = +2 Query: 263 KNLNSELWHACAGPLVCLPTLGTRVVYFPQGHSE 364 + ++ +W ACAG V +P L +RV YFPQGH E Sbjct: 14 REVDPTIWRACAGASVQIPVLHSRVYYFPQGHVE 47
>PEXLP_TOBAC (Q03211) Pistil-specific extensin-like protein precursor (PELP)| Length = 426 Score = 32.7 bits (73), Expect = 0.52 Identities = 16/49 (32%), Positives = 28/49 (57%) Frame = -1 Query: 216 PPRLAPEEELISPAPVTRPENEKPTPPHKSARRYPILKSAAFSSHPAVI 70 PP P + SP+P T+P ++P PP + A++ P+L ++P V+ Sbjct: 197 PPPPPPPVKAPSPSPATQPPTKQPPPPPR-AKKSPLLPPPPPVAYPPVM 244
>PI5PA_MOUSE (P59644) Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A (EC| 3.1.3.56) Length = 1003 Score = 31.2 bits (69), Expect = 1.5 Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 9/55 (16%) Frame = -1 Query: 216 PPRLAPEEELISPAPVTRP-----ENEKPTPPHKSARRY----PILKSAAFSSHP 79 PP P L SP PV P E ++P PPH S R ++ SAA +S P Sbjct: 70 PPSERPRLVLSSPRPVLAPLSIAGEQKRPPPPHSSNRAAKSVGQLVVSAAAASKP 124
>IF2_PROMM (Q7V5M4) Translation initiation factor IF-2| Length = 1125 Score = 29.6 bits (65), Expect = 4.4 Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 3/35 (8%) Frame = -1 Query: 213 PRLAPEEELISPAPVTRPENEKPTP---PHKSARR 118 P E + PAP TRP N PTP P K+A R Sbjct: 116 PARPSTESVAHPAPPTRPANPTPTPTSSPPKTAAR 150
>BRWD1_MOUSE (Q921C3) Bromodomain and WD-repeat domain-containing protein 1| (WD-repeat protein 9) Length = 2304 Score = 29.3 bits (64), Expect = 5.7 Identities = 10/21 (47%), Positives = 14/21 (66%) Frame = +2 Query: 314 LPTLGTRVVYFPQGHSEQVAA 376 +P +G V+YFPQGH + A Sbjct: 959 VPQMGDEVIYFPQGHEAYIEA 979
>COBB_STRCO (Q9RJ16) Cobyrinic acid A,C-diamide synthase| Length = 486 Score = 28.9 bits (63), Expect = 7.5 Identities = 14/43 (32%), Positives = 18/43 (41%) Frame = -1 Query: 216 PPRLAPEEELISPAPVTRPENEKPTPPHKSARRYPILKSAAFS 88 PP P P P+ RP +P P RR + AAF+ Sbjct: 257 PPLPVPSPGAAPPDPLVRPGRPRPQAPDGLRRRVAMASGAAFT 299
>CAR14_HUMAN (Q9BXL6) Caspase recruitment domain-containing protein 14| (CARD-containing MAGUK protein 2) (Carma 2) Length = 1004 Score = 28.9 bits (63), Expect = 7.5 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%) Frame = +2 Query: 356 HSEQVAASTNKEVEGH--IPNYPNLPPQLICQLHDVTMHADV 475 H+ +V + T K+ H IPNY QLI + D+T V Sbjct: 717 HAHRVNSYTMKDTAAHGTIPNYSRAQQQLIALIQDMTQQCTV 758
>GPI8_PONPY (Q5R6L8) GPI-anchor transamidase precursor (EC 3.-.-.-) (GPI| transamidase) (Phosphatidylinositol-glycan biosynthesis, class K protein) (PIG-K) Length = 395 Score = 28.5 bits (62), Expect = 9.7 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 3/34 (8%) Frame = +1 Query: 106 EDGVPPGGFVRGRW---FLVFWSCYGCGGDELLF 198 +D PPGGF+ G W +VF+ YG + +F Sbjct: 362 KDWHPPGGFILGLWALIIMVFFKTYGIKHMKFIF 395
>GPI8_PIG (Q4KRV1) GPI-anchor transamidase precursor (EC 3.-.-.-) (GPI| transamidase) (Phosphatidylinositol-glycan biosynthesis, class K protein) (PIG-K) Length = 395 Score = 28.5 bits (62), Expect = 9.7 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 3/34 (8%) Frame = +1 Query: 106 EDGVPPGGFVRGRW---FLVFWSCYGCGGDELLF 198 +D PPGGF+ G W +VF+ YG + +F Sbjct: 362 KDWHPPGGFILGLWALIIMVFFKTYGIKHMKFIF 395
>GPI8_HUMAN (Q92643) GPI-anchor transamidase precursor (EC 3.-.-.-) (GPI| transamidase) (Phosphatidylinositol-glycan biosynthesis, class K protein) (PIG-K) (hGPI8) Length = 395 Score = 28.5 bits (62), Expect = 9.7 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 3/34 (8%) Frame = +1 Query: 106 EDGVPPGGFVRGRW---FLVFWSCYGCGGDELLF 198 +D PPGGF+ G W +VF+ YG + +F Sbjct: 362 KDWHPPGGFILGLWALIIMVFFKTYGIKHMKFIF 395
>GPI8_BOVIN (Q3MHZ7) GPI-anchor transamidase precursor (EC 3.-.-.-) (GPI| transamidase) (Phosphatidylinositol-glycan biosynthesis, class K protein) (PIG-K) Length = 395 Score = 28.5 bits (62), Expect = 9.7 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 3/34 (8%) Frame = +1 Query: 106 EDGVPPGGFVRGRW---FLVFWSCYGCGGDELLF 198 +D PPGGF+ G W +VF+ YG + +F Sbjct: 362 KDWHPPGGFILGLWALIIMVFFKTYGIKHMKFIF 395
>MMPL2_MYCTU (Q11171) Putative membrane protein mmpL2| Length = 968 Score = 28.5 bits (62), Expect = 9.7 Identities = 11/27 (40%), Positives = 16/27 (59%) Frame = -3 Query: 142 APSQIRPAVPHPQIRRILISSGSHPSS 62 A +RP P +R +L+ SG HPS+ Sbjct: 937 ASQMLRPFAPRRLVRALLLPSGQHPSA 963
>ATG3_BRARE (Q6PFS7) Autophagy-related protein 3 (APG3-like)| Length = 317 Score = 28.5 bits (62), Expect = 9.7 Identities = 12/24 (50%), Positives = 16/24 (66%) Frame = +2 Query: 404 IPNYPNLPPQLICQLHDVTMHADV 475 I N+PNLPP +C +H HA+V Sbjct: 250 IENHPNLPPPAMCSVHP-CRHAEV 272
>CAR14_MOUSE (Q99KF0) Caspase recruitment domain-containing protein 14| (Bcl10-interacting MAGUK protein 2) (Bimp2) Length = 999 Score = 28.5 bits (62), Expect = 9.7 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%) Frame = +2 Query: 356 HSEQVAASTNKEVE-GHIPNYPNLPPQLICQLHDVTMHADV 475 H+ V T K++E G IPNY QL+ + D+T V Sbjct: 714 HAHHVNPYTMKDMEPGTIPNYSQAQQQLLALIQDMTQRCTV 754
>PABP2_HUMAN (Q86U42) Polyadenylate-binding protein 2 (Poly(A)-binding protein| 2) (PolyA binding protein II) (PABII) (Polyadenylate-binding nuclear protein 1) (Nuclear poly(A)-binding protein 1) Length = 305 Score = 28.5 bits (62), Expect = 9.7 Identities = 12/23 (52%), Positives = 13/23 (56%) Frame = -1 Query: 207 LAPEEELISPAPVTRPENEKPTP 139 L PEE L+ P P PE E P P Sbjct: 54 LEPEELLLEPEPEPEPEEEPPRP 76
>PABP2_BOVIN (Q28165) Polyadenylate-binding protein 2 (Poly(A)-binding protein| 2) (PolyA-binding protein II) (PABII) (Polyadenylate-binding nuclear protein 1) (Nuclear poly(A)-binding protein 1) Length = 305 Score = 28.5 bits (62), Expect = 9.7 Identities = 12/23 (52%), Positives = 13/23 (56%) Frame = -1 Query: 207 LAPEEELISPAPVTRPENEKPTP 139 L PEE L+ P P PE E P P Sbjct: 54 LEPEELLLEPEPEPEPEEEPPRP 76 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 38,359,825 Number of Sequences: 219361 Number of extensions: 597950 Number of successful extensions: 2908 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 2626 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2886 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3304846491 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
