Clone Name | bastl01h07 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK065546.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013031G01, full insert sequence Length = 3036 Score = 349 bits (176), Expect = 5e-93 Identities = 245/268 (91%) Strand = Plus / Plus Query: 186 cttcgagccgttcaacgtgagctacgatcatcgcgcggtgcgcatcggcgggcagcggag 245 |||||||||||||||||||| ||||| || |||||||||| |||||| ||| ||||||| Sbjct: 268 cttcgagccgttcaacgtgacgtacgaccaccgcgcggtgctcatcggtgggaagcggag 327 Query: 246 gatgctcgtctcagcgggagtgcactacccccgcgccacacccgagatgtggcctagtat 305 |||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||| | Sbjct: 328 gatgctcgtctccgcggggctgcactacccgcgcgccacacccgagatgtggcctagttt 387 Query: 306 aattgcaaagtgcaaggaaggtggtgcagatgtaattgagacatatgtcttttggaatgg 365 |||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 388 aattgcaaagtgcaaggagggtggcgcagatgtaattgagacctatgtcttttggaatgg 447 Query: 366 gcatgaaccagccaaaggtcagtattacttcgaagacagatttgatcttgtgagatttgt 425 ||||| ||||||||||||||||||||||| ||||| |||||||||||||||| ||||| Sbjct: 448 ccatgagccagccaaaggtcagtattactttgaagaaagatttgatcttgtgaaatttgc 507 Query: 426 gaagctggttgctgctgaaggcctattt 453 ||||||||||||||| ||||| |||||| Sbjct: 508 gaagctggttgctgccgaaggtctattt 535
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 147 bits (74), Expect = 4e-32 Identities = 92/98 (93%) Strand = Plus / Minus Query: 290 agatgtggcctagtataattgcaaagtgcaaggaaggtggtgcagatgtaattgagacat 349 |||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||| | Sbjct: 13825568 agatgtggcctagtttaattgcaaagtgcaaggagggtggcgcagatgtaattgagacct 13825509 Query: 350 atgtcttttggaatgggcatgaaccagccaaaggtcag 387 |||||||||||||||| ||||| ||||||||||||||| Sbjct: 13825508 atgtcttttggaatggccatgagccagccaaaggtcag 13825471 Score = 123 bits (62), Expect = 5e-25 Identities = 95/106 (89%) Strand = Plus / Minus Query: 186 cttcgagccgttcaacgtgagctacgatcatcgcgcggtgcgcatcggcgggcagcggag 245 |||||||||||||||||||| ||||| || |||||||||| |||||| ||| ||||||| Sbjct: 13826427 cttcgagccgttcaacgtgacgtacgaccaccgcgcggtgctcatcggtgggaagcggag 13826368 Query: 246 gatgctcgtctcagcgggagtgcactacccccgcgccacacccgag 291 |||||||||||| ||||| |||||||||| ||||||||||||||| Sbjct: 13826367 gatgctcgtctccgcggggctgcactacccgcgcgccacacccgag 13826322 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 407 ttgatcttgtgagatttgtgaagctggttgctgctgaaggcctattt 453 |||||||||||| ||||| ||||||||||||||| ||||| |||||| Sbjct: 13825344 ttgatcttgtgaaatttgcgaagctggttgctgccgaaggtctattt 13825298 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 385 cagtattacttcgaagacagatttgatcttgtgagatttgtgaag 429 ||||||||||| ||||| |||||||||||||||| ||||| |||| Sbjct: 13825390 cagtattactttgaagaaagatttgatcttgtgaaatttgcgaag 13825346 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 cctcttcctcctcctcgtcg 106 |||||||||||||||||||| Sbjct: 23708393 cctcttcctcctcctcgtcg 23708374 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 cctcttcctcctcctcgtcg 106 |||||||||||||||||||| Sbjct: 3661375 cctcttcctcctcctcgtcg 3661356
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 147 bits (74), Expect = 4e-32 Identities = 92/98 (93%) Strand = Plus / Minus Query: 290 agatgtggcctagtataattgcaaagtgcaaggaaggtggtgcagatgtaattgagacat 349 |||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||| | Sbjct: 13779848 agatgtggcctagtttaattgcaaagtgcaaggagggtggcgcagatgtaattgagacct 13779789 Query: 350 atgtcttttggaatgggcatgaaccagccaaaggtcag 387 |||||||||||||||| ||||| ||||||||||||||| Sbjct: 13779788 atgtcttttggaatggccatgagccagccaaaggtcag 13779751 Score = 123 bits (62), Expect = 5e-25 Identities = 95/106 (89%) Strand = Plus / Minus Query: 186 cttcgagccgttcaacgtgagctacgatcatcgcgcggtgcgcatcggcgggcagcggag 245 |||||||||||||||||||| ||||| || |||||||||| |||||| ||| ||||||| Sbjct: 13780707 cttcgagccgttcaacgtgacgtacgaccaccgcgcggtgctcatcggtgggaagcggag 13780648 Query: 246 gatgctcgtctcagcgggagtgcactacccccgcgccacacccgag 291 |||||||||||| ||||| |||||||||| ||||||||||||||| Sbjct: 13780647 gatgctcgtctccgcggggctgcactacccgcgcgccacacccgag 13780602 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 407 ttgatcttgtgagatttgtgaagctggttgctgctgaaggcctattt 453 |||||||||||| ||||| ||||||||||||||| ||||| |||||| Sbjct: 13779624 ttgatcttgtgaaatttgcgaagctggttgctgccgaaggtctattt 13779578 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 385 cagtattacttcgaagacagatttgatcttgtgagatttgtgaag 429 ||||||||||| ||||| |||||||||||||||| ||||| |||| Sbjct: 13779670 cagtattactttgaagaaagatttgatcttgtgaaatttgcgaag 13779626 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 cctcttcctcctcctcgtcg 106 |||||||||||||||||||| Sbjct: 23636584 cctcttcctcctcctcgtcg 23636565 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 cctcttcctcctcctcgtcg 106 |||||||||||||||||||| Sbjct: 3661349 cctcttcctcctcctcgtcg 3661330
>emb|BX664709.2|CNS09SBZ Oryza sativa chromosome 12, . BAC B1270G11 of chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 155451 Score = 147 bits (74), Expect = 4e-32 Identities = 92/98 (93%) Strand = Plus / Minus Query: 290 agatgtggcctagtataattgcaaagtgcaaggaaggtggtgcagatgtaattgagacat 349 |||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||| | Sbjct: 141227 agatgtggcctagtttaattgcaaagtgcaaggagggtggcgcagatgtaattgagacct 141168 Query: 350 atgtcttttggaatgggcatgaaccagccaaaggtcag 387 |||||||||||||||| ||||| ||||||||||||||| Sbjct: 141167 atgtcttttggaatggccatgagccagccaaaggtcag 141130 Score = 123 bits (62), Expect = 5e-25 Identities = 95/106 (89%) Strand = Plus / Minus Query: 186 cttcgagccgttcaacgtgagctacgatcatcgcgcggtgcgcatcggcgggcagcggag 245 |||||||||||||||||||| ||||| || |||||||||| |||||| ||| ||||||| Sbjct: 142086 cttcgagccgttcaacgtgacgtacgaccaccgcgcggtgctcatcggtgggaagcggag 142027 Query: 246 gatgctcgtctcagcgggagtgcactacccccgcgccacacccgag 291 |||||||||||| ||||| |||||||||| ||||||||||||||| Sbjct: 142026 gatgctcgtctccgcggggctgcactacccgcgcgccacacccgag 141981 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 407 ttgatcttgtgagatttgtgaagctggttgctgctgaaggcctattt 453 |||||||||||| ||||| ||||||||||||||| ||||| |||||| Sbjct: 141003 ttgatcttgtgaaatttgcgaagctggttgctgccgaaggtctattt 140957 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 385 cagtattacttcgaagacagatttgatcttgtgagatttgtgaag 429 ||||||||||| ||||| |||||||||||||||| ||||| |||| Sbjct: 141049 cagtattactttgaagaaagatttgatcttgtgaaatttgcgaag 141005
>gb|AY262686.1| Glycine max cultivar Williams 82 BAC clone Gm_ISb001_104_J07, complete sequence Length = 103334 Score = 69.9 bits (35), Expect = 7e-09 Identities = 74/87 (85%) Strand = Plus / Minus Query: 290 agatgtggcctagtataattgcaaagtgcaaggaaggtggtgcagatgtaattgagacat 349 ||||||||||| | | ||||||||| ||||||||||||| || ||||| ||||| || | Sbjct: 63019 agatgtggcctgatttgattgcaaagagcaaggaaggtggggcggatgtgattgaaactt 62960 Query: 350 atgtcttttggaatgggcatgaaccag 376 |||| || |||||||||||||| |||| Sbjct: 62959 atgttttctggaatgggcatgagccag 62933 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 193 ccgttcaacgtgagctacgatcatcgcgc 221 ||||||||||||||||||||||| ||||| Sbjct: 63651 ccgttcaacgtgagctacgatcaccgcgc 63623
>ref|NM_128841.3| Arabidopsis thaliana BGAL9; beta-galactosidase/ sugar binding AT2G32810 (BGAL9) mRNA, complete cds Length = 3943 Score = 65.9 bits (33), Expect = 1e-07 Identities = 147/185 (79%) Strand = Plus / Plus Query: 247 atgctcgtctcagcgggagtgcactacccccgcgccacacccgagatgtggcctagtata 306 |||||||||||||| ||| | |||||||| || ||||| || ||||||||| || | | Sbjct: 163 atgctcgtctcagctggaattcactaccctcgagccactcctgagatgtggtctgatctc 222 Query: 307 attgcaaagtgcaaggaaggtggtgcagatgtaattgagacatatgtcttttggaatggg 366 || |||||| | || |||||||| || ||||| || | || ||||| |||||||||||| Sbjct: 223 atcgcaaagagtaaagaaggtggagctgatgtggttcaaacttatgtgttttggaatggg 282 Query: 367 catgaaccagccaaaggtcagtattacttcgaagacagatttgatcttgtgagatttgtg 426 || || || | || ||||||||| |||| |||| |||| ||| ||||| | ||||||| Sbjct: 283 cacgagcctgtaaagggtcagtataactttgaaggaagatatgaccttgtcaaatttgtg 342 Query: 427 aagct 431 ||||| Sbjct: 343 aagct 347
>gb|AY039534.1| Arabidopsis thaliana At2g32810/F24L7.5 mRNA, complete cds Length = 2972 Score = 65.9 bits (33), Expect = 1e-07 Identities = 147/185 (79%) Strand = Plus / Plus Query: 247 atgctcgtctcagcgggagtgcactacccccgcgccacacccgagatgtggcctagtata 306 |||||||||||||| ||| | |||||||| || ||||| || ||||||||| || | | Sbjct: 168 atgctcgtctcagctggaattcactaccctcgagccactcctgagatgtggtctgatctc 227 Query: 307 attgcaaagtgcaaggaaggtggtgcagatgtaattgagacatatgtcttttggaatggg 366 || |||||| | || |||||||| || ||||| || | || ||||| |||||||||||| Sbjct: 228 atcgcaaagagtaaagaaggtggagctgatgtggttcaaacttatgtgttttggaatggg 287 Query: 367 catgaaccagccaaaggtcagtattacttcgaagacagatttgatcttgtgagatttgtg 426 || || || | || ||||||||| |||| |||| |||| ||| ||||| | ||||||| Sbjct: 288 cacgagcctgtaaagggtcagtataactttgaaggaagatatgaccttgtcaaatttgtg 347 Query: 427 aagct 431 ||||| Sbjct: 348 aagct 352
>emb|AJ270305.1|ATH270305 Arabidopsis thaliana mRNA for putative beta-galactosidase (BGAL9 gene) Length = 2664 Score = 65.9 bits (33), Expect = 1e-07 Identities = 147/185 (79%) Strand = Plus / Plus Query: 247 atgctcgtctcagcgggagtgcactacccccgcgccacacccgagatgtggcctagtata 306 |||||||||||||| ||| | |||||||| || ||||| || ||||||||| || | | Sbjct: 157 atgctcgtctcagctggaattcactaccctcgagccactcctgagatgtggtctgatctc 216 Query: 307 attgcaaagtgcaaggaaggtggtgcagatgtaattgagacatatgtcttttggaatggg 366 || |||||| | || |||||||| || ||||| || | || ||||| |||||||||||| Sbjct: 217 atcgcaaagagtaaagaaggtggagctgatgtggttcaaacttatgtgttttggaatggg 276 Query: 367 catgaaccagccaaaggtcagtattacttcgaagacagatttgatcttgtgagatttgtg 426 || || || | || ||||||||| |||| |||| |||| ||| ||||| | ||||||| Sbjct: 277 cacgagcctgtaaagggtcagtataactttgaaggaagatatgaccttgtcaaatttgtg 336 Query: 427 aagct 431 ||||| Sbjct: 337 aagct 341
>dbj|AB086425.1| Pyrus communis PcGAL3 mRNA for pear beta-galactosidase3, complete cds Length = 3085 Score = 60.0 bits (30), Expect = 7e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 247 atgctcgtctcagcgggagtgcactacccccgcgccacacccgagatgtggcct 300 ||||||||||| || ||| | ||||||||||||||||| || |||||||||||| Sbjct: 219 atgctcgtctccgccggaatccactacccccgcgccactcctgagatgtggcct 272
>dbj|AB190363.1| Pyrus pyrifolia PpGAL2 mRNA for beta-D-galactosidase, complete cds Length = 3079 Score = 60.0 bits (30), Expect = 7e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 247 atgctcgtctcagcgggagtgcactacccccgcgccacacccgagatgtggcct 300 ||||||||||| || ||| | ||||||||||||||||| || |||||||||||| Sbjct: 207 atgctcgtctccgccggaatccactacccccgcgccactcctgagatgtggcct 260
>emb|AJ519508.1|BEX519508 Bencomia exstipulata microsatellite DNA, clone EX-L2p1c12 Length = 188 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 334 gatgtaattgagacatatgtcttttggaatgggcatgaacc 374 ||||| |||||||||||||| ||||||||||| |||||||| Sbjct: 128 gatgtgattgagacatatgtgttttggaatggtcatgaacc 168
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 344 agacatatgtcttttggaatgggcatgaacca 375 |||| ||||||||||||||||||||||||||| Sbjct: 3512072 agacctatgtcttttggaatgggcatgaacca 3512041 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Minus Query: 87 cctcttcctcctcctcgtcgtcg 109 ||||||||||||||||||||||| Sbjct: 34310525 cctcttcctcctcctcgtcgtcg 34310503 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Minus Query: 87 cctcttcctcctcctcgtcgtcg 109 ||||||||||||||||||||||| Sbjct: 22233640 cctcttcctcctcctcgtcgtcg 22233618 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 agatgtggcctagtataatt 309 |||||||||||||||||||| Sbjct: 34735859 agatgtggcctagtataatt 34735840 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 87 cctcttcctcctcctcgtcgtcgccggt 114 |||| |||||||||||||||||| |||| Sbjct: 31412196 cctcctcctcctcctcgtcgtcgtcggt 31412169 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 82 ttccccctcttcctcctcctcgtcgtcg 109 |||| |||| |||||||||||||||||| Sbjct: 30749125 ttcctcctcctcctcctcctcgtcgtcg 30749098 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 gccgcctcgccgccgccctc 65 |||||||||||||||||||| Sbjct: 29887450 gccgcctcgccgccgccctc 29887469 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 85 cccctcttcctcctcctcgtcgtc 108 |||||| ||||||||||||||||| Sbjct: 9836012 cccctcctcctcctcctcgtcgtc 9836035 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 tccccctcttcctcctcctc 102 |||||||||||||||||||| Sbjct: 6083762 tccccctcttcctcctcctc 6083781
>gb|AF508799.1| Oryza sativa (japonica cultivar-group) beta-galactosidase mRNA, complete cds Length = 2925 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 344 agacatatgtcttttggaatgggcatgaacca 375 |||| ||||||||||||||||||||||||||| Sbjct: 256 agacctatgtcttttggaatgggcatgaacca 287
>gb|AF499737.1| Oryza sativa (japonica cultivar-group) beta-galactosidase mRNA, complete cds Length = 2919 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 344 agacatatgtcttttggaatgggcatgaacca 375 |||| ||||||||||||||||||||||||||| Sbjct: 250 agacctatgtcttttggaatgggcatgaacca 281
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 344 agacatatgtcttttggaatgggcatgaacca 375 |||| ||||||||||||||||||||||||||| Sbjct: 3512183 agacctatgtcttttggaatgggcatgaacca 3512152 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Minus Query: 87 cctcttcctcctcctcgtcgtcg 109 ||||||||||||||||||||||| Sbjct: 34400997 cctcttcctcctcctcgtcgtcg 34400975 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Minus Query: 87 cctcttcctcctcctcgtcgtcg 109 ||||||||||||||||||||||| Sbjct: 22226669 cctcttcctcctcctcgtcgtcg 22226647 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 agatgtggcctagtataatt 309 |||||||||||||||||||| Sbjct: 34825931 agatgtggcctagtataatt 34825912 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 87 cctcttcctcctcctcgtcgtcgccggt 114 |||| |||||||||||||||||| |||| Sbjct: 31502712 cctcctcctcctcctcgtcgtcgtcggt 31502685 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 82 ttccccctcttcctcctcctcgtcgtcg 109 |||| |||| |||||||||||||||||| Sbjct: 30840548 ttcctcctcctcctcctcctcgtcgtcg 30840521 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 gccgcctcgccgccgccctc 65 |||||||||||||||||||| Sbjct: 29978872 gccgcctcgccgccgccctc 29978891 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 85 cccctcttcctcctcctcgtcgtc 108 |||||| ||||||||||||||||| Sbjct: 9834133 cccctcctcctcctcctcgtcgtc 9834156 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 tccccctcttcctcctcctc 102 |||||||||||||||||||| Sbjct: 6082975 tccccctcttcctcctcctc 6082994
>gb|AC107225.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0026H19, complete sequence Length = 150620 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 344 agacatatgtcttttggaatgggcatgaacca 375 |||| ||||||||||||||||||||||||||| Sbjct: 29725 agacctatgtcttttggaatgggcatgaacca 29694
>dbj|AK102192.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087B02, full insert sequence Length = 3309 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 344 agacatatgtcttttggaatgggcatgaacca 375 |||| ||||||||||||||||||||||||||| Sbjct: 541 agacctatgtcttttggaatgggcatgaacca 572
>ref|NM_188046.1| Oryza sativa (japonica cultivar-group), Ozsa8466 predicted mRNA Length = 753 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 83 tccccctcttcctcctcctcgtcgtcgccg 112 ||||||||||||||||||||| |||||||| Sbjct: 53 tccccctcttcctcctcctcgccgtcgccg 82
>tpg|BK001744.1| TPA: TPA_exp: Suid herpesvirus 1, complete genome Length = 143461 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 84 ccccctcttcctcctcctcgtcgtcg 109 |||||||||||||||||||||||||| Sbjct: 11950 ccccctcttcctcctcctcgtcgtcg 11925
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 83 tccccctcttcctcctcctcgtcgtcgccg 112 ||||||||||||||||||||| |||||||| Sbjct: 9328157 tccccctcttcctcctcctcgccgtcgccg 9328128 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Plus Query: 87 cctcttcctcctcctcgtcgtcg 109 ||||||||||||||||||||||| Sbjct: 42941801 cctcttcctcctcctcgtcgtcg 42941823 Score = 46.1 bits (23), Expect = 0.099 Identities = 29/31 (93%) Strand = Plus / Minus Query: 82 ttccccctcttcctcctcctcgtcgtcgccg 112 |||| |||||||||| ||||||||||||||| Sbjct: 31919639 ttcctcctcttcctcatcctcgtcgtcgccg 31919609 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 gtggtggggagggggacggat 177 ||||||||||||||||||||| Sbjct: 42018247 gtggtggggagggggacggat 42018227 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 86 ccctcttcctcctcctcgtcgtcgc 110 ||||| ||||||||||||||||||| Sbjct: 38649576 ccctcctcctcctcctcgtcgtcgc 38649600 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 gccgcctcgccgccgccctc 65 |||||||||||||||||||| Sbjct: 13658007 gccgcctcgccgccgccctc 13658026
>dbj|AP001073.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0667A10 Length = 152237 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 83 tccccctcttcctcctcctcgtcgtcgccg 112 ||||||||||||||||||||| |||||||| Sbjct: 104751 tccccctcttcctcctcctcgccgtcgccg 104722
>dbj|AK119511.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-C04, full insert sequence Length = 1095 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 83 tccccctcttcctcctcctcgtcgtcgccg 112 ||||||||||||||||||||| |||||||| Sbjct: 151 tccccctcttcctcctcctcgccgtcgccg 180
>dbj|AK104155.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-B08, full insert sequence Length = 1023 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 83 tccccctcttcctcctcctcgtcgtcgccg 112 ||||||||||||||||||||| |||||||| Sbjct: 49 tccccctcttcctcctcctcgccgtcgccg 78
>dbj|AK073275.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025K21, full insert sequence Length = 1095 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 83 tccccctcttcctcctcctcgtcgtcgccg 112 ||||||||||||||||||||| |||||||| Sbjct: 146 tccccctcttcctcctcctcgccgtcgccg 175
>emb|AJ010303.1|SHK010303 Suid herpesvirus 1 putative UL47 and UL46 genes and partial gB gene, strain Kaplan Length = 5317 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 84 ccccctcttcctcctcctcgtcgtcg 109 |||||||||||||||||||||||||| Sbjct: 385 ccccctcttcctcctcctcgtcgtcg 360
>ref|NM_125070.2| Arabidopsis thaliana beta-galactosidase AT5G56870 mRNA, complete cds Length = 2502 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 334 gatgtaattgagacatatgtcttttggaatgggcatgaacc 374 ||||| |||||||| ||||| ||||||||||| |||||||| Sbjct: 305 gatgttattgagacttatgttttttggaatggccatgaacc 345
>gb|AC091734.3| Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0068A07, from Chromosome 10, complete sequence Length = 154505 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 82 ttccccctcttcctcctcctcgtcgtcgc 110 ||||||||| ||||||||||||||||||| Sbjct: 27903 ttccccctcctcctcctcctcgtcgtcgc 27931
>gb|AY064690.1| Arabidopsis thaliana beta-galactosidase (At5g56870; MPI10.3) mRNA, complete cds Length = 2235 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 334 gatgtaattgagacatatgtcttttggaatgggcatgaacc 374 ||||| |||||||| ||||| ||||||||||| |||||||| Sbjct: 217 gatgttattgagacttatgttttttggaatggccatgaacc 257
>gb|AY054589.1| Arabidopsis thaliana beta-galactosidase (At5g56870; MPI10.3) mRNA, complete cds Length = 2504 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 334 gatgtaattgagacatatgtcttttggaatgggcatgaacc 374 ||||| |||||||| ||||| ||||||||||| |||||||| Sbjct: 312 gatgttattgagacttatgttttttggaatggccatgaacc 352
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 82 ttccccctcttcctcctcctcgtcgtcgc 110 ||||||||| ||||||||||||||||||| Sbjct: 12506478 ttccccctcctcctcctcctcgtcgtcgc 12506506 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 87 cctcttcctcctcctcgtcgtcgc 110 |||||||||||||||||||||||| Sbjct: 20709825 cctcttcctcctcctcgtcgtcgc 20709848 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cctcttcctcctcctcgtcgtcgc 110 ||||||||||||||||| |||||| Sbjct: 10845388 cctcttcctcctcctcgccgtcgc 10845365
>dbj|AB020747.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MPI10 Length = 29605 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 334 gatgtaattgagacatatgtcttttggaatgggcatgaacc 374 ||||| |||||||| ||||| ||||||||||| |||||||| Sbjct: 18852 gatgttattgagacttatgttttttggaatggccatgaacc 18892
>emb|AJ270300.1|ATH270300 Arabidopsis thaliana mRNA for putative beta-galactosidase (BGAL4 gene) Length = 2471 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 334 gatgtaattgagacatatgtcttttggaatgggcatgaacc 374 ||||| |||||||| ||||| ||||||||||| |||||||| Sbjct: 248 gatgttattgagacttatgttttttggaatggccatgaacc 288
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 82 ttccccctcttcctcctcctcgtcgtcgc 110 ||||||||| ||||||||||||||||||| Sbjct: 12513818 ttccccctcctcctcctcctcgtcgtcgc 12513846 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 87 cctcttcctcctcctcgtcgtcgc 110 |||||||||||||||||||||||| Sbjct: 20721097 cctcttcctcctcctcgtcgtcgc 20721120 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cctcttcctcctcctcgtcgtcgc 110 ||||||||||||||||| |||||| Sbjct: 10851427 cctcttcctcctcctcgccgtcgc 10851404
>ref|NM_197601.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0015I11.19), mRNA Length = 999 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 87 cctcttcctcctcctcgtcgtcgc 110 |||||||||||||||||||||||| Sbjct: 227 cctcttcctcctcctcgtcgtcgc 250
>gb|AC051633.7| Oryza sativa chromosome 10 BAC OSJNBb0015I11 genomic sequence, complete sequence Length = 138824 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 87 cctcttcctcctcctcgtcgtcgc 110 |||||||||||||||||||||||| Sbjct: 111277 cctcttcctcctcctcgtcgtcgc 111300
>gb|AF154420.1|AF154420 Lycopersicon esculentum beta-galactosidase (TBG2) mRNA, complete cds Length = 3001 Score = 48.1 bits (24), Expect = 0.025 Identities = 84/104 (80%) Strand = Plus / Plus Query: 268 cactacccccgcgccacacccgagatgtggcctagtataattgcaaagtgcaaggaaggt 327 |||||||| |||||||| || ||||||||||| | | || || | | |||| |||||| Sbjct: 197 cactaccctcgcgccactcctgagatgtggcccacattgatagctaggagcaaagaaggt 256 Query: 328 ggtgcagatgtaattgagacatatgtcttttggaatgggcatga 371 ||||||||||| || ||||| ||| ||||||||||| ||||| Sbjct: 257 ggtgcagatgtcatcgagacttatacattttggaatggtcatga 300
>gb|AC155896.2| Medicago truncatula chromosome 2 BAC clone mth2-85c24, complete sequence Length = 132817 Score = 48.1 bits (24), Expect = 0.025 Identities = 48/56 (85%) Strand = Plus / Minus Query: 319 aaggaaggtggtgcagatgtaattgagacatatgtcttttggaatgggcatgaacc 374 |||||||||||| ||||| ||| |||| ||||| ||||||||||| |||||||| Sbjct: 62051 aaggaaggtggtttggatgtgattcagacttatgttttttggaatggacatgaacc 61996
>ref|NM_184851.1| Oryza sativa (japonica cultivar-group), mRNA Length = 465 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Minus Query: 87 cctcttcctcctcctcgtcgtcg 109 ||||||||||||||||||||||| Sbjct: 256 cctcttcctcctcctcgtcgtcg 234
>ref|NM_191312.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 813 Score = 46.1 bits (23), Expect = 0.099 Identities = 29/31 (93%) Strand = Plus / Minus Query: 82 ttccccctcttcctcctcctcgtcgtcgccg 112 |||| |||||||||| ||||||||||||||| Sbjct: 444 ttcctcctcttcctcatcctcgtcgtcgccg 414
>ref|NM_189474.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1587 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Plus Query: 87 cctcttcctcctcctcgtcgtcg 109 ||||||||||||||||||||||| Sbjct: 147 cctcttcctcctcctcgtcgtcg 169
>gb|BT018632.1| Zea mays clone EL01N0503G08.d mRNA sequence Length = 1714 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 ccccctcttcctcctcctcgtcg 106 ||||||||||||||||||||||| Sbjct: 48 ccccctcttcctcctcctcgtcg 70
>gb|AY431859.1| Aedes aegypti ASAP ID: 35851 conserved unknown mRNA sequence Length = 705 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Minus Query: 87 cctcttcctcctcctcgtcgtcg 109 ||||||||||||||||||||||| Sbjct: 434 cctcttcctcctcctcgtcgtcg 412
>gb|AC092778.5| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0015G17, complete sequence Length = 158173 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Plus Query: 87 cctcttcctcctcctcgtcgtcg 109 ||||||||||||||||||||||| Sbjct: 115178 cctcttcctcctcctcgtcgtcg 115200
>ref|XM_380415.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00239.1) partial mRNA Length = 3345 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 82 ttccccctcttcctcctcctcgtcgtc 108 |||||| |||||||||||||||||||| Sbjct: 3288 ttccccttcttcctcctcctcgtcgtc 3314
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Plus Query: 87 cctcttcctcctcctcgtcgtcg 109 ||||||||||||||||||||||| Sbjct: 17861194 cctcttcctcctcctcgtcgtcg 17861216 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 89 tcttcctcctcctcgtcgtcgc 110 |||||||||||||||||||||| Sbjct: 27854618 tcttcctcctcctcgtcgtcgc 27854597 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 85 cccctcttcctcctcctcgtcgtcg 109 |||||| |||||||||||||||||| Sbjct: 26248396 cccctcctcctcctcctcgtcgtcg 26248420 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 88 ctcttcctcctcctcgtcgtcgccg 112 |||||||||||||||| |||||||| Sbjct: 25365933 ctcttcctcctcctcgccgtcgccg 25365909 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 92 tcctcctcctcgtcgtcgccg 112 ||||||||||||||||||||| Sbjct: 21927314 tcctcctcctcgtcgtcgccg 21927294 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tccccctcttcctcctcctc 102 |||||||||||||||||||| Sbjct: 28133513 tccccctcttcctcctcctc 28133494 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 136 gcggcgggggagctgagccaggtggtgg 163 ||||||||||||||||| | |||||||| Sbjct: 27210544 gcggcgggggagctgaggccggtggtgg 27210517 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 cctcctcctcgtcgtcgccg 112 |||||||||||||||||||| Sbjct: 7202082 cctcctcctcgtcgtcgccg 7202063 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 82 ttccccctcttcctcctcctcgtc 105 |||| ||||||||||||||||||| Sbjct: 3302132 ttcctcctcttcctcctcctcgtc 3302109
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Minus Query: 91 ttcctcctcctcgtcgtcgccgg 113 ||||||||||||||||||||||| Sbjct: 10270745 ttcctcctcctcgtcgtcgccgg 10270723 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 92 tcctcctcctcgtcgtcgccgg 113 |||||||||||||||||||||| Sbjct: 18845134 tcctcctcctcgtcgtcgccgg 18845113 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 50 cctcgccgccgccctcgcgat 70 ||||||||||||||||||||| Sbjct: 22096941 cctcgccgccgccctcgcgat 22096961 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 87 cctcttcctcctcctcgtcgtcgcc 111 |||| |||||||||||||||||||| Sbjct: 6260685 cctcgtcctcctcctcgtcgtcgcc 6260661 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 89 tcttcctcctcctcgtcgtcgccg 112 |||||||||||||| ||||||||| Sbjct: 30129093 tcttcctcctcctcctcgtcgccg 30129070 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 89 tcttcctcctcctcgtcgtcgccg 112 ||||||||||||||||| |||||| Sbjct: 26050127 tcttcctcctcctcgtcctcgccg 26050150 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cctcttcctcctcctcgtcgtcgc 110 |||| ||||||||||||||||||| Sbjct: 4944782 cctcctcctcctcctcgtcgtcgc 4944805
>dbj|AP003409.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1131G08 Length = 158241 Score = 46.1 bits (23), Expect = 0.099 Identities = 29/31 (93%) Strand = Plus / Minus Query: 82 ttccccctcttcctcctcctcgtcgtcgccg 112 |||| |||||||||| ||||||||||||||| Sbjct: 105717 ttcctcctcttcctcatcctcgtcgtcgccg 105687
>dbj|AP003298.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0698H10 Length = 153449 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Plus Query: 87 cctcttcctcctcctcgtcgtcg 109 ||||||||||||||||||||||| Sbjct: 42680 cctcttcctcctcctcgtcgtcg 42702
>dbj|AP003277.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0518C01 Length = 173555 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Plus Query: 87 cctcttcctcctcctcgtcgtcg 109 ||||||||||||||||||||||| Sbjct: 135535 cctcttcctcctcctcgtcgtcg 135557
>gb|AC093018.4| Oryza sativa chromosome 3 BAC OSJNBb0081B07 genomic sequence, complete sequence Length = 143205 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Plus Query: 87 cctcttcctcctcctcgtcgtcg 109 ||||||||||||||||||||||| Sbjct: 24473 cctcttcctcctcctcgtcgtcg 24495
>dbj|AP003618.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0561B08 Length = 161083 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Plus Query: 87 cctcttcctcctcctcgtcgtcg 109 ||||||||||||||||||||||| Sbjct: 66383 cctcttcctcctcctcgtcgtcg 66405
>dbj|AP005536.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0055M07 Length = 150901 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Minus Query: 91 ttcctcctcctcgtcgtcgccgg 113 ||||||||||||||||||||||| Sbjct: 143111 ttcctcctcctcgtcgtcgccgg 143089
>emb|BX649293.4| Mouse DNA sequence from clone RP23-360N18 on chromosome 2, complete sequence Length = 126043 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Plus Query: 83 tccccctcttcctcctcctcgtc 105 ||||||||||||||||||||||| Sbjct: 49211 tccccctcttcctcctcctcgtc 49233
>dbj|AP004872.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0444A09 Length = 125900 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Minus Query: 91 ttcctcctcctcgtcgtcgccgg 113 ||||||||||||||||||||||| Sbjct: 36555 ttcctcctcctcgtcgtcgccgg 36533
>dbj|AK111324.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-D08, full insert sequence Length = 821 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Minus Query: 87 cctcttcctcctcctcgtcgtcg 109 ||||||||||||||||||||||| Sbjct: 482 cctcttcctcctcctcgtcgtcg 460
>dbj|AK111031.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-H09, full insert sequence Length = 989 Score = 46.1 bits (23), Expect = 0.099 Identities = 29/31 (93%) Strand = Plus / Minus Query: 82 ttccccctcttcctcctcctcgtcgtcgccg 112 |||| |||||||||| ||||||||||||||| Sbjct: 516 ttcctcctcttcctcatcctcgtcgtcgccg 486
>dbj|AK109536.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-D01, full insert sequence Length = 1898 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Plus Query: 87 cctcttcctcctcctcgtcgtcg 109 ||||||||||||||||||||||| Sbjct: 32 cctcttcctcctcctcgtcgtcg 54
>dbj|AK064649.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-D10, full insert sequence Length = 697 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Minus Query: 92 tcctcctcctcgtcgtcgccggt 114 ||||||||||||||||||||||| Sbjct: 640 tcctcctcctcgtcgtcgccggt 618
>dbj|AP003256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0460E08 Length = 170021 Score = 46.1 bits (23), Expect = 0.099 Identities = 29/31 (93%) Strand = Plus / Minus Query: 82 ttccccctcttcctcctcctcgtcgtcgccg 112 |||| |||||||||| ||||||||||||||| Sbjct: 16366 ttcctcctcttcctcatcctcgtcgtcgccg 16336
>ref|XM_474370.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1197 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 87 cctcttcctcctcctcgtcgtc 108 |||||||||||||||||||||| Sbjct: 848 cctcttcctcctcctcgtcgtc 869
>ref|XM_465978.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1512 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 92 tcctcctcctcgtcgtcgccgg 113 |||||||||||||||||||||| Sbjct: 335 tcctcctcctcgtcgtcgccgg 356
>ref|XM_883416.1| PREDICTED: Bos taurus hypothetical protein LOC619148 (LOC619148), partial mRNA Length = 236 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 87 cctcttcctcctcctcgtcgtc 108 |||||||||||||||||||||| Sbjct: 147 cctcttcctcctcctcgtcgtc 126
>ref|XM_613451.2| PREDICTED: Bos taurus similar to 40S ribosomal protein S9, transcript variant 1 (LOC533892), mRNA Length = 946 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 92 tcctcctcctcgtcgtcgccgg 113 |||||||||||||||||||||| Sbjct: 873 tcctcctcctcgtcgtcgccgg 852
>ref|XM_872766.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S9, transcript variant 9 (LOC533892), mRNA Length = 766 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 92 tcctcctcctcgtcgtcgccgg 113 |||||||||||||||||||||| Sbjct: 693 tcctcctcctcgtcgtcgccgg 672
>ref|XM_864261.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S9, transcript variant 3 (LOC533892), mRNA Length = 738 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 92 tcctcctcctcgtcgtcgccgg 113 |||||||||||||||||||||| Sbjct: 665 tcctcctcctcgtcgtcgccgg 644
>ref|XM_872555.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S9, transcript variant 8 (LOC533892), mRNA Length = 910 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 92 tcctcctcctcgtcgtcgccgg 113 |||||||||||||||||||||| Sbjct: 837 tcctcctcctcgtcgtcgccgg 816
>ref|XM_872464.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S9, transcript variant 7 (LOC533892), mRNA Length = 740 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 92 tcctcctcctcgtcgtcgccgg 113 |||||||||||||||||||||| Sbjct: 667 tcctcctcctcgtcgtcgccgg 646
>ref|XM_872253.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S9, transcript variant 5 (LOC533892), mRNA Length = 551 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 92 tcctcctcctcgtcgtcgccgg 113 |||||||||||||||||||||| Sbjct: 478 tcctcctcctcgtcgtcgccgg 457
>ref|XM_872145.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S9, transcript variant 4 (LOC533892), mRNA Length = 1356 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 92 tcctcctcctcgtcgtcgccgg 113 |||||||||||||||||||||| Sbjct: 1283 tcctcctcctcgtcgtcgccgg 1262
>ref|XM_613602.2| PREDICTED: Bos taurus similar to serine/arginine repetitive matrix 2 (LOC534002), mRNA Length = 1111 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 87 cctcttcctcctcctcgtcgtc 108 |||||||||||||||||||||| Sbjct: 134 cctcttcctcctcctcgtcgtc 155
>ref|XM_959887.1| Neurospora crassa OR74A hypothetical protein (NCU03121.1) partial mRNA Length = 2727 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 87 cctcttcctcctcctcgtcgtc 108 |||||||||||||||||||||| Sbjct: 2162 cctcttcctcctcctcgtcgtc 2183
>ref|XM_330556.1| Neurospora crassa OR74A hypothetical protein (NCU03121.1) partial mRNA Length = 2727 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 87 cctcttcctcctcctcgtcgtc 108 |||||||||||||||||||||| Sbjct: 2162 cctcttcctcctcctcgtcgtc 2183
>gb|AC138714.4| Mus musculus chromosome 18 clone RP23-406C12, complete sequence Length = 191928 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 87 cctcttcctcctcctcgtcgtc 108 |||||||||||||||||||||| Sbjct: 9955 cctcttcctcctcctcgtcgtc 9976
>gb|AY353563.1| Anopheles gambiae relish mRNA, complete cds Length = 3753 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 87 cctcttcctcctcctcgtcgtc 108 |||||||||||||||||||||| Sbjct: 3081 cctcttcctcctcctcgtcgtc 3060
>emb|AL031685.18|HS963K23 Human DNA sequence from clone RP5-963K23 on chromosome 20q13.11-13.2 Contains the KRT18P4 gene for keratin 18 pseudogene 4, a Cytoskeletal 18 (Cytokeratin 18, CK18, CYK18)) pseudogene, the ZNF313 gene for zinc finger protein 313, the SPATA2 gene for spermatogenesis associated protein 2, the 3' end of the SLC9A8 gene for solute carrier family 9 (sodium/hydrogen exchanger) isoform 8 and four CpG islands, complete sequence Length = 115935 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 154 caggtggtggggagggggacgg 175 |||||||||||||||||||||| Sbjct: 39732 caggtggtggggagggggacgg 39711
>ref|XM_788228.1| PREDICTED: Strongylocentrotus purpuratus similar to Nuclear receptor corepressor 1 (N-CoR1) (N-CoR) (Retinoid X receptor interacting protein 13) (RIP13) (LOC588549), mRNA Length = 8205 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 87 cctcttcctcctcctcgtcgtc 108 |||||||||||||||||||||| Sbjct: 7877 cctcttcctcctcctcgtcgtc 7898
>emb|AL939104.1|SCO939104 Streptomyces coelicolor A3(2) complete genome; segment 1/29 Length = 299050 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 86 ccctcttcctcctcctcgtcgtcgcc 111 ||||| |||||||||||||||||||| Sbjct: 237803 ccctcgtcctcctcctcgtcgtcgcc 237778
>emb|AL606456.2|OSJN00017 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0017I01, complete sequence Length = 133331 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 87 cctcttcctcctcctcgtcgtc 108 |||||||||||||||||||||| Sbjct: 47724 cctcttcctcctcctcgtcgtc 47703
>emb|AJ005042.2|CAAJ5042 Cicer arietinum mRNA for beta-galactosidase (clone CanBGal-3) Length = 2783 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 334 gatgtaattgagacatatgtcttttggaatgggcatga 371 ||||| ||| |||||||||| ||||||||||| ||||| Sbjct: 369 gatgttattcagacatatgtgttttggaatggacatga 406
>gb|AC153145.4| Mus musculus BAC clone RP23-222C3 from chromosome 18, complete sequence Length = 193382 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 87 cctcttcctcctcctcgtcgtc 108 |||||||||||||||||||||| Sbjct: 9955 cctcttcctcctcctcgtcgtc 9976
>dbj|AK036080.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:9630033B02 product:unclassifiable, full insert sequence Length = 3843 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 87 cctcttcctcctcctcgtcgtc 108 |||||||||||||||||||||| Sbjct: 2121 cctcttcctcctcctcgtcgtc 2142
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 87 cctcttcctcctcctcgtcgtc 108 |||||||||||||||||||||| Sbjct: 34742163 cctcttcctcctcctcgtcgtc 34742142 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 cctcctcctcgtcgtcgccgg 113 ||||||||||||||||||||| Sbjct: 31102703 cctcctcctcgtcgtcgccgg 31102683 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 ccctcttcctcctcctcgtcgtcg 109 ||||||||||||||||| |||||| Sbjct: 34177091 ccctcttcctcctcctcctcgtcg 34177068 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 tcctcctcctcgtcgtcgcc 111 |||||||||||||||||||| Sbjct: 34177082 tcctcctcctcgtcgtcgcc 34177063
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 87 cctcttcctcctcctcgtcgtcgccg 112 |||| ||||||||||||||||||||| Sbjct: 13009675 cctcctcctcctcctcgtcgtcgccg 13009650 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 tcctcctcctcgtcgtcgcc 111 |||||||||||||||||||| Sbjct: 24245026 tcctcctcctcgtcgtcgcc 24245045 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 83 tccccctcttcctcctcctcgtcg 106 |||||||| ||||||||||||||| Sbjct: 21751515 tccccctcctcctcctcctcgtcg 21751492 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tccccctcttcctcctcctc 102 |||||||||||||||||||| Sbjct: 7820480 tccccctcttcctcctcctc 7820461
>dbj|AB190364.1| Pyrus pyrifolia PpGAL3 mRNA for beta-D-galactosidase, complete cds Length = 2845 Score = 44.1 bits (22), Expect = 0.39 Identities = 37/42 (88%) Strand = Plus / Plus Query: 334 gatgtaattgagacatatgtcttttggaatgggcatgaacca 375 ||||| |||||||| ||||| ||||||||||| || |||||| Sbjct: 325 gatgtgattgagacgtatgtgttttggaatggccacgaacca 366
>dbj|AP003728.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0710B08 Length = 186991 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 89 tcttcctcctcctcgtcgtcgc 110 |||||||||||||||||||||| Sbjct: 157127 tcttcctcctcctcgtcgtcgc 157106
>dbj|AP003723.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0003H08 Length = 142068 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 89 tcttcctcctcctcgtcgtcgc 110 |||||||||||||||||||||| Sbjct: 8541 tcttcctcctcctcgtcgtcgc 8520
>dbj|AP006850.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, fosmid clone:OSJNOa257A21 Length = 34833 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 92 tcctcctcctcgtcgtcgccgg 113 |||||||||||||||||||||| Sbjct: 29376 tcctcctcctcgtcgtcgccgg 29355
>dbj|AP005247.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0077F02 Length = 172442 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 87 cctcttcctcctcctcgtcgtcgccg 112 |||| ||||||||||||||||||||| Sbjct: 83972 cctcctcctcctcctcgtcgtcgccg 83947
>dbj|AP005845.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0461D06 Length = 112895 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 92 tcctcctcctcgtcgtcgccgg 113 |||||||||||||||||||||| Sbjct: 8667 tcctcctcctcgtcgtcgccgg 8646
>emb|AJ301662.2|LSE301662 Lucilia sericata hb gene for Hunchback protein Length = 2373 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 87 cctcttcctcctcctcgtcgtc 108 |||||||||||||||||||||| Sbjct: 1717 cctcttcctcctcctcgtcgtc 1696
>dbj|AK109942.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-F01, full insert sequence Length = 1322 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 87 cctcttcctcctcctcgtcgtc 108 |||||||||||||||||||||| Sbjct: 866 cctcttcctcctcctcgtcgtc 887
>dbj|AK071465.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023098E17, full insert sequence Length = 1954 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 89 tcttcctcctcctcgtcgtcgc 110 |||||||||||||||||||||| Sbjct: 66 tcttcctcctcctcgtcgtcgc 87
>dbj|AK068281.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146J12, full insert sequence Length = 1512 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 92 tcctcctcctcgtcgtcgccgg 113 |||||||||||||||||||||| Sbjct: 335 tcctcctcctcgtcgtcgccgg 356
>emb|AL732353.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0801D08, complete sequence Length = 103264 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 87 cctcttcctcctcctcgtcgtc 108 |||||||||||||||||||||| Sbjct: 84347 cctcttcctcctcctcgtcgtc 84326
>gb|AC147989.4| Mus musculus BAC clone RP24-468I14 from 18, complete sequence Length = 204168 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 87 cctcttcctcctcctcgtcgtc 108 |||||||||||||||||||||| Sbjct: 80889 cctcttcctcctcctcgtcgtc 80868
>ref|NM_105452.1| Arabidopsis thaliana ATP binding AT1G67840 transcript variant AT1G67840.1 mRNA, complete cds Length = 2126 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 tcttcctcctcctcgtcgtcg 109 ||||||||||||||||||||| Sbjct: 178 tcttcctcctcctcgtcgtcg 198
>ref|NM_202372.1| Arabidopsis thaliana ATP binding AT1G67840 transcript variant AT1G67840.2 mRNA, complete cds Length = 2130 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 tcttcctcctcctcgtcgtcg 109 ||||||||||||||||||||| Sbjct: 178 tcttcctcctcctcgtcgtcg 198
>ref|NM_120941.1| Arabidopsis thaliana unknown protein AT5G08550 mRNA, complete cds Length = 2727 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 tcttcctcctcctcgtcgtcg 109 ||||||||||||||||||||| Sbjct: 188 tcttcctcctcctcgtcgtcg 168
>gb|AC168206.7| Mus musculus chromosome 1, clone RP23-17B20, complete sequence Length = 245358 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 215291 ttccccctcttcctcctcctc 215271
>ref|XM_483489.1| Oryza sativa (japonica cultivar-group), mRNA Length = 612 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 35 ttccccctcttcctcctcctc 15
>ref|XM_480123.1| Oryza sativa (japonica cultivar-group), mRNA Length = 678 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 88 ctcttcctcctcctcgtcgtc 108 ||||||||||||||||||||| Sbjct: 537 ctcttcctcctcctcgtcgtc 517
>ref|XM_466389.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2633 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 50 cctcgccgccgccctcgcgat 70 ||||||||||||||||||||| Sbjct: 61 cctcgccgccgccctcgcgat 81
>ref|XM_464603.1| Oryza sativa (japonica cultivar-group), mRNA Length = 279 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 cctcttcctcctcctcgtcgtcgcc 111 |||| |||||||||||||||||||| Sbjct: 39 cctcgtcctcctcctcgtcgtcgcc 63
>ref|NM_190210.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2247 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 86 ccctcttcctcctcctcgtcgtcgc 110 ||||| ||||||||||||||||||| Sbjct: 1166 ccctcctcctcctcctcgtcgtcgc 1142
>ref|NM_189785.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 843 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 gtggtggggagggggacggat 177 ||||||||||||||||||||| Sbjct: 86 gtggtggggagggggacggat 66
>gb|AC133489.32| Mus musculus strain C57BL/6J clone rp23-74a5, complete sequence Length = 225524 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 102724 ttccccctcttcctcctcctc 102704
>gb|DP000014.1| Callithrix jacchus target 1 genomic scaffold Length = 1952403 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 1219240 ttccccctcttcctcctcctc 1219220
>gb|AC093088.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1001_G01, complete sequence Length = 122768 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 92 tcctcctcctcgtcgtcgccg 112 ||||||||||||||||||||| Sbjct: 51673 tcctcctcctcgtcgtcgccg 51653
>gb|AC099582.7| Mus musculus chromosome 1, clone RP23-188D7, complete sequence Length = 192016 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 63705 ttccccctcttcctcctcctc 63725
>gb|AC144460.31| Mus musculus strain C57BL/6J clone rp23-109m13, complete sequence Length = 212991 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 205413 ttccccctcttcctcctcctc 205393
>gb|AC112898.5| Rattus norvegicus 2 BAC CH230-157M2 (Children's Hospital Oakland Research Institute) complete sequence Length = 213379 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 92663 ttccccctcttcctcctcctc 92643
>gb|AC116527.18| Mus musculus chromosome 16, clone RP24-354B8, complete sequence Length = 165306 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 70699 ttccccctcttcctcctcctc 70719
>ref|XM_322850.1| Neurospora crassa OR74A hypothetical protein (NCU09993.1) partial mRNA Length = 5538 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 tcttcctcctcctcgtcgtcg 109 ||||||||||||||||||||| Sbjct: 2075 tcttcctcctcctcgtcgtcg 2055
>ref|XM_953209.1| Neurospora crassa OR74A hypothetical protein (NCU09993.1) partial mRNA Length = 5538 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 tcttcctcctcctcgtcgtcg 109 ||||||||||||||||||||| Sbjct: 2075 tcttcctcctcctcgtcgtcg 2055
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 44 tggccgcctcgccgccgccctcgcg 68 |||||||| |||||||||||||||| Sbjct: 461199 tggccgccgcgccgccgccctcgcg 461223
>gb|AC129205.3| Mus musculus BAC clone RP24-235I5 from chromosome 19, complete sequence Length = 165024 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 145156 ttccccctcttcctcctcctc 145136
>gb|AC124749.5| Mus musculus BAC clone RP23-262G23 from chromosome 5, complete sequence Length = 209986 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 207162 ttccccctcttcctcctcctc 207182
>gb|AC138791.3| Mus musculus BAC clone RP23-222G6 from chromosome 7, complete sequence Length = 203288 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 164093 ttccccctcttcctcctcctc 164113
>gb|AC137154.2| Mus musculus BAC clone RP24-572L22 from chromosome 5, complete sequence Length = 173460 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 28827 ttccccctcttcctcctcctc 28847
>gb|AC134166.2| Rattus norvegicus 2 BAC CH230-355N20 (Children's Hospital Oakland Research Institute) complete sequence Length = 191583 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 10306 ttccccctcttcctcctcctc 10326
>gb|AC126426.3| Mus musculus BAC clone RP24-291G13 from chromosome 13, complete sequence Length = 201051 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 122732 ttccccctcttcctcctcctc 122752 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 tccccctcttcctcctcctc 102 |||||||||||||||||||| Sbjct: 79709 tccccctcttcctcctcctc 79728
>emb|CR955005.2| Medicago truncatula chromosome 5 clone mte1-58c24, COMPLETE SEQUENCE Length = 106497 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 334 gatgtaattgagacatatgtcttttggaatgggcatgaacc 374 ||||||||||| || ||||| |||||||||| |||||||| Sbjct: 11601 gatgtaattgaaacctatgtgttttggaatgttcatgaacc 11641
>gb|AC124691.4| Mus musculus BAC clone RP24-158O8 from chromosome 15, complete sequence Length = 176829 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 124194 ttccccctcttcctcctcctc 124174
>gb|AC131103.4| Mus musculus BAC clone RP23-213K14 from chromosome 19, complete sequence Length = 210370 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 170113 ttccccctcttcctcctcctc 170093
>ref|XM_804234.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053507663.70) partial mRNA Length = 2064 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 87 cctcttcctcctcctcgtcgtcgcc 111 |||||||||||||||| |||||||| Sbjct: 109 cctcttcctcctcctcttcgtcgcc 85
>gb|AC138288.13| Mus musculus chromosome 9, clone RP23-464K22, complete sequence Length = 235544 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 190784 ttccccctcttcctcctcctc 190804
>emb|X68111.1|HSLIPLP H.sapiens 5'-flanking region of gene for lipoprotein lipase Length = 1925 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 1730 ttccccctcttcctcctcctc 1750
>gb|AC123030.4| Mus musculus BAC clone RP24-573I5 from chromosome 7, complete sequence Length = 173971 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 152482 ttccccctcttcctcctcctc 152502
>gb|AC113316.14| Mus musculus chromosome 5, clone RP23-441I24, complete sequence Length = 247892 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 90552 ttccccctcttcctcctcctc 90532
>gb|AC115755.8| Mus musculus chromosome 15, clone RP23-47L17, complete sequence Length = 123355 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 26916 ttccccctcttcctcctcctc 26936
>gb|AC101882.14| Mus musculus chromosome 10, clone RP23-394M6, complete sequence Length = 209838 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 88276 ttccccctcttcctcctcctc 88296
>gb|AC121235.20| Medicago truncatula clone mth2-21k24, complete sequence Length = 116205 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 346 acatatgtcttttggaatgggcatgaacc 374 |||||||| ||||||||||| |||||||| Sbjct: 13312 acatatgtattttggaatggtcatgaacc 13340
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 37 ctggccatggccgcctcgccg 57 ||||||||||||||||||||| Sbjct: 4725586 ctggccatggccgcctcgccg 4725606
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 cgcctcgccgccgccctcgcg 68 ||||||||||||||||||||| Sbjct: 2397390 cgcctcgccgccgccctcgcg 2397370
>gb|AC117659.7| Mus musculus, clone RP23-316N7, complete sequence Length = 196981 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 128346 ttccccctcttcctcctcctc 128326
>gb|AC097257.7| Rattus norvegicus X BAC CH230-180I13 (Children's Hospital Oakland Research Institute) complete sequence Length = 196137 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 185499 ttccccctcttcctcctcctc 185519
>gb|AC115452.4| Rattus norvegicus 7 BAC CH230-309G3 (Children's Hospital Oakland Research Institute) complete sequence Length = 169133 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 92817 ttccccctcttcctcctcctc 92797
>gb|AC133618.3| Rattus norvegicus 18 BAC CH230-71N8 (Children's Hospital Oakland Research Institute) complete sequence Length = 234684 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 150282 ttccccctcttcctcctcctc 150302
>emb|BX023738.1|CNS08QHA Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA36BA07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 683 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 87 cctcttcctcctcctcgtcgt 107 ||||||||||||||||||||| Sbjct: 222 cctcttcctcctcctcgtcgt 202
>emb|BX015642.1|CNS08K8E Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA23CA04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 975 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 87 cctcttcctcctcctcgtcgt 107 ||||||||||||||||||||| Sbjct: 287 cctcttcctcctcctcgtcgt 267
>ref|XM_794855.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC577181 (LOC577181), mRNA Length = 1008 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 601 ttccccctcttcctcctcctc 581
>gb|AC163090.5| Mus musculus chromosome 8, clone RP23-457I3, complete sequence Length = 195979 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 133787 ttccccctcttcctcctcctc 133807
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 44 tggccgcctcgccgccgccctcgcg 68 |||||||| |||||||||||||||| Sbjct: 1780465 tggccgccgcgccgccgccctcgcg 1780489
>emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070C17, complete sequence Length = 160484 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 cctcctcctcgtcgtcgccgg 113 ||||||||||||||||||||| Sbjct: 84784 cctcctcctcgtcgtcgccgg 84764
>emb|AL731866.8| Mouse DNA sequence from clone RP23-37F22 on chromosome 11 Contains the 5' end of a variant of the Ccl1 gene for chemokine (C-C motif) ligand 1, complete sequence Length = 105085 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 36083 ttccccctcttcctcctcctc 36103
>emb|AL592080.26| Mouse DNA sequence from clone RP23-102H10 on chromosome 11 Contains a endothelial differentiation-related factor 1 (Edf1) pseudogene, the 3' end of the gene for a novel protein similar to human sperm antigen HCMOGT-1 (B230396K10Rik) and a CpG island, complete sequence Length = 216023 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 58666 ttccccctcttcctcctcctc 58686 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 58493 ttccccctcttcctcctcctc 58513 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 58323 ttccccctcttcctcctcctc 58343 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 58290 ttccccctcttcctcctcctc 58310
>emb|BX640962.1|HSM807113 Homo sapiens mRNA; cDNA DKFZp686D13148 (from clone DKFZp686D13148) Length = 959 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 307 ttccccctcttcctcctcctc 327
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 ccatggccgcctcgccgccgc 61 ||||||||||||||||||||| Sbjct: 2833441 ccatggccgcctcgccgccgc 2833461
>gb|AC148346.12| Medicago truncatula clone mth2-25m19, complete sequence Length = 122590 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 346 acatatgtcttttggaatgggcatgaacc 374 |||||||| ||||||||||| |||||||| Sbjct: 118038 acatatgtattttggaatggtcatgaacc 118066
>gb|AC111654.6| Rattus norvegicus Chr BAC CH230-108G17 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 231706 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 24474 ttccccctcttcctcctcctc 24494
>dbj|AK092286.1| Homo sapiens cDNA FLJ34967 fis, clone NTONG2004690, highly similar to LIPOPROTEIN LIPASE PRECURSOR (EC 3.1.1.34) Length = 2385 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 12 ttccccctcttcctcctcctc 32
>gb|AC136451.9| Medicago truncatula clone mth2-17d19, complete sequence Length = 132473 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Minus Query: 334 gatgtaattgagacatatgtcttttggaatgggcatgaacc 374 ||||||||||| || ||||| |||||||||| |||||||| Sbjct: 433 gatgtaattgaaacctatgtgttttggaatgttcatgaacc 393
>gb|AC127170.11| Medicago truncatula clone mth2-35d10, complete sequence Length = 114143 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Minus Query: 334 gatgtaattgagacatatgtcttttggaatgggcatgaacc 374 ||||| ||||| || ||||| ||||||||||| |||||||| Sbjct: 74018 gatgtgattgaaacctatgtattttggaatggacatgaacc 73978
>gb|AC107964.4| Homo sapiens chromosome 8, clone CTD-2328I8, complete sequence Length = 138594 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 2290 ttccccctcttcctcctcctc 2270
>dbj|AK143898.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:F520007I05 product:hypothetical protein, full insert sequence Length = 3614 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 1719 ttccccctcttcctcctcctc 1699
>gb|AC100802.2| Homo sapiens chromosome 8, clone CTB-2109K7, complete sequence Length = 203506 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 18134 ttccccctcttcctcctcctc 18154
>gb|AC156951.7| Mus musculus 6 BAC RP24-339D12 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 142364 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 98912 ttccccctcttcctcctcctc 98932
>gb|AC159542.8| Mus musculus 10 BAC RP23-137B10 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 198525 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 22187 ttccccctcttcctcctcctc 22207
>gb|S58235.1| lipoprotein lipase {5' flanking region, exon 1} [human, Genomic, 200 nt] Length = 200 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 152 ttccccctcttcctcctcctc 172
>gb|AY177701.1| Oryza sativa (japonica cultivar-group) transcription factor MADS37 mRNA, partial cds Length = 257 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 81 ttccccctcttcctcctcctc 61
>gb|AY049244.1| Arabidopsis thaliana At1g67840/F12A21_3 mRNA, complete cds Length = 2126 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 tcttcctcctcctcgtcgtcg 109 ||||||||||||||||||||| Sbjct: 178 tcttcctcctcctcgtcgtcg 198
>gb|AC134845.5| Mus musculus BAC clone RP24-424K5 from chromosome 1, complete sequence Length = 194449 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 80976 ttccccctcttcctcctcctc 80996
>gb|AC146885.3| Callithrix jacchus clone CH259-349L5, complete sequence Length = 213940 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 64332 ttccccctcttcctcctcctc 64312
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 44 tggccgcctcgccgccgccctcgcg 68 |||||||| |||||||||||||||| Sbjct: 1003489 tggccgccgcgccgccgccctcgcg 1003465
>gb|AY029226.1| Capsicum annuum beta-galactosidase (BG1) mRNA, complete cds Length = 2629 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 334 gatgtaattgagacatatgtcttttggaatgggcatgaacc 374 ||||| ||||| || ||||| ||||||||||| |||||||| Sbjct: 217 gatgttattgaaacttatgttttttggaatggacatgaacc 257
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 40 gccatggccgcctcgccgccg 60 ||||||||||||||||||||| Sbjct: 6904726 gccatggccgcctcgccgccg 6904706 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ctcctcctcgtcgtcgccgg 113 |||||||||||||||||||| Sbjct: 12231190 ctcctcctcgtcgtcgccgg 12231171
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 26512096 ttccccctcttcctcctcctc 26512076 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 ctcttcctcctcctcgtcgtc 108 ||||||||||||||||||||| Sbjct: 2962159 ctcttcctcctcctcgtcgtc 2962179 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 89 tcttcctcctcctcgtcgtcgccg 112 ||||||||||||||| |||||||| Sbjct: 26719918 tcttcctcctcctcgacgtcgccg 26719895 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 cttcctcctcctcgtcgtcg 109 |||||||||||||||||||| Sbjct: 11396683 cttcctcctcctcgtcgtcg 11396702 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 cctcttcctcctcctcgtcg 106 |||||||||||||||||||| Sbjct: 958522 cctcttcctcctcctcgtcg 958541
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 92 tcctcctcctcgtcgtcgccg 112 ||||||||||||||||||||| Sbjct: 1096062 tcctcctcctcgtcgtcgccg 1096042 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 cttcctcctcctcgtcgtcg 109 |||||||||||||||||||| Sbjct: 6949488 cttcctcctcctcgtcgtcg 6949469
>gb|AC012354.11| Homo sapiens BAC clone RP11-89K21 from 2, complete sequence Length = 171167 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 45452 ttccccctcttcctcctcctc 45432
>emb|BX817045.1|CNS0ADYC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH82ZC03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2048 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 tcttcctcctcctcgtcgtcg 109 ||||||||||||||||||||| Sbjct: 166 tcttcctcctcctcgtcgtcg 186
>emb|BX814127.1|CNS0ABZM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB58ZE06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2057 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 tcttcctcctcctcgtcgtcg 109 ||||||||||||||||||||| Sbjct: 132 tcttcctcctcctcgtcgtcg 152
>dbj|AK222464.1| Homo sapiens mRNA for lipoprotein lipase precursor variant, clone: adKA01636 Length = 2044 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 9 ttccccctcttcctcctcctc 29
>gb|AC008113.4|AC008113 Genomic sequence for Arabidopsis thaliana BAC F12A21 from chromosome I, complete sequence Length = 114190 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 tcttcctcctcctcgtcgtcg 109 ||||||||||||||||||||| Sbjct: 9085 tcttcctcctcctcgtcgtcg 9065
>dbj|AP004368.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1139B11 Length = 136548 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 gtggtggggagggggacggat 177 ||||||||||||||||||||| Sbjct: 5052 gtggtggggagggggacggat 5032
>dbj|AP003683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0431G06 Length = 140466 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 gtggtggggagggggacggat 177 ||||||||||||||||||||| Sbjct: 120324 gtggtggggagggggacggat 120304
>gb|AC160012.1| Medicago truncatula chromosome 2 BAC clone mth2-168l8, complete sequence Length = 145061 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Minus Query: 334 gatgtaattgagacatatgtcttttggaatgggcatgaacc 374 ||||| ||||| || ||||| ||||||||||| |||||||| Sbjct: 126844 gatgtgattgaaacctatgtattttggaatggacatgaacc 126804
>ref|NM_198884.1| Mus musculus beta-1,4-N-acetyl-galactosaminyl transferase 3 (B4galnt3), mRNA Length = 2961 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 1803 ttccccctcttcctcctcctc 1783
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 45 ggccgcctcgccgccgccctc 65 ||||||||||||||||||||| Sbjct: 509195 ggccgcctcgccgccgccctc 509215
>ref|XM_345513.1| PREDICTED: Rattus norvegicus similar to hypothetical GTP-binding protein RAGD (LOC366342), mRNA Length = 330 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 92 tcctcctcctcgtcgtcgccg 112 ||||||||||||||||||||| Sbjct: 65 tcctcctcctcgtcgtcgccg 45
>ref|XM_216363.3| PREDICTED: Rattus norvegicus Ras-related GTP binding D (predicted) (Rragd_predicted), mRNA Length = 1209 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 92 tcctcctcctcgtcgtcgccg 112 ||||||||||||||||||||| Sbjct: 74 tcctcctcctcgtcgtcgccg 54
>dbj|AP003431.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1099D03 Length = 191022 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 86 ccctcttcctcctcctcgtcgtcgc 110 ||||| ||||||||||||||||||| Sbjct: 107549 ccctcctcctcctcctcgtcgtcgc 107573
>dbj|AP005116.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0703B01 Length = 137445 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 50 cctcgccgccgccctcgcgat 70 ||||||||||||||||||||| Sbjct: 70840 cctcgccgccgccctcgcgat 70860
>gb|AF229794.1|AF229794 Vigna radiata beta galactosidase mRNA, complete cds Length = 2166 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 334 gatgtaattgagacatatgtcttttggaatgggcatgaacc 374 ||||| ||| |||| ||||| ||||||||||| |||||||| Sbjct: 205 gatgtcattcagacctatgttttttggaatggtcatgaacc 245
>dbj|AP004085.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1267_F10 Length = 162669 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 87 cctcttcctcctcctcgtcgtcgcc 111 |||| |||||||||||||||||||| Sbjct: 58072 cctcgtcctcctcctcgtcgtcgcc 58048
>dbj|AP004729.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0006A22 Length = 190690 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 92 tcctcctcctcgtcgtcgccg 112 ||||||||||||||||||||| Sbjct: 149799 tcctcctcctcgtcgtcgccg 149779
>dbj|AB080296.2| Capsicum annuum PBG1 mRNA for beta-galactosidase, complete cds Length = 2384 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 334 gatgtaattgagacatatgtcttttggaatgggcatgaacc 374 ||||| ||||| || ||||| ||||||||||| |||||||| Sbjct: 216 gatgttattgaaacttatgttttttggaatggacatgaacc 256
>dbj|AP005386.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0019I19 Length = 164483 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 88 ctcttcctcctcctcgtcgtcgccg 112 |||||||||||||||| |||||||| Sbjct: 39942 ctcttcctcctcctcgccgtcgccg 39918
>dbj|AP005453.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0453H04 Length = 175047 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 85 cccctcttcctcctcctcgtcgtcg 109 |||||| |||||||||||||||||| Sbjct: 112936 cccctcctcctcctcctcgtcgtcg 112960
>dbj|AP006156.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1043F11 Length = 167137 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 40 gccatggccgcctcgccgccg 60 ||||||||||||||||||||| Sbjct: 132621 gccatggccgcctcgccgccg 132601
>emb|BX572082.4| Mouse DNA sequence from clone RP23-114B24 on chromosome X, complete sequence Length = 88681 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 79391 ttccccctcttcctcctcctc 79411
>emb|AL672124.13| Mouse DNA sequence from clone RP23-392H8 on chromosome X, complete sequence Length = 197404 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 61864 ttccccctcttcctcctcctc 61844
>gb|AC116892.10| Mus musculus chromosome 8, clone RP24-529J16, complete sequence Length = 176340 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 63434 ttccccctcttcctcctcctc 63454
>dbj|AP005529.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0702E04 Length = 190948 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 60963 ttccccctcttcctcctcctc 60943
>dbj|AP004461.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0443G08 Length = 162139 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 ctcttcctcctcctcgtcgtc 108 ||||||||||||||||||||| Sbjct: 135221 ctcttcctcctcctcgtcgtc 135241
>dbj|AB006697.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MAH20 Length = 80970 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 tcttcctcctcctcgtcgtcg 109 ||||||||||||||||||||| Sbjct: 37618 tcttcctcctcctcgtcgtcg 37638
>dbj|AB114826.1| Mus musculus beta4GalNAcT3 mRNA for beta1,4-N-acetylgalactosaminyltransferase III, complete cds Length = 2961 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 1803 ttccccctcttcctcctcctc 1783
>dbj|AP005467.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1349_D05 Length = 174478 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 ctcttcctcctcctcgtcgtc 108 ||||||||||||||||||||| Sbjct: 12882 ctcttcctcctcctcgtcgtc 12902
>dbj|AK104427.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-A04, full insert sequence Length = 1207 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 93 cctcctcctcgtcgtcgccgg 113 ||||||||||||||||||||| Sbjct: 86 cctcctcctcgtcgtcgccgg 106
>dbj|AK104335.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-A01, full insert sequence Length = 1268 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 gtggtggggagggggacggat 177 ||||||||||||||||||||| Sbjct: 180 gtggtggggagggggacggat 160
>dbj|AK099974.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128D08, full insert sequence Length = 2633 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 50 cctcgccgccgccctcgcgat 70 ||||||||||||||||||||| Sbjct: 61 cctcgccgccgccctcgcgat 81
>dbj|AK099008.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120E14, full insert sequence Length = 1218 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 93 cctcctcctcgtcgtcgccgg 113 ||||||||||||||||||||| Sbjct: 59 cctcctcctcgtcgtcgccgg 79
>dbj|AK098998.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013104D16, full insert sequence Length = 1308 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 cctcctcctcgtcgtcgccgg 113 ||||||||||||||||||||| Sbjct: 93 cctcctcctcgtcgtcgccgg 73
>dbj|AK066545.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013069A19, full insert sequence Length = 2291 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 85 cccctcttcctcctcctcgtcgtcg 109 |||||| |||||||||||||||||| Sbjct: 111 cccctcctcctcctcctcgtcgtcg 135
>ref|NM_208355.1| Eremothecium gossypii ABR056Cp (ABR056C), mRNA Length = 1470 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 ccgcctcgccgccgccctcgc 67 ||||||||||||||||||||| Sbjct: 1251 ccgcctcgccgccgccctcgc 1271
>dbj|AK065709.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013039J02, full insert sequence Length = 1374 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 gtggtggggagggggacggat 177 ||||||||||||||||||||| Sbjct: 179 gtggtggggagggggacggat 159
>dbj|AK060707.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-H03, full insert sequence Length = 1262 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 93 cctcctcctcgtcgtcgccgg 113 ||||||||||||||||||||| Sbjct: 84 cctcctcctcgtcgtcgccgg 104
>gb|AY104533.1| Zea mays PCO122904 mRNA sequence Length = 974 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 297 gcctagtataattgcaaagtg 317 ||||||||||||||||||||| Sbjct: 726 gcctagtataattgcaaagtg 746
>gb|U76895.1|TAU76895 Triticum aestivum beta-tubulin 4 (Tubb4) mRNA, complete cds Length = 1866 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 87 cctcttcctcctcctcgtcgt 107 ||||||||||||||||||||| Sbjct: 1408 cctcttcctcctcctcgtcgt 1388
>gb|AC166165.3| Mus musculus BAC clone RP23-381I17 from chromosome 10, complete sequence Length = 217425 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 851 ttccccctcttcctcctcctc 831
>gb|AC132232.6| Mus musculus BAC clone RP24-489N16 from chromosome 10, complete sequence Length = 166451 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 42475 ttccccctcttcctcctcctc 42495
>gb|AY685117.1| Oryza sativa (japonica cultivar-group) transcription factor AP2D23-like (AP2D23) mRNA, complete cds Length = 1539 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 92 tcctcctcctcgtcgtcgccg 112 ||||||||||||||||||||| Sbjct: 1378 tcctcctcctcgtcgtcgccg 1398
>gb|AC132574.3| Mus musculus BAC clone RP24-421H8 from 1, complete sequence Length = 173036 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 138162 ttccccctcttcctcctcctc 138142
>gb|AC127288.4| Mus musculus BAC clone RP23-358J11 from 8, complete sequence Length = 210710 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 103832 ttccccctcttcctcctcctc 103852
>emb|AL807808.12| Mouse DNA sequence from clone RP23-382D10 on chromosome 4, complete sequence Length = 198460 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 40215 ttccccctcttcctcctcctc 40235
>gb|AC153506.4| Mus musculus 10 BAC RP23-99K2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 185656 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 112710 ttccccctcttcctcctcctc 112730
>gb|AC166175.2| Mus musculus BAC clone RP23-53H1 from chromosome 9, complete sequence Length = 264591 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 161161 ttccccctcttcctcctcctc 161181 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 tccccctcttcctcctcctc 102 |||||||||||||||||||| Sbjct: 105641 tccccctcttcctcctcctc 105660
>gb|AE016815.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome II, complete sequence Length = 867699 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 47 ccgcctcgccgccgccctcgc 67 ||||||||||||||||||||| Sbjct: 498412 ccgcctcgccgccgccctcgc 498392
>emb|AL772264.8| Mouse DNA sequence from clone RP23-15I21 on chromosome 2, complete sequence Length = 189540 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 10155 ttccccctcttcctcctcctc 10135
>gb|M29549.1|HUMLPLA Human lipoprotein lipase (LPL) gene, 5' flank, clone LPL15/E Length = 801 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 742 ttccccctcttcctcctcctc 762
>emb|AL845429.4| Mouse DNA sequence from clone RP23-290O4 on chromosome 2, complete sequence Length = 97626 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 48421 ttccccctcttcctcctcctc 48441
>gb|M26380.1|HUMLPLAA Human lipoprotein lipase (LPL) gene mRNA Length = 756 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 492 ttccccctcttcctcctcctc 512
>emb|AL713840.1|CNS07YOU Mus musculus chromosome 11 region in the Om locus area (D11Mit37-Scya6) clone 425A1 of library Caltech CITB-BAC from chromosome 11 of Mus musculus (mouse) Length = 128620 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 82 ttccccctcttcctcctcctc 102 ||||||||||||||||||||| Sbjct: 101344 ttccccctcttcctcctcctc 101324
>gb|AF115498.2| Xenopus laevis Smad1 antagonistic effector (SANE) mRNA, complete cds Length = 2397 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tcttcctcctcctcgtcgtc 108 |||||||||||||||||||| Sbjct: 545 tcttcctcctcctcgtcgtc 526
>gb|AC102297.12| Mus musculus chromosome 1, clone RP24-392K18, complete sequence Length = 167248 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 tccccctcttcctcctcctc 102 |||||||||||||||||||| Sbjct: 112068 tccccctcttcctcctcctc 112087
>gb|AC101277.16| Mus musculus chromosome 1, clone RP23-101P2, complete sequence Length = 207021 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tccccctcttcctcctcctc 102 |||||||||||||||||||| Sbjct: 162881 tccccctcttcctcctcctc 162862
>gb|AC118213.8| Mus musculus chromosome 1, clone RP24-529B23, complete sequence Length = 133485 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tccccctcttcctcctcctc 102 |||||||||||||||||||| Sbjct: 132875 tccccctcttcctcctcctc 132856
>gb|AC105173.10| Mus musculus chromosome 8, clone RP23-319J15, complete sequence Length = 186945 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 82 ttccccctcttcctcctcctcgtc 105 |||||||||||||||||| ||||| Sbjct: 164255 ttccccctcttcctcctcttcgtc 164232
>ref|XM_632084.1| Dictyostelium discoideum hypothetical protein (DDB0187516), partial mRNA Length = 2955 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tcttcctcctcctcgtcgtc 108 |||||||||||||||||||| Sbjct: 1421 tcttcctcctcctcgtcgtc 1402
>gb|AC152104.2| Ostreococcus sp. CCE9901 clone JGIACFB-9A2, complete sequence Length = 37168 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cctcttcctcctcctcgtcgtcgc 110 |||||||||||||||| ||||||| Sbjct: 18375 cctcttcctcctcctcctcgtcgc 18352
>gb|AC154236.2| Mus musculus BAC clone RP24-160E14 from chromosome 17, complete sequence Length = 162390 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tccccctcttcctcctcctc 102 |||||||||||||||||||| Sbjct: 130807 tccccctcttcctcctcctc 130788
>gb|AC168047.3| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940115D9, complete sequence Length = 108001 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 gccatggccgcctcgccgcc 59 |||||||||||||||||||| Sbjct: 12322 gccatggccgcctcgccgcc 12341
>gb|AC161528.14| Mus musculus chromosome 8, clone RP23-369H18, complete sequence Length = 206302 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 tccccctcttcctcctcctc 102 |||||||||||||||||||| Sbjct: 33061 tccccctcttcctcctcctc 33080
>ref|XM_481298.1| Oryza sativa (japonica cultivar-group), mRNA Length = 216 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 cttcctcctcctcgtcgtcg 109 |||||||||||||||||||| Sbjct: 51 cttcctcctcctcgtcgtcg 70
>ref|XM_483522.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1500 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 89 tcttcctcctcctcgtcgtcgccg 112 ||||||||||||||| |||||||| Sbjct: 494 tcttcctcctcctcgacgtcgccg 517
>ref|XM_507308.1| PREDICTED Oryza sativa (japonica cultivar-group), P0702C09.33 mRNA Length = 1517 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 89 tcttcctcctcctcgtcgtcgccg 112 ||||||||||||||| |||||||| Sbjct: 495 tcttcctcctcctcgacgtcgccg 518
>ref|XM_474283.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 987 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 ccctcttcctcctcctcgtcgtcg 109 ||||||||||||||||| |||||| Sbjct: 545 ccctcttcctcctcctcctcgtcg 522 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 tcctcctcctcgtcgtcgcc 111 |||||||||||||||||||| Sbjct: 536 tcctcctcctcgtcgtcgcc 517
>ref|XM_469898.1| Oryza sativa (japonica cultivar-group), mRNA Length = 162 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 87 cctcttcctcctcctcgtcgtcgccggt 114 |||| |||||||||||||||||| |||| Sbjct: 106 cctcctcctcctcctcgtcgtcgtcggt 79
>ref|XM_467554.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2049 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 89 tcttcctcctcctcgtcgtcgccg 112 |||||||||||||| ||||||||| Sbjct: 299 tcttcctcctcctcctcgtcgccg 276
>ref|XM_467036.1| Oryza sativa (japonica cultivar-group), mRNA Length = 791 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 89 tcttcctcctcctcgtcgtcgccg 112 ||||||||||||||||| |||||| Sbjct: 107 tcttcctcctcctcgtcctcgccg 130
>ref|XM_464400.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1310 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cctcttcctcctcctcgtcgtcgc 110 |||| ||||||||||||||||||| Sbjct: 98 cctcctcctcctcctcgtcgtcgc 121
>ref|XM_450685.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1125 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ctcctcctcgtcgtcgccgg 113 |||||||||||||||||||| Sbjct: 789 ctcctcctcgtcgtcgccgg 770
>ref|NM_196061.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0073L01.22), mRNA Length = 2583 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cctcttcctcctcctcgtcgtcgc 110 ||||||||||||||||| |||||| Sbjct: 772 cctcttcctcctcctcgccgtcgc 749
>gb|AC116498.15| Mus musculus chromosome 15, clone RP24-294J7, complete sequence Length = 183865 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tccccctcttcctcctcctc 102 |||||||||||||||||||| Sbjct: 9608 tccccctcttcctcctcctc 9589
>gb|AC156548.13| Mus musculus chromosome 5, clone RP23-412C8, complete sequence Length = 197890 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tccccctcttcctcctcctc 102 |||||||||||||||||||| Sbjct: 80444 tccccctcttcctcctcctc 80425 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 tccccctcttcctcctcctc 102 |||||||||||||||||||| Sbjct: 63045 tccccctcttcctcctcctc 63064
>ref|XM_469631.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1221 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 gccgcctcgccgccgccctc 65 |||||||||||||||||||| Sbjct: 218 gccgcctcgccgccgccctc 237
>ref|XM_470318.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2278 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 agatgtggcctagtataatt 309 |||||||||||||||||||| Sbjct: 1067 agatgtggcctagtataatt 1048
>ref|NM_185751.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1228 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 tccccctcttcctcctcctcgtcg 106 |||||||| ||||||||||||||| Sbjct: 190 tccccctcctcctcctcctcgtcg 213
>ref|XM_477218.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1598 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tccccctcttcctcctcctc 102 |||||||||||||||||||| Sbjct: 1347 tccccctcttcctcctcctc 1328
>gb|AC167185.4| Mus musculus chromosome 3, clone RP23-355G8, complete sequence Length = 213731 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tccccctcttcctcctcctc 102 |||||||||||||||||||| Sbjct: 62825 tccccctcttcctcctcctc 62806
>gb|AC110880.10| Mus musculus chromosome 7, clone RP24-456G3, complete sequence Length = 162685 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tccccctcttcctcctcctc 102 |||||||||||||||||||| Sbjct: 82490 tccccctcttcctcctcctc 82471 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,511,146 Number of Sequences: 3902068 Number of extensions: 4511146 Number of successful extensions: 188450 Number of sequences better than 10.0: 646 Number of HSP's better than 10.0 without gapping: 680 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 179121 Number of HSP's gapped (non-prelim): 9253 length of query: 455 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 433 effective length of database: 17,147,199,772 effective search space: 7424737501276 effective search space used: 7424737501276 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)