Clone Information

BLAST Search Result

Clone Name	bastl01g11
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	BRE1_DROME (Q9VRP9) Ubiquitin-protein ligase Bre1 (EC 6.3.2.-) (...	42	5e-04
2	BRE1B_MOUSE (Q3U319) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-)...	39	0.002
3	BRE1B_RAT (Q8CJB9) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (...	39	0.002
4	BRE1B_PONPY (Q5RAU7) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-)...	39	0.004
5	BRE1B_HUMAN (O75150) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-)...	39	0.004
6	RAD50_SULSO (Q97WH0) DNA double-strand break repair rad50 ATPase	32	0.28
7	TOPI_DROME (Q9VH70) Testis-specific zinc finger protein topi (Pr...	32	0.37
8	FANCB_HUMAN (Q8NB91) Fanconi anemia group B protein (Protein FAC...	32	0.48
9	FEN_HALSA (Q9HQ27) Flap structure-specific endonuclease (EC 3.1....	32	0.48
10	MUKB_HAEIN (P45187) Chromosome partition protein mukB (Structura...	31	0.63
11	ANT1_ONCVO (P21249) Major antigen (Myosin-like antigen)	30	1.1
12	LUXD1_PHOLE (P21309) Acyl transferase (EC 2.3.1.-) (ACT) (Myrist...	30	1.1
13	MYSP_BOOMI (Q86RN8) Paramyosin	30	1.4
14	MYOJ_DICDI (P54697) Myosin IJ heavy chain	30	1.4
15	SYNE1_HUMAN (Q8NF91) Nesprin-1 (Nuclear envelope spectrin repeat...	30	1.8
16	YWBM_BACSU (P39596) Hypothetical protein ywbM	29	3.1
17	TPM1_LIZAU (P84335) Tropomyosin 1 alpha chain (Alpha-tropomyosin)	29	3.1
18	TPM3_MOUSE (P21107) Tropomyosin alpha-3 chain (Tropomyosin-3) (T...	28	4.1
19	TPM3_HUMAN (P06753) Tropomyosin alpha-3 chain (Tropomyosin-3) (T...	28	4.1
20	MAD1_YARLI (Q6C452) Spindle assembly checkpoint component MAD1 (...	28	4.1
21	GOGB1_HUMAN (Q14789) Golgin subfamily B member 1 (Giantin) (Macr...	28	5.3
22	CP135_MOUSE (Q6P5D4) Centrosomal protein of 135 kDa (Cep135 prot...	28	5.3
23	GOGA5_CAEEL (P90970) Golgin-84	28	5.3
24	HMW2_MYCGE (P47460) Cytadherence high molecular weight protein 2...	28	5.3
25	YBE7_YEAST (P34216) Protein YBL047C	28	5.3
26	DYH5_MOUSE (Q8VHE6) Ciliary dynein heavy chain 5 (Axonemal beta ...	28	7.0
27	SN1L2_MOUSE (Q8CFH6) Serine/threonine-protein kinase SNF1-like k...	28	7.0
28	EEA1_HUMAN (Q15075) Early endosome antigen 1 (Endosome-associate...	28	7.0
29	CP135_HUMAN (Q66GS9) Centrosomal protein of 135 kDa (Cep135 prot...	28	7.0
30	MPEV_SYNPY (Q02178) Bilin biosynthesis protein mpeV	28	7.0
31	PQN25_CAEEL (P41951) Glutamine/asparagine-rich protein pqn-25	28	7.0
32	YNP9_CAEEL (P34562) Hypothetical GRIP and coiled-coil domain-con...	27	9.1
33	MPP9_HUMAN (Q99550) M-phase phosphoprotein 9	27	9.1
34	ARGD1_STAAW (Q8NYM5) Acetylornithine aminotransferase 1 (EC 2.6....	27	9.1
35	ARGD1_STAAS (Q6GCU1) Acetylornithine aminotransferase 1 (EC 2.6....	27	9.1
36	ARGD1_STAAR (Q6GKC1) Acetylornithine aminotransferase 1 (EC 2.6....	27	9.1
37	ARGD1_STAAN (P60296) Acetylornithine aminotransferase 1 (EC 2.6....	27	9.1
38	ARGD1_STAAM (P60295) Acetylornithine aminotransferase 1 (EC 2.6....	27	9.1
39	ARGD1_STAAC (Q5HJI8) Acetylornithine aminotransferase 1 (EC 2.6....	27	9.1
40	ARHGC_HUMAN (Q9NZN5) Rho guanine nucleotide exchange factor 12 (...	27	9.1
41	Y835_RICCN (Q92HD6) Hypothetical UPF0192 protein RC0835 precursor	27	9.1
42	ARHGC_MOUSE (Q8R4H2) Rho guanine nucleotide exchange factor 12 (...	27	9.1
43	RL10_THETN (Q8R7U4) 50S ribosomal protein L10	27	9.1

>BRE1_DROME (Q9VRP9) Ubiquitin-protein ligase Bre1 (EC 6.3.2.-) (dBre1)|
          Length = 1044

 Score = 41.6 bits (96), Expect = 5e-04
 Identities = 21/67 (31%), Positives = 38/67 (56%)
 Frame = +3

Query: 78  KMDATALQHENQKLVQQLEAQKSEMHVLEAKFKELRNEQSSYDNTLISLDKTWNQLVDDL 257
           +MD   L+ +N+KL Q++E +      L  + ++L   Q+  D  L  +++ WNQL +D+
Sbjct: 44  EMDIKVLEFQNKKLAQRIEQRMRTEAELRHRIEQLEKRQTQDDAVLNVVNRYWNQLNEDI 103

Query: 258 ILLGVRF 278
            +L  RF
Sbjct: 104 RVLLQRF 110

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>BRE1B_MOUSE (Q3U319) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING|
           finger protein 40)
          Length = 1001

 Score = 39.3 bits (90), Expect = 0.002
 Identities = 18/56 (32%), Positives = 36/56 (64%)
 Frame = +3

Query: 78  KMDATALQHENQKLVQQLEAQKSEMHVLEAKFKELRNEQSSYDNTLISLDKTWNQL 245
           +MD+  LQ +N+KL ++LE +++    L  + ++L   Q++ D TL+ +++ W QL
Sbjct: 46  EMDSKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIVNRYWAQL 101

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>BRE1B_RAT (Q8CJB9) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING|
           finger protein 40) (Syntaxin-1-interacting RING finger
           protein) (Protein staring)
          Length = 1002

 Score = 39.3 bits (90), Expect = 0.002
 Identities = 18/56 (32%), Positives = 36/56 (64%)
 Frame = +3

Query: 78  KMDATALQHENQKLVQQLEAQKSEMHVLEAKFKELRNEQSSYDNTLISLDKTWNQL 245
           +MD+  LQ +N+KL ++LE +++    L  + ++L   Q++ D TL+ +++ W QL
Sbjct: 46  EMDSKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIVNRYWAQL 101

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>BRE1B_PONPY (Q5RAU7) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING|
           finger protein 40)
          Length = 1001

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 18/56 (32%), Positives = 35/56 (62%)
 Frame = +3

Query: 78  KMDATALQHENQKLVQQLEAQKSEMHVLEAKFKELRNEQSSYDNTLISLDKTWNQL 245
           +MD   LQ +N+KL ++LE +++    L  + ++L   Q++ D TL+ +++ W QL
Sbjct: 46  EMDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIVNRYWAQL 101

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>BRE1B_HUMAN (O75150) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING|
           finger protein 40) (95 kDa retinoblastoma-associated
           protein) (RBP95)
          Length = 1001

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 18/56 (32%), Positives = 35/56 (62%)
 Frame = +3

Query: 78  KMDATALQHENQKLVQQLEAQKSEMHVLEAKFKELRNEQSSYDNTLISLDKTWNQL 245
           +MD   LQ +N+KL ++LE +++    L  + ++L   Q++ D TL+ +++ W QL
Sbjct: 46  EMDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIVNRYWAQL 101

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>RAD50_SULSO (Q97WH0) DNA double-strand break repair rad50 ATPase|
          Length = 864

 Score = 32.3 bits (72), Expect = 0.28
 Identities = 15/54 (27%), Positives = 34/54 (62%)
 Frame = +3

Query: 96  LQHENQKLVQQLEAQKSEMHVLEAKFKELRNEQSSYDNTLISLDKTWNQLVDDL 257
           L+    +L ++L+   +E++ +E +++ L N ++SYDN +  L K  N+ +++L
Sbjct: 452 LELNKNELEEELKKITNELNKIEREYRRLSNNKASYDNVMRQLKKL-NEEIENL 504

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>TOPI_DROME (Q9VH70) Testis-specific zinc finger protein topi (Protein|
           matotopetli)
          Length = 814

 Score = 32.0 bits (71), Expect = 0.37
 Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
 Frame = -2

Query: 270 LQAGLNHQQADSTSYPGKSECCRKKIVHSSTP*T*LPTHAF-----QTSALPIAAPASGF 106
           L  G+   + ++   P +   C +K VH+S     +  HA      QTS  P   PA+G 
Sbjct: 212 LATGIESSRKNAAKGPNECTMCDRKFVHASGLVRHMEKHALDLIPSQTSEQPHTIPAAGL 271

Query: 105 HV 100
           HV
Sbjct: 272 HV 273

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>FANCB_HUMAN (Q8NB91) Fanconi anemia group B protein (Protein FACB) (Fanconi|
           anemia-associated polypeptide of 95 kDa) (FAAP95)
          Length = 859

 Score = 31.6 bits (70), Expect = 0.48
 Identities = 15/66 (22%), Positives = 37/66 (56%)
 Frame = +3

Query: 78  KMDATALQHENQKLVQQLEAQKSEMHVLEAKFKELRNEQSSYDNTLISLDKTWNQLVDDL 257
           K D T+   E + LV     +++ +H+L+ K  +      ++ ++   ++K W +++DD 
Sbjct: 433 KDDNTSSAEEKECLVPLCGEEENSVHILDEKLSD------NFQDSEQLVEKIWYRVIDDS 486

Query: 258 ILLGVR 275
           +++GV+
Sbjct: 487 LVVGVK 492

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>FEN_HALSA (Q9HQ27) Flap structure-specific endonuclease (EC 3.1.-.-)|
          Length = 327

 Score = 31.6 bits (70), Expect = 0.48
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = +3

Query: 189 EQSSYDNTLISLDKTWNQLVDDLILLGVRFGGGLN 293
           E   +D TL   D TW QLVD  IL G  F  G++
Sbjct: 198 ELMDFDATLAEHDLTWEQLVDVGILCGTDFNPGID 232

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>MUKB_HAEIN (P45187) Chromosome partition protein mukB (Structural maintenance of|
            chromosome-related protein)
          Length = 1510

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
 Frame = +3

Query: 108  NQKLVQQLEAQKSEMHVLEAKFKELRNEQSSYDNTLISLDKTW-------NQLVDDLILL 266
            N+KL Q+LE  +++      + ++ +++ + Y+  LI L  ++       N+L+ ++  L
Sbjct: 1025 NEKLRQRLEQMQAQRDTQREQVRQKQSQFAEYNRVLIQLQSSYDSKYQLLNELIGEISDL 1084

Query: 267  GVRFGGG 287
            GVR   G
Sbjct: 1085 GVRADDG 1091

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>ANT1_ONCVO (P21249) Major antigen (Myosin-like antigen)|
          Length = 2022

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 16/61 (26%), Positives = 32/61 (52%)
 Frame = +3

Query: 96  LQHENQKLVQQLEAQKSEMHVLEAKFKELRNEQSSYDNTLISLDKTWNQLVDDLILLGVR 275
           L  EN++L  + +  K+ +  +E ++  +  +    DN L +L+ T  +LV++L     R
Sbjct: 556 LLEENKRLKDENDGMKNRIQDIEKEYNTIIRKLEEKDNALKNLENTRQRLVNELEEQRTR 615

Query: 276 F 278
           F
Sbjct: 616 F 616

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>LUXD1_PHOLE (P21309) Acyl transferase (EC 2.3.1.-) (ACT)|
           (Myristoyl-ACP-specific thioesterase) (C14ACP-TE)
          Length = 315

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 7/66 (10%)
 Frame = +3

Query: 84  DATALQHENQKLVQQLEAQKSEM-------HVLEAKFKELRNEQSSYDNTLISLDKTWNQ 242
           D    QHE + LV  +++ K ++       H L      LRN   S     +SLD+   +
Sbjct: 213 DDWVCQHEVKHLVSNVKSDKKKIYSLVGSSHDLGENLVVLRNFYQSMTKAAVSLDRQLVE 272

Query: 243 LVDDLI 260
           LVD++I
Sbjct: 273 LVDEII 278

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>MYSP_BOOMI (Q86RN8) Paramyosin|
          Length = 873

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 7/41 (17%)
 Frame = +3

Query: 93  ALQHENQKLVQQLEAQKSE-------MHVLEAKFKELRNEQ 194
           ALQ EN+KLV  L   KS+       +H  E + K L NE+
Sbjct: 419 ALQRENKKLVDDLSEAKSQLADAIRRLHEYELEIKRLENER 459

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>MYOJ_DICDI (P54697) Myosin IJ heavy chain|
          Length = 2245

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
 Frame = +3

Query: 75   SKMDATALQHENQ--KLVQQLEAQKSEMHVLEAKFKELRNEQSSYDNTLISLDKTWNQLV 248
            S +D+T  + EN+  KL QQLE    ++H L+   +EL + + S         K  NQL+
Sbjct: 1645 STIDSTIKEKENEISKLQQQLETSNQQLHQLK---EELNSMKQSNQLESTEQSKQLNQLI 1701

Query: 249  DD 254
             +
Sbjct: 1702 QE 1703

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>SYNE1_HUMAN (Q8NF91) Nesprin-1 (Nuclear envelope spectrin repeat protein 1)|
            (Synaptic nuclear envelope protein 1) (Syne-1) (Myocyte
            nuclear envelope protein 1) (Myne-1) (Enaptin)
          Length = 8797

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 11/40 (27%), Positives = 23/40 (57%)
 Frame = +3

Query: 138  QKSEMHVLEAKFKELRNEQSSYDNTLISLDKTWNQLVDDL 257
            + SE+H   AK++ +  +   Y+N L++L +T   ++  L
Sbjct: 4594 ESSELHTQLAKYQNILEQSPEYENLLLTLQRTGQTILPSL 4633

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>YWBM_BACSU (P39596) Hypothetical protein ywbM|
          Length = 385

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = +3

Query: 90  TALQHENQKLVQQLEAQKSEMHVLEAKFKELRNEQSSYD 206
           +AL  ++  L ++L+ + SE  VL AK+K      +SYD
Sbjct: 319 SALVKDHSDLTEKLDTEFSEFEVLMAKYKTNDQSYTSYD 357

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>TPM1_LIZAU (P84335) Tropomyosin 1 alpha chain (Alpha-tropomyosin)|
          Length = 284

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 15/55 (27%), Positives = 29/55 (52%)
 Frame = +3

Query: 93  ALQHENQKLVQQLEAQKSEMHVLEAKFKELRNEQSSYDNTLISLDKTWNQLVDDL 257
           +L+ + +K  Q+ +  + E+ VL  K KE        + ++  L+KT + L D+L
Sbjct: 206 SLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAEFAERSVAKLEKTIDDLEDEL 260

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>TPM3_MOUSE (P21107) Tropomyosin alpha-3 chain (Tropomyosin-3) (Tropomyosin|
           gamma)
          Length = 284

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 14/55 (25%), Positives = 29/55 (52%)
 Frame = +3

Query: 93  ALQHENQKLVQQLEAQKSEMHVLEAKFKELRNEQSSYDNTLISLDKTWNQLVDDL 257
           +L+ + +K  Q+ +  + E+ +L  K KE        + ++  L+KT + L D+L
Sbjct: 206 SLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDEL 260

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>TPM3_HUMAN (P06753) Tropomyosin alpha-3 chain (Tropomyosin-3) (Tropomyosin|
           gamma) (hTM5)
          Length = 284

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 14/55 (25%), Positives = 29/55 (52%)
 Frame = +3

Query: 93  ALQHENQKLVQQLEAQKSEMHVLEAKFKELRNEQSSYDNTLISLDKTWNQLVDDL 257
           +L+ + +K  Q+ +  + E+ +L  K KE        + ++  L+KT + L D+L
Sbjct: 206 SLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDEL 260

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>MAD1_YARLI (Q6C452) Spindle assembly checkpoint component MAD1 (Mitotic arrest|
           deficient protein 1)
          Length = 704

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +3

Query: 87  ATALQHENQKLVQQLEAQKSEMHVLEAKFKELRNEQ 194
           A   Q    +L + LEA K+E  VLE + KE R+EQ
Sbjct: 425 ADVKQGRIDELEKLLEAVKNEKSVLEGELKEARSEQ 460

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>GOGB1_HUMAN (Q14789) Golgin subfamily B member 1 (Giantin) (Macrogolgin) (372 kDa|
            Golgi complex-associated protein) (GCP372)
          Length = 3259

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 15/47 (31%), Positives = 29/47 (61%), Gaps = 7/47 (14%)
 Frame = +3

Query: 96   LQHENQKLVQQLE-------AQKSEMHVLEAKFKELRNEQSSYDNTL 215
            LQ EN++L+ QLE       + ++E+  LE++ K L+++ +   N+L
Sbjct: 2282 LQGENKELLSQLEETRHLYHSSQNELAKLESELKSLKDQLTDLSNSL 2328

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>CP135_MOUSE (Q6P5D4) Centrosomal protein of 135 kDa (Cep135 protein) (Centrosomal|
            protein 4)
          Length = 1140

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 15/64 (23%), Positives = 32/64 (50%)
 Frame = +3

Query: 84   DATALQHENQKLVQQLEAQKSEMHVLEAKFKELRNEQSSYDNTLISLDKTWNQLVDDLIL 263
            D   +  ENQ++  +LEA   E   ++++  +   E S +++ + + +K    L+D   +
Sbjct: 826  DLATMARENQEISLELEAAVQEKEEMKSRVHKYITEVSRWESLMAAKEKENKDLLDRFQM 885

Query: 264  LGVR 275
            L  R
Sbjct: 886  LHSR 889

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>GOGA5_CAEEL (P90970) Golgin-84|
          Length = 530

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 15/55 (27%), Positives = 30/55 (54%)
 Frame = +3

Query: 84  DATALQHENQKLVQQLEAQKSEMHVLEAKFKELRNEQSSYDNTLISLDKTWNQLV 248
           D T    E+ +L  Q+   +S+M  LEA+ ++L+++ S    T +   +TW+  +
Sbjct: 298 DLTKADLESAQL--QVYTLRSDMEELEAQIRDLQSQLSDQKRTHLEEKQTWDSTI 350

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>HMW2_MYCGE (P47460) Cytadherence high molecular weight protein 2 (Cytadherence|
            accessory protein 2)
          Length = 1805

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 16/43 (37%), Positives = 25/43 (58%)
 Frame = +3

Query: 105  ENQKLVQQLEAQKSEMHVLEAKFKELRNEQSSYDNTLISLDKT 233
            E QKL+ +LE +K++++   AKF   R E  +    L+ L KT
Sbjct: 1362 ELQKLLVELETRKTKLNNDFAKFSRQREEFENQRLKLLELQKT 1404

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>YBE7_YEAST (P34216) Protein YBL047C|
          Length = 1381

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = +3

Query: 78  KMDATALQ--HENQKLVQQLEAQKSEMHVLEAKFKELRNE 191
           +++A  LQ   EN+ L QQL   ++  H  E+K  EL  +
Sbjct: 664 QLEAQVLQVNKENETLAQQLAVSEANYHAAESKLNELTTD 703

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>DYH5_MOUSE (Q8VHE6) Ciliary dynein heavy chain 5 (Axonemal beta dynein heavy|
            chain 5) (Mdnah5)
          Length = 4621

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 16/50 (32%), Positives = 23/50 (46%)
 Frame = +3

Query: 117  LVQQLEAQKSEMHVLEAKFKELRNEQSSYDNTLISLDKTWNQLVDDLILL 266
            L ++ E +K   H+LE      R  +   DN L  L  T   LV+D  L+
Sbjct: 3730 LTEKQELEKERTHLLEDVTANKRRMKELEDNLLYRLTSTQGSLVEDESLI 3779

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>SN1L2_MOUSE (Q8CFH6) Serine/threonine-protein kinase SNF1-like kinase 2 (EC|
           2.7.11.1) (Salt-inducible kinase 2)
          Length = 931

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = -2

Query: 270 LQAGLNHQQADSTSYPGKSECCRKKIVHSSTP*T*LPTHAFQ-TSAL-PIAAPAS 112
           LQA  N  Q   +SYPG S+  +  + H  TP T     +F  T AL P+  P+S
Sbjct: 730 LQAYFNQMQIAESSYPGPSQ--QLALPHQETPLTSQQPPSFSLTQALSPVLEPSS 782

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>EEA1_HUMAN (Q15075) Early endosome antigen 1 (Endosome-associated protein|
           p162) (Zinc finger FYVE domain-containing protein 2)
          Length = 1411

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 14/50 (28%), Positives = 28/50 (56%)
 Frame = +3

Query: 111 QKLVQQLEAQKSEMHVLEAKFKELRNEQSSYDNTLISLDKTWNQLVDDLI 260
           QKL ++L   +++   L+A+FK+L+ ++   +   + L    NQL   L+
Sbjct: 375 QKLKEELSEVETKYQHLKAEFKQLQQQREEKEQHGLQLQSEINQLHSKLL 424

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>CP135_HUMAN (Q66GS9) Centrosomal protein of 135 kDa (Cep135 protein) (Centrosomal|
            protein 4)
          Length = 1140

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 14/61 (22%), Positives = 31/61 (50%)
 Frame = +3

Query: 84   DATALQHENQKLVQQLEAQKSEMHVLEAKFKELRNEQSSYDNTLISLDKTWNQLVDDLIL 263
            D   +  ENQ++  +LEA   E   ++++  +   E S +++ + + +K    L+D   +
Sbjct: 826  DLATMARENQEISLELEAAVQEKEEMKSRVHKYITEVSRWESLMAAKEKENQDLLDRFQM 885

Query: 264  L 266
            L
Sbjct: 886  L 886

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>MPEV_SYNPY (Q02178) Bilin biosynthesis protein mpeV|
          Length = 301

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
 Frame = +3

Query: 99  QHENQKLVQQLEA-QKSEMHVLEAKFKELRNEQSSYDNTLISLDKTWNQLVDDLILLGVR 275
           Q +N    QQ+    + E  VL A  KE R+     D+   S+DK    L D   LL +R
Sbjct: 6   QIKNSSQTQQVNTLSEEEALVLSAHLKEQRSSGIPLDSDQKSIDKMIAGLGDPRGLLRLR 65

Query: 276 FGGGLNNL 299
           F   L ++
Sbjct: 66  FADSLGSV 73

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>PQN25_CAEEL (P41951) Glutamine/asparagine-rich protein pqn-25|
          Length = 672

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 4/30 (13%)
 Frame = -1

Query: 193 CSF----LNSLNLASNTCISDFCASNCCTS 116
           CSF    LN+    +N C+S FC+ +C T+
Sbjct: 358 CSFSQQCLNNAVCTNNICVSTFCSVSCSTN 387

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>YNP9_CAEEL (P34562) Hypothetical GRIP and coiled-coil domain-containing|
           protein T05G5.9 in chromosome III
          Length = 660

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = +3

Query: 99  QHENQKLVQQLEAQKSEMHVLEAKFKELRNE 191
           ++EN  L  +L +   ++H LE + +ELRN+
Sbjct: 416 ENENGSLKSKLSSATKQIHSLEKELQELRND 446

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>MPP9_HUMAN (Q99550) M-phase phosphoprotein 9|
          Length = 692

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +3

Query: 96  LQHENQKLVQQLEAQKSEMHVLEAKFKELRNEQSSYDNTLISL 224
           L+ E   L ++  A  S   +L+ + +E+R      DNT+I L
Sbjct: 315 LEIEVNDLRERFSAASSASKILQERIEEMRTSSKEKDNTIIRL 357

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>ARGD1_STAAW (Q8NYM5) Acetylornithine aminotransferase 1 (EC 2.6.1.11) (ACOAT 1)|
          Length = 394

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +3

Query: 234 WNQLVDDLILLGVRFGGGLNNLPAL 308
           W Q+V D+ +LG   GGGL  + A+
Sbjct: 240 WEQVVPDIYILGKALGGGLYPVSAV 264

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>ARGD1_STAAS (Q6GCU1) Acetylornithine aminotransferase 1 (EC 2.6.1.11) (ACOAT 1)|
          Length = 394

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +3

Query: 234 WNQLVDDLILLGVRFGGGLNNLPAL 308
           W Q+V D+ +LG   GGGL  + A+
Sbjct: 240 WEQVVPDIYILGKALGGGLYPVSAV 264

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>ARGD1_STAAR (Q6GKC1) Acetylornithine aminotransferase 1 (EC 2.6.1.11) (ACOAT 1)|
          Length = 394

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +3

Query: 234 WNQLVDDLILLGVRFGGGLNNLPAL 308
           W Q+V D+ +LG   GGGL  + A+
Sbjct: 240 WEQVVPDIYILGKALGGGLYPVSAV 264

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>ARGD1_STAAN (P60296) Acetylornithine aminotransferase 1 (EC 2.6.1.11) (ACOAT 1)|
          Length = 394

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +3

Query: 234 WNQLVDDLILLGVRFGGGLNNLPAL 308
           W Q+V D+ +LG   GGGL  + A+
Sbjct: 240 WEQVVPDIYILGKALGGGLYPVSAV 264

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>ARGD1_STAAM (P60295) Acetylornithine aminotransferase 1 (EC 2.6.1.11) (ACOAT 1)|
          Length = 394

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +3

Query: 234 WNQLVDDLILLGVRFGGGLNNLPAL 308
           W Q+V D+ +LG   GGGL  + A+
Sbjct: 240 WEQVVPDIYILGKALGGGLYPVSAV 264

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>ARGD1_STAAC (Q5HJI8) Acetylornithine aminotransferase 1 (EC 2.6.1.11) (ACOAT 1)|
          Length = 394

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +3

Query: 234 WNQLVDDLILLGVRFGGGLNNLPAL 308
           W Q+V D+ +LG   GGGL  + A+
Sbjct: 240 WEQVVPDIYILGKALGGGLYPVSAV 264

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>ARHGC_HUMAN (Q9NZN5) Rho guanine nucleotide exchange factor 12|
           (Leukemia-associated RhoGEF)
          Length = 1544

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +3

Query: 171 FKELRNEQSSYDNTLISLDKTWNQLVDDLILLGVR 275
           F E ++E   ++N L +    W QLV   +LLG++
Sbjct: 748 FGESQSEDEQFENDLETDPPNWQQLVSREVLLGLK 782

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>Y835_RICCN (Q92HD6) Hypothetical UPF0192 protein RC0835 precursor|
          Length = 1892

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 16/56 (28%), Positives = 26/56 (46%)
 Frame = +3

Query: 87   ATALQHENQKLVQQLEAQKSEMHVLEAKFKELRNEQSSYDNTLISLDKTWNQLVDD 254
            A  L +  Q+LVQ L+  +  M    +K  +  +E+ +YD       + WN   DD
Sbjct: 1451 ANILLYNEQELVQILKTDRKNMDESLSKIFQTLSERQNYDGGF----RYWNNFNDD 1502

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>ARHGC_MOUSE (Q8R4H2) Rho guanine nucleotide exchange factor 12|
           (Leukemia-associated RhoGEF)
          Length = 1543

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +3

Query: 171 FKELRNEQSSYDNTLISLDKTWNQLVDDLILLGVR 275
           F E ++E   ++N L +    W QLV   +LLG++
Sbjct: 748 FGESQSEDEQFENDLETDPPNWQQLVSREVLLGLK 782

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>RL10_THETN (Q8R7U4) 50S ribosomal protein L10|
          Length = 177

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +3

Query: 156 VLEAKFKELRNEQSSYDNTLISLDKTWNQLVDDLI 260
           VL  KFKE  +E   Y NTL+++        DDLI
Sbjct: 40  VLRRKFKEANSEYKVYKNTLMTIAARELGYGDDLI 74


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,556,367
Number of Sequences: 219361
Number of extensions: 693490
Number of successful extensions: 2205
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 2066
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2203
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 1386249648
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result