ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl01g10 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DQ011286.1| Zea mays Mu killer (Muk) insertion site, genomic sequence Length = 13941 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 270 tcctcctcgtggcttaccccgccctcgccgctctggctcttcgacgaccgcca 322 |||| ||| ||||| ||||| | ||||||||||||||||||||| |||||||| Sbjct: 9471 tccttctcctggctcaccccacactcgccgctctggctcttcgaggaccgcca 9419 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 189 tggcccttcgactcgctcaccacgtccctcttcttctcc 227 |||||||| |||||||||||||||||||| |||||||| Sbjct: 9540 tggccctttgactcgctcaccacgtccctgctcttctcc 9502
>dbj|AK067319.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106K21, full insert sequence Length = 3334 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 267 gcctcctcctcgtggcttaccccgccctcgccgctctggctcttcgacgaccgccag 323 ||||| || |||||||| || |||||||||||||| ||||| |||||||| |||||| Sbjct: 407 gcctcgtcgtcgtggctcacgccgccctcgccgctgtggctgttcgacgagcgccag 463 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Plus Query: 187 tgtggcccttcgactcgctcaccacgtc 214 ||||||| |||||||||||||||||||| Sbjct: 336 tgtggccgttcgactcgctcaccacgtc 363 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 48 cgtcgccgcctcctcacccgccgccgccgccgacgca 84 ||||||| ||||||| ||||||||||||||| |||| Sbjct: 129 cgtcgcctcctcctccaccgccgccgccgccgccgca 165
>ref|NM_188676.1| Oryza sativa (japonica cultivar-group), Ozsa8279 predicted mRNA Length = 951 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 276 tcgtggcttaccccgccctcgccgctctggctcttcgacgaccgccag 323 |||||||| || |||||||||||||| ||||| |||||||| |||||| Sbjct: 209 tcgtggctcacgccgccctcgccgctgtggctgttcgacgagcgccag 162 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 48 cgtcgccgcctcctcacccgccgccgccgccgacgca 84 ||||||| ||||||| ||||||||||||||| |||| Sbjct: 331 cgtcgcctcctcctccaccgccgccgccgccgccgca 295
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 276 tcgtggcttaccccgccctcgccgctctggctcttcgacgaccgccag 323 |||||||| || |||||||||||||| ||||| |||||||| |||||| Sbjct: 7570652 tcgtggctcacgccgccctcgccgctgtggctgttcgacgagcgccag 7570699 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 56 cctcctcacccgccgccgccgccg 79 |||||||||||||||||||||||| Sbjct: 21888857 cctcctcacccgccgccgccgccg 21888880 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Plus Query: 187 tgtggcccttcgactcgctcaccacgtc 214 ||||||| |||||||||||||||||||| Sbjct: 7570569 tgtggccgttcgactcgctcaccacgtc 7570596 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Minus Query: 375 gccgccgacgccgccgccgtcgc 397 ||||||||||||||||||||||| Sbjct: 40502660 gccgccgacgccgccgccgtcgc 40502638 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Minus Query: 53 ccgcctcctcacccgccgccgccgccg 79 |||||||||| |||||||||||||||| Sbjct: 39766380 ccgcctcctcccccgccgccgccgccg 39766354 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 58 tcctcacccgccgccgccgccg 79 |||||||||||||||||||||| Sbjct: 39680435 tcctcacccgccgccgccgccg 39680414 Score = 44.1 bits (22), Expect = 0.39 Identities = 33/36 (91%), Gaps = 3/36 (8%) Strand = Plus / Minus Query: 47 ccgtcgccgcctcc---tcacccgccgccgccgccg 79 |||||||||||||| ||||||||||||||||||| Sbjct: 18646199 ccgtcgccgcctccgcgtcacccgccgccgccgccg 18646164 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 224 ctcctccgtctcctcctccccgccgc 249 ||||||| |||||||||||||||||| Sbjct: 4448476 ctcctccttctcctcctccccgccgc 4448501 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 373 ctgccgccgacgccgccgccg 393 ||||||||||||||||||||| Sbjct: 40251809 ctgccgccgacgccgccgccg 40251829 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 56 cctcctcacccgccgccgccgccga 80 ||||||| ||||||||||||||||| Sbjct: 21106033 cctcctcccccgccgccgccgccga 21106009 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 375 gccgccgacgccgccgccgtcgcgg 399 ||||||| ||||||||||||||||| Sbjct: 11687149 gccgccggcgccgccgccgtcgcgg 11687173 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 50 tcgccgcctcctcacccgccgccgccgcc 78 |||||||||| || ||||||||||||||| Sbjct: 10301831 tcgccgcctcatcccccgccgccgccgcc 10301803 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 48 cgtcgccgcctcctcacccgccgccgccgccgacgca 84 ||||||| ||||||| ||||||||||||||| |||| Sbjct: 7570362 cgtcgcctcctcctccaccgccgccgccgccgccgca 7570398 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 62 cacccgccgccgccgccgacgcacc 86 |||||||||||| |||||||||||| Sbjct: 5508119 cacccgccgccggcgccgacgcacc 5508095 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 62 cacccgccgccgccgccgacg 82 ||||||||||||||||||||| Sbjct: 1833282 cacccgccgccgccgccgacg 1833262 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 375 gccgccgacgccgccgccgtcgcgg 399 ||||||| ||||||||||||||||| Sbjct: 637929 gccgccgccgccgccgccgtcgcgg 637905 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 374 tgccgccgacgccgccgccgtcgc 397 |||||||| ||||||||||||||| Sbjct: 39453243 tgccgccgccgccgccgccgtcgc 39453220 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 tcctcacccgccgccgccgc 77 |||||||||||||||||||| Sbjct: 27271749 tcctcacccgccgccgccgc 27271730 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 cctcctcacccgccgccgccgccg 79 ||||||| |||||||||||||||| Sbjct: 27035185 cctcctcccccgccgccgccgccg 27035208 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 acccgccgccgccgccgacg 82 |||||||||||||||||||| Sbjct: 11165419 acccgccgccgccgccgacg 11165400 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 56 cctcctcacccgccgccgccgccgacgc 83 ||||||| ||||||||||||||||||| Sbjct: 9116062 cctcctcctccgccgccgccgccgacgc 9116035 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 65 ccgccgccgccgccgacgcaccgc 88 ||||||||||||||| |||||||| Sbjct: 8716052 ccgccgccgccgccgccgcaccgc 8716075 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 cccgccgccgccgccgacgcaccg 87 |||||||||||||||| ||||||| Sbjct: 6318545 cccgccgccgccgccgccgcaccg 6318522 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 ctcctccccgccgctccacc 255 |||||||||||||||||||| Sbjct: 6270290 ctcctccccgccgctccacc 6270271 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 cctcctcacccgccgccgccgccg 79 ||||||| |||||||||||||||| Sbjct: 4243318 cctcctcccccgccgccgccgccg 4243341
>dbj|AP001539.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0708G02 Length = 168976 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 276 tcgtggcttaccccgccctcgccgctctggctcttcgacgaccgccag 323 |||||||| || |||||||||||||| ||||| |||||||| |||||| Sbjct: 119444 tcgtggctcacgccgccctcgccgctgtggctgttcgacgagcgccag 119491 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Plus Query: 187 tgtggcccttcgactcgctcaccacgtc 214 ||||||| |||||||||||||||||||| Sbjct: 119361 tgtggccgttcgactcgctcaccacgtc 119388 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 48 cgtcgccgcctcctcacccgccgccgccgccgacgca 84 ||||||| ||||||| ||||||||||||||| |||| Sbjct: 119154 cgtcgcctcctcctccaccgccgccgccgccgccgca 119190
>gb|AC110160.10| Mus musculus chromosome 1, clone RP23-66A20, complete sequence Length = 179096 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 213 tccctcttcttctcctccgtctcctcctcc 242 |||||||||||||||||| ||||||||||| Sbjct: 79341 tccctcttcttctcctccttctcctcctcc 79370
>gb|AC166831.3| Mus musculus BAC clone RP23-270P14 from chromosome 16, complete sequence Length = 230269 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 216 ctcttcttctcctccgtctcctcctcccc 244 ||||||||||||||| ||||||||||||| Sbjct: 176999 ctcttcttctcctccttctcctcctcccc 176971
>gb|AC129776.3| Mus musculus BAC clone RP23-197A15 from chromosome 16, complete sequence Length = 219345 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 216 ctcttcttctcctccgtctcctcctcccc 244 ||||||||||||||| ||||||||||||| Sbjct: 132868 ctcttcttctcctccttctcctcctcccc 132840
>ref|XM_479581.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1803 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 56 cctcctcacccgccgccgccgccg 79 |||||||||||||||||||||||| Sbjct: 86 cctcctcacccgccgccgccgccg 109
>ref|XM_506580.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0060O17.31 mRNA Length = 1849 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 56 cctcctcacccgccgccgccgccg 79 |||||||||||||||||||||||| Sbjct: 95 cctcctcacccgccgccgccgccg 118
>gb|AC137618.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0090H02, complete sequence Length = 135231 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 56 cctcctcacccgccgccgccgccg 79 |||||||||||||||||||||||| Sbjct: 106405 cctcctcacccgccgccgccgccg 106428
>gb|AC104279.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1393_A07, complete sequence Length = 159932 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 56 cctcctcacccgccgccgccgccg 79 |||||||||||||||||||||||| Sbjct: 8860 cctcctcacccgccgccgccgccg 8883
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Plus Query: 52 gccgcctcctcacccgccgccgccgccg 79 ||||||||| |||||||||||||||||| Sbjct: 9812136 gccgcctccgcacccgccgccgccgccg 9812163 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Minus Query: 375 gccgccgacgccgccgccgtcgc 397 ||||||||||||||||||||||| Sbjct: 10521166 gccgccgacgccgccgccgtcgc 10521144 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 287 cccgccctcgccgctctggctc 308 |||||||||||||||||||||| Sbjct: 14621318 cccgccctcgccgctctggctc 14621297 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 57 ctcctcacccgccgccgccgccgacgcacc 86 |||||| |||||||||||||||| |||||| Sbjct: 714557 ctcctctcccgccgccgccgccgccgcacc 714586 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 62 cacccgccgccgccgccgacg 82 ||||||||||||||||||||| Sbjct: 35669289 cacccgccgccgccgccgacg 35669269 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 cctcacccgccgccgccgccg 79 ||||||||||||||||||||| Sbjct: 30313935 cctcacccgccgccgccgccg 30313955 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 65 ccgccgccgccgccgacgcaccgca 89 ||||||||||||||| ||||||||| Sbjct: 14733343 ccgccgccgccgccgccgcaccgca 14733319 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 63 acccgccgccgccgccgacgc 83 ||||||||||||||||||||| Sbjct: 13199870 acccgccgccgccgccgacgc 13199850 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 373 ctgccgccgacgccgccgccgtcgcggaggagg 405 ||||||||| ||||||||||| | ||||||||| Sbjct: 12920723 ctgccgccgccgccgccgccgccacggaggagg 12920755 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 374 tgccgccgacgccgccgccg 393 |||||||||||||||||||| Sbjct: 31199950 tgccgccgacgccgccgccg 31199931 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 375 gccgccgacgccgccgccgtcgcggagg 402 ||||||| ||||||||||||||| |||| Sbjct: 29192779 gccgccgccgccgccgccgtcgccgagg 29192752 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 cccgccgccgccgccgacgc 83 |||||||||||||||||||| Sbjct: 29174485 cccgccgccgccgccgacgc 29174466 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 tgcctcccctcctcctctcc 41 |||||||||||||||||||| Sbjct: 26416413 tgcctcccctcctcctctcc 26416432 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 373 ctgccgccgacgccgccgccgtcg 396 ||||||||| |||||||||||||| Sbjct: 22476849 ctgccgccgccgccgccgccgtcg 22476826 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 ctcctcacccgccgccgccg 76 |||||||||||||||||||| Sbjct: 9136404 ctcctcacccgccgccgccg 9136385 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 223 tctcctccgtctcctcctccccgccgctccac 254 |||||| | |||||||||||||||||| |||| Sbjct: 7749351 tctccttcctctcctcctccccgccgcaccac 7749320 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 373 ctgccgccgacgccgccgccgtcg 396 ||||||||| |||||||||||||| Sbjct: 4204676 ctgccgccgccgccgccgccgtcg 4204653 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 cctcctcacccgccgccgccgccg 79 ||||||| |||||||||||||||| Sbjct: 3548553 cctcctcccccgccgccgccgccg 3548530 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 52 gccgcctcctcacccgccgccgccgccg 79 |||||| | ||||||||||||||||||| Sbjct: 3152262 gccgccgcatcacccgccgccgccgccg 3152289 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 cctcctcacccgccgccgccgccg 79 ||||||| |||||||||||||||| Sbjct: 3092623 cctcctcccccgccgccgccgccg 3092646
>emb|AL691470.17| Mouse DNA sequence from clone RP23-160F12 on chromosome 11 Contains the 3' end of gene FLJ13305, a novel gene, a novel gene (1700061J23Rik) and a CpG island, complete sequence Length = 195614 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Minus Query: 215 cctcttcttctcctccgtctcctcctcc 242 |||||||||||||||| ||||||||||| Sbjct: 188348 cctcttcttctcctccttctcctcctcc 188321
>emb|AL928552.7| Mouse DNA sequence from clone RP23-30I12 on chromosome 4, complete sequence Length = 206507 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Plus Query: 215 cctcttcttctcctccgtctcctcctcc 242 |||||||||||||||| ||||||||||| Sbjct: 25922 cctcttcttctcctccttctcctcctcc 25949
>gb|AC158524.2| Mus musculus BAC clone RP23-377I1 from chromosome 13, complete sequence Length = 191904 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Plus Query: 215 cctcttcttctcctccgtctcctcctcc 242 |||||||||||||||| ||||||||||| Sbjct: 171046 cctcttcttctcctccttctcctcctcc 171073
>gb|AY224430.1| Oryza sativa (japonica cultivar-group) isolate 20587 AOBP-like protein mRNA, complete cds Length = 1431 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 56 cctcctcacccgccgccgccgccg 79 |||||||||||||||||||||||| Sbjct: 25 cctcctcacccgccgccgccgccg 48
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Plus Query: 52 gccgcctcctcacccgccgccgccgccg 79 ||||||||| |||||||||||||||||| Sbjct: 26893173 gccgcctccccacccgccgccgccgccg 26893200 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 375 gccgccgacgccgccgccgtcgcgga 400 ||||||||||||||||||| |||||| Sbjct: 21386312 gccgccgacgccgccgccgccgcgga 21386287 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 376 ccgccgacgccgccgccgtcgcggaggagg 405 |||||| |||||||||||| |||||||||| Sbjct: 18285577 ccgccgccgccgccgccgtggcggaggagg 18285606 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 54 cgcctcctcacccgccgccgccgccg 79 ||||||||| |||||||||||||||| Sbjct: 6212423 cgcctcctctcccgccgccgccgccg 6212448 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 373 ctgccgccgacgccgccgccgtcgc 397 |||||| |||||||||||||||||| Sbjct: 25838204 ctgccggcgacgccgccgccgtcgc 25838228 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 375 gccgccgacgccgccgccgtc 395 ||||||||||||||||||||| Sbjct: 25319212 gccgccgacgccgccgccgtc 25319192 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 375 gccgccgacgccgccgccgtcgcgg 399 ||||||| ||||||||||||||||| Sbjct: 23991921 gccgccgccgccgccgccgtcgcgg 23991945 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 51 cgccgcctcctcacccgccgccgcc 75 |||||||||| |||||||||||||| Sbjct: 23944918 cgccgcctccccacccgccgccgcc 23944942 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 375 gccgccgacgccgccgccgtcgcggagga 403 ||||||| ||||||||||| ||||||||| Sbjct: 21007661 gccgccgccgccgccgccgccgcggagga 21007689 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 cctcacccgccgccgccgccg 79 ||||||||||||||||||||| Sbjct: 16535412 cctcacccgccgccgccgccg 16535392 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 56 cctcctcacccgccgccgccgccgacgca 84 ||||||| |||||||||||||||||||| Sbjct: 3169568 cctcctccgccgccgccgccgccgacgca 3169596 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 377 cgccgacgccgccgccgtcgcggaggag 404 ||||| |||||||| ||||||||||||| Sbjct: 27314081 cgccgtcgccgccgtcgtcgcggaggag 27314108 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 gccgacgccgccgccgtcgc 397 |||||||||||||||||||| Sbjct: 25321641 gccgacgccgccgccgtcgc 25321622 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 52 gccgcctcctcacccgccgccgccgccg 79 |||||||||||| || |||||||||||| Sbjct: 22369457 gccgcctcctcatcccccgccgccgccg 22369484 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 54 cgcctcctcacccgccgccgccgc 77 |||||||||| ||||||||||||| Sbjct: 8200809 cgcctcctcagccgccgccgccgc 8200786 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 ctgccgccgacgccgccgcc 392 |||||||||||||||||||| Sbjct: 3588743 ctgccgccgacgccgccgcc 3588762 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 65 ccgccgccgccgccgacgcaccgc 88 ||||||||||||||| |||||||| Sbjct: 3130568 ccgccgccgccgccgccgcaccgc 3130591
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 56 cctcctcacccgccgccgccgccg 79 |||||||||||||||||||||||| Sbjct: 29027506 cctcctcacccgccgccgccgccg 29027483 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Plus Query: 65 ccgccgccgccgccgacgcaccg 87 ||||||||||||||||||||||| Sbjct: 23341421 ccgccgccgccgccgacgcaccg 23341443 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 377 cgccgacgccgccgccgtcgcggagg 402 ||||||||||||||||||||| |||| Sbjct: 24501866 cgccgacgccgccgccgtcgccgagg 24501891 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 224 ctcctccgtctcctcctccccgccgctcc 252 ||||||| |||||||||||||||||||| Sbjct: 16164197 ctcctcctcctcctcctccccgccgctcc 16164225 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 51 cgccgcctcctcacccgccgccgccgccg 79 ||||||||| || |||||||||||||||| Sbjct: 8417937 cgccgcctcatcccccgccgccgccgccg 8417965 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 373 ctgccgccgacgccgccgccgtcg 396 ||||||||| |||||||||||||| Sbjct: 29234663 ctgccgccgccgccgccgccgtcg 29234686 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 tctcctccgtctcctcctcc 242 |||||||||||||||||||| Sbjct: 27830013 tctcctccgtctcctcctcc 27830032 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 229 ccgtctcctcctccccgccgctcc 252 ||||||||||||| |||||||||| Sbjct: 16219886 ccgtctcctcctcgccgccgctcc 16219863 Score = 40.1 bits (20), Expect = 6.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 48 cgtcgccgcctcctcacccgccgccgccgccgacgc 83 |||||||||| || | ||||||||||||||||||| Sbjct: 5134742 cgtcgccgccgccgccgccgccgccgccgccgacgc 5134707 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 373 ctgccgccgacgccgccgccgtcg 396 ||||||||| |||||||||||||| Sbjct: 3260887 ctgccgccgccgccgccgccgtcg 3260864 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 gcccgtcgcctcctcctcgt 279 |||||||||||||||||||| Sbjct: 1512581 gcccgtcgcctcctcctcgt 1512600 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 ccgccgccgccgccgacgca 84 |||||||||||||||||||| Sbjct: 1193984 ccgccgccgccgccgacgca 1193965
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 56 cctcctcacccgccgccgccgccg 79 |||||||||||||||||||||||| Sbjct: 17479055 cctcctcacccgccgccgccgccg 17479078 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 cgccgacgccgccgccgtcgc 397 ||||||||||||||||||||| Sbjct: 28051737 cgccgacgccgccgccgtcgc 28051717 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 373 ctgccgccgacgccgccgccgtcgc 397 ||||||||| ||||||||||||||| Sbjct: 26897099 ctgccgccgccgccgccgccgtcgc 26897123 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 cctcctcacccgccgccgccgccg 79 ||||||| |||||||||||||||| Sbjct: 24629600 cctcctcccccgccgccgccgccg 24629577 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 tcttcttctcctccgtctcc 236 |||||||||||||||||||| Sbjct: 23168218 tcttcttctcctccgtctcc 23168199 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 375 gccgccgacgccgccgccgtcgcg 398 ||||||| |||||||||||||||| Sbjct: 20934726 gccgccgccgccgccgccgtcgcg 20934749 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 52 gccgcctcctcacccgccgccgccgccg 79 |||||||||||| |||| |||||||||| Sbjct: 20146179 gccgcctcctcatccgctgccgccgccg 20146152 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 cttctcctccgtctcctcct 240 |||||||||||||||||||| Sbjct: 19363660 cttctcctccgtctcctcct 19363679 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 cgccgacgccgccgccgtcg 396 |||||||||||||||||||| Sbjct: 18090971 cgccgacgccgccgccgtcg 18090952 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 ctcacccgccgccgccgccg 79 |||||||||||||||||||| Sbjct: 17224054 ctcacccgccgccgccgccg 17224073 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 48 cgtcgccgcctcctcacccgccgccgccgccg 79 ||||||||||||||| || |||||||||||| Sbjct: 16106237 cgtcgccgcctcctcctcctccgccgccgccg 16106268 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 ccgccgccgccgccgacgcaccgc 88 ||||||||||||||| |||||||| Sbjct: 14803638 ccgccgccgccgccgccgcaccgc 14803615 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 cctcccctcctcctctcccc 43 |||||||||||||||||||| Sbjct: 10442973 cctcccctcctcctctcccc 10442992 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 cctcctcacccgccgccgccgccg 79 ||||||| |||||||||||||||| Sbjct: 4810419 cctcctctcccgccgccgccgccg 4810396 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 380 cgacgccgccgccgtcgcggagga 403 |||||||||||||||| ||||||| Sbjct: 4734002 cgacgccgccgccgtctcggagga 4733979 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 29 cctcctcctctccccgtcccgtcgccgcctcc 60 ||||||||||||||| |||| |||||||||| Sbjct: 4141054 cctcctcctctccccctccccccgccgcctcc 4141085 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 cctcctcacccgccgccgccgccg 79 ||||||| |||||||||||||||| Sbjct: 2678025 cctcctcccccgccgccgccgccg 2678002 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 ctcctcctccccgccgctcc 252 |||||||||||||||||||| Sbjct: 1638385 ctcctcctccccgccgctcc 1638366 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 56 cctcctcacccgccgccgccgccgacgc 83 ||||||| ||||||||||||||||||| Sbjct: 1140590 cctcctccgccgccgccgccgccgacgc 1140563
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Plus Query: 52 gccgcctcctcacccgccgccgccgccg 79 ||||||||| |||||||||||||||||| Sbjct: 9810257 gccgcctccgcacccgccgccgccgccg 9810284 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Minus Query: 375 gccgccgacgccgccgccgtcgc 397 ||||||||||||||||||||||| Sbjct: 10519267 gccgccgacgccgccgccgtcgc 10519245 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 287 cccgccctcgccgctctggctc 308 |||||||||||||||||||||| Sbjct: 14616293 cccgccctcgccgctctggctc 14616272 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 57 ctcctcacccgccgccgccgccgacgcacc 86 |||||| |||||||||||||||| |||||| Sbjct: 714555 ctcctctcccgccgccgccgccgccgcacc 714584 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 62 cacccgccgccgccgccgacg 82 ||||||||||||||||||||| Sbjct: 35759362 cacccgccgccgccgccgacg 35759342 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 cctcacccgccgccgccgccg 79 ||||||||||||||||||||| Sbjct: 30405357 cctcacccgccgccgccgccg 30405377 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 65 ccgccgccgccgccgacgcaccgca 89 ||||||||||||||| ||||||||| Sbjct: 14727877 ccgccgccgccgccgccgcaccgca 14727853 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 63 acccgccgccgccgccgacgc 83 ||||||||||||||||||||| Sbjct: 13196645 acccgccgccgccgccgacgc 13196625 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 373 ctgccgccgacgccgccgccgtcgcggaggagg 405 ||||||||| ||||||||||| | ||||||||| Sbjct: 12917486 ctgccgccgccgccgccgccgccacggaggagg 12917518 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 374 tgccgccgacgccgccgccg 393 |||||||||||||||||||| Sbjct: 31290473 tgccgccgacgccgccgccg 31290454 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 375 gccgccgacgccgccgccgtcgcggagg 402 ||||||| ||||||||||||||| |||| Sbjct: 29284201 gccgccgccgccgccgccgtcgccgagg 29284174 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 cccgccgccgccgccgacgc 83 |||||||||||||||||||| Sbjct: 29265907 cccgccgccgccgccgacgc 29265888 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 tgcctcccctcctcctctcc 41 |||||||||||||||||||| Sbjct: 26507722 tgcctcccctcctcctctcc 26507741 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 373 ctgccgccgacgccgccgccgtcg 396 ||||||||| |||||||||||||| Sbjct: 22469878 ctgccgccgccgccgccgccgtcg 22469855 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 ctcctcacccgccgccgccg 76 |||||||||||||||||||| Sbjct: 9134237 ctcctcacccgccgccgccg 9134218 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 223 tctcctccgtctcctcctccccgccgctccac 254 |||||| | |||||||||||||||||| |||| Sbjct: 7747186 tctccttcctctcctcctccccgccgcaccac 7747155 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 373 ctgccgccgacgccgccgccgtcg 396 ||||||||| |||||||||||||| Sbjct: 4204785 ctgccgccgccgccgccgccgtcg 4204762 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 cctcctcacccgccgccgccgccg 79 ||||||| |||||||||||||||| Sbjct: 3548664 cctcctcccccgccgccgccgccg 3548641 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 52 gccgcctcctcacccgccgccgccgccg 79 |||||| | ||||||||||||||||||| Sbjct: 3152373 gccgccgcatcacccgccgccgccgccg 3152400 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 cctcctcacccgccgccgccgccg 79 ||||||| |||||||||||||||| Sbjct: 3092734 cctcctcccccgccgccgccgccg 3092757
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Plus Query: 52 gccgcctcctcacccgccgccgccgccgacgc 83 ||||||||| ||||||||||||||||||||| Sbjct: 27101553 gccgcctccggacccgccgccgccgccgacgc 27101584 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Plus Query: 65 ccgccgccgccgccgacgcaccg 87 ||||||||||||||||||||||| Sbjct: 33584136 ccgccgccgccgccgacgcaccg 33584158 Score = 46.1 bits (23), Expect = 0.099 Identities = 30/31 (96%), Gaps = 1/31 (3%) Strand = Plus / Plus Query: 56 cctcctcacccgccgccgccgccgacgcacc 86 |||||||||| |||||||||||||||||||| Sbjct: 16483811 cctcctcacc-gccgccgccgccgacgcacc 16483840 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 58 tcctcacccgccgccgccgccg 79 |||||||||||||||||||||| Sbjct: 1978504 tcctcacccgccgccgccgccg 1978525 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 375 gccgccgacgccgccgccgtcgcgg 399 ||||||||||||||||||| ||||| Sbjct: 35027757 gccgccgacgccgccgccgccgcgg 35027781 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 375 gccgccgacgccgccgccgtcgcgg 399 |||||||||||||||||||| |||| Sbjct: 28839454 gccgccgacgccgccgccgttgcgg 28839478 Score = 42.1 bits (21), Expect = 1.5 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 48 cgtcgccgcctcct-cacccgccgccgccgccg 79 |||||||||| ||| |||||||||||||||||| Sbjct: 17556840 cgtcgccgccacctgcacccgccgccgccgccg 17556872 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 51 cgccgcctcctcacccgccgccgccgccg 79 |||||||||||| ||||||||||||||| Sbjct: 5121445 cgccgcctcctccgccgccgccgccgccg 5121417 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 375 gccgccgacgccgccgccgtcgcgg 399 ||||||| ||||||||||||||||| Sbjct: 1382259 gccgccgccgccgccgccgtcgcgg 1382235 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 cccgccgccgccgccgacgc 83 |||||||||||||||||||| Sbjct: 35535359 cccgccgccgccgccgacgc 35535340 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 52 gccgcctcctcacccgccgccgccgccg 79 ||||| ||||||||||| |||||||||| Sbjct: 35252267 gccgcttcctcacccgctgccgccgccg 35252240 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 cctcctcacccgccgccgccgccg 79 ||||||| |||||||||||||||| Sbjct: 30029593 cctcctctcccgccgccgccgccg 30029616 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 cgccgacgccgccgccgtcg 396 |||||||||||||||||||| Sbjct: 23703521 cgccgacgccgccgccgtcg 23703502 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 50 tcgccgcctcctcacccgccgccgccgc 77 ||||||||||||| ||| |||||||||| Sbjct: 20915707 tcgccgcctcctcgccccccgccgccgc 20915734 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 375 gccgccgacgccgccgccgtcgcg 398 ||||||| |||||||||||||||| Sbjct: 5909545 gccgccgccgccgccgccgtcgcg 5909568 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 cgacgccgccgccgtcgcgg 399 |||||||||||||||||||| Sbjct: 152899 cgacgccgccgccgtcgcgg 152918
>dbj|AP003334.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1114B07 Length = 148060 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 56 cctcctcacccgccgccgccgccg 79 |||||||||||||||||||||||| Sbjct: 118150 cctcctcacccgccgccgccgccg 118173
>gb|AC134232.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0013D02, complete sequence Length = 131883 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Minus Query: 52 gccgcctcctcacccgccgccgccgccg 79 ||||||||| |||||||||||||||||| Sbjct: 62361 gccgcctccgcacccgccgccgccgccg 62334
>dbj|AP005167.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0060O17 Length = 180015 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 56 cctcctcacccgccgccgccgccg 79 |||||||||||||||||||||||| Sbjct: 145043 cctcctcacccgccgccgccgccg 145020
>gb|AC107822.18| Mus musculus chromosome 7, clone RP23-182C11, complete sequence Length = 220443 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Minus Query: 215 cctcttcttctcctccgtctcctcctcc 242 |||||||||||||||| ||||||||||| Sbjct: 189163 cctcttcttctcctccttctcctcctcc 189136
>dbj|AP004139.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1486_E07 Length = 110494 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Plus Query: 52 gccgcctcctcacccgccgccgccgccgacgc 83 ||||||||| ||||||||||||||||||||| Sbjct: 73202 gccgcctccggacccgccgccgccgccgacgc 73233
>dbj|AK119836.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-178-B03, full insert sequence Length = 2495 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Plus Query: 52 gccgcctcctcacccgccgccgccgccg 79 ||||||||| |||||||||||||||||| Sbjct: 38 gccgcctccccacccgccgccgccgccg 65
>dbj|AP004464.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0665C04 Length = 177054 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Plus Query: 52 gccgcctcctcacccgccgccgccgccg 79 ||||||||| |||||||||||||||||| Sbjct: 155963 gccgcctccccacccgccgccgccgccg 155990
>dbj|AK119625.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-H10, full insert sequence Length = 1767 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 56 cctcctcacccgccgccgccgccg 79 |||||||||||||||||||||||| Sbjct: 94 cctcctcacccgccgccgccgccg 117
>dbj|AK107765.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-133-B01, full insert sequence Length = 1058 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 56 cctcctcacccgccgccgccgccg 79 |||||||||||||||||||||||| Sbjct: 193 cctcctcacccgccgccgccgccg 170
>dbj|AK104095.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-E07, full insert sequence Length = 1803 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 56 cctcctcacccgccgccgccgccg 79 |||||||||||||||||||||||| Sbjct: 86 cctcctcacccgccgccgccgccg 109
>dbj|AK065816.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013041J16, full insert sequence Length = 1847 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 56 cctcctcacccgccgccgccgccg 79 |||||||||||||||||||||||| Sbjct: 94 cctcctcacccgccgccgccgccg 117
>gb|AC166821.2| Mus musculus BAC clone RP24-68F22 from chromosome 17, complete sequence Length = 202649 Score = 46.1 bits (23), Expect = 0.099 Identities = 32/35 (91%) Strand = Plus / Minus Query: 45 tcccgtcgccgcctcctcacccgccgccgccgccg 79 ||||| |||||||||||| | |||||||||||||| Sbjct: 79306 tcccgccgccgcctcctcccgcgccgccgccgccg 79272
>ref|XM_465633.1| Oryza sativa (japonica cultivar-group), mRNA Length = 393 Score = 46.1 bits (23), Expect = 0.099 Identities = 30/31 (96%), Gaps = 1/31 (3%) Strand = Plus / Minus Query: 56 cctcctcacccgccgccgccgccgacgcacc 86 |||||||||| |||||||||||||||||||| Sbjct: 301 cctcctcacc-gccgccgccgccgacgcacc 272
>ref|NM_196919.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0006L06.13), mRNA Length = 282 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Minus Query: 375 gccgccgacgccgccgccgtcgc 397 ||||||||||||||||||||||| Sbjct: 149 gccgccgacgccgccgccgtcgc 127
>ref|NM_195943.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0023M11.12), mRNA Length = 972 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Minus Query: 224 ctcctccgtctcctcctccccgccgct 250 ||||||||||||| ||||||||||||| Sbjct: 198 ctcctccgtctccccctccccgccgct 172
>ref|NM_189901.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1638 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Minus Query: 53 ccgcctcctcacccgccgccgccgccg 79 |||||||||| |||||||||||||||| Sbjct: 31 ccgcctcctcccccgccgccgccgccg 5
>ref|XM_463664.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1329 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Minus Query: 375 gccgccgacgccgccgccgtcgc 397 ||||||||||||||||||||||| Sbjct: 786 gccgccgacgccgccgccgtcgc 764
>gb|AY023328.1| Oryza sativa microsatellite MRG5653 containing (GTG)X8, closest to marker R1158, genomic sequence Length = 224 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Minus Query: 375 gccgccgacgccgccgccgtcgc 397 ||||||||||||||||||||||| Sbjct: 95 gccgccgacgccgccgccgtcgc 73
>gb|AC116705.11| Mus musculus chromosome 5, clone RP23-26P10, complete sequence Length = 213155 Score = 46.1 bits (23), Expect = 0.099 Identities = 29/31 (93%) Strand = Plus / Plus Query: 213 tccctcttcttctcctccgtctcctcctccc 243 ||||||| |||||||||| |||||||||||| Sbjct: 159648 tccctctccttctcctccctctcctcctccc 159678 Score = 46.1 bits (23), Expect = 0.099 Identities = 29/31 (93%) Strand = Plus / Plus Query: 213 tccctcttcttctcctccgtctcctcctccc 243 ||||||| |||||||||| |||||||||||| Sbjct: 159594 tccctctccttctcctccctctcctcctccc 159624 Score = 46.1 bits (23), Expect = 0.099 Identities = 29/31 (93%) Strand = Plus / Plus Query: 213 tccctcttcttctcctccgtctcctcctccc 243 ||||||| |||||||||| |||||||||||| Sbjct: 159540 tccctctccttctcctccctctcctcctccc 159570 Score = 46.1 bits (23), Expect = 0.099 Identities = 29/31 (93%) Strand = Plus / Plus Query: 213 tccctcttcttctcctccgtctcctcctccc 243 ||||||| |||||||||| |||||||||||| Sbjct: 159486 tccctctccttctcctccctctcctcctccc 159516 Score = 46.1 bits (23), Expect = 0.099 Identities = 29/31 (93%) Strand = Plus / Plus Query: 213 tccctcttcttctcctccgtctcctcctccc 243 ||||||| |||||||||| |||||||||||| Sbjct: 159432 tccctctccttctcctccctctcctcctccc 159462
>ref|NM_011381.2| Mus musculus sine oculis-related homeobox 3 homolog (Drosophila) (Six3), mRNA Length = 1651 Score = 46.1 bits (23), Expect = 0.099 Identities = 32/35 (91%) Strand = Plus / Minus Query: 45 tcccgtcgccgcctcctcacccgccgccgccgccg 79 ||||| |||||||||||| | |||||||||||||| Sbjct: 560 tcccgccgccgcctcctcccgcgccgccgccgccg 526
>ref|NM_013733.2| Mus musculus chromatin assembly factor 1, subunit A (p150) (Chaf1a), mRNA Length = 3309 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 375 gccgccgacgccgccgccgtcgcggag 401 ||||||| ||||||||||||||||||| Sbjct: 71 gccgccgccgccgccgccgtcgcggag 97
>gb|AC144768.2| Mus musculus BAC clone RP23-24K24 from chromosome 7, complete sequence Length = 230675 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Minus Query: 217 tcttcttctcctccgtctcctcctccc 243 |||||||||||||| |||||||||||| Sbjct: 155552 tcttcttctcctccttctcctcctccc 155526
>ref|NM_032451.1| Homo sapiens spire homolog 2 (Drosophila) (SPIRE2), mRNA Length = 3249 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Minus Query: 343 gccctgcgcccgccgcggcgccg 365 ||||||||||||||||||||||| Sbjct: 98 gccctgcgcccgccgcggcgccg 76
>ref|NM_014884.1| Homo sapiens splicing factor, arginine/serine-rich 14 (SFRS14), transcript variant 2, mRNA Length = 3663 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Minus Query: 57 ctcctcacccgccgccgccgccg 79 ||||||||||||||||||||||| Sbjct: 80 ctcctcacccgccgccgccgccg 58
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 53 ccgcctcctcacccgccgccgccgccg 79 |||||||||| |||||||||||||||| Sbjct: 11130 ccgcctcctcccccgccgccgccgccg 11156 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 53 ccgcctcctcacccgccgccgccg 76 |||||||||| ||||||||||||| Sbjct: 3937610 ccgcctcctcccccgccgccgccg 3937587
>ref|XM_742300.1| Aspergillus fumigatus Af293 pectate lyase (Afu8g05910) partial mRNA Length = 765 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 215 cctcttcttctcctccgtctcctcctc 241 |||||||||||||||| |||||||||| Sbjct: 10 cctcttcttctcctccctctcctcctc 36
>emb|CT009719.10| Mouse DNA sequence from clone RP23-65P17 on chromosome 17, complete sequence Length = 205369 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 375 gccgccgacgccgccgccgtcgcggag 401 ||||||| ||||||||||||||||||| Sbjct: 84673 gccgccgccgccgccgccgtcgcggag 84699
>gb|AC104100.6| Mus musculus BAC clone RP24-374D12 from chromosome 7, complete sequence Length = 139125 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 217 tcttcttctcctccgtctcctcctccc 243 |||||||||||||| |||||||||||| Sbjct: 122157 tcttcttctcctccttctcctcctccc 122183
>emb|Z84480.1|HS418A9 Human DNA sequence from clone RP3-418A9 on chromosome 6q21 Contains a pseudogene similar to calponin proteins, the 5' part of gene KIAA1028 and a CpG island, complete sequence Length = 121424 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Minus Query: 383 cgccgccgccgtcgcggaggagg 405 ||||||||||||||||||||||| Sbjct: 71123 cgccgccgccgtcgcggaggagg 71101
>gb|AY055110.1| Xanthomonas oryzae pv. oryzae KACC10331 BAC clone 4K15, complete sequence Length = 100258 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Minus Query: 53 ccgcctcctcacccgccgccgccgccg 79 |||||||||| |||||||||||||||| Sbjct: 90482 ccgcctcctcccccgccgccgccgccg 90456
>emb|X90871.1|MMSIX3GEN M.musculus mRNA for SIX3 protein Length = 1402 Score = 46.1 bits (23), Expect = 0.099 Identities = 32/35 (91%) Strand = Plus / Minus Query: 45 tcccgtcgccgcctcctcacccgccgccgccgccg 79 ||||| |||||||||||| | |||||||||||||| Sbjct: 335 tcccgccgccgcctcctcccgcgccgccgccgccg 301
>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29 Length = 295150 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Plus Query: 380 cgacgccgccgccgtcgcggagg 402 ||||||||||||||||||||||| Sbjct: 273569 cgacgccgccgccgtcgcggagg 273591
>gb|AC022457.8| Oryza sativa chromosome 10 BAC OSJNBa0006L06 genomic sequence, complete sequence Length = 162339 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Minus Query: 375 gccgccgacgccgccgccgtcgc 397 ||||||||||||||||||||||| Sbjct: 21300 gccgccgacgccgccgccgtcgc 21278 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 cctcctcacccgccgccgccgccg 79 |||| ||||||||||||||||||| Sbjct: 15373 cctcttcacccgccgccgccgccg 15350
>gb|AC118668.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0036G02, from chromosome 3, complete sequence Length = 153308 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Minus Query: 375 gccgccgacgccgccgccgtcgc 397 ||||||||||||||||||||||| Sbjct: 76979 gccgccgacgccgccgccgtcgc 76957
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 53 ccgcctcctcacccgccgccgccgccg 79 |||||||||| |||||||||||||||| Sbjct: 11379 ccgcctcctcccccgccgccgccgccg 11405
>gb|AE011624.1| Xanthomonas axonopodis pv. citri str. 306, section 2 of 469 of the complete genome Length = 11017 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 53 ccgcctcctcacccgccgccgccgccg 79 |||||||||| |||||||||||||||| Sbjct: 303 ccgcctcctcccccgccgccgccgccg 329
>gb|AC092385.4| Homo sapiens chromosome 16 clone RP4-597G12, complete sequence Length = 97218 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Plus Query: 343 gccctgcgcccgccgcggcgccg 365 ||||||||||||||||||||||| Sbjct: 72946 gccctgcgcccgccgcggcgccg 72968
>gb|AE012094.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 2 of 460 of the complete genome Length = 10542 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 53 ccgcctcctcacccgccgccgccgccg 79 |||||||||| |||||||||||||||| Sbjct: 303 ccgcctcctcccccgccgccgccgccg 329
>gb|AC092749.1| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OSJNBb0023M11, from chromosome 10, complete sequence Length = 138668 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 224 ctcctccgtctcctcctccccgccgct 250 ||||||||||||| ||||||||||||| Sbjct: 59744 ctcctccgtctccccctccccgccgct 59770
>dbj|AK135763.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length enriched library, clone:7420413E18 product:chromatin assembly factor 1, subunit A (p150), full insert sequence Length = 1205 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 375 gccgccgacgccgccgccgtcgcggag 401 ||||||| ||||||||||||||||||| Sbjct: 83 gccgccgccgccgccgccgtcgcggag 109
>gb|DP000052.1| Sus scrofa target 126 genomic scaffold Length = 432382 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Minus Query: 218 cttcttctcctccgtctcctcctcccc 244 ||||||||||||| ||||||||||||| Sbjct: 174609 cttcttctcctccttctcctcctcccc 174583
>gb|BC098096.1| Mus musculus sine oculis-related homeobox 3 homolog (Drosophila), mRNA (cDNA clone MGC:106488 IMAGE:6402835), complete cds Length = 1222 Score = 46.1 bits (23), Expect = 0.099 Identities = 32/35 (91%) Strand = Plus / Minus Query: 45 tcccgtcgccgcctcctcacccgccgccgccgccg 79 ||||| |||||||||||| | |||||||||||||| Sbjct: 180 tcccgccgccgcctcctcccgcgccgccgccgccg 146
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 53 ccgcctcctcacccgccgccgccgccg 79 |||||||||| |||||||||||||||| Sbjct: 10754 ccgcctcctcccccgccgccgccgccg 10780
>dbj|AK034839.1| Mus musculus 12 days embryo embryonic body between diaphragm region and neck cDNA, RIKEN full-length enriched library, clone:9430045O09 product:chromatin assembly factor 1, subunit A (p150), full insert sequence Length = 3309 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 375 gccgccgacgccgccgccgtcgcggag 401 ||||||| ||||||||||||||||||| Sbjct: 71 gccgccgccgccgccgccgtcgcggag 97
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Plus Query: 375 gccgccgacgccgccgccgtcgc 397 ||||||||||||||||||||||| Sbjct: 3742786 gccgccgacgccgccgccgtcgc 3742808 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 371 cactgccgccgacgccgccg 390 |||||||||||||||||||| Sbjct: 22276162 cactgccgccgacgccgccg 22276181 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 ctcacccgccgccgccgccg 79 |||||||||||||||||||| Sbjct: 20874509 ctcacccgccgccgccgccg 20874490 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 ctgccgccgacgccgccgcc 392 |||||||||||||||||||| Sbjct: 14978202 ctgccgccgacgccgccgcc 14978221
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Minus Query: 375 gccgccgacgccgccgccgtcgc 397 ||||||||||||||||||||||| Sbjct: 16676783 gccgccgacgccgccgccgtcgc 16676761 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 224 ctcctccgtctcctcctccccgccgct 250 ||||||||||||| ||||||||||||| Sbjct: 10139523 ctcctccgtctccccctccccgccgct 10139549 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 51 cgccgcctcctcacccgccgccgccgccg 79 |||||||||||| ||| |||||||||||| Sbjct: 21749187 cgccgcctcctcccccaccgccgccgccg 21749159 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 56 cctcctcacccgccgccgccgccga 80 ||||||| ||||||||||||||||| Sbjct: 16987916 cctcctcccccgccgccgccgccga 16987892 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 cctcctcacccgccgccgccgccg 79 ||||||| |||||||||||||||| Sbjct: 18955673 cctcctcccccgccgccgccgccg 18955650 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 cctcctcacccgccgccgccgccg 79 |||| ||||||||||||||||||| Sbjct: 16670856 cctcttcacccgccgccgccgccg 16670833 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 56 cctcctcacccgccgccgccgccgacgc 83 ||||||| ||||||||||||||||||| Sbjct: 15572305 cctcctccgccgccgccgccgccgacgc 15572332 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 ctgccgccgacgccgccgcc 392 |||||||||||||||||||| Sbjct: 4349676 ctgccgccgacgccgccgcc 4349657 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 375 gccgccgacgccgccgccgtcgcg 398 ||||||||||||||||||| |||| Sbjct: 2333507 gccgccgacgccgccgccgccgcg 2333484
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Plus Query: 56 cctcctcacccgccgccgccgcc 78 ||||||||||||||||||||||| Sbjct: 28286805 cctcctcacccgccgccgccgcc 28286827 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 62 cacccgccgccgccgccgacgcaccg 87 |||||||||||||||||| ||||||| Sbjct: 28755452 cacccgccgccgccgccggcgcaccg 28755427 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 376 ccgccgacgccgccgccgtcgc 397 |||||||||||||||||||||| Sbjct: 25579412 ccgccgacgccgccgccgtcgc 25579433 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 cgccgcctcctcacccgccgccgccgccga 80 ||||||| | |||||||||||||||||||| Sbjct: 2436090 cgccgccccatcacccgccgccgccgccga 2436119 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 375 gccgccgacgccgccgccgtcgcgg 399 ||||||||||||||||||| ||||| Sbjct: 25492583 gccgccgacgccgccgccgccgcgg 25492607 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 tgcctcccctcctcctctccc 42 ||||||||||||||||||||| Sbjct: 17481137 tgcctcccctcctcctctccc 17481117 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 373 ctgccgccgacgccgccgccgtcgc 397 ||||||||| ||||||||||||||| Sbjct: 17216518 ctgccgccgccgccgccgccgtcgc 17216542 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 cgccgacgccgccgccgtcgc 397 ||||||||||||||||||||| Sbjct: 10323523 cgccgacgccgccgccgtcgc 10323503 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 375 gccgccgacgccgccgccgtcgcgg 399 ||||||| ||||||||||||||||| Sbjct: 5028965 gccgccgccgccgccgccgtcgcgg 5028989 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 62 cacccgccgccgccgccgacg 82 ||||||||||||||||||||| Sbjct: 4402434 cacccgccgccgccgccgacg 4402454 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 cgacgccgccgccgtcgcgg 399 |||||||||||||||||||| Sbjct: 27903494 cgacgccgccgccgtcgcgg 27903513 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 375 gccgccgacgccgccgccgtcgcggagg 402 ||||||| ||||||||||| |||||||| Sbjct: 25293769 gccgccgccgccgccgccgccgcggagg 25293742 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 52 gccgcctcctcacccgccgccgccgccg 79 |||||||||||| || |||||||||||| Sbjct: 24280913 gccgcctcctcatcctccgccgccgccg 24280940 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 cctcccctcctcctctcccc 43 |||||||||||||||||||| Sbjct: 18634561 cctcccctcctcctctcccc 18634580 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 376 ccgccgacgccgccgccgtc 395 |||||||||||||||||||| Sbjct: 17673142 ccgccgacgccgccgccgtc 17673123 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 cctcccctcctcctctcccc 43 |||||||||||||||||||| Sbjct: 6556546 cctcccctcctcctctcccc 6556565 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 375 gccgccgacgccgccgccgtcgcg 398 ||||||||||||||||||| |||| Sbjct: 3788314 gccgccgacgccgccgccgccgcg 3788291 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 375 gccgccgacgccgccgccgt 394 |||||||||||||||||||| Sbjct: 3062396 gccgccgacgccgccgccgt 3062415
>dbj|AB221698.1| Mus musculus adult male liver DNA, clone:V02Y055M03 Length = 854 Score = 46.1 bits (23), Expect = 0.099 Identities = 32/35 (91%) Strand = Plus / Minus Query: 45 tcccgtcgccgcctcctcacccgccgccgccgccg 79 ||||| |||||||||||| | |||||||||||||| Sbjct: 153 tcccgccgccgcctcctcccgcgccgccgccgccg 119
>gb|BC094426.1| Mus musculus sine oculis-related homeobox 3 homolog (Drosophila), mRNA (cDNA clone MGC:117122 IMAGE:6855602), complete cds Length = 3408 Score = 46.1 bits (23), Expect = 0.099 Identities = 32/35 (91%) Strand = Plus / Minus Query: 45 tcccgtcgccgcctcctcacccgccgccgccgccg 79 ||||| |||||||||||| | |||||||||||||| Sbjct: 363 tcccgccgccgcctcctcccgcgccgccgccgccg 329
>gb|AF527951.1| Xanthomonas campestris pv. campestris conserved hypothetical protein (orf268), conserved hypothetical protein (orf398), TonB (tonB), ExbB (exbB), ExbD1 (exbD1), and ExbD2 (exbD2) genes, complete cds Length = 4981 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 53 ccgcctcctcacccgccgccgccgccg 79 |||||||||| |||||||||||||||| Sbjct: 2620 ccgcctcctcccccgccgccgccgccg 2646
>gb|BC011119.1| Homo sapiens, clone IMAGE:3047997, mRNA Length = 1842 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Minus Query: 343 gccctgcgcccgccgcggcgccg 365 ||||||||||||||||||||||| Sbjct: 50 gccctgcgcccgccgcggcgccg 28
>dbj|AP004223.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1033B05 Length = 138882 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Minus Query: 375 gccgccgacgccgccgccgtcgc 397 ||||||||||||||||||||||| Sbjct: 64284 gccgccgacgccgccgccgtcgc 64262
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Minus Query: 64 cccgccgccgccgccgacgcacc 86 ||||||||||||||||||||||| Sbjct: 6850130 cccgccgccgccgccgacgcacc 6850108
>gb|AF518874.1| Homo sapiens arginine/serine-rich 14 splicing factor (SFRS14) mRNA, complete cds Length = 3663 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Minus Query: 57 ctcctcacccgccgccgccgccg 79 ||||||||||||||||||||||| Sbjct: 80 ctcctcacccgccgccgccgccg 58
>dbj|AP003436.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0470A12 Length = 185095 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Minus Query: 53 ccgcctcctcacccgccgccgccgccg 79 |||||||||| |||||||||||||||| Sbjct: 117279 ccgcctcctcccccgccgccgccgccg 117253 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 58 tcctcacccgccgccgccgccg 79 |||||||||||||||||||||| Sbjct: 31334 tcctcacccgccgccgccgccg 31313
>dbj|AP004182.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1199_H01 Length = 107252 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Plus Query: 65 ccgccgccgccgccgacgcaccg 87 ||||||||||||||||||||||| Sbjct: 22645 ccgccgccgccgccgacgcaccg 22667
>dbj|AP003804.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1065_B06 Length = 113170 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Plus Query: 65 ccgccgccgccgccgacgcaccg 87 ||||||||||||||||||||||| Sbjct: 96679 ccgccgccgccgccgacgcaccg 96701
>dbj|AP005395.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0623A10 Length = 156517 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Plus Query: 56 cctcctcacccgccgccgccgcc 78 ||||||||||||||||||||||| Sbjct: 84834 cctcctcacccgccgccgccgcc 84856
>dbj|AP005316.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0527E02 Length = 176826 Score = 46.1 bits (23), Expect = 0.099 Identities = 30/31 (96%), Gaps = 1/31 (3%) Strand = Plus / Plus Query: 56 cctcctcacccgccgccgccgccgacgcacc 86 |||||||||| |||||||||||||||||||| Sbjct: 57226 cctcctcacc-gccgccgccgccgacgcacc 57255
>dbj|AP003984.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1046_F07 Length = 114184 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Plus Query: 65 ccgccgccgccgccgacgcaccg 87 ||||||||||||||||||||||| Sbjct: 54807 ccgccgccgccgccgacgcaccg 54829
>dbj|AK121492.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033000E11, full insert sequence Length = 5281 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Plus Query: 375 gccgccgacgccgccgccgtcgc 397 ||||||||||||||||||||||| Sbjct: 37 gccgccgacgccgccgccgtcgc 59
>emb|Z95386.1|XCEXBTONB X.campestris exbD1, exbD2, exbB and tonB genes Length = 3631 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Minus Query: 53 ccgcctcctcacccgccgccgccgccg 79 |||||||||| |||||||||||||||| Sbjct: 3346 ccgcctcctcccccgccgccgccgccg 3320
>dbj|AK109538.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-D08, full insert sequence Length = 2492 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Minus Query: 375 gccgccgacgccgccgccgtcgc 397 ||||||||||||||||||||||| Sbjct: 1485 gccgccgacgccgccgccgtcgc 1463
>gb|BC053740.1| Mus musculus chromatin assembly factor 1, subunit A (p150), mRNA (cDNA clone MGC:59315 IMAGE:6504838), complete cds Length = 3333 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 375 gccgccgacgccgccgccgtcgcggag 401 ||||||| ||||||||||||||||||| Sbjct: 41 gccgccgccgccgccgccgtcgcggag 67
>dbj|AK061485.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-A02, full insert sequence Length = 1356 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Plus Query: 56 cctcctcacccgccgccgccgcc 78 ||||||||||||||||||||||| Sbjct: 235 cctcctcacccgccgccgccgcc 257
>gb|AC003038.1|AC003038 Human DNA from chromosome 19-specific cosmid R30923, genomic sequence, complete sequence Length = 40016 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Plus Query: 57 ctcctcacccgccgccgccgccg 79 ||||||||||||||||||||||| Sbjct: 592 ctcctcacccgccgccgccgccg 614
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 53 ccgcctcctcacccgccgccgccgccg 79 |||||||||| |||||||||||||||| Sbjct: 11385 ccgcctcctcccccgccgccgccgccg 11411
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Minus Query: 375 gccgccgacgccgccgccgtcgc 397 ||||||||||||||||||||||| Sbjct: 16685823 gccgccgacgccgccgccgtcgc 16685801 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 224 ctcctccgtctcctcctccccgccgct 250 ||||||||||||| ||||||||||||| Sbjct: 10145562 ctcctccgtctccccctccccgccgct 10145588 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 51 cgccgcctcctcacccgccgccgccgccg 79 |||||||||||| ||| |||||||||||| Sbjct: 21760850 cgccgcctcctcccccaccgccgccgccg 21760822 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 56 cctcctcacccgccgccgccgccga 80 ||||||| ||||||||||||||||| Sbjct: 16996956 cctcctcccccgccgccgccgccga 16996932 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 cctcctcacccgccgccgccgccg 79 ||||||| |||||||||||||||| Sbjct: 18966903 cctcctcccccgccgccgccgccg 18966880 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 cctcctcacccgccgccgccgccg 79 |||| ||||||||||||||||||| Sbjct: 16679896 cctcttcacccgccgccgccgccg 16679873 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 56 cctcctcacccgccgccgccgccgacgc 83 ||||||| ||||||||||||||||||| Sbjct: 15580546 cctcctccgccgccgccgccgccgacgc 15580573 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 ctgccgccgacgccgccgcc 392 |||||||||||||||||||| Sbjct: 4350497 ctgccgccgacgccgccgcc 4350478 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 375 gccgccgacgccgccgccgtcgcg 398 ||||||||||||||||||| |||| Sbjct: 2333458 gccgccgacgccgccgccgccgcg 2333435
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Plus Query: 375 gccgccgacgccgccgccgtcgc 397 ||||||||||||||||||||||| Sbjct: 3742760 gccgccgacgccgccgccgtcgc 3742782 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 371 cactgccgccgacgccgccg 390 |||||||||||||||||||| Sbjct: 22204507 cactgccgccgacgccgccg 22204526 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 ctcacccgccgccgccgccg 79 |||||||||||||||||||| Sbjct: 20800723 ctcacccgccgccgccgccg 20800704 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 ctgccgccgacgccgccgcc 392 |||||||||||||||||||| Sbjct: 14932485 ctgccgccgacgccgccgcc 14932504
>emb|AL713933.6|CNS07YPE Oryza sativa chromosome 12, . BAC OJ1041_D02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104421 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Minus Query: 375 gccgccgacgccgccgccgtcgc 397 ||||||||||||||||||||||| Sbjct: 6887 gccgccgacgccgccgccgtcgc 6865
>gb|AC151001.2| Mus musculus BAC clone RP23-45M16 from 7, complete sequence Length = 176698 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 217 tcttcttctcctccgtctcctcctccc 243 |||||||||||||| |||||||||||| Sbjct: 81864 tcttcttctcctccttctcctcctccc 81890
>gb|AC004447.1|AC004447 Homo sapiens chromosome 19, overlapping cosmids R27918 and R33775, complete sequence Length = 73007 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Plus Query: 57 ctcctcacccgccgccgccgccg 79 ||||||||||||||||||||||| Sbjct: 57575 ctcctcacccgccgccgccgccg 57597
>emb|AL731652.1| Dog DNA sequence from clone RP81-70I6, complete sequence Length = 169460 Score = 46.1 bits (23), Expect = 0.099 Identities = 29/31 (93%) Strand = Plus / Minus Query: 35 cctctccccgtcccgtcgccgcctcctcacc 65 |||||||||| ||| |||||||||||||||| Sbjct: 119744 cctctccccgccccctcgccgcctcctcacc 119714
>dbj|D83145.1| Mus musculus mRNA for Six3b, partial cds Length = 1165 Score = 46.1 bits (23), Expect = 0.099 Identities = 32/35 (91%) Strand = Plus / Minus Query: 45 tcccgtcgccgcctcctcacccgccgccgccgccg 79 ||||| |||||||||||| | |||||||||||||| Sbjct: 146 tcccgccgccgcctcctcccgcgccgccgccgccg 112
>dbj|D83144.1| Mus musculus mRNA for Six3a, complete cds Length = 1773 Score = 46.1 bits (23), Expect = 0.099 Identities = 32/35 (91%) Strand = Plus / Minus Query: 45 tcccgtcgccgcctcctcacccgccgccgccgccg 79 ||||| |||||||||||| | |||||||||||||| Sbjct: 821 tcccgccgccgcctcctcccgcgccgccgccgccg 787
>gb|AC166798.3| Mus musculus chromosome 3, clone RP23-442J19, complete sequence Length = 216754 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 141276 tcttcttctcctccttctcctcctcc 141301
>ref|XM_550428.1| Oryza sativa (japonica cultivar-group), mRNA Length = 809 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 224 ctcctccgtctcctcctccccgccgc 249 ||||||| |||||||||||||||||| Sbjct: 403 ctcctccttctcctcctccccgccgc 378
>gb|AC122005.3| Mus musculus chromosome 5 clone RP24-340B11, complete sequence Length = 183264 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 93321 tcttcttctcctccttctcctcctcc 93296
>ref|XM_521033.1| PREDICTED: Pan troglodytes similar to RNA-binding protein 10 (RNA binding motif protein 10) (S1-1 protein) (LOC465600), mRNA Length = 1803 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 224 ctcctccgtctcctcctccccgccgc 249 ||||||| |||||||||||||||||| Sbjct: 1335 ctcctccttctcctcctccccgccgc 1310
>gb|AC165085.3| Mus musculus BAC clone RP23-222G22 from chromosome 6, complete sequence Length = 201337 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 73986 tcttcttctcctccttctcctcctcc 74011
>gb|AC153585.16| Mus musculus 6 BAC RP23-432A17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 162497 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 56950 tcttcttctcctccttctcctcctcc 56925
>ref|XM_482604.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1221 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 375 gccgccgacgccgccgccgtcgcgga 400 ||||||||||||||||||| |||||| Sbjct: 65 gccgccgacgccgccgccgccgcgga 40
>ref|XM_482165.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1875 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 376 ccgccgacgccgccgccgtcgcggaggagg 405 |||||| |||||||||||| |||||||||| Sbjct: 343 ccgccgccgccgccgccgtggcggaggagg 372
>ref|XM_480615.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2107 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 54 cgcctcctcacccgccgccgccgccg 79 ||||||||| |||||||||||||||| Sbjct: 76 cgcctcctctcccgccgccgccgccg 101
>ref|XM_480614.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2107 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 54 cgcctcctcacccgccgccgccgccg 79 ||||||||| |||||||||||||||| Sbjct: 80 cgcctcctctcccgccgccgccgccg 105
>ref|NM_193671.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 231 Score = 44.1 bits (22), Expect = 0.39 Identities = 33/36 (91%), Gaps = 3/36 (8%) Strand = Plus / Minus Query: 47 ccgtcgccgcctcc---tcacccgccgccgccgccg 79 |||||||||||||| ||||||||||||||||||| Sbjct: 70 ccgtcgccgcctccgcgtcacccgccgccgccgccg 35
>ref|XM_479054.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1233 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 377 cgccgacgccgccgccgtcgcggagg 402 ||||||||||||||||||||| |||| Sbjct: 273 cgccgacgccgccgccgtcgccgagg 298
>ref|XM_470701.1| Oryza sativa (japonica cultivar-group), mRNA Length = 270 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 287 cccgccctcgccgctctggctc 308 |||||||||||||||||||||| Sbjct: 60 cccgccctcgccgctctggctc 39
>gb|AC116853.12| Mus musculus chromosome 1, clone RP24-400M20, complete sequence Length = 188514 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 39021 tcttcttctcctccttctcctcctcc 39046
>gb|AC164423.2| Mus musculus chromosome 3, clone RP24-361M10, complete sequence Length = 151556 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 118984 tcttcttctcctccttctcctcctcc 119009
>gb|AC157598.4| Mus musculus BAC clone RP23-193D3 from chromosome 17, complete sequence Length = 222399 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 129080 tcttcttctcctccttctcctcctcc 129055
>gb|AY591906.1| Gallus gallus SP8 mRNA, complete cds Length = 2864 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Minus Query: 46 cccgtcgccgcctcctcacccgccgccgccgccg 79 |||| ||||||| |||| |||||||||||||||| Sbjct: 408 cccgccgccgccgcctcccccgccgccgccgccg 375
>gb|AC115724.10| Mus musculus chromosome 3, clone RP23-20L18, complete sequence Length = 208154 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 186462 tcttcttctcctccttctcctcctcc 186437
>ref|XM_865612.1| PREDICTED: Bos taurus similar to Homeobox protein Hox-A11 (Hox-1.9), transcript variant 2 (LOC533625), mRNA Length = 2256 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 373 ctgccgccgacgccgccgccgtcgcggagg 402 ||||||||| ||||||||||| |||||||| Sbjct: 626 ctgccgccgccgccgccgccgccgcggagg 597
>gb|AC131339.3| Mus musculus BAC clone RP23-226F20 from chromosome 16, complete sequence Length = 180384 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 215 cctcttcttctcctccgtctcctcctcccc 244 |||||||||||||||| |||||||||||| Sbjct: 106430 cctcttcttctcctcctcctcctcctcccc 106459
>gb|AC158302.3| Mus musculus chromosome 5, clone RP24-61O18, complete sequence Length = 215326 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 59734 tcttcttctcctccttctcctcctcc 59759
>gb|DQ180746.1| Oryza sativa (japonica cultivar-group) class II small heat shock protein mRNA, complete cds Length = 784 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 224 ctcctccgtctcctcctccccgccgc 249 ||||||| |||||||||||||||||| Sbjct: 378 ctcctccttctcctcctccccgccgc 353
>gb|AC091458.5| Mus musculus chromosome 12, clone RP23-68M8, complete sequence Length = 289751 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 140818 tcttcttctcctccttctcctcctcc 140793
>gb|AC154396.11| Mus musculus chromosome 3, clone RP24-254D5, complete sequence Length = 153799 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 23864 tcttcttctcctccttctcctcctcc 23839
>gb|AC165966.3| Mus musculus BAC clone RP23-259L2 from chromosome 17, complete sequence Length = 194944 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 119283 tcttcttctcctccttctcctcctcc 119308
>gb|AC158549.8| Mus musculus chromosome 19, clone RP24-216K4, complete sequence Length = 195500 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 80195 tcttcttctcctccttctcctcctcc 80170
>gb|AC116593.4| Mus musculus BAC clone RP24-91C7 from chromosome 8, complete sequence Length = 174603 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 167083 tcttcttctcctccttctcctcctcc 167058
>gb|AC118009.7| Mus musculus chromosome 8, clone RP23-442H2, complete sequence Length = 208458 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 162154 tcttcttctcctccttctcctcctcc 162179
>ref|XR_002610.1| PREDICTED: Mus musculus hypothetical protein LOC669636 (LOC669636), mRNA Length = 743 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 336 tcttcttctcctccttctcctcctcc 311
>ref|XR_001825.1| PREDICTED: Mus musculus hypothetical protein LOC666083 (LOC666083), mRNA Length = 743 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 336 tcttcttctcctccttctcctcctcc 311
>emb|CR762443.6| Zebrafish DNA sequence from clone DKEY-3A5 in linkage group 10, complete sequence Length = 213185 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 225 tcctccgtctcctcctccccgc 246 |||||||||||||||||||||| Sbjct: 84960 tcctccgtctcctcctccccgc 84939
>gb|AC123815.3| Mus musculus BAC clone RP24-238O19 from chromosome 9, complete sequence Length = 136592 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 113133 tcttcttctcctccttctcctcctcc 113108
>gb|AC125396.4| Mus musculus BAC clone RP24-69M4 from chromosome 16, complete sequence Length = 179186 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 168951 tcttcttctcctccttctcctcctcc 168926
>gb|AC139348.4| Mus musculus BAC clone RP24-336F19 from chromosome 18, complete sequence Length = 145012 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 217 tcttcttctcctccgtctcctcctcc 242 ||||||||| |||||||||||||||| Sbjct: 26545 tcttcttcttctccgtctcctcctcc 26520
>gb|AC125152.5| Mus musculus BAC clone RP24-366J2 from chromosome 14, complete sequence Length = 134122 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 68473 tcttcttctcctccttctcctcctcc 68498
>gb|AC126268.3| Mus musculus BAC clone RP23-227O11 from chromosome 12, complete sequence Length = 201581 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 217 tcttcttctcctccgtctcctcctcc 242 ||||||||||||| |||||||||||| Sbjct: 128863 tcttcttctcctctgtctcctcctcc 128838
>gb|AC122821.4| Mus musculus BAC clone RP23-201I4 from chromosome 17, complete sequence Length = 220013 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 215 cctcttcttctcctccgtctcctcct 240 |||||||||||||||| ||||||||| Sbjct: 133354 cctcttcttctcctccttctcctcct 133329
>gb|AC128672.4| Mus musculus BAC clone RP23-136O15 from chromosome 18, complete sequence Length = 215137 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 217 tcttcttctcctccgtctcctcctcc 242 ||||||||||||||||||||| |||| Sbjct: 144931 tcttcttctcctccgtctccttctcc 144906
>gb|AC133193.3| Mus musculus BAC clone RP23-396L1 from chromosome 2, complete sequence Length = 180931 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 100954 tcttcttctcctccttctcctcctcc 100979
>gb|AC124581.4| Mus musculus BAC clone RP23-116E3 from chromosome 13, complete sequence Length = 205173 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 100301 tcttcttctcctccttctcctcctcc 100326
>gb|AC091250.2| Mus musculus strain C57BL6/J chromosome 5 clone RP23-315E2, complete sequence Length = 201395 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 93392 tcttcttctcctccttctcctcctcc 93417
>gb|AC127573.4| Mus musculus BAC clone RP24-231H7 from chromosome 9, complete sequence Length = 148263 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 143398 tcttcttctcctccttctcctcctcc 143423
>gb|AC124419.4| Mus musculus BAC clone RP24-319P11 from chromosome 18, complete sequence Length = 140103 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 217 tcttcttctcctccgtctcctcctcc 242 ||||||||| |||||||||||||||| Sbjct: 16192 tcttcttcttctccgtctcctcctcc 16217
>gb|AC121771.3| Mus musculus BAC clone RP23-348H21 from chromosome 3, complete sequence Length = 190309 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 114542 tcttcttctcctccttctcctcctcc 114517
>gb|AC127434.1| Mus musculus BAC clone RP23-189J11 from 19, complete sequence Length = 199422 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 132403 tcttcttctcctccttctcctcctcc 132378
>gb|AC146086.2| Pan troglodytes BAC clone RP43-15D2 from 7, complete sequence Length = 135353 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 215 cctcttcttctcctccgtctcctcctcccc 244 |||| ||||||||||| ||||||||||||| Sbjct: 99544 cctcctcttctcctccctctcctcctcccc 99573
>gb|DQ249182.1| Homo sapiens isolate 541CLS41 haplotype HLA-B5001/HLA-Cw0602 genomic sequence Length = 346809 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 11 ccagctcccgctgcctcccctc 32 |||||||||||||||||||||| Sbjct: 221499 ccagctcccgctgcctcccctc 221478
>gb|DQ249180.1| Homo sapiens isolate 495CLS44 haplotype HLA-B570101/HLA-Cw0602 genomic sequence Length = 265420 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 11 ccagctcccgctgcctcccctc 32 |||||||||||||||||||||| Sbjct: 224663 ccagctcccgctgcctcccctc 224642
>gb|DQ249177.1| Homo sapiens isolate 218CLS60 haplotype HLA-B15010101/HLA-Cw030401 genomic sequence Length = 351341 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 11 ccagctcccgctgcctcccctc 32 |||||||||||||||||||||| Sbjct: 236420 ccagctcccgctgcctcccctc 236399
>gb|DQ249176.1| Homo sapiens isolate 218CLS51 haplotype HLA-B140201/HLA-Cw0802 genomic sequence Length = 363675 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 11 ccagctcccgctgcctcccctc 32 |||||||||||||||||||||| Sbjct: 236222 ccagctcccgctgcctcccctc 236201
>gb|DQ249174.1| Homo sapiens isolate 144CLS49 haplotype HLA-B080101/HLA-Cw070101 genomic sequence Length = 338544 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 11 ccagctcccgctgcctcccctc 32 |||||||||||||||||||||| Sbjct: 232464 ccagctcccgctgcctcccctc 232443
>gb|DQ249173.1| Homo sapiens isolate 135CLS51 haplotype HLA-B140201/HLA-Cw0802 genomic sequence Length = 336776 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 11 ccagctcccgctgcctcccctc 32 |||||||||||||||||||||| Sbjct: 215327 ccagctcccgctgcctcccctc 215306
>gb|DQ249172.1| Homo sapiens isolate 135CLS49 haplotype HLA-B080101/HLA-Cw070101 genomic sequence Length = 342745 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 11 ccagctcccgctgcctcccctc 32 |||||||||||||||||||||| Sbjct: 213077 ccagctcccgctgcctcccctc 213056
>gb|AC101889.6| Mus musculus chromosome 3, clone RP23-465M13, complete sequence Length = 186900 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 22826 tcttcttctcctccttctcctcctcc 22851
>emb|AL662833.4| Human DNA sequence from clone XXbac-101P6 on chromosome 6 contains the gene for HCR, the TCF19 gene for transcription factor 19, the POU5F1 gene for POU domain, class 5, transcription factor 1, a putative novel transcript, the HLA-C gene for major histocompatibility complex, class I, C, a ubiquitin specific protease 8 (USP8) pseudogene, a ribosomal protein L3 (RPL3) pseudogene, a WAS protein family, member 3 (WASF3) pseudogene and three CpG islands, complete sequence Length = 168887 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 11 ccagctcccgctgcctcccctc 32 |||||||||||||||||||||| Sbjct: 15672 ccagctcccgctgcctcccctc 15693
>emb|AL513366.11| Human DNA sequence from clone CTD-2522E6 on chromosome X Contains the RGN gene for regucalcin (senescence marker protein-30) (RC, SMP30), the gene for neuronal protein 17.3 (P17.3), the RBM10 gene for RNA binding motif protein 10 (MGC997, MGC1132, DXS8237E, KIAA0122), an inositol 1,3,4-triphosphate 5/6 kinase (ITPK1) pseudogene, the UBE1 gene for ubiquitin-activating enzyme E1 (A1S9T and BN75 temperature sensitivity complementing) (A1S9, A1ST, GXP1, A1S9T, UBE1X, MGC4781), the 5' UTR of the PCTK1 gene for PCTAIRE protein kinase 1 and five CpG islands, complete sequence Length = 145456 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 224 ctcctccgtctcctcctccccgccgc 249 ||||||| |||||||||||||||||| Sbjct: 119000 ctcctccttctcctcctccccgccgc 118975
>gb|BT009908.1| Homo sapiens homeo box C13 mRNA, complete cds Length = 993 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 51 cgccgcctcctcacccgccgccgccgccga 80 |||||||||||| |||||||||||||||| Sbjct: 112 cgccgcctcctcctccgccgccgccgccga 83
>emb|AL136141.13| Human DNA sequence from clone RP11-138E2 on chromosome 9q34.11-34.3 Contains the 5' end of the FNBP1 gene for formin binding protein 1 (FBP17), the GPR107 gene for G protein-coupled receptor 107 (LUSTR1) and three CpG islands, complete sequence Length = 127883 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 233 ctcctcctccccgccgctccac 254 |||||||||||||||||||||| Sbjct: 74328 ctcctcctccccgccgctccac 74349
>gb|AC164104.5| Mus musculus BAC clone RP23-428G7 from chromosome 6, complete sequence Length = 199234 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 215 cctcttcttctcctccgtctcctcctcccc 244 |||||||| ||||||| ||||||||||||| Sbjct: 196803 cctcttctcctcctccttctcctcctcccc 196774
>gb|AC158342.4| Mus musculus chromosome 1, clone RP23-12H12, complete sequence Length = 224295 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 69563 tcttcttctcctccttctcctcctcc 69588
>gb|AC084765.9| Oryza sativa chromosome 3 BAC OSJNBa0090L05 genomic sequence, complete sequence Length = 147130 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 287 cccgccctcgccgctctggctc 308 |||||||||||||||||||||| Sbjct: 36393 cccgccctcgccgctctggctc 36414
>gb|AC122210.5| Mus musculus BAC clone RP23-96G7 from chromosome 10, complete sequence Length = 231988 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 177184 tcttcttctcctccttctcctcctcc 177159
>gb|AC163344.2| Mus musculus BAC clone RP24-66I20 from chromosome 9, complete sequence Length = 221000 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 11078 tcttcttctcctccttctcctcctcc 11103
>emb|AL731617.3|OSJN00261 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0076N16, complete sequence Length = 146313 Score = 44.1 bits (22), Expect = 0.39 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Minus Query: 50 tcgccgcctcctcacccgccgccgccgccgacgc 83 |||||||| |||| |||||||||||||||||||| Sbjct: 116610 tcgccgcc-cctcccccgccgccgccgccgacgc 116578
>emb|AL662938.3|OSJN00138 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ990528_30, complete sequence Length = 88547 Score = 44.1 bits (22), Expect = 0.39 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Minus Query: 50 tcgccgcctcctcacccgccgccgccgccgacgc 83 |||||||| |||| |||||||||||||||||||| Sbjct: 12124 tcgccgcc-cctcccccgccgccgccgccgacgc 12092
>emb|AL589701.9| Mouse DNA sequence from clone RP23-202F3 on chromosome 13 Contains a novel gene and the 3' end of a novel gene (1190005B03Rik), complete sequence Length = 219200 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 27537 tcttcttctcctccatctcctcctcc 27562
>gb|AC153519.9| Mus musculus 10 BAC RP23-442N6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 197257 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 195679 tcttcttctcctccttctcctcctcc 195654
>gb|BT008247.1| Synthetic construct Homo sapiens homeo box C13 mRNA, partial cds Length = 993 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 51 cgccgcctcctcacccgccgccgccgccga 80 |||||||||||| |||||||||||||||| Sbjct: 112 cgccgcctcctcctccgccgccgccgccga 83
>emb|CR937788.1| Single read from an extremity of a cDNA clone made from Aedes aegypti total adult females. 3-prime end of clone KW0AAB1YE22BBM1 from strain Liverpool of Aedes aegypti (yellow fever mosquito) Length = 857 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 376 ccgccgacgccgccgccgtcgc 397 |||||||||||||||||||||| Sbjct: 189 ccgccgacgccgccgccgtcgc 210
>emb|AL645566.15| Mouse DNA sequence from clone RP23-398M13 on chromosome 11 Contains a CpG island, complete sequence Length = 192808 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 24679 tcttcttctcctccttctcctcctcc 24654 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 217 tcttcttctcctccgtctcctcct 240 |||||||||||||| ||||||||| Sbjct: 25026 tcttcttctcctccttctcctcct 25003
>emb|AL662891.9| Mouse DNA sequence from clone RP23-20N14 on chromosome 11 Contains the Psme4 gene for proteasome (prosome, macropain) activator subunit 4, the Gpr75 gene for G protein-coupled receptor 75, a novel pseudogene, a PDZ and LIM domain 1 (elfin) (Pdlim1) pseudogene, two novel genes, the 5' end of the Asb3 gene for ankyrin repeat and SOCS box-containing protein 3, a methyl-CpG binding domain protein 2 interacting protein (Mbdin) pseudogene and a CpG island, complete sequence Length = 244971 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 218 cttcttctcctccgtctcctcctccc 243 ||||||||||||| |||||||||||| Sbjct: 51370 cttcttctcctccttctcctcctccc 51395
>emb|CR847794.5| Human DNA sequence from clone DAMA-213L4 on chromosome 6, complete sequence Length = 59046 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 11 ccagctcccgctgcctcccctc 32 |||||||||||||||||||||| Sbjct: 12656 ccagctcccgctgcctcccctc 12677
>emb|CR759815.3| Human DNA sequence from clone DAMC-88G10 on chromosome 6, complete sequence Length = 102782 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 11 ccagctcccgctgcctcccctc 32 |||||||||||||||||||||| Sbjct: 21162 ccagctcccgctgcctcccctc 21183
>emb|CR753819.5| Human DNA sequence from clone DADB-141O4 on chromosome 6, complete sequence Length = 81418 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 11 ccagctcccgctgcctcccctc 32 |||||||||||||||||||||| Sbjct: 75732 ccagctcccgctgcctcccctc 75753
>gb|AC111152.2| Homo sapiens chromosome 15, clone CTD-2022H16, complete sequence Length = 80119 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 38881 tcttcttctcctccttctcctcctcc 38906
>ref|NM_015033.2| Homo sapiens formin binding protein 1 (FNBP1), mRNA Length = 5457 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 233 ctcctcctccccgccgctccac 254 |||||||||||||||||||||| Sbjct: 57 ctcctcctccccgccgctccac 36
>dbj|AP004611.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1005_B10 Length = 142680 Score = 44.1 bits (22), Expect = 0.39 Identities = 33/36 (91%), Gaps = 3/36 (8%) Strand = Plus / Minus Query: 47 ccgtcgccgcctcc---tcacccgccgccgccgccg 79 |||||||||||||| ||||||||||||||||||| Sbjct: 33645 ccgtcgccgcctccgcgtcacccgccgccgccgccg 33610
>emb|CR611726.1| full-length cDNA clone CS0DK002YP12 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 2370 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 51 cgccgcctcctcacccgccgccgccgccga 80 |||||||||||| |||||||||||||||| Sbjct: 254 cgccgcctcctcctccgccgccgccgccga 225
>dbj|AK023681.1| Homo sapiens cDNA FLJ13619 fis, clone PLACE1010926, weakly similar to HYPOTHETICAL 72.2 KD PROTEIN C12C2.05C IN CHROMOSOME II Length = 1977 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 233 ctcctcctccccgccgctccac 254 |||||||||||||||||||||| Sbjct: 30 ctcctcctccccgccgctccac 9
>gb|M58028.1|HUMUBIQAA Homo sapiens ubiquitin-activating enzyme E1 (UBE1) mRNA, complete cds Length = 3504 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 224 ctcctccgtctcctcctccccgccgc 249 ||||||| |||||||||||||||||| Sbjct: 60 ctcctccttctcctcctccccgccgc 35
>gb|AY029160.1| Homo sapiens alpha helical coiled-coil rod protein (HCR) mRNA, psoriasis-associated allele, complete cds Length = 2349 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 11 ccagctcccgctgcctcccctc 32 |||||||||||||||||||||| Sbjct: 505 ccagctcccgctgcctcccctc 484
>gb|AC023154.5| Homo sapiens chromosome 4 clone RP11-752D24, complete sequence Length = 187004 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 216 ctcttcttctcctccgtctcct 237 |||||||||||||||||||||| Sbjct: 88143 ctcttcttctcctccgtctcct 88164
>gb|AF255676.1|AF255676 Homo sapiens homeoprotein C13 (HOXC13) mRNA, complete cds Length = 2402 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 51 cgccgcctcctcacccgccgccgccgccga 80 |||||||||||| |||||||||||||||| Sbjct: 227 cgccgcctcctcctccgccgccgccgccga 198
>gb|AC160137.2| Mus musculus BAC clone RP23-136A1 from chromosome 9, complete sequence Length = 241917 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 22859 tcttcttctcctccttctcctcctcc 22834
>gb|AC154203.2| Mus musculus BAC clone RP24-387L1 from chromosome 13, complete sequence Length = 174845 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 108598 tcttcttctcctccttctcctcctcc 108623
>gb|AC157278.2| Mus musculus BAC clone RP23-153L22 from chromosome 12, complete sequence Length = 199381 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 32414 tcttcttctcctccttctcctcctcc 32439 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 217 tcttcttctcctccgtctcctcct 240 |||||||||||||| ||||||||| Sbjct: 32441 tcttcttctcctccttctcctcct 32464 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 217 tcttcttctcctccgtctcctcct 240 |||||||||||||| ||||||||| Sbjct: 32378 tcttcttctcctccttctcctcct 32401
>dbj|AK033636.1| Mus musculus adult male cecum cDNA, RIKEN full-length enriched library, clone:9130206D17 product:unclassifiable, full insert sequence Length = 537 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 466 tcttcttctcctccttctcctcctcc 441
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.39 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Minus Query: 50 tcgccgcctcctcacccgccgccgccgccgacgc 83 |||||||| |||| |||||||||||||||||||| Sbjct: 24556979 tcgccgcc-cctcccccgccgccgccgccgacgc 24556947 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 50 tcgccgcctcctcacccgccgccgccgccg 79 ||||||||||||| ||||||||||||||| Sbjct: 22232922 tcgccgcctcctccaccgccgccgccgccg 22232893 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 62 cacccgccgccgccgccgacg 82 ||||||||||||||||||||| Sbjct: 19799033 cacccgccgccgccgccgacg 19799013 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 373 ctgccgccgacgccgccgccgtcgc 397 ||||||||| ||||||||||||||| Sbjct: 12489064 ctgccgccgccgccgccgccgtcgc 12489088 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 tcacccgccgccgccgccgac 81 ||||||||||||||||||||| Sbjct: 12117948 tcacccgccgccgccgccgac 12117968 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 65 ccgccgccgccgccgacgcaccgcacctc 93 |||||||||||||||||||| | |||||| Sbjct: 8432950 ccgccgccgccgccgacgcatcccacctc 8432978 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 ccgccgccgccgccgacgca 84 |||||||||||||||||||| Sbjct: 33843491 ccgccgccgccgccgacgca 33843472 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 ccgccgccgccgccgacgca 84 |||||||||||||||||||| Sbjct: 33625563 ccgccgccgccgccgacgca 33625544 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 51 cgccgcctcctcacccgccgccgccgcc 78 ||||||| || ||||||||||||||||| Sbjct: 33382099 cgccgccgccacacccgccgccgccgcc 33382126 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 cacccgccgccgccgccgac 81 |||||||||||||||||||| Sbjct: 33108350 cacccgccgccgccgccgac 33108369 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 cctcccctcctcctctcccc 43 |||||||||||||||||||| Sbjct: 33102221 cctcccctcctcctctcccc 33102202 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 375 gccgccgacgccgccgccgtcgcg 398 ||||||| |||||||||||||||| Sbjct: 31962614 gccgccgccgccgccgccgtcgcg 31962591 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 cccgccgccgccgccgacgc 83 |||||||||||||||||||| Sbjct: 25412275 cccgccgccgccgccgacgc 25412294 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 375 gccgccgacgccgccgccgtcgcg 398 ||||||| |||||||||||||||| Sbjct: 23994070 gccgccgccgccgccgccgtcgcg 23994093 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 ccgccgccgccgccgacgcaccgc 88 ||||||||||||||||||| |||| Sbjct: 23832108 ccgccgccgccgccgacgccccgc 23832085 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 cctcctcacccgccgccgccgccg 79 ||||||| |||||||||||||||| Sbjct: 23336960 cctcctcccccgccgccgccgccg 23336983 Score = 40.1 bits (20), Expect = 6.1 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 375 gccgccgacgccgccgccgtcg-cggaggagg 405 ||||||| |||||||||||||| ||||||||| Sbjct: 21395710 gccgccgccgccgccgccgtcgccggaggagg 21395741 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 62 cacccgccgccgccgccgacgcac 85 |||||||||||||||||| ||||| Sbjct: 18068760 cacccgccgccgccgccgccgcac 18068737 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 57 ctcctcacccgccgccgccgccga 80 |||||| ||||||||||||||||| Sbjct: 4409027 ctcctctcccgccgccgccgccga 4409050 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 373 ctgccgccgacgccgccgccgtcg 396 ||||||||| |||||||||||||| Sbjct: 1041794 ctgccgccgccgccgccgccgtcg 1041817 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 375 gccgccgacgccgccgccgtcgcg 398 ||||||| |||||||||||||||| Sbjct: 584901 gccgccgccgccgccgccgtcgcg 584924
>gb|AC154312.2| Mus musculus BAC clone RP23-354D20 from chromosome 16, complete sequence Length = 197884 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 50370 tcttcttctcctccttctcctcctcc 50345
>gb|AC157212.2| Mus musculus BAC clone RP23-171A13 from chromosome 14, complete sequence Length = 217099 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 25711 tcttcttctcctccttctcctcctcc 25686
>gb|AC154626.2| Mus musculus BAC clone RP23-311B8 from chromosome 14, complete sequence Length = 194638 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 217 tcttcttctcctccgtctcctcctcc 242 ||||||||||||| |||||||||||| Sbjct: 15322 tcttcttctcctctgtctcctcctcc 15347
>gb|AC154681.2| Mus musculus BAC clone RP24-314G22 from chromosome 14, complete sequence Length = 193716 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 217 tcttcttctcctccgtctcctcctcc 242 ||||||||||||| |||||||||||| Sbjct: 29116 tcttcttctcctctgtctcctcctcc 29091
>gb|AC011518.6|AC011518 Homo sapiens chromosome 19 clone LLNLF-189G12, complete sequence Length = 39344 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 10862 tcttcttctcctccttctcctcctcc 10837
>gb|AF490843.1| Homo sapiens clone PAC 70L19, HOXC gene cluster Length = 152740 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 51 cgccgcctcctcacccgccgccgccgccga 80 |||||||||||| |||||||||||||||| Sbjct: 16831 cgccgcctcctcctccgccgccgccgccga 16802
>dbj|AP003416.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0456E05 Length = 173699 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 58 tcctcacccgccgccgccgccg 79 |||||||||||||||||||||| Sbjct: 161391 tcctcacccgccgccgccgccg 161370
>dbj|AP002484.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0489A01 Length = 137174 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 224 ctcctccgtctcctcctccccgccgc 249 ||||||| |||||||||||||||||| Sbjct: 108558 ctcctccttctcctcctccccgccgc 108583
>gb|AC004950.2|AC004950 Homo sapiens PAC clone RP5-1019E5 from CH1, complete sequence Length = 93615 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 214 ccctcttcttctcctccgtctcctcctccc 243 |||||| |||||||||| |||||||||||| Sbjct: 81964 ccctctccttctcctccttctcctcctccc 81935 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 221 cttctcctccgtctcctcctcccc 244 |||||||||| ||||||||||||| Sbjct: 81985 cttctcctccttctcctcctcccc 81962 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 221 cttctcctccgtctcctcctcccc 244 |||||||||| ||||||||||||| Sbjct: 81851 cttctcctccttctcctcctcccc 81828
>gb|AC012531.11|AC012531 Homo sapiens, clone RP11-83K1, complete sequence Length = 171949 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 51 cgccgcctcctcacccgccgccgccgccga 80 |||||||||||| |||||||||||||||| Sbjct: 76622 cgccgcctcctcctccgccgccgccgccga 76593
>gb|AC120045.19| Homo sapiens chromosome 15, clone RP11-932O9, complete sequence Length = 188596 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 22103 tcttcttctcctccttctcctcctcc 22128
>gb|AC114480.2| Homo sapiens chromosome 3 clone RP11-755B10, complete sequence Length = 196773 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 215 cctcttcttctcctccgtctcctcctcccc 244 ||||||||||| |||| ||||||||||||| Sbjct: 53548 cctcttcttcttctccttctcctcctcccc 53519
>ref|NM_003334.2| Homo sapiens ubiquitin-activating enzyme E1 (A1S9T and BN75 temperature sensitivity complementing) (UBE1), transcript variant 1, mRNA Length = 3504 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 224 ctcctccgtctcctcctccccgccgc 249 ||||||| |||||||||||||||||| Sbjct: 60 ctcctccttctcctcctccccgccgc 35
>gb|AC134237.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0090O10, complete sequence Length = 162132 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 57 ctcctcacccgccgccgccgccgacgcacc 86 |||||| |||||||||||||||| |||||| Sbjct: 10102 ctcctctcccgccgccgccgccgccgcacc 10131
>gb|AF274573.4| Homo sapiens chromosome X clone RP11-316K19, RP11-316M19, RP4-687A5 map q28, complete sequence Length = 189436 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 69007 tcttcttctcctccttctcctcctcc 68982
>gb|AC121490.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0005F16, complete sequence Length = 160053 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 57 ctcctcacccgccgccgccgccgacgcacc 86 |||||| |||||||||||||||| |||||| Sbjct: 100438 ctcctctcccgccgccgccgccgccgcacc 100467
>gb|AF263466.2|AF263466 Homo sapiens HOXC13 (HOXC13) mRNA, complete cds Length = 2391 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 51 cgccgcctcctcacccgccgccgccgccga 80 |||||||||||| |||||||||||||||| Sbjct: 184 cgccgcctcctcctccgccgccgccgccga 155
>gb|AF216493.1|AF216493 Homo sapiens a-helical protein (HCR) mRNA, complete cds Length = 2445 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 11 ccagctcccgctgcctcccctc 32 |||||||||||||||||||||| Sbjct: 449 ccagctcccgctgcctcccctc 428
>dbj|BA000025.2| Homo sapiens genomic DNA, chromosome 6p21.3, HLA Class I region Length = 2229817 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 11 ccagctcccgctgcctcccctc 32 |||||||||||||||||||||| Sbjct: 787555 ccagctcccgctgcctcccctc 787534
>dbj|AP003276.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0516D04 Length = 140491 Score = 44.1 bits (22), Expect = 0.39 Identities = 33/36 (91%), Gaps = 3/36 (8%) Strand = Plus / Minus Query: 47 ccgtcgccgcctcc---tcacccgccgccgccgccg 79 |||||||||||||| ||||||||||||||||||| Sbjct: 69472 ccgtcgccgcctccgcgtcacccgccgccgccgccg 69437
>gb|AC011456.2|AC011456 Homo sapiens chromosome 19 clone CTC-360P9, complete sequence Length = 156357 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 10337 tcttcttctcctccttctcctcctcc 10312 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 10166 tcttcttctcctccttctcctcctcc 10141
>dbj|AP003767.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0036F10 Length = 149415 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 cgccgcctcctcacccgccgccgccgccga 80 ||||||| | |||||||||||||||||||| Sbjct: 67548 cgccgccccatcacccgccgccgccgccga 67577
>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0028E05 Length = 157631 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 62 cacccgccgccgccgccgacgcaccg 87 |||||||||||||||||| ||||||| Sbjct: 63227 cacccgccgccgccgccggcgcaccg 63202
>dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0622F03 Length = 170064 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 62 cacccgccgccgccgccgacgcaccg 87 |||||||||||||||||| ||||||| Sbjct: 156018 cacccgccgccgccgccggcgcaccg 155993
>dbj|AP003573.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0523F01 Length = 146419 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 376 ccgccgacgccgccgccgtcgc 397 |||||||||||||||||||||| Sbjct: 97729 ccgccgacgccgccgccgtcgc 97750 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 375 gccgccgacgccgccgccgtcgcgg 399 ||||||||||||||||||| ||||| Sbjct: 10900 gccgccgacgccgccgccgccgcgg 10924
>dbj|AP003571.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0458E02 Length = 154458 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 376 ccgccgacgccgccgccgtcgc 397 |||||||||||||||||||||| Sbjct: 2857 ccgccgacgccgccgccgtcgc 2878
>dbj|AP004230.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ2013_G04 Length = 73667 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 377 cgccgacgccgccgccgtcgcggagg 402 ||||||||||||||||||||| |||| Sbjct: 51676 cgccgacgccgccgccgtcgccgagg 51701
>gb|AY892121.1| Synthetic construct Homo sapiens clone FLH013580.01L homeobox C13 (HOXC13) mRNA, partial cds Length = 993 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 51 cgccgcctcctcacccgccgccgccgccga 80 |||||||||||| |||||||||||||||| Sbjct: 112 cgccgcctcctcctccgccgccgccgccga 83
>gb|AY892120.1| Synthetic construct Homo sapiens clone FLH013579.01L homeobox C13 (HOXC13) mRNA, partial cds Length = 993 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 51 cgccgcctcctcacccgccgccgccgccga 80 |||||||||||| |||||||||||||||| Sbjct: 112 cgccgcctcctcctccgccgccgccgccga 83
>gb|AY889662.1| Synthetic construct Homo sapiens clone FLH013584.01X homeobox C13 (HOXC13) mRNA, complete cds Length = 993 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 51 cgccgcctcctcacccgccgccgccgccga 80 |||||||||||| |||||||||||||||| Sbjct: 112 cgccgcctcctcctccgccgccgccgccga 83
>dbj|BS000016.1| Pan troglodytes chromosome 22 clone:PTB-066F21, map 22, complete sequences Length = 148564 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 64404 tcttcttctcctccttctcctcctcc 64429
>dbj|AP003875.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1119_C05 Length = 126112 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 54 cgcctcctcacccgccgccgccgccg 79 ||||||||| |||||||||||||||| Sbjct: 75816 cgcctcctctcccgccgccgccgccg 75841
>dbj|AP005647.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0026E05 Length = 159860 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 58 tcctcacccgccgccgccgccg 79 |||||||||||||||||||||| Sbjct: 28712 tcctcacccgccgccgccgccg 28733
>dbj|AP005474.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0081C13 Length = 144624 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 58 tcctcacccgccgccgccgccg 79 |||||||||||||||||||||| Sbjct: 118065 tcctcacccgccgccgccgccg 118086
>dbj|AP004702.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0524F03 Length = 167696 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 375 gccgccgacgccgccgccgtcgcgga 400 ||||||||||||||||||| |||||| Sbjct: 86237 gccgccgacgccgccgccgccgcgga 86212
>dbj|AP004689.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0434E03 Length = 142414 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 376 ccgccgacgccgccgccgtcgcggaggagg 405 |||||| |||||||||||| |||||||||| Sbjct: 107889 ccgccgccgccgccgccgtggcggaggagg 107918
>dbj|AK120787.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023011G24, full insert sequence Length = 1875 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 376 ccgccgacgccgccgccgtcgcggaggagg 405 |||||| |||||||||||| |||||||||| Sbjct: 343 ccgccgccgccgccgccgtggcggaggagg 372
>dbj|AK108500.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-143-H03, full insert sequence Length = 1036 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 376 ccgccgacgccgccgccgtcgc 397 |||||||||||||||||||||| Sbjct: 189 ccgccgacgccgccgccgtcgc 168
>gb|AC134788.10| Mus musculus chromosome 1, clone RP24-482A14, complete sequence Length = 157535 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 154469 tcttcttctcctccttctcctcctcc 154444
>dbj|AK102764.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107D20, full insert sequence Length = 2106 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 54 cgcctcctcacccgccgccgccgccg 79 ||||||||| |||||||||||||||| Sbjct: 79 cgcctcctctcccgccgccgccgccg 104
>dbj|AK101052.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033012O18, full insert sequence Length = 1687 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 51 cgccgcctcctcacccgccgccgccgccga 80 ||||||| | |||||||||||||||||||| Sbjct: 281 cgccgccccatcacccgccgccgccgccga 252
>dbj|AK071240.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023085O10, full insert sequence Length = 809 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 224 ctcctccgtctcctcctccccgccgc 249 ||||||| |||||||||||||||||| Sbjct: 403 ctcctccttctcctcctccccgccgc 378
>emb|AL163208.2|HS21C008 Homo sapiens chromosome 21 segment HS21C008 Length = 340000 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 272548 tcttcttctcctccttctcctcctcc 272573
>dbj|AK068779.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013158G10, full insert sequence Length = 1281 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 57 ctcctcacccgccgccgccgccgacgcacc 86 |||||| |||||||||||||||| |||||| Sbjct: 17 ctcctctcccgccgccgccgccgccgcacc 46
>emb|AL359400.4|CNS05TEW Human chromosome 14 DNA sequence BAC R-114L12 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 175668 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 215 cctcttcttctcctccgtctcctcctcccc 244 |||||||||||||||| |||||||||||| Sbjct: 164736 cctcttcttctcctcctcctcctcctcccc 164765
>dbj|AK066124.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013057I21, full insert sequence Length = 1284 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 57 ctcctcacccgccgccgccgccgacgcacc 86 |||||| |||||||||||||||| |||||| Sbjct: 29 ctcctctcccgccgccgccgccgccgcacc 58
>dbj|AK064336.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-G10, full insert sequence Length = 2123 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 54 cgcctcctcacccgccgccgccgccg 79 ||||||||| |||||||||||||||| Sbjct: 76 cgcctcctctcccgccgccgccgccg 101
>dbj|AK059171.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-F01, full insert sequence Length = 1605 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 54 cgcctcctcacccgccgccgccgccg 79 ||||||||| |||||||||||||||| Sbjct: 194 cgcctcctcccccgccgccgccgccg 169
>gb|AC137976.13| Mus musculus chromosome 8, clone RP23-262K12, complete sequence Length = 238720 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 179377 tcttcttctcctccttctcctcctcc 179352
>gb|AC102730.15| Mus musculus chromosome 5, clone RP24-194J15, complete sequence Length = 167135 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 135603 tcttcttctcctccttctcctcctcc 135628
>gb|AC117831.6| Mus musculus chromosome 15, clone RP24-106E17, complete sequence Length = 173772 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 61083 tcttcttctcctccttctcctcctcc 61108
>gb|AF111168.2|AF111168 Homo sapiens serine palmitoyl transferase, subunit II gene, complete cds; and unknown genes Length = 231464 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 134032 tcttcttctcctccttctcctcctcc 134057
>gb|AF130248.1|AF130248 Homo sapiens clone 10J13 chromosome 21 map 21q11.2, complete sequence Length = 137074 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 58745 tcttcttctcctccttctcctcctcc 58770
>emb|AL110118.7|CNS018P3 Human chromosome 14 DNA sequence BAC R-371E8 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 192265 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 58 tcctcacccgccgccgccgccg 79 |||||||||||||||||||||| Sbjct: 107029 tcctcacccgccgccgccgccg 107008
>gb|AC006241.1|AC006241 Homo sapiens chromosome 9, clone hRPK.202_H_3, complete sequence Length = 187174 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 233 ctcctcctccccgccgctccac 254 |||||||||||||||||||||| Sbjct: 26336 ctcctcctccccgccgctccac 26357
>gb|AC115740.8| Mus musculus chromosome 3, clone RP23-476G18, complete sequence Length = 226125 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 60700 tcttcttctcctccttctcctcctcc 60675
>gb|AC108782.9| Mus musculus chromosome 8, clone RP23-350C11, complete sequence Length = 221428 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 57645 tcttcttctcctccttctcctcctcc 57620
>gb|AC121101.8| Mus musculus chromosome 8, clone RP24-511A8, complete sequence Length = 158957 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 58750 tcttcttctcctccctctcctcctcc 58725
>gb|AC004195.1|AC004195 Homo sapiens clone UWGC:y24c027 from 6p21, complete sequence Length = 40878 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 11 ccagctcccgctgcctcccctc 32 |||||||||||||||||||||| Sbjct: 10896 ccagctcccgctgcctcccctc 10875
>gb|BC090850.1| Homo sapiens homeobox C13, mRNA (cDNA clone MGC:102689 IMAGE:6171228), complete cds Length = 2379 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 51 cgccgcctcctcacccgccgccgccgccga 80 |||||||||||| |||||||||||||||| Sbjct: 196 cgccgcctcctcctccgccgccgccgccga 167
>gb|BC002754.1| Homo sapiens homeobox C13, mRNA (cDNA clone MGC:3334 IMAGE:3629265), complete cds Length = 2315 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 51 cgccgcctcctcacccgccgccgccgccga 80 |||||||||||| |||||||||||||||| Sbjct: 174 cgccgcctcctcctccgccgccgccgccga 145
>emb|AL596265.12| Mouse DNA sequence from clone RP23-134O19 on chromosome 12, complete sequence Length = 205332 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 84895 tcttcttctcctccttctcctcctcc 84870 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 84744 tcttcttctcctccttctcctcctcc 84719 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 217 tcttcttctcctccgtctcctcctcc 242 |||||||||||||| ||||||||||| Sbjct: 84690 tcttcttctcctccttctcctcctcc 84665
>dbj|AB088104.1| Homo sapiens HCR gene for tricohyalin homologue, complete cds Length = 15814 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 11 ccagctcccgctgcctcccctc 32 |||||||||||||||||||||| Sbjct: 3369 ccagctcccgctgcctcccctc 3348
>ref|NM_017410.2| Homo sapiens homeobox C13 (HOXC13), mRNA Length = 2435 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 51 cgccgcctcctcacccgccgccgccgccga 80 |||||||||||| |||||||||||||||| Sbjct: 227 cgccgcctcctcctccgccgccgccgccga 198
>gb|BC110534.1| Homo sapiens coiled-coil alpha-helical rod protein 1, mRNA (cDNA clone MGC:126371 IMAGE:40035162), complete cds Length = 2588 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 11 ccagctcccgctgcctcccctc 32 |||||||||||||||||||||| Sbjct: 671 ccagctcccgctgcctcccctc 650 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,355,140 Number of Sequences: 3902068 Number of extensions: 5355140 Number of successful extensions: 418444 Number of sequences better than 10.0: 1209 Number of HSP's better than 10.0 without gapping: 1265 Number of HSP's successfully gapped in prelim test: 13 Number of HSP's that attempted gapping in prelim test: 340517 Number of HSP's gapped (non-prelim): 77081 length of query: 454 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 432 effective length of database: 17,147,199,772 effective search space: 7407590301504 effective search space used: 7407590301504 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
